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Editing gene: APOBEC3C (CAeditome ID:27350)

Gene summary for APOBEC3C

Gene summary

Gene information	Gene symbol	APOBEC3C
	Gene ID	27350
	Gene name	apolipoprotein B mRNA editing enzyme catalytic subunit 3C
	Synonyms	A3C\|APOBEC1L\|ARDC2\|ARDC4\|ARP5\|PBI\|bK150C2.3
	Cytomap	22q13.1
	Type of gene	protein-coding
	Description	DNA dC->dU-editing enzyme APOBEC-3Capolipoprotein B editing enzyme catalytic polypeptide-like 3Capolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Cphorbolin Iprobable DNA dC->dU-editing enzyme APOBEC-3C
	Modification date	20210518
	UniProtAcc	Q9NRW3
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
APOBEC3C	GO:0009972	DNA dC->dU-editing enzyme APOBEC-3C	21632763
APOBEC3C	GO:0010529	DNA dC->dU-editing enzyme APOBEC-3C	16527742
APOBEC3C	GO:0010529	DNA dC->dU-editing enzyme APOBEC-3C	20062055
APOBEC3C	GO:0045071	DNA dC->dU-editing enzyme APOBEC-3C	21632763
APOBEC3C	GO:0080111	DNA dC->dU-editing enzyme APOBEC-3C	21496894
APOBEC3C	GO:0005634	DNA dC->dU-editing enzyme APOBEC-3C	21835787
APOBEC3C	GO:0005737	DNA dC->dU-editing enzyme APOBEC-3C	21835787

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RNA A-to-I events for APOBEC3C

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000244509.3

RNA A-to-I editing events in Cancer.

CAediting_1482518(39018697, +), CAediting_1482519(39018706, +), CAediting_1482520(39018724, +), CAediting_1482521(39018743, +), CAediting_1482522(39018747, +), CAediting_1482523(39018748, +), CAediting_1482524(39018749, +), CAediting_1482525(39018756, +), CAediting_1482526(39018759, +), CAediting_1482527(39018767, +), CAediting_1482528(39018775, +), CAediting_1482529(39018796, +), CAediting_1482530(39018803, +), CAediting_1482531(39018817, +), CAediting_1482532(39018819, +), CAediting_1482533(39018820, +), CAediting_1482534(39018821, +), CAediting_1482535(39018822, +), CAediting_1482536(39018823, +), CAediting_1482537(39018836, +), CAediting_1482538(39018837, +), CAediting_1482539(39018845, +), CAediting_1482540(39018849, +), CAediting_1482541(39018851, +), CAediting_1482542(39018871, +), CAediting_1482543(39018876, +), CAediting_1482544(39018877, +), CAediting_1482545(39018881, +), CAediting_1482546(39018894, +), CAediting_1482547(39018895, +), CAediting_1482548(39018907, +), CAediting_1482549(39018912, +), CAediting_1482550(39018918, +), CAediting_1482551(39018920, +), CAediting_1482552(39018933, +), CAediting_1482553(39018937, +), CAediting_1482554(39018976, +), CAediting_1482555(39019824, +), CAediting_1482556(39019826, +), CAediting_1482557(39019828, +), CAediting_1482558(39019849, +), CAediting_1482559(39019857, +), CAediting_1482560(39019869, +), CAediting_1482561(39019870, +), CAediting_1482562(39019876, +), CAediting_1482563(39019880, +), CAediting_1482564(39019885, +), CAediting_1482565(39019886, +), CAediting_1482566(39019910, +), CAediting_1482567(39019923, +), CAediting_1482568(39019935, +), CAediting_1482569(39019954, +), CAediting_1482570(39019976, +), CAediting_1482571(39019993, +), CAediting_1482572(39020005, +), CAediting_1482573(39020017, +), CAediting_1482574(39020018, +), CAediting_1482575(39020048, +), CAediting_1482576(39020058, +), CAediting_1482577(39020067, +), CAediting_1482578(39020070, +), CAediting_1482579(39020072, +), CAediting_1482580(39020083, +),

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RNA editing positional annotations for APOBEC3C using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1482518	chr22_39018697_+	UTR3
CAediting_1482519	chr22_39018706_+	UTR3
CAediting_1482520	chr22_39018724_+	UTR3
CAediting_1482521	chr22_39018743_+	UTR3
CAediting_1482522	chr22_39018747_+	UTR3
CAediting_1482523	chr22_39018748_+	UTR3
CAediting_1482524	chr22_39018749_+	UTR3
CAediting_1482525	chr22_39018756_+	UTR3
CAediting_1482526	chr22_39018759_+	UTR3
CAediting_1482527	chr22_39018767_+	UTR3
CAediting_1482528	chr22_39018775_+	UTR3
CAediting_1482529	chr22_39018796_+	UTR3
CAediting_1482530	chr22_39018803_+	UTR3
CAediting_1482531	chr22_39018817_+	UTR3
CAediting_1482532	chr22_39018819_+	UTR3
CAediting_1482533	chr22_39018820_+	UTR3
CAediting_1482534	chr22_39018821_+	UTR3
CAediting_1482535	chr22_39018822_+	UTR3
CAediting_1482536	chr22_39018823_+	UTR3
CAediting_1482537	chr22_39018836_+	UTR3
CAediting_1482538	chr22_39018837_+	UTR3
CAediting_1482539	chr22_39018845_+	UTR3
CAediting_1482540	chr22_39018849_+	UTR3
CAediting_1482541	chr22_39018851_+	UTR3
CAediting_1482542	chr22_39018871_+	UTR3
CAediting_1482543	chr22_39018876_+	UTR3
CAediting_1482544	chr22_39018877_+	UTR3
CAediting_1482545	chr22_39018881_+	UTR3
CAediting_1482546	chr22_39018894_+	UTR3
CAediting_1482547	chr22_39018895_+	UTR3
CAediting_1482548	chr22_39018907_+	UTR3
CAediting_1482549	chr22_39018912_+	UTR3
CAediting_1482550	chr22_39018918_+	UTR3
CAediting_1482551	chr22_39018920_+	UTR3
CAediting_1482552	chr22_39018933_+	UTR3
CAediting_1482553	chr22_39018937_+	UTR3
CAediting_1482554	chr22_39018976_+	UTR3
CAediting_1482555	chr22_39019824_+	UTR3
CAediting_1482556	chr22_39019826_+	UTR3
CAediting_1482557	chr22_39019828_+	UTR3
CAediting_1482558	chr22_39019849_+	UTR3
CAediting_1482559	chr22_39019857_+	UTR3
CAediting_1482560	chr22_39019869_+	UTR3
CAediting_1482561	chr22_39019870_+	UTR3
CAediting_1482562	chr22_39019876_+	UTR3
CAediting_1482563	chr22_39019880_+	UTR3
CAediting_1482564	chr22_39019885_+	UTR3
CAediting_1482565	chr22_39019886_+	UTR3
CAediting_1482566	chr22_39019910_+	UTR3
CAediting_1482567	chr22_39019923_+	UTR3
CAediting_1482568	chr22_39019935_+	UTR3
CAediting_1482569	chr22_39019954_+	UTR3
CAediting_1482570	chr22_39019976_+	UTR3
CAediting_1482571	chr22_39019993_+	UTR3
CAediting_1482572	chr22_39020005_+	UTR3
CAediting_1482573	chr22_39020017_+	UTR3
CAediting_1482574	chr22_39020018_+	UTR3
CAediting_1482575	chr22_39020048_+	UTR3
CAediting_1482576	chr22_39020058_+	UTR3
CAediting_1482577	chr22_39020067_+	UTR3
CAediting_1482578	chr22_39020070_+	UTR3
CAediting_1482579	chr22_39020072_+	UTR3
CAediting_1482580	chr22_39020083_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1482519	chr22_39018706_+	SINE	Alu	AluJb
CAediting_1482520	chr22_39018724_+	SINE	Alu	AluJb
CAediting_1482521	chr22_39018743_+	SINE	Alu	AluJb
CAediting_1482522	chr22_39018747_+	SINE	Alu	AluJb
CAediting_1482523	chr22_39018748_+	SINE	Alu	AluJb
CAediting_1482524	chr22_39018749_+	SINE	Alu	AluJb
CAediting_1482525	chr22_39018756_+	SINE	Alu	AluJb
CAediting_1482526	chr22_39018759_+	SINE	Alu	AluJb
CAediting_1482527	chr22_39018767_+	SINE	Alu	AluJb
CAediting_1482528	chr22_39018775_+	SINE	Alu	AluJb
CAediting_1482529	chr22_39018796_+	SINE	Alu	AluJb
CAediting_1482530	chr22_39018803_+	SINE	Alu	AluJb
CAediting_1482531	chr22_39018817_+	SINE	Alu	AluJb
CAediting_1482532	chr22_39018819_+	SINE	Alu	AluJb
CAediting_1482533	chr22_39018820_+	SINE	Alu	AluJb
CAediting_1482534	chr22_39018821_+	SINE	Alu	AluJb
CAediting_1482535	chr22_39018822_+	SINE	Alu	AluJb
CAediting_1482536	chr22_39018823_+	SINE	Alu	AluJb
CAediting_1482537	chr22_39018836_+	SINE	Alu	AluJb
CAediting_1482538	chr22_39018837_+	SINE	Alu	AluJb
CAediting_1482539	chr22_39018845_+	SINE	Alu	AluJb
CAediting_1482540	chr22_39018849_+	SINE	Alu	AluJb
CAediting_1482541	chr22_39018851_+	SINE	Alu	AluJb
CAediting_1482542	chr22_39018871_+	SINE	Alu	AluJb
CAediting_1482543	chr22_39018876_+	SINE	Alu	AluJb
CAediting_1482544	chr22_39018877_+	SINE	Alu	AluJb
CAediting_1482545	chr22_39018881_+	SINE	Alu	AluJb
CAediting_1482546	chr22_39018894_+	SINE	Alu	AluJb
CAediting_1482547	chr22_39018895_+	SINE	Alu	AluJb
CAediting_1482548	chr22_39018907_+	SINE	Alu	AluJb
CAediting_1482549	chr22_39018912_+	SINE	Alu	AluJb
CAediting_1482550	chr22_39018918_+	SINE	Alu	AluJb
CAediting_1482551	chr22_39018920_+	SINE	Alu	AluJb
CAediting_1482552	chr22_39018933_+	SINE	Alu	AluJb
CAediting_1482553	chr22_39018937_+	SINE	Alu	AluJb
CAediting_1482554	chr22_39018976_+	SINE	Alu	AluJb
CAediting_1482555	chr22_39019824_+	SINE	Alu	AluSq2
CAediting_1482556	chr22_39019826_+	SINE	Alu	AluSq2
CAediting_1482557	chr22_39019828_+	SINE	Alu	AluSq2
CAediting_1482558	chr22_39019849_+	SINE	Alu	AluSq2
CAediting_1482559	chr22_39019857_+	SINE	Alu	AluSq2
CAediting_1482560	chr22_39019869_+	SINE	Alu	AluSq2
CAediting_1482561	chr22_39019870_+	SINE	Alu	AluSq2
CAediting_1482562	chr22_39019876_+	SINE	Alu	AluSq2
CAediting_1482563	chr22_39019880_+	SINE	Alu	AluSq2
CAediting_1482564	chr22_39019885_+	SINE	Alu	AluSq2
CAediting_1482565	chr22_39019886_+	SINE	Alu	AluSq2
CAediting_1482566	chr22_39019910_+	SINE	Alu	AluSq2
CAediting_1482567	chr22_39019923_+	SINE	Alu	AluSq2
CAediting_1482568	chr22_39019935_+	SINE	Alu	AluSq2
CAediting_1482569	chr22_39019954_+	SINE	Alu	AluSq2
CAediting_1482570	chr22_39019976_+	SINE	Alu	AluSq2
CAediting_1482571	chr22_39019993_+	SINE	Alu	AluSq2
CAediting_1482572	chr22_39020005_+	SINE	Alu	AluSq2
CAediting_1482573	chr22_39020017_+	SINE	Alu	AluSq2
CAediting_1482574	chr22_39020018_+	SINE	Alu	AluSq2
CAediting_1482575	chr22_39020048_+	SINE	Alu	AluSq2
CAediting_1482576	chr22_39020058_+	SINE	Alu	AluSq2
CAediting_1482577	chr22_39020067_+	SINE	Alu	AluSq2
CAediting_1482578	chr22_39020070_+	SINE	Alu	AluSq2
CAediting_1482579	chr22_39020072_+	SINE	Alu	AluSq2
CAediting_1482580	chr22_39020083_+	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for APOBEC3C

