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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: KCNMB3 (CAeditome ID:27094)

Gene summary for KCNMB3

check button Gene summary
Gene informationGene symbol

KCNMB3

Gene ID

27094

Gene namepotassium calcium-activated channel subfamily M regulatory beta subunit 3
SynonymsBKBETA3|HBETA3|K(VCA)BETA-3|KCNMB2|KCNMBL|SLO-BETA-3|SLOBETA3
Cytomap

3q26.32

Type of geneprotein-coding
Descriptioncalcium-activated potassium channel subunit beta-3BK channel beta subunit 3BK channel subunit beta-3MaxiK channel beta-subunit 3big potassium channel beta subunit 3calcium-activated potassium channel regulatory subunitcalcium-activated potassium cha
Modification date20210518
UniProtAcc

Q9NPA1

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
KCNMB3

GO:0015269

Calcium-activated potassium channel subunit beta-3

10692449

KCNMB3

GO:0001508

Calcium-activated potassium channel subunit beta-3

10692449

KCNMB3

GO:0005513

Calcium-activated potassium channel subunit beta-3

10692449

KCNMB3

GO:0006813

Calcium-activated potassium channel subunit beta-3

10692449

KCNMB3

GO:0019228

Calcium-activated potassium channel subunit beta-3

10692449

KCNMB3

GO:0005887

Calcium-activated potassium channel subunit beta-3

10692449

KCNMB3

GO:0008076

Calcium-activated potassium channel subunit beta-3

10692449


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RNA A-to-I events for KCNMB3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000171121.15

check button RNA A-to-I editing events in Cancer.
CAediting_325888(179251757, -), CAediting_325889(179251763, -), CAediting_325890(179251765, -), CAediting_325891(179251779, -), CAediting_325892(179251790, -), CAediting_325893(179251795, -), CAediting_325894(179251818, -), CAediting_325895(179251833, -), CAediting_325896(179251837, -), CAediting_325897(179251847, -), CAediting_325898(179251850, -), CAediting_325899(179251854, -), CAediting_325900(179251859, -), CAediting_325901(179251860, -), CAediting_325902(179251878, -), CAediting_325903(179251886, -), CAediting_325904(179251890, -), CAediting_325905(179251892, -), CAediting_325906(179251898, -), CAediting_325907(179251899, -), CAediting_325908(179251900, -), CAediting_325909(179251917, -), CAediting_325910(179251925, -), CAediting_325911(179251949, -), CAediting_325912(179251954, -), CAediting_325913(179251957, -), CAediting_325914(179251992, -), CAediting_325915(179251993, -), CAediting_325916(179252009, -), CAediting_325917(179252765, -), CAediting_325918(179252804, -), CAediting_325919(179252821, -), CAediting_325920(179252828, -), CAediting_325921(179252829, -), CAediting_325922(179252843, -), CAediting_325923(179252856, -), CAediting_325924(179252860, -), CAediting_325925(179252864, -), CAediting_325926(179252896, -), CAediting_325927(179252900, -), CAediting_325928(179252901, -), CAediting_325929(179252902, -), CAediting_325930(179252909, -), CAediting_325931(179252910, -), CAediting_325932(179252911, -), CAediting_325933(179252914, -), CAediting_325934(179252925, -), CAediting_325935(179252931, -), CAediting_325936(179252935, -), CAediting_325937(179252956, -), CAediting_325938(179252959, -), CAediting_325939(179252964, -), CAediting_325940(179252994, -), CAediting_325941(179253002, -), CAediting_325942(179253003, -), CAediting_325943(179253019, -), CAediting_325944(179253546, -), CAediting_325945(179253549, -), CAediting_325946(179253623, -), CAediting_325947(179253634, -), CAediting_325948(179253656, -), CAediting_325949(179253684, -), CAediting_325950(179253694, -), CAediting_325951(179253723, -), CAediting_325952(179254566, -), CAediting_325953(179254568, -), CAediting_325954(179254575, -), CAediting_325955(179254592, -), CAediting_325956(179254597, -), CAediting_325957(179254605, -), CAediting_325958(179254622, -), CAediting_325959(179254626, -), CAediting_325960(179254663, -), CAediting_325961(179254664, -), CAediting_325962(179254684, -), CAediting_325963(179254690, -), CAediting_325964(179254693, -), CAediting_325965(179254694, -), CAediting_325966(179254696, -), CAediting_325967(179254719, -), CAediting_325968(179254755, -), CAediting_325969(179254793, -), CAediting_325970(179254796, -), CAediting_325971(179254798, -), CAediting_325972(179254930, -), CAediting_325973(179254962, -), CAediting_325974(179254982, -), CAediting_325975(179254999, -), CAediting_325976(179255053, -), CAediting_325977(179255056, -), CAediting_325978(179255070, -), CAediting_325979(179255082, -), CAediting_325980(179255113, -), CAediting_325981(179255132, -), CAediting_325982(179255159, -), CAediting_325983(179255163, -), CAediting_325984(179256179, -), CAediting_325985(179256191, -), CAediting_325986(179256270, -), CAediting_325987(179256288, -), CAediting_325988(179256292, -), CAediting_325989(179256314, -), CAediting_325990(179256324, -), CAediting_325991(179256336, -), CAediting_325992(179256389, -), CAediting_325993(179256434, -), CAediting_325994(179256917, -), CAediting_325995(179256932, -), CAediting_325996(179256944, -), CAediting_325997(179256957, -), CAediting_325998(179256990, -), CAediting_325999(179256996, -), CAediting_326000(179257052, -), CAediting_326001(179257078, -), CAediting_326002(179257081, -), CAediting_326003(179257094, -), CAediting_326004(179257095, -), CAediting_326005(179257096, -), CAediting_326006(179257102, -), CAediting_326007(179257116, -), CAediting_326008(179257119, -), CAediting_326009(179257148, -), CAediting_326010(179257722, -), CAediting_326011(179257773, -), CAediting_326012(179257778, -), CAediting_326013(179257789, -), CAediting_326014(179257796, -), CAediting_326015(179257797, -), CAediting_326016(179257829, -), CAediting_326017(179257833, -), CAediting_326018(179257834, -), CAediting_326019(179257850, -), CAediting_326020(179257947, -), CAediting_326021(179257950, -), CAediting_326022(179257952, -), CAediting_326023(179257953, -), CAediting_326024(179257982, -), CAediting_326025(179257996, -), CAediting_326026(179258013, -), CAediting_326027(179258017, -), CAediting_326028(179258022, -), CAediting_326029(179258045, -), CAediting_326030(179258056, -), CAediting_326031(179258059, -), CAediting_326032(179258079, -), CAediting_326033(179258104, -), CAediting_326034(179258136, -),

Top

RNA editing positional annotations for KCNMB3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_325888chr3_179251757_-intronic
CAediting_325889chr3_179251763_-intronic
CAediting_325890chr3_179251765_-intronic
CAediting_325891chr3_179251779_-intronic
CAediting_325892chr3_179251790_-intronic
CAediting_325893chr3_179251795_-intronic
CAediting_325894chr3_179251818_-intronic
CAediting_325895chr3_179251833_-intronic
CAediting_325896chr3_179251837_-intronic
CAediting_325897chr3_179251847_-intronic
CAediting_325898chr3_179251850_-intronic
CAediting_325899chr3_179251854_-intronic
CAediting_325900chr3_179251859_-intronic
CAediting_325901chr3_179251860_-intronic
CAediting_325902chr3_179251878_-intronic
CAediting_325903chr3_179251886_-intronic
CAediting_325904chr3_179251890_-intronic
CAediting_325905chr3_179251892_-intronic
CAediting_325906chr3_179251898_-intronic
CAediting_325907chr3_179251899_-intronic
CAediting_325908chr3_179251900_-intronic
CAediting_325909chr3_179251917_-intronic
CAediting_325910chr3_179251925_-intronic
CAediting_325911chr3_179251949_-intronic
CAediting_325912chr3_179251954_-intronic
CAediting_325913chr3_179251957_-intronic
CAediting_325914chr3_179251992_-intronic
CAediting_325915chr3_179251993_-intronic
CAediting_325916chr3_179252009_-intronic
CAediting_325917chr3_179252765_-intronic
CAediting_325918chr3_179252804_-intronic
CAediting_325919chr3_179252821_-intronic
CAediting_325920chr3_179252828_-intronic
CAediting_325921chr3_179252829_-intronic
CAediting_325922chr3_179252843_-intronic
CAediting_325923chr3_179252856_-intronic
CAediting_325924chr3_179252860_-intronic
CAediting_325925chr3_179252864_-intronic
CAediting_325926chr3_179252896_-intronic
CAediting_325927chr3_179252900_-intronic
CAediting_325928chr3_179252901_-intronic
CAediting_325929chr3_179252902_-intronic
CAediting_325930chr3_179252909_-intronic
CAediting_325931chr3_179252910_-intronic
CAediting_325932chr3_179252911_-intronic
CAediting_325933chr3_179252914_-intronic
CAediting_325934chr3_179252925_-intronic
CAediting_325935chr3_179252931_-intronic
CAediting_325936chr3_179252935_-intronic
CAediting_325937chr3_179252956_-intronic
CAediting_325938chr3_179252959_-intronic
CAediting_325939chr3_179252964_-intronic
CAediting_325940chr3_179252994_-intronic
CAediting_325941chr3_179253002_-intronic
CAediting_325942chr3_179253003_-intronic
CAediting_325943chr3_179253019_-intronic
CAediting_325944chr3_179253546_-intronic
CAediting_325945chr3_179253549_-intronic
CAediting_325946chr3_179253623_-intronic
CAediting_325947chr3_179253634_-intronic
CAediting_325948chr3_179253656_-intronic
CAediting_325949chr3_179253684_-intronic
CAediting_325950chr3_179253694_-intronic
CAediting_325951chr3_179253723_-intronic
CAediting_325952chr3_179254566_-intronic
CAediting_325953chr3_179254568_-intronic
CAediting_325954chr3_179254575_-intronic
CAediting_325955chr3_179254592_-intronic
CAediting_325956chr3_179254597_-intronic
CAediting_325957chr3_179254605_-intronic
CAediting_325958chr3_179254622_-intronic
CAediting_325959chr3_179254626_-intronic
CAediting_325960chr3_179254663_-intronic
CAediting_325961chr3_179254664_-intronic
CAediting_325962chr3_179254684_-intronic
CAediting_325963chr3_179254690_-intronic
CAediting_325964chr3_179254693_-intronic
CAediting_325965chr3_179254694_-intronic
CAediting_325966chr3_179254696_-intronic
CAediting_325967chr3_179254719_-intronic
CAediting_325968chr3_179254755_-intronic
CAediting_325969chr3_179254793_-intronic
CAediting_325970chr3_179254796_-intronic
CAediting_325971chr3_179254798_-intronic
CAediting_325972chr3_179254930_-intronic
CAediting_325973chr3_179254962_-intronic
CAediting_325974chr3_179254982_-intronic
CAediting_325975chr3_179254999_-intronic
CAediting_325976chr3_179255053_-intronic
CAediting_325977chr3_179255056_-intronic
CAediting_325978chr3_179255070_-intronic
CAediting_325979chr3_179255082_-intronic
CAediting_325980chr3_179255113_-intronic
CAediting_325981chr3_179255132_-intronic
CAediting_325982chr3_179255159_-intronic
CAediting_325983chr3_179255163_-intronic
CAediting_325984chr3_179256179_-intronic
CAediting_325985chr3_179256191_-intronic
CAediting_325986chr3_179256270_-intronic
CAediting_325987chr3_179256288_-intronic
CAediting_325988chr3_179256292_-intronic
CAediting_325989chr3_179256314_-intronic
CAediting_325990chr3_179256324_-intronic
CAediting_325991chr3_179256336_-intronic
CAediting_325992chr3_179256389_-intronic
CAediting_325993chr3_179256434_-intronic
CAediting_325994chr3_179256917_-intronic
CAediting_325995chr3_179256932_-intronic
CAediting_325996chr3_179256944_-intronic
CAediting_325997chr3_179256957_-intronic
CAediting_325998chr3_179256990_-intronic
CAediting_325999chr3_179256996_-intronic
CAediting_326000chr3_179257052_-intronic
CAediting_326001chr3_179257078_-intronic
CAediting_326002chr3_179257081_-intronic
CAediting_326003chr3_179257094_-intronic
CAediting_326004chr3_179257095_-intronic
CAediting_326005chr3_179257096_-intronic
CAediting_326006chr3_179257102_-intronic
CAediting_326007chr3_179257116_-intronic
CAediting_326008chr3_179257119_-intronic
CAediting_326009chr3_179257148_-intronic
CAediting_326010chr3_179257722_-intronic
CAediting_326011chr3_179257773_-intronic
CAediting_326012chr3_179257778_-intronic
CAediting_326013chr3_179257789_-intronic
CAediting_326014chr3_179257796_-intronic
CAediting_326015chr3_179257797_-intronic
CAediting_326016chr3_179257829_-intronic
CAediting_326017chr3_179257833_-intronic
CAediting_326018chr3_179257834_-intronic
CAediting_326019chr3_179257850_-intronic
CAediting_326020chr3_179257947_-intronic
CAediting_326021chr3_179257950_-intronic
CAediting_326022chr3_179257952_-intronic
CAediting_326023chr3_179257953_-intronic
CAediting_326024chr3_179257982_-intronic
CAediting_326025chr3_179257996_-intronic
CAediting_326026chr3_179258013_-intronic
CAediting_326027chr3_179258017_-intronic
CAediting_326028chr3_179258022_-intronic
CAediting_326029chr3_179258045_-intronic
CAediting_326030chr3_179258056_-intronic
CAediting_326031chr3_179258059_-intronic
CAediting_326032chr3_179258079_-intronic
CAediting_326033chr3_179258104_-intronic
CAediting_326034chr3_179258136_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_325888chr3_179251757_-SINEAluAluSx1
CAediting_325889chr3_179251763_-SINEAluAluSx1
CAediting_325890chr3_179251765_-SINEAluAluSx1
CAediting_325891chr3_179251779_-SINEAluAluSx1
CAediting_325892chr3_179251790_-SINEAluAluSx1
CAediting_325893chr3_179251795_-SINEAluAluSx1
CAediting_325894chr3_179251818_-SINEAluAluSx1
CAediting_325895chr3_179251833_-SINEAluAluSx1
CAediting_325896chr3_179251837_-SINEAluAluSx1
CAediting_325897chr3_179251847_-SINEAluAluSx1
CAediting_325898chr3_179251850_-SINEAluAluSx1
CAediting_325899chr3_179251854_-SINEAluAluSx1
CAediting_325900chr3_179251859_-SINEAluAluSx1
CAediting_325901chr3_179251860_-SINEAluAluSx1
CAediting_325902chr3_179251878_-SINEAluAluSx1
CAediting_325903chr3_179251886_-SINEAluAluSx1
CAediting_325904chr3_179251890_-SINEAluAluSx1
CAediting_325905chr3_179251892_-SINEAluAluSx1
CAediting_325906chr3_179251898_-SINEAluAluSx1
CAediting_325907chr3_179251899_-SINEAluAluSx1
CAediting_325908chr3_179251900_-SINEAluAluSx1
CAediting_325909chr3_179251917_-SINEAluAluSx1
CAediting_325910chr3_179251925_-SINEAluAluSx1
CAediting_325911chr3_179251949_-SINEAluAluSx1
CAediting_325912chr3_179251954_-SINEAluAluSx1
CAediting_325913chr3_179251957_-SINEAluAluSx1
CAediting_325914chr3_179251992_-SINEAluAluSx1
CAediting_325915chr3_179251993_-SINEAluAluSx1
CAediting_325916chr3_179252009_-SINEAluAluSx1
CAediting_325917chr3_179252765_-SINEAluAluY
CAediting_325918chr3_179252804_-SINEAluAluY
CAediting_325919chr3_179252821_-SINEAluAluY
CAediting_325920chr3_179252828_-SINEAluAluY
CAediting_325921chr3_179252829_-SINEAluAluY
CAediting_325922chr3_179252843_-SINEAluAluY
CAediting_325923chr3_179252856_-SINEAluAluY
CAediting_325924chr3_179252860_-SINEAluAluY
CAediting_325925chr3_179252864_-SINEAluAluY
CAediting_325926chr3_179252896_-SINEAluAluY
CAediting_325927chr3_179252900_-SINEAluAluY
CAediting_325928chr3_179252901_-SINEAluAluY
CAediting_325929chr3_179252902_-SINEAluAluY
CAediting_325930chr3_179252909_-SINEAluAluY
CAediting_325931chr3_179252910_-SINEAluAluY
CAediting_325932chr3_179252911_-SINEAluAluY
CAediting_325933chr3_179252914_-SINEAluAluY
CAediting_325934chr3_179252925_-SINEAluAluY
CAediting_325935chr3_179252931_-SINEAluAluY
CAediting_325936chr3_179252935_-SINEAluAluY
CAediting_325937chr3_179252956_-SINEAluAluY
CAediting_325938chr3_179252959_-SINEAluAluY
CAediting_325939chr3_179252964_-SINEAluAluY
CAediting_325940chr3_179252994_-SINEAluAluY
CAediting_325941chr3_179253002_-SINEAluAluY
CAediting_325942chr3_179253003_-SINEAluAluY
CAediting_325943chr3_179253019_-SINEAluAluY
CAediting_325944chr3_179253546_-SINEAluAluSx
CAediting_325945chr3_179253549_-SINEAluAluSx
CAediting_325946chr3_179253623_-SINEAluAluSx
CAediting_325947chr3_179253634_-SINEAluAluSx
CAediting_325948chr3_179253656_-SINEAluAluSx
CAediting_325949chr3_179253684_-SINEAluAluSx
CAediting_325950chr3_179253694_-SINEAluAluSx
CAediting_325951chr3_179253723_-SINEAluAluSx
CAediting_325952chr3_179254566_-SINEAluAluSc5
CAediting_325953chr3_179254568_-SINEAluAluSc5
CAediting_325954chr3_179254575_-SINEAluAluSc5
CAediting_325955chr3_179254592_-SINEAluAluSc5
CAediting_325956chr3_179254597_-SINEAluAluSc5
CAediting_325957chr3_179254605_-SINEAluAluSc5
CAediting_325958chr3_179254622_-SINEAluAluSc5
CAediting_325959chr3_179254626_-SINEAluAluSc5
CAediting_325960chr3_179254663_-SINEAluAluSc5
CAediting_325961chr3_179254664_-SINEAluAluSc5
CAediting_325962chr3_179254684_-SINEAluAluSc5
CAediting_325963chr3_179254690_-SINEAluAluSc5
CAediting_325964chr3_179254693_-SINEAluAluSc5
CAediting_325965chr3_179254694_-SINEAluAluSc5
CAediting_325966chr3_179254696_-SINEAluAluSc5
CAediting_325967chr3_179254719_-SINEAluAluSc5
CAediting_325968chr3_179254755_-SINEAluAluSc5
CAediting_325969chr3_179254793_-SINEAluAluSc5
CAediting_325970chr3_179254796_-SINEAluAluSc5
CAediting_325971chr3_179254798_-SINEAluAluSc5
CAediting_325972chr3_179254930_-SINEAluAluSx1
CAediting_325973chr3_179254962_-SINEAluAluSx1
CAediting_325974chr3_179254982_-SINEAluAluSx1
CAediting_325975chr3_179254999_-SINEAluAluSx1
CAediting_325976chr3_179255053_-SINEAluAluSx1
CAediting_325977chr3_179255056_-SINEAluAluSx1
CAediting_325978chr3_179255070_-SINEAluAluSx1
CAediting_325979chr3_179255082_-SINEAluAluSx1
CAediting_325980chr3_179255113_-SINEAluAluSx1
CAediting_325981chr3_179255132_-SINEAluAluSx1
CAediting_325982chr3_179255159_-SINEAluAluSx1
CAediting_325983chr3_179255163_-SINEAluAluSx1
CAediting_325984chr3_179256179_-SINEAluAluSx
CAediting_325985chr3_179256191_-SINEAluAluSx
CAediting_325986chr3_179256270_-SINEAluAluSx
CAediting_325987chr3_179256288_-SINEAluAluSx
CAediting_325988chr3_179256292_-SINEAluAluSx
CAediting_325989chr3_179256314_-SINEAluAluSx
CAediting_325990chr3_179256324_-SINEAluAluSx
CAediting_325991chr3_179256336_-SINEAluAluSx
CAediting_325992chr3_179256389_-SINEAluAluSx
CAediting_325993chr3_179256434_-SINEAluAluSx
CAediting_325994chr3_179256917_-SINEAluAluJo
CAediting_325995chr3_179256932_-SINEAluAluJo
CAediting_325996chr3_179256944_-SINEAluAluJo
CAediting_325997chr3_179256957_-SINEAluAluJo
CAediting_325998chr3_179256990_-SINEAluAluJo
CAediting_325999chr3_179256996_-SINEAluAluJo
CAediting_326000chr3_179257052_-SINEAluAluJo
CAediting_326001chr3_179257078_-SINEAluAluJo
CAediting_326002chr3_179257081_-SINEAluAluJo
CAediting_326003chr3_179257094_-SINEAluAluJo
CAediting_326004chr3_179257095_-SINEAluAluJo
CAediting_326005chr3_179257096_-SINEAluAluJo
CAediting_326006chr3_179257102_-SINEAluAluJo
CAediting_326007chr3_179257116_-SINEAluAluJo
CAediting_326008chr3_179257119_-SINEAluAluJo
CAediting_326009chr3_179257148_-SINEAluAluJo
CAediting_326010chr3_179257722_-SINEAluAluJr
CAediting_326011chr3_179257773_-SINEAluAluJr
CAediting_326012chr3_179257778_-SINEAluAluJr
CAediting_326013chr3_179257789_-SINEAluAluJr
CAediting_326014chr3_179257796_-SINEAluAluJr
CAediting_326015chr3_179257797_-SINEAluAluJr
CAediting_326016chr3_179257829_-SINEAluAluJr
CAediting_326017chr3_179257833_-SINEAluAluJr
CAediting_326018chr3_179257834_-SINEAluAluJr
CAediting_326019chr3_179257850_-SINEAluAluJr
CAediting_326020chr3_179257947_-SINEAluAluSq2
CAediting_326021chr3_179257950_-SINEAluAluSq2
CAediting_326022chr3_179257952_-SINEAluAluSq2
CAediting_326023chr3_179257953_-SINEAluAluSq2
CAediting_326024chr3_179257982_-SINEAluAluSq2
CAediting_326025chr3_179257996_-SINEAluAluSq2
CAediting_326026chr3_179258013_-SINEAluAluSq2
CAediting_326027chr3_179258017_-SINEAluAluSq2
CAediting_326028chr3_179258022_-SINEAluAluSq2
CAediting_326029chr3_179258045_-SINEAluAluSq2
CAediting_326030chr3_179258056_-SINEAluAluSq2
CAediting_326031chr3_179258059_-SINEAluAluSq2
CAediting_326032chr3_179258079_-SINEAluAluSq2
CAediting_326033chr3_179258104_-SINEAluAluSq2
CAediting_326034chr3_179258136_-SINEAluAluSq2

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RNA A-to-I editing events in the alternative splicing sites for KCNMB3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000171121.15.KCNMB3.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000171121.15.KCNMB3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for KCNMB3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
BRCA.CAediting_326017.ENSG00000171121.KCNMB3.png
Soverview

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Protein coding region RNA A-to-I editings for KCNMB3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for KCNMB3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000171121.15ENST00000485523hsa-miR-200b-3p1792368291792368346mer179236828179236850142-16.24
CAediting_688080chr9_63819626_+ENSG00000171121.15ENST00000485523hsa-miR-4477b1792386751792386828mer-1a179238675179238696155-12.92
CAediting_688081chr9_63819627_+ENSG00000171121.15ENST00000485523hsa-miR-4477b1792407811792407877mer-m8179240780179240801143-8.43
CAediting_1229414chr17_67471546_+ENSG00000171121.15ENST00000485523hsa-miR-548aa1792421931792421997mer-m8179242192179242216144-12.97
CAediting_1229415chr17_67471547_+ENSG00000171121.15ENST00000485523hsa-miR-548aa1792402741792402807mer-m8179240273179240297154-15.78
CAediting_1229415chr17_67471547_+ENSG00000171121.15ENST00000485523hsa-miR-548aa1792421101792421178mer-1a179242110179242138148-11.64
CAediting_1160181chr17_7017644_-ENSG00000171121.15ENST00000485523hsa-miR-195-3p1792400221792400287mer-1a179240022179240043145-12.48
CAediting_1351755chr19_40282625_-ENSG00000171121.15ENST00000485523hsa-miR-6411792413621792413687mer-1a179241362179241385142-18.97
CAediting_228905chr2_188297554_+ENSG00000171121.15ENST00000485523hsa-miR-561-3p1792390841792390907mer-m8179239083179239104147-8.9
CAediting_228905chr2_188297554_+ENSG00000171121.15ENST00000485523hsa-miR-561-3p1792388581792388647mer-m8179238857179238878153-8.73
CAediting_442554chr5_154685830_+ENSG00000171121.15ENST00000485523hsa-miR-13031792395111792395177mer-m8179239510179239532156-21.95
CAediting_604450chr7_133034877_-ENSG00000171121.15ENST00000485523hsa-miR-36541792378941792379007mer-m8179237893179237911140-18.86
CAediting_1160181chr17_7017644_-ENSG00000171121.15ENST00000392686hsa-miR-195-3p1792400221792400287mer-1a179240022179240043145-12.48
CAediting_468389chr6_31355314_-ENSG00000171121.15ENST00000485523hsa-miR-6891-5p1792386771792386848mer-1a179238677179238695140-21.29

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_117844chr1_162342605_+ENSG00000171121.15ENST00000485523hsa-miR-556-3p1792428021792428098mer-1a179242802179242824153-8.46
CAediting_228905chr2_188297554_+ENSG00000171121.15ENST00000485523hsa-miR-561-3p1792412021792412098mer-1a179241202179241224149-9.39
CAediting_980496chr14_31014685_-ENSG00000171121.15ENST00000485523hsa-miR-624-3p1792420241792420296mer179242023179242042140-11.79
CAediting_1351755chr19_40282625_-ENSG00000171121.15ENST00000485523hsa-miR-6411792379441792379507mer-m8179237943179237965148-10.93
CAediting_468389chr6_31355314_-ENSG00000171121.15ENST00000485523hsa-miR-6891-5p1792393421792393487mer-m8179239341179239359151-17.54

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for KCNMB3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for KCNMB3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for KCNMB3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for KCNMB3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for KCNMB3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
KCNMB3Q9NPA1DB09089TrimebutineCalcium-activated potassium channel subunit beta-3 SmallMoleculeDrugapproved
KCNMB3Q9NPA1DB00721ProcaineCalcium-activated potassium channel subunit beta-3 SmallMoleculeDrugapproved|investigational|vet_approved
KCNMB3Q9NPA1DB01110MiconazoleCalcium-activated potassium channel subunit beta-3 SmallMoleculeDrugapproved|investigational|vet_approved

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RelatedDiseases for KCNMB3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource