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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: GPR78 (CAeditome ID:27201)

Gene summary for GPR78

check button Gene summary
Gene informationGene symbol

GPR78

Gene ID

27201

Gene nameG protein-coupled receptor 78
Synonyms-
Cytomap

4p16.1

Type of geneprotein-coding
DescriptionG-protein coupled receptor 78
Modification date20210518
UniProtAcc

Q96P69

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
GPR78

GO:0004930

G-protein coupled receptor 78

17363172

GPR78

GO:0007189

G-protein coupled receptor 78

17363172


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RNA A-to-I events for GPR78

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000155269.10

check button RNA A-to-I editing events in Cancer.
CAediting_349779(8561296, +), CAediting_349780(8561304, +), CAediting_349781(8561340, +), CAediting_349782(8561348, +), CAediting_349783(8561381, +), CAediting_349784(8561382, +), CAediting_349785(8561402, +), CAediting_349786(8561411, +), CAediting_349787(8561415, +), CAediting_349788(8561427, +), CAediting_349789(8561437, +), CAediting_349790(8561438, +), CAediting_349791(8561454, +), CAediting_349792(8561460, +), CAediting_349793(8561478, +), CAediting_349794(8561479, +), CAediting_349795(8561486, +), CAediting_349796(8561503, +), CAediting_349797(8561515, +), CAediting_349798(8563548, +), CAediting_349799(8563557, +), CAediting_349800(8563680, +), CAediting_349801(8563700, +), CAediting_349802(8563856, +), CAediting_349803(8563879, +), CAediting_349804(8563950, +), CAediting_349805(8563991, +), CAediting_349806(8563992, +), CAediting_349807(8564054, +), CAediting_349808(8564058, +), CAediting_349809(8564059, +), CAediting_349810(8564064, +), CAediting_349811(8565175, +), CAediting_349812(8565180, +), CAediting_349813(8565185, +), CAediting_349814(8565190, +), CAediting_349815(8565191, +), CAediting_349816(8565289, +), CAediting_349817(8565338, +), CAediting_349818(8565347, +), CAediting_349819(8565915, +), CAediting_349820(8565989, +), CAediting_349821(8565995, +), CAediting_349822(8566018, +), CAediting_349823(8566020, +), CAediting_349824(8566023, +), CAediting_349825(8566027, +), CAediting_349826(8566049, +), CAediting_349827(8566050, +), CAediting_349828(8566091, +), CAediting_349829(8566115, +), CAediting_349830(8566119, +), CAediting_349831(8566309, +), CAediting_349832(8566344, +), CAediting_349833(8566353, +), CAediting_349834(8566394, +), CAediting_349835(8566422, +), CAediting_349836(8566425, +), CAediting_349837(8566431, +), CAediting_349838(8566458, +), CAediting_349839(8566499, +), CAediting_349840(8566535, +), CAediting_349841(8566851, +), CAediting_349842(8566857, +), CAediting_349843(8566901, +), CAediting_349844(8566906, +), CAediting_349845(8566950, +), CAediting_349846(8566953, +), CAediting_349847(8566963, +), CAediting_349848(8566968, +), CAediting_349849(8566994, +), CAediting_349850(8566995, +), CAediting_349851(8567000, +), CAediting_349852(8567034, +), CAediting_349853(8567035, +), CAediting_349854(8567060, +), CAediting_349855(8567064, +), CAediting_349856(8567065, +), CAediting_349857(8568832, +), CAediting_349858(8568836, +), CAediting_349859(8568864, +), CAediting_349860(8568883, +), CAediting_349861(8568894, +), CAediting_349862(8568907, +), CAediting_349863(8568913, +), CAediting_349864(8568914, +), CAediting_349865(8568917, +), CAediting_349866(8568943, +), CAediting_349867(8568953, +), CAediting_349868(8568979, +), CAediting_349869(8568997, +), CAediting_349870(8569665, +), CAediting_349871(8569703, +), CAediting_349872(8569748, +), CAediting_349873(8569752, +), CAediting_349874(8570892, +), CAediting_349875(8570918, +), CAediting_349876(8570943, +), CAediting_349877(8570944, +), CAediting_349878(8570945, +), CAediting_349879(8570956, +), CAediting_349880(8573288, +), CAediting_349881(8573296, +), CAediting_349882(8573306, +), CAediting_349883(8573351, +), CAediting_349884(8574147, +), CAediting_349885(8574169, +), CAediting_349886(8574170, +), CAediting_349887(8574224, +), CAediting_349888(8574273, +), CAediting_349889(8574274, +), CAediting_349890(8574278, +), CAediting_349891(8574456, +), CAediting_349892(8574485, +), CAediting_349893(8574497, +), CAediting_349894(8574503, +), CAediting_349895(8574528, +), CAediting_349896(8574554, +), CAediting_349897(8574566, +), CAediting_349898(8574577, +), CAediting_349899(8574591, +), CAediting_349900(8574592, +), CAediting_349901(8574609, +), CAediting_349902(8574618, +), CAediting_349903(8574619, +), CAediting_349904(8574631, +), CAediting_349905(8576623, +), CAediting_349906(8576888, +), CAediting_349907(8577147, +), CAediting_349908(8577157, +), CAediting_349909(8577165, +), CAediting_349910(8577166, +), CAediting_349911(8577208, +), CAediting_349912(8577218, +), CAediting_349913(8577221, +), CAediting_349914(8577236, +), CAediting_349915(8577240, +), CAediting_349916(8577244, +), CAediting_349917(8577246, +), CAediting_349918(8577259, +), CAediting_349919(8577266, +), CAediting_349920(8577270, +), CAediting_349921(8577275, +), CAediting_349922(8577281, +), CAediting_349923(8577297, +), CAediting_349924(8577305, +), CAediting_349925(8577307, +), CAediting_349926(8577322, +), CAediting_349927(8577324, +), CAediting_349928(8577326, +), CAediting_349929(8577334, +), CAediting_349930(8577339, +), CAediting_349931(8577348, +), CAediting_349932(8577355, +), CAediting_349933(8577362, +), CAediting_349934(8577363, +), CAediting_349935(8577364, +), CAediting_349936(8577368, +), CAediting_349937(8577373, +), CAediting_349938(8577377, +), CAediting_349939(8578769, +), CAediting_349940(8578773, +), CAediting_349941(8578774, +), CAediting_349942(8578791, +), CAediting_349943(8578793, +), CAediting_349944(8578814, +), CAediting_349945(8578827, +), CAediting_349946(8578829, +), CAediting_349947(8578830, +), CAediting_349948(8578832, +), CAediting_349949(8578853, +), CAediting_349950(8578854, +), CAediting_349951(8578878, +), CAediting_349952(8578883, +), CAediting_349953(8578885, +), CAediting_349954(8578890, +), CAediting_349955(8578892, +), CAediting_349956(8578894, +), CAediting_349957(8578905, +), CAediting_349958(8578912, +), CAediting_349959(8578917, +), CAediting_349960(8578918, +), CAediting_349961(8578919, +), CAediting_349962(8578931, +), CAediting_349963(8578932, +), CAediting_349964(8578936, +), CAediting_349965(8578941, +), CAediting_349966(8578944, +), CAediting_349967(8578969, +), CAediting_349968(8578982, +), CAediting_349969(8588898, +), CAediting_349970(8589022, +),

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RNA editing positional annotations for GPR78 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_349779chr4_8561296_+ncRNA_intronic
CAediting_349780chr4_8561304_+ncRNA_intronic
CAediting_349781chr4_8561340_+ncRNA_intronic
CAediting_349782chr4_8561348_+ncRNA_intronic
CAediting_349783chr4_8561381_+ncRNA_intronic
CAediting_349784chr4_8561382_+ncRNA_intronic
CAediting_349785chr4_8561402_+ncRNA_intronic
CAediting_349786chr4_8561411_+ncRNA_intronic
CAediting_349787chr4_8561415_+ncRNA_intronic
CAediting_349788chr4_8561427_+ncRNA_intronic
CAediting_349789chr4_8561437_+ncRNA_intronic
CAediting_349790chr4_8561438_+ncRNA_intronic
CAediting_349791chr4_8561454_+ncRNA_intronic
CAediting_349792chr4_8561460_+ncRNA_intronic
CAediting_349793chr4_8561478_+ncRNA_intronic
CAediting_349794chr4_8561479_+ncRNA_intronic
CAediting_349795chr4_8561486_+ncRNA_intronic
CAediting_349796chr4_8561503_+ncRNA_intronic
CAediting_349797chr4_8561515_+ncRNA_intronic
CAediting_349798chr4_8563548_+ncRNA_intronic
CAediting_349799chr4_8563557_+ncRNA_intronic
CAediting_349800chr4_8563680_+ncRNA_intronic
CAediting_349801chr4_8563700_+ncRNA_intronic
CAediting_349802chr4_8563856_+ncRNA_intronic
CAediting_349803chr4_8563879_+ncRNA_intronic
CAediting_349804chr4_8563950_+ncRNA_intronic
CAediting_349805chr4_8563991_+ncRNA_intronic
CAediting_349806chr4_8563992_+ncRNA_intronic
CAediting_349807chr4_8564054_+ncRNA_intronic
CAediting_349808chr4_8564058_+ncRNA_intronic
CAediting_349809chr4_8564059_+ncRNA_intronic
CAediting_349810chr4_8564064_+ncRNA_intronic
CAediting_349811chr4_8565175_+ncRNA_intronic
CAediting_349812chr4_8565180_+ncRNA_intronic
CAediting_349813chr4_8565185_+ncRNA_intronic
CAediting_349814chr4_8565190_+ncRNA_intronic
CAediting_349815chr4_8565191_+ncRNA_intronic
CAediting_349816chr4_8565289_+ncRNA_intronic
CAediting_349817chr4_8565338_+ncRNA_intronic
CAediting_349818chr4_8565347_+ncRNA_intronic
CAediting_349819chr4_8565915_+ncRNA_intronic
CAediting_349820chr4_8565989_+ncRNA_intronic
CAediting_349821chr4_8565995_+ncRNA_intronic
CAediting_349822chr4_8566018_+ncRNA_intronic
CAediting_349823chr4_8566020_+ncRNA_intronic
CAediting_349824chr4_8566023_+ncRNA_intronic
CAediting_349825chr4_8566027_+ncRNA_intronic
CAediting_349826chr4_8566049_+ncRNA_intronic
CAediting_349827chr4_8566050_+ncRNA_intronic
CAediting_349828chr4_8566091_+ncRNA_intronic
CAediting_349829chr4_8566115_+ncRNA_intronic
CAediting_349830chr4_8566119_+ncRNA_intronic
CAediting_349831chr4_8566309_+ncRNA_intronic
CAediting_349832chr4_8566344_+ncRNA_intronic
CAediting_349833chr4_8566353_+ncRNA_intronic
CAediting_349834chr4_8566394_+ncRNA_intronic
CAediting_349835chr4_8566422_+ncRNA_intronic
CAediting_349836chr4_8566425_+ncRNA_intronic
CAediting_349837chr4_8566431_+ncRNA_intronic
CAediting_349838chr4_8566458_+ncRNA_intronic
CAediting_349839chr4_8566499_+ncRNA_intronic
CAediting_349840chr4_8566535_+ncRNA_intronic
CAediting_349841chr4_8566851_+ncRNA_intronic
CAediting_349842chr4_8566857_+ncRNA_intronic
CAediting_349843chr4_8566901_+ncRNA_intronic
CAediting_349844chr4_8566906_+ncRNA_intronic
CAediting_349845chr4_8566950_+ncRNA_intronic
CAediting_349846chr4_8566953_+ncRNA_intronic
CAediting_349847chr4_8566963_+ncRNA_intronic
CAediting_349848chr4_8566968_+ncRNA_intronic
CAediting_349849chr4_8566994_+ncRNA_intronic
CAediting_349850chr4_8566995_+ncRNA_intronic
CAediting_349851chr4_8567000_+ncRNA_intronic
CAediting_349852chr4_8567034_+ncRNA_intronic
CAediting_349853chr4_8567035_+ncRNA_intronic
CAediting_349854chr4_8567060_+ncRNA_intronic
CAediting_349855chr4_8567064_+ncRNA_intronic
CAediting_349856chr4_8567065_+ncRNA_intronic
CAediting_349857chr4_8568832_+ncRNA_intronic
CAediting_349858chr4_8568836_+ncRNA_intronic
CAediting_349859chr4_8568864_+ncRNA_intronic
CAediting_349860chr4_8568883_+ncRNA_intronic
CAediting_349861chr4_8568894_+ncRNA_intronic
CAediting_349862chr4_8568907_+ncRNA_intronic
CAediting_349863chr4_8568913_+ncRNA_intronic
CAediting_349864chr4_8568914_+ncRNA_intronic
CAediting_349865chr4_8568917_+ncRNA_intronic
CAediting_349866chr4_8568943_+ncRNA_intronic
CAediting_349867chr4_8568953_+ncRNA_intronic
CAediting_349868chr4_8568979_+ncRNA_intronic
CAediting_349869chr4_8568997_+ncRNA_intronic
CAediting_349870chr4_8569665_+ncRNA_intronic
CAediting_349871chr4_8569703_+ncRNA_intronic
CAediting_349872chr4_8569748_+ncRNA_intronic
CAediting_349873chr4_8569752_+ncRNA_intronic
CAediting_349874chr4_8570892_+ncRNA_intronic
CAediting_349875chr4_8570918_+ncRNA_intronic
CAediting_349876chr4_8570943_+ncRNA_intronic
CAediting_349877chr4_8570944_+ncRNA_intronic
CAediting_349878chr4_8570945_+ncRNA_intronic
CAediting_349879chr4_8570956_+ncRNA_intronic
CAediting_349880chr4_8573288_+ncRNA_intronic
CAediting_349881chr4_8573296_+ncRNA_intronic
CAediting_349882chr4_8573306_+ncRNA_intronic
CAediting_349883chr4_8573351_+ncRNA_intronic
CAediting_349884chr4_8574147_+ncRNA_intronic
CAediting_349885chr4_8574169_+ncRNA_intronic
CAediting_349886chr4_8574170_+ncRNA_intronic
CAediting_349887chr4_8574224_+ncRNA_intronic
CAediting_349888chr4_8574273_+ncRNA_intronic
CAediting_349889chr4_8574274_+ncRNA_intronic
CAediting_349890chr4_8574278_+ncRNA_intronic
CAediting_349891chr4_8574456_+ncRNA_intronic
CAediting_349892chr4_8574485_+ncRNA_intronic
CAediting_349893chr4_8574497_+ncRNA_intronic
CAediting_349894chr4_8574503_+ncRNA_intronic
CAediting_349895chr4_8574528_+ncRNA_intronic
CAediting_349896chr4_8574554_+ncRNA_intronic
CAediting_349897chr4_8574566_+ncRNA_intronic
CAediting_349898chr4_8574577_+ncRNA_intronic
CAediting_349899chr4_8574591_+ncRNA_intronic
CAediting_349900chr4_8574592_+ncRNA_intronic
CAediting_349901chr4_8574609_+ncRNA_intronic
CAediting_349902chr4_8574618_+ncRNA_intronic
CAediting_349903chr4_8574619_+ncRNA_intronic
CAediting_349904chr4_8574631_+ncRNA_intronic
CAediting_349905chr4_8576623_+ncRNA_intronic
CAediting_349906chr4_8576888_+ncRNA_intronic
CAediting_349907chr4_8577147_+ncRNA_intronic
CAediting_349908chr4_8577157_+ncRNA_intronic
CAediting_349909chr4_8577165_+ncRNA_intronic
CAediting_349910chr4_8577166_+ncRNA_intronic
CAediting_349911chr4_8577208_+ncRNA_intronic
CAediting_349912chr4_8577218_+ncRNA_intronic
CAediting_349913chr4_8577221_+ncRNA_intronic
CAediting_349914chr4_8577236_+ncRNA_intronic
CAediting_349915chr4_8577240_+ncRNA_intronic
CAediting_349916chr4_8577244_+ncRNA_intronic
CAediting_349917chr4_8577246_+ncRNA_intronic
CAediting_349918chr4_8577259_+ncRNA_intronic
CAediting_349919chr4_8577266_+ncRNA_intronic
CAediting_349920chr4_8577270_+ncRNA_intronic
CAediting_349921chr4_8577275_+ncRNA_intronic
CAediting_349922chr4_8577281_+ncRNA_intronic
CAediting_349923chr4_8577297_+ncRNA_intronic
CAediting_349924chr4_8577305_+ncRNA_intronic
CAediting_349925chr4_8577307_+ncRNA_intronic
CAediting_349926chr4_8577322_+ncRNA_intronic
CAediting_349927chr4_8577324_+ncRNA_intronic
CAediting_349928chr4_8577326_+ncRNA_intronic
CAediting_349929chr4_8577334_+ncRNA_intronic
CAediting_349930chr4_8577339_+ncRNA_intronic
CAediting_349931chr4_8577348_+ncRNA_intronic
CAediting_349932chr4_8577355_+ncRNA_intronic
CAediting_349933chr4_8577362_+ncRNA_intronic
CAediting_349934chr4_8577363_+ncRNA_intronic
CAediting_349935chr4_8577364_+ncRNA_intronic
CAediting_349936chr4_8577368_+ncRNA_intronic
CAediting_349937chr4_8577373_+ncRNA_intronic
CAediting_349938chr4_8577377_+ncRNA_intronic
CAediting_349939chr4_8578769_+ncRNA_intronic
CAediting_349940chr4_8578773_+ncRNA_intronic
CAediting_349941chr4_8578774_+ncRNA_intronic
CAediting_349942chr4_8578791_+ncRNA_intronic
CAediting_349943chr4_8578793_+ncRNA_intronic
CAediting_349944chr4_8578814_+ncRNA_intronic
CAediting_349945chr4_8578827_+ncRNA_intronic
CAediting_349946chr4_8578829_+ncRNA_intronic
CAediting_349947chr4_8578830_+ncRNA_intronic
CAediting_349948chr4_8578832_+ncRNA_intronic
CAediting_349949chr4_8578853_+ncRNA_intronic
CAediting_349950chr4_8578854_+ncRNA_intronic
CAediting_349951chr4_8578878_+ncRNA_intronic
CAediting_349952chr4_8578883_+ncRNA_intronic
CAediting_349953chr4_8578885_+ncRNA_intronic
CAediting_349954chr4_8578890_+ncRNA_intronic
CAediting_349955chr4_8578892_+ncRNA_intronic
CAediting_349956chr4_8578894_+ncRNA_intronic
CAediting_349957chr4_8578905_+ncRNA_intronic
CAediting_349958chr4_8578912_+ncRNA_intronic
CAediting_349959chr4_8578917_+ncRNA_intronic
CAediting_349960chr4_8578918_+ncRNA_intronic
CAediting_349961chr4_8578919_+ncRNA_intronic
CAediting_349962chr4_8578931_+ncRNA_intronic
CAediting_349963chr4_8578932_+ncRNA_intronic
CAediting_349964chr4_8578936_+ncRNA_intronic
CAediting_349965chr4_8578941_+ncRNA_intronic
CAediting_349966chr4_8578944_+ncRNA_intronic
CAediting_349967chr4_8578969_+ncRNA_intronic
CAediting_349968chr4_8578982_+ncRNA_intronic
CAediting_349969chr4_8588898_+intronic
CAediting_349970chr4_8589022_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_349779chr4_8561296_+SINEAluAluSg
CAediting_349780chr4_8561304_+SINEAluAluSg
CAediting_349781chr4_8561340_+SINEAluAluSg
CAediting_349782chr4_8561348_+SINEAluAluSg
CAediting_349783chr4_8561381_+SINEAluAluSg
CAediting_349784chr4_8561382_+SINEAluAluSg
CAediting_349785chr4_8561402_+SINEAluAluSg
CAediting_349786chr4_8561411_+SINEAluAluSg
CAediting_349787chr4_8561415_+SINEAluAluSg
CAediting_349788chr4_8561427_+SINEAluAluSg
CAediting_349789chr4_8561437_+SINEAluAluSg
CAediting_349790chr4_8561438_+SINEAluAluSg
CAediting_349791chr4_8561454_+SINEAluAluSg
CAediting_349792chr4_8561460_+SINEAluAluSg
CAediting_349793chr4_8561478_+SINEAluAluSg
CAediting_349794chr4_8561479_+SINEAluAluSg
CAediting_349795chr4_8561486_+SINEAluAluSg
CAediting_349796chr4_8561503_+SINEAluAluSg
CAediting_349797chr4_8561515_+SINEAluAluSg
CAediting_349798chr4_8563548_+SINEAluAluSx1
CAediting_349799chr4_8563557_+SINEAluAluSx1
CAediting_349800chr4_8563680_+SINEAluAluSx1
CAediting_349801chr4_8563700_+SINEAluAluSx1
CAediting_349802chr4_8563856_+SINEAluAluSg
CAediting_349803chr4_8563879_+SINEAluAluSg
CAediting_349804chr4_8563950_+SINEAluAluSg
CAediting_349805chr4_8563991_+SINEAluAluSg
CAediting_349806chr4_8563992_+SINEAluAluSg
CAediting_349807chr4_8564054_+SINEAluAluSg
CAediting_349808chr4_8564058_+SINEAluAluSg
CAediting_349809chr4_8564059_+SINEAluAluSg
CAediting_349810chr4_8564064_+SINEAluAluSg
CAediting_349811chr4_8565175_+SINEAluAluYc
CAediting_349812chr4_8565180_+SINEAluAluYc
CAediting_349813chr4_8565185_+SINEAluAluYc
CAediting_349814chr4_8565190_+SINEAluAluYc
CAediting_349815chr4_8565191_+SINEAluAluYc
CAediting_349816chr4_8565289_+SINEAluAluYc
CAediting_349817chr4_8565338_+SINEAluAluYc
CAediting_349818chr4_8565347_+SINEAluAluYc
CAediting_349819chr4_8565915_+SINEAluAluSq2
CAediting_349820chr4_8565989_+SINEAluAluSq2
CAediting_349821chr4_8565995_+SINEAluAluSq2
CAediting_349822chr4_8566018_+SINEAluAluSq2
CAediting_349823chr4_8566020_+SINEAluAluSq2
CAediting_349824chr4_8566023_+SINEAluAluSq2
CAediting_349825chr4_8566027_+SINEAluAluSq2
CAediting_349826chr4_8566049_+SINEAluAluSq2
CAediting_349827chr4_8566050_+SINEAluAluSq2
CAediting_349828chr4_8566091_+SINEAluAluSq2
CAediting_349829chr4_8566115_+SINEAluAluSq2
CAediting_349830chr4_8566119_+SINEAluAluSq2
CAediting_349831chr4_8566309_+SINEAluAluSz6
CAediting_349832chr4_8566344_+SINEAluAluSz6
CAediting_349833chr4_8566353_+SINEAluAluSz6
CAediting_349834chr4_8566394_+SINEAluAluSz6
CAediting_349835chr4_8566422_+SINEAluAluSz6
CAediting_349836chr4_8566425_+SINEAluAluSz6
CAediting_349837chr4_8566431_+SINEAluAluSz6
CAediting_349838chr4_8566458_+SINEAluAluSz6
CAediting_349839chr4_8566499_+SINEAluAluSz6
CAediting_349840chr4_8566535_+SINEAluAluSz6
CAediting_349841chr4_8566851_+SINEAluAluSc5
CAediting_349842chr4_8566857_+SINEAluAluSc5
CAediting_349843chr4_8566901_+SINEAluAluSc5
CAediting_349844chr4_8566906_+SINEAluAluSc5
CAediting_349845chr4_8566950_+SINEAluAluSc5
CAediting_349846chr4_8566953_+SINEAluAluSc5
CAediting_349847chr4_8566963_+SINEAluAluSc5
CAediting_349848chr4_8566968_+SINEAluAluSc5
CAediting_349849chr4_8566994_+SINEAluAluSc5
CAediting_349850chr4_8566995_+SINEAluAluSc5
CAediting_349851chr4_8567000_+SINEAluAluSc5
CAediting_349852chr4_8567034_+SINEAluAluSc5
CAediting_349853chr4_8567035_+SINEAluAluSc5
CAediting_349854chr4_8567060_+SINEAluAluSc5
CAediting_349855chr4_8567064_+SINEAluAluSc5
CAediting_349856chr4_8567065_+SINEAluAluSc5
CAediting_349857chr4_8568832_+SINEAluAluSq2
CAediting_349858chr4_8568836_+SINEAluAluSq2
CAediting_349859chr4_8568864_+SINEAluAluSq2
CAediting_349860chr4_8568883_+SINEAluAluSq2
CAediting_349861chr4_8568894_+SINEAluAluSq2
CAediting_349862chr4_8568907_+SINEAluAluSq2
CAediting_349863chr4_8568913_+SINEAluAluSq2
CAediting_349864chr4_8568914_+SINEAluAluSq2
CAediting_349865chr4_8568917_+SINEAluAluSq2
CAediting_349866chr4_8568943_+SINEAluAluSq2
CAediting_349867chr4_8568953_+SINEAluAluSq2
CAediting_349868chr4_8568979_+SINEAluAluSq2
CAediting_349869chr4_8568997_+SINEAluAluSq2
CAediting_349870chr4_8569665_+SINEAluAluSx
CAediting_349871chr4_8569703_+SINEAluAluSx
CAediting_349872chr4_8569748_+SINEAluAluSx
CAediting_349873chr4_8569752_+SINEAluAluSx
CAediting_349874chr4_8570892_+SINEAluAluSz
CAediting_349875chr4_8570918_+SINEAluAluSz
CAediting_349876chr4_8570943_+SINEAluAluSz
CAediting_349877chr4_8570944_+SINEAluAluSz
CAediting_349878chr4_8570945_+SINEAluAluSz
CAediting_349879chr4_8570956_+SINEAluAluSz
CAediting_349880chr4_8573288_+SINEAluAluJo
CAediting_349881chr4_8573296_+SINEAluAluJo
CAediting_349882chr4_8573306_+SINEAluAluJo
CAediting_349883chr4_8573351_+SINEAluAluJo
CAediting_349884chr4_8574147_+SINEAluAluSz6
CAediting_349885chr4_8574169_+SINEAluAluSz6
CAediting_349886chr4_8574170_+SINEAluAluSz6
CAediting_349887chr4_8574224_+SINEAluAluSz6
CAediting_349888chr4_8574273_+SINEAluAluSz6
CAediting_349889chr4_8574274_+SINEAluAluSz6
CAediting_349890chr4_8574278_+SINEAluAluSz6
CAediting_349891chr4_8574456_+SINEAluAluJb
CAediting_349892chr4_8574485_+SINEAluAluJb
CAediting_349893chr4_8574497_+SINEAluAluJb
CAediting_349894chr4_8574503_+SINEAluAluJb
CAediting_349895chr4_8574528_+SINEAluAluJb
CAediting_349896chr4_8574554_+SINEAluAluJb
CAediting_349897chr4_8574566_+SINEAluAluJb
CAediting_349898chr4_8574577_+SINEAluAluJb
CAediting_349899chr4_8574591_+SINEAluAluJb
CAediting_349900chr4_8574592_+SINEAluAluJb
CAediting_349901chr4_8574609_+SINEAluAluJb
CAediting_349902chr4_8574618_+SINEAluAluJb
CAediting_349903chr4_8574619_+SINEAluAluJb
CAediting_349904chr4_8574631_+SINEAluAluJb
CAediting_349905chr4_8576623_+SINEAluAluSg
CAediting_349906chr4_8576888_+SINEAluAluSg
CAediting_349937chr4_8577373_+LINEL2L2b
CAediting_349938chr4_8577377_+LINEL2L2b
CAediting_349969chr4_8588898_+SINEAluAluJb
CAediting_349970chr4_8589022_+SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for GPR78

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000155269.10.GPR78.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000155269.10.GPR78.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GPR78

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for GPR78

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GPR78

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000155269.10ENST00000514302hsa-miR-605-3p860399986040068mer-1a86039858604006142-15.26
CAediting_748296chr10_51299626_+ENSG00000155269.10ENST00000514302hsa-miR-605-3p860614186061477mer-m886061268606148148-15.07
CAediting_1368054chr19_46709310_-ENSG00000155269.10ENST00000514302hsa-miR-320e860122486012307mer-m886012148601231143-14.55
CAediting_1368054chr19_46709310_-ENSG00000155269.10ENST00000514302hsa-miR-320e860125886012647mer-m886012498601265150-17.46
CAediting_86358chr1_109598906_+ENSG00000155269.10ENST00000514302hsa-miR-197-5p860612386061286mer86061168606139141-28.74
CAediting_524911chr7_5495852_-ENSG00000155269.10ENST00000514302hsa-miR-589-3p860607486060818mer-1a86060568606081147-17.18
CAediting_442554chr5_154685830_+ENSG00000155269.10ENST00000514302hsa-miR-1303860737286073787mer-m886073588607379142-17.7
CAediting_86358chr1_109598906_+ENSG00000155269.10ENST00000514302hsa-miR-197-5p861206086120667mer-m886120458612067153-27.2
CAediting_1368054chr19_46709310_-ENSG00000155269.10ENST00000514302hsa-miR-320e861947786194837mer-m886194678619484140-15.18
CAediting_580943chr7_100356700_+ENSG00000155269.10ENST00000514302hsa-miR-6840-3p861966786196737mer-m886196538619674148-32.11
CAediting_1524209chrX_134546392_-ENSG00000155269.10ENST00000514302hsa-miR-503-5p861971786197248mer-1a86197028619724145-20.61

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GPR78

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000514302.4nonsense_mediated_decaySoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_349939ENST00000514302.4chr4_8578769_+-2077.70-2078.60-2131.00
CAediting_349940ENST00000514302.4chr4_8578773_+-2081.60-2078.60-2131.00
CAediting_349941ENST00000514302.4chr4_8578774_+-2078.60-2078.60-2131.00
CAediting_349942ENST00000514302.4chr4_8578791_+-2079.10-2078.60-2131.00
CAediting_349943ENST00000514302.4chr4_8578793_+-2082.50-2078.60-2131.00
CAediting_349944ENST00000514302.4chr4_8578814_+-2078.70-2078.60-2131.00
CAediting_349945ENST00000514302.4chr4_8578827_+-2081.40-2078.60-2131.00
CAediting_349946ENST00000514302.4chr4_8578829_+-2079.50-2078.60-2131.00
CAediting_349947ENST00000514302.4chr4_8578830_+-2078.50-2078.60-2131.00
CAediting_349948ENST00000514302.4chr4_8578832_+-2079.90-2078.60-2131.00
CAediting_349949ENST00000514302.4chr4_8578853_+-2079.50-2078.60-2131.00
CAediting_349950ENST00000514302.4chr4_8578854_+-2082.90-2078.60-2131.00
CAediting_349951ENST00000514302.4chr4_8578878_+-2078.60-2078.60-2131.00
CAediting_349952ENST00000514302.4chr4_8578883_+-2083.80-2078.60-2131.00
CAediting_349953ENST00000514302.4chr4_8578885_+-2083.90-2078.60-2131.00
CAediting_349954ENST00000514302.4chr4_8578890_+-2081.40-2078.60-2131.00
CAediting_349955ENST00000514302.4chr4_8578892_+-2079.70-2078.60-2131.00
CAediting_349956ENST00000514302.4chr4_8578894_+-2083.50-2078.60-2131.00
CAediting_349957ENST00000514302.4chr4_8578905_+-2079.80-2078.60-2131.00
CAediting_349958ENST00000514302.4chr4_8578912_+-2084.00-2078.60-2131.00
CAediting_349959ENST00000514302.4chr4_8578917_+-2078.70-2078.60-2131.00
CAediting_349960ENST00000514302.4chr4_8578918_+-2081.80-2078.60-2131.00
CAediting_349961ENST00000514302.4chr4_8578919_+-2081.50-2078.60-2131.00
CAediting_349962ENST00000514302.4chr4_8578931_+-2083.70-2078.60-2131.00
CAediting_349963ENST00000514302.4chr4_8578932_+-2080.90-2078.60-2131.00
CAediting_349964ENST00000514302.4chr4_8578936_+-2078.20-2078.60-2131.00
CAediting_349965ENST00000514302.4chr4_8578941_+-2083.40-2078.60-2131.00
CAediting_349966ENST00000514302.4chr4_8578944_+-2082.80-2078.60-2131.00
CAediting_349967ENST00000514302.4chr4_8578969_+-2083.20-2078.60-2131.00
CAediting_349968ENST00000514302.4chr4_8578982_+-2082.30-2078.60-2131.00

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Relation with ADAR for GPR78

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_349935chr4_8577364_+0.001430651409467130.438889819651448....
BLCACAediting_349938chr4_8577377_+0.01697893152465410.286560826734381....
BLCACAediting_349943chr4_8578793_+0.003071123836876110.3230796333634440.003837468199140640.315912153086645..
BLCACAediting_349945chr4_8578827_+0.02810912180653020.288438176727353....
BLCACAediting_349947chr4_8578830_+0.02049669016521370.258707394138668....
BLCACAediting_349951chr4_8578878_+0.009463394679851280.283257991209211..0.04470878130886120.220958527005597
BLCACAediting_349952chr4_8578883_+0.01051938600216590.301851192594315....

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Relation with cancer stages for GPR78

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BLCApathologic_stageCAediting_349963chr4_8578932_+0.0413393680922294-0.190575864696443

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Relation with survival for GPR78

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BLCACAediting_349963chr4_8578932_+0.0005252952391500140.0019628320.7171

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RelatedDrugs for GPR78

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GPR78

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
GPR78C0005586Bipolar Disorder1PSYGENET
GPR78C0036341Schizophrenia1PSYGENET