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000244509.3.APOBEC3C.

Correlation between RNA A-to-I editing and PSI for ENSG00000244509.3.APOBEC3C.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for APOBEC3C

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for APOBEC3C

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for APOBEC3C

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1482518	chr22_39018697_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4690-3p	39018695	39018701	7mer-m8	39018681	39018702	153.00	-21.65
CAediting_1482518	chr22_39018697_+	ENSG00000244509.3	ENST00000361441	hsa-miR-5685	39018695	39018701	7mer-m8	39018681	39018702	147.00	-17.91
CAediting_1482518	chr22_39018697_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6840-3p	39018692	39018698	7mer-m8	39018678	39018699	140.00	-19.36
CAediting_1482518	chr22_39018697_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4690-3p	39018695	39018701	7mer-m8	39018681	39018702	153.00	-21.65
CAediting_1482518	chr22_39018697_+	ENSG00000244509.3	ENST00000428892	hsa-miR-5685	39018695	39018701	7mer-m8	39018681	39018702	147.00	-17.91
CAediting_1482518	chr22_39018697_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6840-3p	39018692	39018698	7mer-m8	39018678	39018699	140.00	-19.36
CAediting_1482523	chr22_39018748_+	ENSG00000244509.3	ENST00000361441	hsa-miR-5001-3p	39018742	39018748	7mer-m8	39018731	39018749	150.00	-21.25
CAediting_1482523	chr22_39018748_+	ENSG00000244509.3	ENST00000428892	hsa-miR-5001-3p	39018742	39018748	7mer-m8	39018731	39018749	150.00	-21.25
CAediting_1482524	chr22_39018749_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1915-5p	39018743	39018749	7mer-m8	39018725	39018750	151.00	-24.35
CAediting_1482524	chr22_39018749_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6780b-3p	39018745	39018750	6mer	39018731	39018751	145.00	-23.16
CAediting_1482524	chr22_39018749_+	ENSG00000244509.3	ENST00000428892	hsa-miR-1915-5p	39018743	39018749	7mer-m8	39018725	39018750	151.00	-24.35
CAediting_1482524	chr22_39018749_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6780b-3p	39018745	39018750	6mer	39018731	39018751	145.00	-23.16
CAediting_1482526	chr22_39018759_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4431	39018755	39018761	7mer-m8	39018741	39018762	143.00	-16.06
CAediting_1482526	chr22_39018759_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6845-3p	39018753	39018758	6mer	39018739	39018759	155.00	-26.87
CAediting_1482526	chr22_39018759_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4431	39018755	39018761	7mer-m8	39018741	39018762	143.00	-16.06
CAediting_1482526	chr22_39018759_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6845-3p	39018753	39018758	6mer	39018739	39018759	155.00	-26.87
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6724-5p	39018765	39018771	7mer-m8	39018751	39018772	153.00	-31.11
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6724-5p	39018765	39018771	7mer-m8	39018751	39018772	153.00	-31.11
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6724-5p	39018765	39018771	7mer-m8	39018751	39018772	153.00	-31.11
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6724-5p	39018765	39018771	7mer-m8	39018751	39018772	153.00	-31.11
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6773-5p	39018765	39018771	7mer-m8	39018750	39018772	149.00	-20.80
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6724-5p	39018765	39018771	7mer-m8	39018751	39018772	153.00	-31.11
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6724-5p	39018765	39018771	7mer-m8	39018751	39018772	153.00	-31.11
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6724-5p	39018765	39018771	7mer-m8	39018751	39018772	153.00	-31.11
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6724-5p	39018765	39018771	7mer-m8	39018751	39018772	153.00	-31.11
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6773-5p	39018765	39018771	7mer-m8	39018750	39018772	149.00	-20.80
CAediting_1482542	chr22_39018871_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4776-5p	39018869	39018876	8mer-1a	39018855	39018876	155.00	-20.86
CAediting_1482542	chr22_39018871_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4776-5p	39018869	39018876	8mer-1a	39018855	39018876	155.00	-20.86
CAediting_1482542	chr22_39018871_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4776-5p	39018869	39018876	8mer-1a	39018855	39018876	155.00	-20.86
CAediting_1482542	chr22_39018871_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4776-5p	39018869	39018876	8mer-1a	39018855	39018876	155.00	-20.86
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3116	39018872	39018878	7mer-m8	39018858	39018879	150.00	-18.07
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3116	39018872	39018878	7mer-m8	39018858	39018879	150.00	-18.07
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378a-3p	39018870	39018876	7mer-m8	39018855	39018877	147.00	-16.50
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378b	39018870	39018876	7mer-m8	39018858	39018877	155.00	-16.25
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378c	39018870	39018876	7mer-m8	39018852	39018877	147.00	-18.22
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378d	39018870	39018876	7mer-m8	39018857	39018877	147.00	-15.32
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378d	39018870	39018876	7mer-m8	39018857	39018877	147.00	-15.32
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378e	39018870	39018876	7mer-m8	39018858	39018877	147.00	-15.40
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378f	39018870	39018876	7mer-m8	39018857	39018877	147.00	-15.09
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378h	39018870	39018876	7mer-m8	39018855	39018877	141.00	-20.55
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-378i	39018870	39018876	7mer-m8	39018856	39018877	151.00	-16.13
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-422a	39018870	39018876	7mer-m8	39018855	39018877	147.00	-17.96
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3116	39018872	39018878	7mer-m8	39018858	39018879	150.00	-18.07
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3116	39018872	39018878	7mer-m8	39018858	39018879	150.00	-18.07
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378a-3p	39018870	39018876	7mer-m8	39018855	39018877	147.00	-16.50
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378b	39018870	39018876	7mer-m8	39018858	39018877	155.00	-16.25
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378c	39018870	39018876	7mer-m8	39018852	39018877	147.00	-18.22
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378d	39018870	39018876	7mer-m8	39018857	39018877	147.00	-15.32
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378d	39018870	39018876	7mer-m8	39018857	39018877	147.00	-15.32
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378e	39018870	39018876	7mer-m8	39018858	39018877	147.00	-15.40
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378f	39018870	39018876	7mer-m8	39018857	39018877	147.00	-15.09
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378h	39018870	39018876	7mer-m8	39018855	39018877	141.00	-20.55
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-378i	39018870	39018876	7mer-m8	39018856	39018877	151.00	-16.13
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-422a	39018870	39018876	7mer-m8	39018855	39018877	147.00	-17.96
CAediting_1482547	chr22_39018895_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1224-3p	39018893	39018900	8mer-1a	39018881	39018900	156.00	-26.70
CAediting_1482547	chr22_39018895_+	ENSG00000244509.3	ENST00000428892	hsa-miR-1224-3p	39018893	39018900	8mer-1a	39018881	39018900	156.00	-26.70
CAediting_1482559	chr22_39019857_+	ENSG00000244509.3	ENST00000361441	hsa-miR-508-5p	39019851	39019857	7mer-m8	39019834	39019858	141.00	-20.66
CAediting_1482559	chr22_39019857_+	ENSG00000244509.3	ENST00000361441	hsa-miR-766-3p	39019850	39019856	7mer-m8	39019835	39019857	146.00	-21.73
CAediting_1482559	chr22_39019857_+	ENSG00000244509.3	ENST00000361441	hsa-miR-7703	39019854	39019861	8mer-1a	39019839	39019861	162.00	-27.39
CAediting_1482561	chr22_39019870_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4494	39019867	39019873	7mer-m8	39019853	39019874	152.00	-22.27
CAediting_1482561	chr22_39019870_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6529-3p	39019863	39019869	7mer-m8	39019849	39019870	154.00	-13.31
CAediting_1482561	chr22_39019870_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6889-3p	39019863	39019869	7mer-m8	39019850	39019870	152.00	-19.80
CAediting_1482561	chr22_39019870_+	ENSG00000244509.3	ENST00000361441	hsa-miR-7157-3p	39019864	39019869	6mer	39019849	39019870	143.00	-18.04
CAediting_1482565	chr22_39019886_+	ENSG00000244509.3	ENST00000361441	hsa-miR-17-3p	39019879	39019885	7mer-m8	39019864	39019886	159.00	-18.78
CAediting_1482565	chr22_39019886_+	ENSG00000244509.3	ENST00000361441	hsa-miR-485-5p	39019883	39019889	7mer-m8	39019870	39019890	153.00	-17.87
CAediting_1482565	chr22_39019886_+	ENSG00000244509.3	ENST00000361441	hsa-miR-604	39019882	39019887	6mer	39019868	39019888	140.00	-22.97
CAediting_1482565	chr22_39019886_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6884-5p	39019883	39019889	7mer-m8	39019868	39019890	146.00	-21.08
CAediting_1482566	chr22_39019910_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4511	39019909	39019914	6mer	39019893	39019915	145.00	-19.52
CAediting_1482566	chr22_39019910_+	ENSG00000244509.3	ENST00000361441	hsa-miR-548b-3p	39019908	39019914	7mer-m8	39019894	39019915	142.00	-10.43
CAediting_1482570	chr22_39019976_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1323	39019969	39019975	7mer-m8	39019957	39019976	143.00	-10.31
CAediting_1482570	chr22_39019976_+	ENSG00000244509.3	ENST00000361441	hsa-miR-548o-3p	39019969	39019975	7mer-m8	39019953	39019976	154.00	-17.71
CAediting_1482570	chr22_39019976_+	ENSG00000244509.3	ENST00000361441	hsa-miR-548o-3p	39019969	39019975	7mer-m8	39019953	39019976	154.00	-17.71
CAediting_1482574	chr22_39020018_+	ENSG00000244509.3	ENST00000361441	hsa-miR-28-5p	39020016	39020022	7mer-m8	39019998	39020023	154.00	-22.78
CAediting_1482574	chr22_39020018_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3139	39020016	39020022	7mer-m8	39020001	39020023	157.00	-20.94
CAediting_1482574	chr22_39020018_+	ENSG00000244509.3	ENST00000361441	hsa-miR-708-5p	39020016	39020022	7mer-m8	39019997	39020023	151.00	-23.68
CAediting_1482576	chr22_39020058_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4254	39020052	39020058	7mer-m8	39020037	39020059	141.00	-15.33
CAediting_1482576	chr22_39020058_+	ENSG00000244509.3	ENST00000361441	hsa-miR-619-3p	39020053	39020059	7mer-m8	39020037	39020060	151.00	-15.97
CAediting_1482576	chr22_39020058_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6765-3p	39020054	39020060	7mer-m8	39020041	39020061	144.00	-18.31
CAediting_1482576	chr22_39020058_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6804-3p	39020055	39020061	7mer-m8	39020041	39020062	140.00	-11.26
CAediting_1482576	chr22_39020058_+	ENSG00000244509.3	ENST00000361441	hsa-miR-7851-3p	39020054	39020059	6mer	39020038	39020060	151.00	-31.75
CAediting_1482578	chr22_39020070_+	ENSG00000244509.3	ENST00000361441	hsa-miR-106a-3p	39020066	39020071	6mer	39020051	39020072	141.00	-20.74
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000361441	hsa-miR-513a-5p	39018718	39018724	7mer-m8	39018708	39018725	148.00	-17.43
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000361441	hsa-miR-513a-5p	39018718	39018724	7mer-m8	39018708	39018725	148.00	-17.43
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000361441	hsa-miR-638	39018723	39018728	6mer	39018705	39018729	159.00	-32.19
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000428892	hsa-miR-513a-5p	39018718	39018724	7mer-m8	39018708	39018725	148.00	-17.43
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000428892	hsa-miR-513a-5p	39018718	39018724	7mer-m8	39018708	39018725	148.00	-17.43
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000428892	hsa-miR-638	39018723	39018728	6mer	39018705	39018729	159.00	-32.19
CAediting_1482522	chr22_39018747_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1281	39018740	39018747	8mer-1a	39018731	39018747	141.00	-17.35
CAediting_1482522	chr22_39018747_+	ENSG00000244509.3	ENST00000428892	hsa-miR-1281	39018740	39018747	8mer-1a	39018731	39018747	141.00	-17.35
CAediting_1482525	chr22_39018756_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3679-3p	39018752	39018758	7mer-m8	39018737	39018759	146.00	-19.51
CAediting_1482525	chr22_39018756_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3679-3p	39018752	39018758	7mer-m8	39018737	39018759	146.00	-19.51
CAediting_1482528	chr22_39018775_+	ENSG00000244509.3	ENST00000361441	hsa-miR-331-3p	39018769	39018775	7mer-m8	39018756	39018776	158.00	-23.85
CAediting_1482528	chr22_39018775_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4292	39018768	39018774	7mer-m8	39018758	39018775	145.00	-25.17
CAediting_1482528	chr22_39018775_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6791-5p	39018768	39018774	7mer-m8	39018758	39018775	146.00	-29.02
CAediting_1482528	chr22_39018775_+	ENSG00000244509.3	ENST00000428892	hsa-miR-331-3p	39018769	39018775	7mer-m8	39018756	39018776	158.00	-23.85
CAediting_1482528	chr22_39018775_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4292	39018768	39018774	7mer-m8	39018758	39018775	145.00	-25.17
CAediting_1482528	chr22_39018775_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6791-5p	39018768	39018774	7mer-m8	39018758	39018775	146.00	-29.02
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3678-3p	39018812	39018819	8mer-1a	39018798	39018819	144.00	-12.86
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4756-3p	39018810	39018816	7mer-m8	39018797	39018817	155.00	-16.44
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000361441	hsa-miR-557	39018815	39018821	7mer-1a	39018798	39018821	148.00	-24.81
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3678-3p	39018812	39018819	8mer-1a	39018798	39018819	144.00	-12.86
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4756-3p	39018810	39018816	7mer-m8	39018797	39018817	155.00	-16.44
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000428892	hsa-miR-557	39018815	39018821	7mer-1a	39018798	39018821	148.00	-24.81
CAediting_1482534	chr22_39018821_+	ENSG00000244509.3	ENST00000361441	hsa-miR-578	39018816	39018823	8mer-1a	39018802	39018823	142.00	-9.00
CAediting_1482534	chr22_39018821_+	ENSG00000244509.3	ENST00000428892	hsa-miR-578	39018816	39018823	8mer-1a	39018802	39018823	142.00	-9.00
CAediting_1482535	chr22_39018822_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6844	39018816	39018823	8mer-1a	39018803	39018823	140.00	-8.12
CAediting_1482535	chr22_39018822_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6844	39018816	39018823	8mer-1a	39018803	39018823	140.00	-8.12
CAediting_1482539	chr22_39018845_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3176	39018843	39018850	8mer-1a	39018832	39018850	140.00	-14.41
CAediting_1482539	chr22_39018845_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3922-3p	39018843	39018850	8mer-1a	39018829	39018850	146.00	-16.28
CAediting_1482539	chr22_39018845_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3176	39018843	39018850	8mer-1a	39018832	39018850	140.00	-14.41
CAediting_1482539	chr22_39018845_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3922-3p	39018843	39018850	8mer-1a	39018829	39018850	146.00	-16.28
CAediting_1482541	chr22_39018851_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1228-3p	39018848	39018854	7mer-m8	39018836	39018855	152.00	-17.58
CAediting_1482541	chr22_39018851_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6765-3p	39018846	39018852	7mer-m8	39018833	39018853	150.00	-18.64
CAediting_1482541	chr22_39018851_+	ENSG00000244509.3	ENST00000428892	hsa-miR-1228-3p	39018848	39018854	7mer-m8	39018836	39018855	152.00	-17.58
CAediting_1482541	chr22_39018851_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6765-3p	39018846	39018852	7mer-m8	39018833	39018853	150.00	-18.64
CAediting_1482543	chr22_39018876_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3917	39018871	39018877	7mer-m8	39018861	39018878	159.00	-28.72
CAediting_1482543	chr22_39018876_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3917	39018871	39018877	7mer-m8	39018861	39018878	159.00	-28.72
CAediting_1482545	chr22_39018881_+	ENSG00000244509.3	ENST00000361441	hsa-miR-646	39018876	39018882	7mer-m8	39018862	39018883	142.00	-16.84
CAediting_1482545	chr22_39018881_+	ENSG00000244509.3	ENST00000428892	hsa-miR-646	39018876	39018882	7mer-m8	39018862	39018883	142.00	-16.84
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000361441	hsa-miR-508-5p	39018890	39018896	7mer-m8	39018875	39018897	140.00	-16.74
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6512-3p	39018888	39018894	7mer-m8	39018874	39018895	156.00	-24.35
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6720-5p	39018888	39018894	7mer-m8	39018870	39018895	146.00	-23.47
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6849-3p	39018887	39018894	8mer-1a	39018873	39018894	140.00	-17.30
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000361441	hsa-miR-766-3p	39018889	39018895	7mer-m8	39018875	39018896	155.00	-25.84
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000428892	hsa-miR-508-5p	39018890	39018896	7mer-m8	39018875	39018897	140.00	-16.74
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6512-3p	39018888	39018894	7mer-m8	39018874	39018895	156.00	-24.35
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6720-5p	39018888	39018894	7mer-m8	39018870	39018895	146.00	-23.47
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6849-3p	39018887	39018894	8mer-1a	39018873	39018894	140.00	-17.30
CAediting_1482546	chr22_39018894_+	ENSG00000244509.3	ENST00000428892	hsa-miR-766-3p	39018889	39018895	7mer-m8	39018875	39018896	155.00	-25.84
CAediting_1482549	chr22_39018912_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3136-3p	39018908	39018914	7mer-m8	39018894	39018915	148.00	-16.28
CAediting_1482549	chr22_39018912_+	ENSG00000244509.3	ENST00000361441	hsa-miR-7155-3p	39018908	39018914	7mer-m8	39018894	39018915	148.00	-24.35
CAediting_1482549	chr22_39018912_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3136-3p	39018908	39018914	7mer-m8	39018894	39018915	148.00	-16.28
CAediting_1482549	chr22_39018912_+	ENSG00000244509.3	ENST00000428892	hsa-miR-7155-3p	39018908	39018914	7mer-m8	39018894	39018915	148.00	-24.35
CAediting_1482552	chr22_39018933_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6802-3p	39018930	39018937	8mer-1a	39018913	39018937	154.00	-25.47
CAediting_1482553	chr22_39018937_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4436b-5p	39018932	39018937	6mer	39018916	39018938	154.00	-31.01
CAediting_1482553	chr22_39018937_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4436b-5p	39018932	39018937	6mer	39018916	39018938	154.00	-31.01
CAediting_1482555	chr22_39019824_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4433b-5p	39019821	39019827	7mer-m8	39019808	39019828	140.00	-10.81
CAediting_1482556	chr22_39019826_+	ENSG00000244509.3	ENST00000361441	hsa-miR-5001-3p	39019823	39019829	7mer-m8	39019809	39019830	145.00	-15.37
CAediting_1482557	chr22_39019828_+	ENSG00000244509.3	ENST00000361441	hsa-miR-340-3p	39019822	39019829	8mer-1a	39019808	39019829	146.00	-18.22
CAediting_1482557	chr22_39019828_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6827-3p	39019822	39019829	8mer-1a	39019809	39019829	140.00	-14.67
CAediting_1482558	chr22_39019849_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3940-3p	39019846	39019852	7mer-m8	39019832	39019853	147.00	-22.29
CAediting_1482558	chr22_39019849_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4442	39019843	39019849	7mer-m8	39019834	39019850	166.00	-28.38
CAediting_1482573	chr22_39020017_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1289	39020015	39020021	7mer-m8	39019997	39020022	151.00	-21.09
CAediting_1482573	chr22_39020017_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1289	39020015	39020021	7mer-m8	39019997	39020022	151.00	-21.09
CAediting_1482551	chr22_39018920_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6795-3p	39018915	39018921	7mer-m8	39018902	39018922	140.00	-17.91
CAediting_1482551	chr22_39018920_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6795-3p	39018915	39018921	7mer-m8	39018902	39018922	140.00	-17.91

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000361441	hsa-miR-10399-5p	39018719	39018725	7mer-m8	39018705	39018726	148	-10.46
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-10400-3p	39018765	39018771	7mer-m8	39018753	39018772	149	-23.74
CAediting_1482576	chr22_39020058_+	ENSG00000244509.3	ENST00000361441	hsa-miR-12131	39020051	39020057	7mer-m8	39020039	39020058	151	-18.87
CAediting_1482542	chr22_39018871_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1269a	39018870	39018876	7mer-1a	39018852	39018876	142	-22.19
CAediting_1482543	chr22_39018876_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1269a	39018870	39018876	7mer-1a	39018852	39018876	142	-22.19
CAediting_1482542	chr22_39018871_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1269b	39018870	39018876	7mer-1a	39018852	39018876	146	-22.18
CAediting_1482543	chr22_39018876_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1269b	39018870	39018876	7mer-1a	39018852	39018876	146	-22.18
CAediting_1482521	chr22_39018743_+	ENSG00000244509.3	ENST00000361441	hsa-miR-150-5p	39018737	39018743	7mer-m8	39018723	39018744	140	-14.15
CAediting_1482562	chr22_39019876_+	ENSG00000244509.3	ENST00000361441	hsa-miR-198	39019870	39019876	7mer-m8	39019855	39019877	141	-15.65
CAediting_1482539	chr22_39018845_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3119	39018841	39018848	8mer-1a	39018829	39018848	146	-10.02
CAediting_1482539	chr22_39018845_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3119	39018841	39018848	8mer-1a	39018829	39018848	146	-10.02
CAediting_1482540	chr22_39018849_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3126-3p	39018845	39018851	7mer-m8	39018831	39018852	142	-15.03
CAediting_1482541	chr22_39018851_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3126-3p	39018845	39018851	7mer-m8	39018831	39018852	142	-15.03
CAediting_1482521	chr22_39018743_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3152-5p	39018741	39018748	8mer-1a	39018727	39018748	141	-12.55
CAediting_1482522	chr22_39018747_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3152-5p	39018741	39018748	8mer-1a	39018727	39018748	141	-12.55
CAediting_1482523	chr22_39018748_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3152-5p	39018741	39018748	8mer-1a	39018727	39018748	141	-12.55
CAediting_1482563	chr22_39019880_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3174	39019875	39019881	7mer-m8	39019861	39019882	149	-20.14
CAediting_1482572	chr22_39020005_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3190-5p	39019999	39020006	8mer-1a	39019987	39020006	147	-18.68
CAediting_1482576	chr22_39020058_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3614-5p	39020054	39020060	7mer-m8	39020043	39020061	154	-21.56
CAediting_1482550	chr22_39018918_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3615	39018914	39018920	7mer-m8	39018900	39018921	146	-20.28
CAediting_1482551	chr22_39018920_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3615	39018914	39018920	7mer-m8	39018900	39018921	146	-20.28
CAediting_1482557	chr22_39019828_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3664-5p	39019825	39019831	7mer-m8	39019811	39019832	153	-15.08
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3674	39018813	39018820	8mer-1a	39018799	39018820	140	-10.26
CAediting_1482532	chr22_39018819_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3674	39018813	39018820	8mer-1a	39018799	39018820	140	-10.26
CAediting_1482533	chr22_39018820_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3674	39018813	39018820	8mer-1a	39018799	39018820	140	-10.26
CAediting_1482555	chr22_39019824_+	ENSG00000244509.3	ENST00000361441	hsa-miR-371b-5p	39019818	39019825	8mer-1a	39019804	39019825	146	-7.79
CAediting_1482555	chr22_39019824_+	ENSG00000244509.3	ENST00000361441	hsa-miR-373-5p	39019818	39019825	8mer-1a	39019804	39019825	142	-8.35
CAediting_1482564	chr22_39019885_+	ENSG00000244509.3	ENST00000361441	hsa-miR-377-5p	39019883	39019889	7mer-m8	39019869	39019890	152	-18.69
CAediting_1482565	chr22_39019886_+	ENSG00000244509.3	ENST00000361441	hsa-miR-377-5p	39019883	39019889	7mer-m8	39019869	39019890	152	-18.69
CAediting_1482552	chr22_39018933_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3925-3p	39018928	39018933	6mer	39018913	39018934	145	-27.18
CAediting_1482569	chr22_39019954_+	ENSG00000244509.3	ENST00000361441	hsa-miR-3934-5p	39019951	39019957	7mer-m8	39019937	39019958	153	-23.82
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4284	39018763	39018769	7mer-m8	39018749	39018770	141	-22.71
CAediting_1482576	chr22_39020058_+	ENSG00000244509.3	ENST00000361441	hsa-miR-432-5p	39020052	39020058	7mer-m8	39020038	39020059	147	-23.8
CAediting_1482575	chr22_39020048_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4329	39020042	39020048	7mer-m8	39020031	39020049	140	-11.27
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4437	39018764	39018771	8mer-1a	39018751	39018771	142	-17.36
CAediting_1482549	chr22_39018912_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4437	39018909	39018915	7mer-m8	39018897	39018916	147	-19.54
CAediting_1482580	chr22_39020083_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4460	39020080	39020085	6mer	39020064	39020086	141	-16.62
CAediting_1482567	chr22_39019923_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4478	39019920	39019926	7mer-m8	39019910	39019927	154	-25.02
CAediting_1482575	chr22_39020048_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4478	39020045	39020051	7mer-m8	39020037	39020052	149	-22.29
CAediting_1482529	chr22_39018796_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4501	39018792	39018798	7mer-m8	39018779	39018799	152	-20.01
CAediting_1482543	chr22_39018876_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4538	39018873	39018880	8mer-1a	39018857	39018880	150	-18.69
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4538	39018873	39018880	8mer-1a	39018857	39018880	150	-18.69
CAediting_1482558	chr22_39019849_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4638-3p	39019843	39019849	7mer-m8	39019828	39019850	140	-19.8
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4674	39018765	39018771	7mer-m8	39018755	39018772	148	-26.66
CAediting_1482525	chr22_39018756_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4713-5p	39018751	39018758	8mer-1a	39018738	39018758	150	-28.8
CAediting_1482575	chr22_39020048_+	ENSG00000244509.3	ENST00000361441	hsa-miR-485-5p	39020046	39020052	7mer-m8	39020031	39020053	145	-18.66
CAediting_1482552	chr22_39018933_+	ENSG00000244509.3	ENST00000361441	hsa-miR-508-5p	39018928	39018934	7mer-m8	39018913	39018935	152	-21.73
CAediting_1482555	chr22_39019824_+	ENSG00000244509.3	ENST00000361441	hsa-miR-514b-5p	39019820	39019825	6mer	39019805	39019826	146	-12.74
CAediting_1482556	chr22_39019826_+	ENSG00000244509.3	ENST00000361441	hsa-miR-514b-5p	39019820	39019825	6mer	39019805	39019826	146	-12.74
CAediting_1482572	chr22_39020005_+	ENSG00000244509.3	ENST00000361441	hsa-miR-548s	39019998	39020004	7mer-m8	39019984	39020005	143	-12.53
CAediting_1482545	chr22_39018881_+	ENSG00000244509.3	ENST00000361441	hsa-miR-562	39018877	39018883	7mer-m8	39018864	39018884	151	-11.08
CAediting_1482545	chr22_39018881_+	ENSG00000244509.3	ENST00000361441	hsa-miR-5697	39018878	39018884	7mer-m8	39018863	39018885	155	-16.63
CAediting_1482564	chr22_39019885_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6086	39019883	39019889	7mer-m8	39019869	39019890	145	-22.15
CAediting_1482565	chr22_39019886_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6086	39019883	39019889	7mer-m8	39019869	39019890	145	-22.15
CAediting_1482555	chr22_39019824_+	ENSG00000244509.3	ENST00000361441	hsa-miR-616-5p	39019818	39019825	8mer-1a	39019804	39019825	140	-5.71
CAediting_1482572	chr22_39020005_+	ENSG00000244509.3	ENST00000361441	hsa-miR-622	39020003	39020009	7mer-m8	39019990	39020010	150	-17.01
CAediting_1482525	chr22_39018756_+	ENSG00000244509.3	ENST00000361441	hsa-miR-629-3p	39018752	39018758	7mer-m8	39018739	39018759	152	-20.28
CAediting_1482526	chr22_39018759_+	ENSG00000244509.3	ENST00000361441	hsa-miR-629-3p	39018752	39018758	7mer-m8	39018739	39018759	152	-20.28
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6504-3p	39018719	39018725	7mer-m8	39018707	39018726	140	-7.64
CAediting_1482552	chr22_39018933_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6512-3p	39018926	39018932	7mer-m8	39018910	39018933	145	-22.58
CAediting_1482579	chr22_39020072_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6514-3p	39020069	39020075	7mer-m8	39020056	39020076	155	-17.54
CAediting_1482564	chr22_39019885_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6516-5p	39019879	39019885	7mer-m8	39019861	39019886	152	-18.47
CAediting_1482565	chr22_39019886_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6516-5p	39019879	39019885	7mer-m8	39019861	39019886	152	-18.47
CAediting_1482552	chr22_39018933_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6720-5p	39018926	39018932	7mer-m8	39018911	39018933	140	-20.8
CAediting_1482521	chr22_39018743_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6778-3p	39018739	39018746	8mer-1a	39018728	39018746	146	-16.34
CAediting_1482528	chr22_39018775_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6783-3p	39018768	39018774	7mer-m8	39018754	39018775	151	-21.15
CAediting_1482550	chr22_39018918_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6800-3p	39018916	39018922	7mer-m8	39018905	39018923	145	-22.29
CAediting_1482551	chr22_39018920_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6800-3p	39018916	39018922	7mer-m8	39018905	39018923	145	-22.29
CAediting_1482529	chr22_39018796_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6808-3p	39018791	39018797	7mer-m8	39018781	39018798	145	-18.26
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6832-5p	39018811	39018818	8mer-1a	39018796	39018818	142	-14.52
CAediting_1482521	chr22_39018743_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6836-3p	39018740	39018747	8mer-1a	39018727	39018747	145	-17.69
CAediting_1482522	chr22_39018747_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6836-3p	39018740	39018747	8mer-1a	39018727	39018747	145	-17.69
CAediting_1482580	chr22_39020083_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6842-3p	39020077	39020082	6mer	39020062	39020083	142	-21.35
CAediting_1482571	chr22_39019993_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6864-3p	39019987	39019992	6mer	39019972	39019993	141	-22.18
CAediting_1482519	chr22_39018706_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6872-3p	39018702	39018708	7mer-m8	39018691	39018709	148	-20.08
CAediting_1482556	chr22_39019826_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6888-3p	39019823	39019829	7mer-m8	39019810	39019830	151	-14.42
CAediting_1482557	chr22_39019828_+	ENSG00000244509.3	ENST00000361441	hsa-miR-6888-3p	39019823	39019829	7mer-m8	39019810	39019830	151	-14.42
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000361441	hsa-miR-7151-3p	39018717	39018724	8mer-1a	39018704	39018724	146	-14.97
CAediting_1482529	chr22_39018796_+	ENSG00000244509.3	ENST00000361441	hsa-miR-7973	39018790	39018797	8mer-1a	39018779	39018797	141	-17.19
CAediting_1482529	chr22_39018796_+	ENSG00000244509.3	ENST00000361441	hsa-miR-7973	39018790	39018797	8mer-1a	39018779	39018797	141	-17.19
CAediting_1482577	chr22_39020067_+	ENSG00000244509.3	ENST00000361441	hsa-miR-7977	39020060	39020066	7mer-m8	39020050	39020067	140	-13.07
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000428892	hsa-miR-10399-5p	39018719	39018725	7mer-m8	39018705	39018726	148	-10.46
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-10400-3p	39018765	39018771	7mer-m8	39018753	39018772	149	-23.74
CAediting_1482542	chr22_39018871_+	ENSG00000244509.3	ENST00000428892	hsa-miR-1269a	39018870	39018876	7mer-1a	39018852	39018876	142	-22.19
CAediting_1482543	chr22_39018876_+	ENSG00000244509.3	ENST00000428892	hsa-miR-1269a	39018870	39018876	7mer-1a	39018852	39018876	142	-22.19
CAediting_1482542	chr22_39018871_+	ENSG00000244509.3	ENST00000428892	hsa-miR-1269b	39018870	39018876	7mer-1a	39018852	39018876	146	-22.18
CAediting_1482543	chr22_39018876_+	ENSG00000244509.3	ENST00000428892	hsa-miR-1269b	39018870	39018876	7mer-1a	39018852	39018876	146	-22.18
CAediting_1482521	chr22_39018743_+	ENSG00000244509.3	ENST00000428892	hsa-miR-150-5p	39018737	39018743	7mer-m8	39018723	39018744	140	-14.15
CAediting_1482539	chr22_39018845_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3119	39018841	39018848	8mer-1a	39018829	39018848	146	-10.02
CAediting_1482539	chr22_39018845_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3119	39018841	39018848	8mer-1a	39018829	39018848	146	-10.02
CAediting_1482540	chr22_39018849_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3126-3p	39018845	39018851	7mer-m8	39018831	39018852	142	-15.03
CAediting_1482541	chr22_39018851_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3126-3p	39018845	39018851	7mer-m8	39018831	39018852	142	-15.03
CAediting_1482521	chr22_39018743_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3152-5p	39018741	39018748	8mer-1a	39018727	39018748	141	-12.55
CAediting_1482522	chr22_39018747_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3152-5p	39018741	39018748	8mer-1a	39018727	39018748	141	-12.55
CAediting_1482523	chr22_39018748_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3152-5p	39018741	39018748	8mer-1a	39018727	39018748	141	-12.55
CAediting_1482550	chr22_39018918_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3615	39018914	39018920	7mer-m8	39018900	39018921	146	-20.28
CAediting_1482551	chr22_39018920_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3615	39018914	39018920	7mer-m8	39018900	39018921	146	-20.28
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3674	39018813	39018820	8mer-1a	39018799	39018820	140	-10.26
CAediting_1482532	chr22_39018819_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3674	39018813	39018820	8mer-1a	39018799	39018820	140	-10.26
CAediting_1482533	chr22_39018820_+	ENSG00000244509.3	ENST00000428892	hsa-miR-3674	39018813	39018820	8mer-1a	39018799	39018820	140	-10.26
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4284	39018763	39018769	7mer-m8	39018749	39018770	141	-22.71
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4437	39018764	39018771	8mer-1a	39018751	39018771	142	-17.36
CAediting_1482549	chr22_39018912_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4437	39018909	39018915	7mer-m8	39018897	39018916	147	-19.54
CAediting_1482529	chr22_39018796_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4501	39018792	39018798	7mer-m8	39018779	39018799	152	-20.01
CAediting_1482543	chr22_39018876_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4538	39018873	39018880	8mer-1a	39018857	39018880	150	-18.69
CAediting_1482544	chr22_39018877_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4538	39018873	39018880	8mer-1a	39018857	39018880	150	-18.69
CAediting_1482527	chr22_39018767_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4674	39018765	39018771	7mer-m8	39018755	39018772	148	-26.66
CAediting_1482525	chr22_39018756_+	ENSG00000244509.3	ENST00000428892	hsa-miR-4713-5p	39018751	39018758	8mer-1a	39018738	39018758	150	-28.8
CAediting_1482545	chr22_39018881_+	ENSG00000244509.3	ENST00000428892	hsa-miR-562	39018877	39018883	7mer-m8	39018864	39018884	151	-11.08
CAediting_1482545	chr22_39018881_+	ENSG00000244509.3	ENST00000428892	hsa-miR-5697	39018878	39018884	7mer-m8	39018863	39018885	155	-16.63
CAediting_1482525	chr22_39018756_+	ENSG00000244509.3	ENST00000428892	hsa-miR-629-3p	39018752	39018758	7mer-m8	39018739	39018759	152	-20.28
CAediting_1482526	chr22_39018759_+	ENSG00000244509.3	ENST00000428892	hsa-miR-629-3p	39018752	39018758	7mer-m8	39018739	39018759	152	-20.28
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6504-3p	39018719	39018725	7mer-m8	39018707	39018726	140	-7.64
CAediting_1482521	chr22_39018743_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6778-3p	39018739	39018746	8mer-1a	39018728	39018746	146	-16.34
CAediting_1482528	chr22_39018775_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6783-3p	39018768	39018774	7mer-m8	39018754	39018775	151	-21.15
CAediting_1482550	chr22_39018918_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6800-3p	39018916	39018922	7mer-m8	39018905	39018923	145	-22.29
CAediting_1482551	chr22_39018920_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6800-3p	39018916	39018922	7mer-m8	39018905	39018923	145	-22.29
CAediting_1482529	chr22_39018796_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6808-3p	39018791	39018797	7mer-m8	39018781	39018798	145	-18.26
CAediting_1482531	chr22_39018817_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6832-5p	39018811	39018818	8mer-1a	39018796	39018818	142	-14.52
CAediting_1482521	chr22_39018743_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6836-3p	39018740	39018747	8mer-1a	39018727	39018747	145	-17.69
CAediting_1482522	chr22_39018747_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6836-3p	39018740	39018747	8mer-1a	39018727	39018747	145	-17.69
CAediting_1482519	chr22_39018706_+	ENSG00000244509.3	ENST00000428892	hsa-miR-6872-3p	39018702	39018708	7mer-m8	39018691	39018709	148	-20.08
CAediting_1482520	chr22_39018724_+	ENSG00000244509.3	ENST00000428892	hsa-miR-7151-3p	39018717	39018724	8mer-1a	39018704	39018724	146	-14.97
CAediting_1482529	chr22_39018796_+	ENSG00000244509.3	ENST00000428892	hsa-miR-7973	39018790	39018797	8mer-1a	39018779	39018797	141	-17.19
CAediting_1482529	chr22_39018796_+	ENSG00000244509.3	ENST00000428892	hsa-miR-7973	39018790	39018797	8mer-1a	39018779	39018797	141	-17.19

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000244509.3	ENST00000361441	hsa-miR-548aa	39018647	39018653	7mer-m8	39018630	39018654	140	-13.21
CAediting_1160181	chr17_7017644_-	ENSG00000244509.3	ENST00000361441	hsa-miR-195-3p	39019164	39019170	7mer-m8	39019149	39019171	159	-17.46
CAediting_1368054	chr19_46709310_-	ENSG00000244509.3	ENST00000361441	hsa-miR-320e	39019315	39019321	7mer-m8	39019305	39019322	145	-18.15
CAediting_86358	chr1_109598906_+	ENSG00000244509.3	ENST00000361441	hsa-miR-197-5p	39018602	39018608	7mer-m8	39018585	39018609	159	-30.63
CAediting_86358	chr1_109598906_+	ENSG00000244509.3	ENST00000361441	hsa-miR-197-5p	39018452	39018458	7mer-m8	39018434	39018459	157	-27.18
CAediting_77128	chr1_85133844_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4423-3p	39019608	39019614	7mer-m8	39019595	39019615	145	-16.18
CAediting_77128	chr1_85133844_+	ENSG00000244509.3	ENST00000361441	hsa-miR-4423-3p	39019335	39019341	7mer-m8	39019322	39019342	151	-14.93
CAediting_1399425	chr20_1392958_-	ENSG00000244509.3	ENST00000361441	hsa-miR-6869-5p	39019109	39019115	7mer-m8	39019096	39019116	145	-20.99
CAediting_442554	chr5_154685830_+	ENSG00000244509.3	ENST00000361441	hsa-miR-1303	39020051	39020057	7mer-m8	39020035	39020058	146	-16.8
CAediting_1229415	chr17_67471547_+	ENSG00000244509.3	ENST00000428892	hsa-miR-548aa	39018647	39018653	7mer-m8	39018630	39018654	140	-13.21
CAediting_86358	chr1_109598906_+	ENSG00000244509.3	ENST00000428892	hsa-miR-197-5p	39018452	39018458	7mer-m8	39018434	39018459	157	-27.18
CAediting_86358	chr1_109598906_+	ENSG00000244509.3	ENST00000428892	hsa-miR-197-5p	39018602	39018608	7mer-m8	39018585	39018609	159	-30.63
CAediting_468389	chr6_31355314_-	ENSG00000244509.3	ENST00000361441	hsa-miR-6891-5p	39018543	39018549	7mer-m8	39018530	39018550	156	-29.95
CAediting_468389	chr6_31355314_-	ENSG00000244509.3	ENST00000361441	hsa-miR-6891-5p	39018414	39018419	6mer	39018399	39018420	140	-25.07
CAediting_468389	chr6_31355314_-	ENSG00000244509.3	ENST00000428892	hsa-miR-6891-5p	39018414	39018419	6mer	39018399	39018420	140	-25.07
CAediting_468389	chr6_31355314_-	ENSG00000244509.3	ENST00000428892	hsa-miR-6891-5p	39018543	39018549	7mer-m8	39018530	39018550	156	-29.95

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000244509.3	ENST00000361441	hsa-miR-320e	39019230	39019236	7mer-m8	39019220	39019237	154	-16.01

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for APOBEC3C

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for APOBEC3C

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
OV	CAediting_1482524	chr22_39018749_+	0.0463866974711567	0.264961973673039	.	.	.	.
BLCA	CAediting_1482527	chr22_39018767_+	1.12874050967167e-07	0.37800162229378	.	.	.	.
LGG	CAediting_1482527	chr22_39018767_+	0.00013717551005819	0.252616938311836	.	.	.	.
BRCA	CAediting_1482527	chr22_39018767_+	7.12833404094956e-20	0.298315873843817	.	.	.	.
LIHC	CAediting_1482527	chr22_39018767_+	0.00744998231624531	0.280317558706684	.	.	0.0203718573636739	0.244188947575847
CESC	CAediting_1482527	chr22_39018767_+	3.3944066213582e-11	0.450681226782139	.	.	.	.
LUAD	CAediting_1482527	chr22_39018767_+	2.68287348415782e-19	0.415986536249929	.	.	.	.
COAD	CAediting_1482527	chr22_39018767_+	0.00497471074983167	0.206232491631313	.	.	.	.
LUSC	CAediting_1482527	chr22_39018767_+	1.30469456035186e-21	0.481635276814612	0.0358752693207495	0.112530110528303	0.00302602294392107	0.158509337954921
GBM	CAediting_1482527	chr22_39018767_+	4.44594209626218e-07	0.427186470145651	.	.	.	.
HNSC	CAediting_1482527	chr22_39018767_+	1.83811184565529e-13	0.380937070271223	.	.	.	.
STAD	CAediting_1482527	chr22_39018767_+	3.82473765668011e-06	0.25540792318801	.	.	.	.
THCA	CAediting_1482527	chr22_39018767_+	3.98897004648784e-19	0.454315959845525	.	.	.	.
KIRC	CAediting_1482527	chr22_39018767_+	4.38234064781669e-17	0.3689341526203	.	.	.	.
UCEC	CAediting_1482527	chr22_39018767_+	0.000166636629980834	0.258163363355605	.	.	.	.
ESCA	CAediting_1482527	chr22_39018767_+	0.000204662364371694	0.30995493558126	.	.	.	.
OV	CAediting_1482527	chr22_39018767_+	9.59114025924845e-16	0.40895074969973	.	.	.	.
PAAD	CAediting_1482527	chr22_39018767_+	4.15800098540616e-05	0.353935674131864	.	.	.	.
PCPG	CAediting_1482527	chr22_39018767_+	1.34125788638296e-10	0.484036308352057	.	.	.	.
SKCM	CAediting_1482527	chr22_39018767_+	1.03073669913498e-33	0.596870346470142	.	.	.	.
MESO	CAediting_1482527	chr22_39018767_+	0.00041858495571491	0.418901834439391	.	.	.	.
SARC	CAediting_1482527	chr22_39018767_+	2.28930118879149e-16	0.554199607852734	.	.	.	.
TGCT	CAediting_1482527	chr22_39018767_+	0.00223755452074294	0.299378609730395	.	.	.	.
THYM	CAediting_1482527	chr22_39018767_+	1.21430968487167e-10	0.692220086227858	.	.	.	.
OV	CAediting_1482547	chr22_39018895_+	3.08393382944209e-05	0.402018841717084	.	.	.	.
BLCA	CAediting_1482548	chr22_39018907_+	1.07573200576961e-35	0.610481609049431	.	.	.	.
LGG	CAediting_1482548	chr22_39018907_+	2.75762951288268e-05	0.222719619060981	0.0342332653836469	0.113541145708761	.	.
BRCA	CAediting_1482548	chr22_39018907_+	3.64611130653391e-25	0.319485535308779	.	.	.	.
LIHC	CAediting_1482548	chr22_39018907_+	0.0133599887672002	0.214053245031009	.	.	.	.
CESC	CAediting_1482548	chr22_39018907_+	7.13201354886416e-25	0.565269826038782	.	.	.	.
LUAD	CAediting_1482548	chr22_39018907_+	1.00358434517368e-19	0.392215893567274	.	.	.	.
COAD	CAediting_1482548	chr22_39018907_+	5.24174729555942e-09	0.336073143445012	0.0301169266604358	0.128036886881549	.	.
LUSC	CAediting_1482548	chr22_39018907_+	3.06324806563707e-46	0.590919536879393	.	.	1.05768363198676e-06	0.221271563274679
GBM	CAediting_1482548	chr22_39018907_+	3.1588931456242e-10	0.474000907104243	.	.	.	.
PRAD	CAediting_1482548	chr22_39018907_+	0.00210286396837974	0.154102980080097	.	.	.	.
HNSC	CAediting_1482548	chr22_39018907_+	9.88909038777693e-32	0.507423286306322	.	.	.	.
STAD	CAediting_1482548	chr22_39018907_+	4.55751360995814e-09	0.308140554671901	1.7715352896258e-05	0.228177850776922	.	.
THCA	CAediting_1482548	chr22_39018907_+	3.34836493047983e-31	0.495310576429734	.	.	.	.
KIRC	CAediting_1482548	chr22_39018907_+	3.53257247328157e-22	0.409644033173118	.	.	.	.
UCEC	CAediting_1482548	chr22_39018907_+	3.76973189593014e-15	0.423641909238414	0.00647030134922444	0.153123487808492	.	.
KIRP	CAediting_1482548	chr22_39018907_+	9.07598084914363e-06	0.29955183358275	.	.	.	.
ACC	CAediting_1482548	chr22_39018907_+	8.30953384652571e-09	0.638011598747366	.	.	.	.
ESCA	CAediting_1482548	chr22_39018907_+	3.55642338975462e-08	0.423718474130156	.	.	.	.
LAML	CAediting_1482548	chr22_39018907_+	0.027772853396162	0.203485789441949	.	.	.	.
OV	CAediting_1482548	chr22_39018907_+	5.35529653642174e-20	0.450558857676389	.	.	.	.
PAAD	CAediting_1482548	chr22_39018907_+	1.56407707587984e-08	0.421434545041194	.	.	.	.
PCPG	CAediting_1482548	chr22_39018907_+	4.51830640867033e-16	0.565153922829679	0.00135052375186525	0.241115018170661	.	.
SKCM	CAediting_1482548	chr22_39018907_+	2.60923463258707e-49	0.616063980283275	0.00634353132052858	0.127229767773558	.	.
UVM	CAediting_1482548	chr22_39018907_+	4.54205440531928e-07	0.550406603656491	.	.	.	.
MESO	CAediting_1482548	chr22_39018907_+	3.36300124299287e-07	0.517473324070809	.	.	.	.
READ	CAediting_1482548	chr22_39018907_+	0.0194895546229846	0.247256259218758	.	.	.	.
SARC	CAediting_1482548	chr22_39018907_+	5.4689159919074e-25	0.595391663845793	.	.	.	.
TGCT	CAediting_1482548	chr22_39018907_+	1.88712898280964e-05	0.363008787432878	.	.	0.00783670223699091	0.230505571197266
THYM	CAediting_1482548	chr22_39018907_+	6.69056938306982e-22	0.773252424684763	.	.	.	.
LGG	CAediting_1482560	chr22_39019869_+	0.0176725480275322	0.31052840903002	.	.	.	.
BRCA	CAediting_1482560	chr22_39019869_+	0.000475417370616784	0.205667596643055	.	.	.	.
LUAD	CAediting_1482560	chr22_39019869_+	1.38246265252327e-07	0.443781274122568	.	.	.	.
LUSC	CAediting_1482560	chr22_39019869_+	0.00246744802089891	0.307117667550989	.	.	.	.
HNSC	CAediting_1482560	chr22_39019869_+	0.012387588835074	0.268633857985176	.	.	.	.
KIRC	CAediting_1482560	chr22_39019869_+	0.0149561137295053	0.201749809338098	.	.	.	.
OV	CAediting_1482560	chr22_39019869_+	0.00316304773914848	0.210339057602904	.	.	.	.
PCPG	CAediting_1482560	chr22_39019869_+	0.0470697848371613	0.230064091413182	.	.	.	.
SKCM	CAediting_1482560	chr22_39019869_+	0.013471134655614	0.273555699429092	.	.	.	.
SARC	CAediting_1482560	chr22_39019869_+	0.00175999189227417	0.377866859365458	.	.	.	.
BLCA	CAediting_1482565	chr22_39019886_+	0.000901184473086778	0.299202970320443	.	.	.	.
LGG	CAediting_1482565	chr22_39019886_+	.	.	.	.	0.0452158862277701	0.201760409069077
BRCA	CAediting_1482565	chr22_39019886_+	0.0457949215720399	0.0782496550934867	.	.	.	.
CESC	CAediting_1482565	chr22_39019886_+	0.00141889787547784	0.275989595517778	.	.	.	.
LUAD	CAediting_1482565	chr22_39019886_+	0.00245476864107517	0.185323205900512	.	.	.	.
LUSC	CAediting_1482565	chr22_39019886_+	0.00960209963364634	0.179196959994746	.	.	.	.
GBM	CAediting_1482565	chr22_39019886_+	6.5446738700858e-08	0.431764290421755	.	.	.	.
STAD	CAediting_1482565	chr22_39019886_+	.	.	0.00166751939723868	0.184461964079499	.	.
THCA	CAediting_1482565	chr22_39019886_+	0.0357267429835948	0.160726126075631	.	.	.	.
UCEC	CAediting_1482565	chr22_39019886_+	2.91076114707761e-09	0.356354613635308	6.87838096321428e-05	0.243369485743757	.	.
ESCA	CAediting_1482565	chr22_39019886_+	0.000160429012925143	0.317010783098908	.	.	.	.
OV	CAediting_1482565	chr22_39019886_+	6.65832808530235e-09	0.303305022165007	.	.	.	.
SKCM	CAediting_1482565	chr22_39019886_+	.	.	0.00261948756383083	0.193414427751429	.	.
MESO	CAediting_1482565	chr22_39019886_+	.	.	0.0446097802794416	0.277043804281007	.	.
SARC	CAediting_1482565	chr22_39019886_+	.	.	1.53554597728589e-07	0.467829727221332	.	.
LUAD	CAediting_1482578	chr22_39020070_+	0.00324877205273757	0.333412724653553	.	.	.	.
KIRC	CAediting_1482578	chr22_39020070_+	0.0154682604372639	0.273320662737607	.	.	.	.
OV	CAediting_1482578	chr22_39020070_+	0.000279093553443927	0.300531503464585	.	.	.	.
SKCM	CAediting_1482578	chr22_39020070_+	0.000388580958576233	0.443347940949263	.	.	.	.

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Relation with cancer stages for APOBEC3C

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_1482527	chr22_39018767_+	0.0252475395225042	-0.349171251875714
HNSC	clinical_stage	CAediting_1482527	chr22_39018767_+	0.0154252975345523	0.131278694749281
HNSC	pathologic_stage	CAediting_1482527	chr22_39018767_+	0.0071160360106417	0.153320520198615
HNSC	pathologic_stage	CAediting_1482560	chr22_39019869_+	0.0392447467678057	0.23100329302599
KIRP	clinical_stage	CAediting_1482527	chr22_39018767_+	0.0197312748769019	0.280142443343848
KIRP	clinical_stage	CAediting_1482548	chr22_39018907_+	0.00248455831645625	0.249406607942306
KIRP	pathologic_stage	CAediting_1482548	chr22_39018907_+	0.000152915489721593	0.269241742122365
KIRP	pathologic_stage	CAediting_1482565	chr22_39019886_+	0.00618541583494054	0.344018704365811
OV	clinical_stage	CAediting_1482547	chr22_39018895_+	0.0132956674211235	0.248070324582069
TGCT	pathologic_stage	CAediting_1482548	chr22_39018907_+	0.00630577840560204	-0.33048591039418
THCA	pathologic_stage	CAediting_1482548	chr22_39018907_+	0.0304100357121175	0.0991310279297907
THCA	pathologic_stage	CAediting_1482560	chr22_39019869_+	0.0302958732517539	0.243910586157077
THCA	pathologic_stage	CAediting_1482565	chr22_39019886_+	0.0421016320493974	0.156543794985523

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Relation with survival for APOBEC3C

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_1482527	chr22_39018767_+	0.0377097314738332	0.0394785	0.0294874
KIRP	CAediting_1482527	chr22_39018767_+	0.0378806836562116	0.0358287	27.2621

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RelatedDrugs for APOBEC3C

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for APOBEC3C

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
APOBEC3C	C0033975	Psychotic Disorders	1	PSYGENET
APOBEC3C	C0349204	Nonorganic psychosis	1	PSYGENET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene