CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: STAU2 (CAeditome ID:27067)

Gene summary for STAU2

check button Gene summary
Gene informationGene symbol

STAU2

Gene ID

27067

Gene namestaufen double-stranded RNA binding protein 2
Synonyms39K2|39K3
Cytomap

8q21.11

Type of geneprotein-coding
Descriptiondouble-stranded RNA-binding protein Staufen homolog 2staufen homolog 2staufen, RNA binding protein, homolog 2
Modification date20210518
UniProtAcc

Q9NUL3

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
STAU2

GO:0003725

Double-stranded RNA-binding protein Staufen homolog 2

21266579


Top

RNA A-to-I events for STAU2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000040341.16

check button RNA A-to-I editing events in Cancer.
CAediting_645809(73443812, -), CAediting_645810(73462329, -), CAediting_645811(73465908, -), CAediting_645812(73465954, -), CAediting_645813(73470682, -), CAediting_645814(73470692, -), CAediting_645815(73470704, -), CAediting_645816(73470752, -), CAediting_645817(73470768, -), CAediting_645818(73470804, -), CAediting_645819(73471249, -), CAediting_645820(73471324, -), CAediting_645821(73471333, -), CAediting_645822(73485262, -), CAediting_645823(73485263, -), CAediting_645824(73485832, -), CAediting_645825(73500260, -), CAediting_645826(73500263, -), CAediting_645827(73500267, -), CAediting_645828(73500272, -), CAediting_645829(73509244, -), CAediting_645830(73509331, -), CAediting_645831(73515964, -), CAediting_645832(73516031, -), CAediting_645833(73516055, -), CAediting_645834(73516058, -), CAediting_645835(73516066, -), CAediting_645836(73516072, -), CAediting_645837(73516074, -), CAediting_645838(73516098, -), CAediting_645839(73516135, -), CAediting_645840(73516212, -), CAediting_645841(73516213, -), CAediting_645842(73517160, -), CAediting_645843(73517172, -), CAediting_645844(73517182, -), CAediting_645845(73517229, -), CAediting_645846(73517315, -), CAediting_645847(73517316, -), CAediting_645848(73517325, -), CAediting_645849(73517342, -), CAediting_645850(73517348, -), CAediting_645851(73517355, -), CAediting_645852(73517362, -), CAediting_645853(73517363, -), CAediting_645854(73517373, -), CAediting_645855(73517378, -), CAediting_645856(73517411, -), CAediting_645857(73532440, -), CAediting_645858(73544846, -), CAediting_645859(73544879, -), CAediting_645860(73544886, -), CAediting_645861(73544893, -), CAediting_645862(73545758, -), CAediting_645863(73545812, -), CAediting_645864(73545919, -), CAediting_645865(73546024, -), CAediting_645866(73546053, -), CAediting_645867(73546078, -), CAediting_645868(73546101, -), CAediting_645869(73546413, -), CAediting_645870(73546429, -), CAediting_645871(73546513, -), CAediting_645872(73583294, -), CAediting_645873(73592688, -), CAediting_645874(73605473, -), CAediting_645875(73605604, -), CAediting_645876(73610357, -), CAediting_645877(73611875, -), CAediting_645878(73629905, -), CAediting_645879(73638872, -), CAediting_645880(73644393, -), CAediting_645881(73647641, -), CAediting_645882(73654395, -), CAediting_645883(73654502, -), CAediting_645884(73654503, -), CAediting_645885(73654545, -), CAediting_645886(73654825, -), CAediting_645887(73654851, -), CAediting_645888(73654869, -), CAediting_645889(73654957, -), CAediting_645890(73655787, -), CAediting_645891(73655978, -), CAediting_645892(73655979, -), CAediting_645893(73656055, -), CAediting_645894(73656056, -), CAediting_645895(73661580, -), CAediting_645896(73664173, -), CAediting_645897(73664212, -), CAediting_645898(73664288, -), CAediting_645899(73664734, -), CAediting_645900(73664747, -), CAediting_645901(73664819, -), CAediting_645902(73664825, -), CAediting_645903(73664870, -), CAediting_645904(73664891, -), CAediting_645905(73664892, -), CAediting_645906(73664935, -), CAediting_645907(73664956, -), CAediting_645908(73665573, -), CAediting_645909(73734611, -), CAediting_645910(73734628, -), CAediting_645911(73734682, -), CAediting_645912(73734711, -), CAediting_645913(73734967, -), CAediting_645914(73734995, -), CAediting_645915(73735072, -), CAediting_645916(73735130, -), CAediting_645917(73735204, -), CAediting_645918(73736961, -), CAediting_645919(73736993, -), CAediting_645920(73737049, -), CAediting_645921(73737060, -), CAediting_645922(73737061, -), CAediting_645923(73737121, -), CAediting_645924(73740742, -), CAediting_645925(73740743, -), CAediting_645926(73740745, -), CAediting_645927(73740749, -), CAediting_645928(73740784, -), CAediting_645929(73740809, -), CAediting_645930(73740821, -), CAediting_645931(73740829, -), CAediting_645932(73740835, -), CAediting_645933(73740838, -), CAediting_645934(73740852, -), CAediting_645935(73740857, -), CAediting_645936(73740873, -), CAediting_645937(73740889, -), CAediting_645938(73741529, -), CAediting_645939(73741542, -), CAediting_645940(73741548, -), CAediting_645941(73741565, -), CAediting_645942(73741580, -), CAediting_645943(73741585, -), CAediting_645944(73741610, -), CAediting_645945(73741615, -), CAediting_645946(73741618, -), CAediting_645947(73741624, -), CAediting_645948(73741634, -), CAediting_645949(73741641, -), CAediting_645950(73741645, -), CAediting_645951(73741651, -), CAediting_645952(73741669, -), CAediting_645953(73741677, -), CAediting_645954(73741686, -), CAediting_645955(73741688, -), CAediting_645956(73741690, -), CAediting_645957(73741691, -), CAediting_645958(73741693, -), CAediting_645959(73741706, -), CAediting_645960(73741716, -), CAediting_645961(73741717, -), CAediting_645962(73741729, -), CAediting_645963(73741759, -), CAediting_645964(73741785, -), CAediting_645965(73741786, -), CAediting_645966(73741794, -), CAediting_645967(73742276, -), CAediting_645968(73742288, -), CAediting_645969(73742290, -), CAediting_645970(73742316, -), CAediting_645971(73742336, -), CAediting_645972(73742382, -), CAediting_645973(73742383, -), CAediting_645974(73742407, -), CAediting_645975(73742409, -), CAediting_645976(73742418, -), CAediting_645977(73742430, -), CAediting_645978(73742447, -), CAediting_645979(73742448, -), CAediting_645980(73742473, -), CAediting_645981(73742499, -), CAediting_645982(73742516, -), CAediting_645983(73742528, -), CAediting_645984(73743507, -), CAediting_645985(73743511, -), CAediting_645986(73743566, -), CAediting_645987(73743569, -), CAediting_645988(73743570, -), CAediting_645989(73743571, -), CAediting_645990(73743576, -), CAediting_645991(73743579, -), CAediting_645992(73743582, -), CAediting_645993(73743585, -), CAediting_645994(73743602, -), CAediting_645995(73743606, -), CAediting_645996(73743611, -), CAediting_645997(73743612, -), CAediting_645998(73743620, -), CAediting_645999(73743638, -), CAediting_646000(73743641, -), CAediting_646001(73743643, -), CAediting_646002(73743648, -), CAediting_646003(73743655, -), CAediting_646004(73743674, -), CAediting_646005(73743686, -), CAediting_646006(73743706, -), CAediting_646007(73743746, -), CAediting_646008(73743747, -), CAediting_646009(73744016, -), CAediting_646010(73744037, -), CAediting_646011(73744042, -), CAediting_646012(73744043, -), CAediting_646013(73744065, -),

Top

RNA editing positional annotations for STAU2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_645809chr8_73443812_-ncRNA_intronic
CAediting_645810chr8_73462329_-intronic
CAediting_645811chr8_73465908_-intronic
CAediting_645812chr8_73465954_-intronic
CAediting_645813chr8_73470682_-intronic
CAediting_645814chr8_73470692_-intronic
CAediting_645815chr8_73470704_-intronic
CAediting_645816chr8_73470752_-intronic
CAediting_645817chr8_73470768_-intronic
CAediting_645818chr8_73470804_-intronic
CAediting_645819chr8_73471249_-intronic
CAediting_645820chr8_73471324_-intronic
CAediting_645821chr8_73471333_-intronic
CAediting_645822chr8_73485262_-intronic
CAediting_645823chr8_73485263_-intronic
CAediting_645824chr8_73485832_-intronic
CAediting_645825chr8_73500260_-intronic
CAediting_645826chr8_73500263_-intronic
CAediting_645827chr8_73500267_-intronic
CAediting_645828chr8_73500272_-intronic
CAediting_645829chr8_73509244_-intronic
CAediting_645830chr8_73509331_-intronic
CAediting_645831chr8_73515964_-intronic
CAediting_645832chr8_73516031_-intronic
CAediting_645833chr8_73516055_-intronic
CAediting_645834chr8_73516058_-intronic
CAediting_645835chr8_73516066_-intronic
CAediting_645836chr8_73516072_-intronic
CAediting_645837chr8_73516074_-intronic
CAediting_645838chr8_73516098_-intronic
CAediting_645839chr8_73516135_-intronic
CAediting_645840chr8_73516212_-intronic
CAediting_645841chr8_73516213_-intronic
CAediting_645842chr8_73517160_-intronic
CAediting_645843chr8_73517172_-intronic
CAediting_645844chr8_73517182_-intronic
CAediting_645845chr8_73517229_-intronic
CAediting_645846chr8_73517315_-intronic
CAediting_645847chr8_73517316_-intronic
CAediting_645848chr8_73517325_-intronic
CAediting_645849chr8_73517342_-intronic
CAediting_645850chr8_73517348_-intronic
CAediting_645851chr8_73517355_-intronic
CAediting_645852chr8_73517362_-intronic
CAediting_645853chr8_73517363_-intronic
CAediting_645854chr8_73517373_-intronic
CAediting_645855chr8_73517378_-intronic
CAediting_645856chr8_73517411_-intronic
CAediting_645857chr8_73532440_-intronic
CAediting_645858chr8_73544846_-intronic
CAediting_645859chr8_73544879_-intronic
CAediting_645860chr8_73544886_-intronic
CAediting_645861chr8_73544893_-intronic
CAediting_645862chr8_73545758_-intronic
CAediting_645863chr8_73545812_-intronic
CAediting_645864chr8_73545919_-intronic
CAediting_645865chr8_73546024_-intronic
CAediting_645866chr8_73546053_-intronic
CAediting_645867chr8_73546078_-intronic
CAediting_645868chr8_73546101_-intronic
CAediting_645869chr8_73546413_-intronic
CAediting_645870chr8_73546429_-intronic
CAediting_645871chr8_73546513_-intronic
CAediting_645872chr8_73583294_-intronic
CAediting_645873chr8_73592688_-intronic
CAediting_645874chr8_73605473_-intronic
CAediting_645875chr8_73605604_-intronic
CAediting_645876chr8_73610357_-intronic
CAediting_645877chr8_73611875_-intronic
CAediting_645878chr8_73629905_-ncRNA_intronic
CAediting_645879chr8_73638872_-ncRNA_intronic
CAediting_645880chr8_73644393_-ncRNA_intronic
CAediting_645881chr8_73647641_-ncRNA_intronic
CAediting_645882chr8_73654395_-ncRNA_intronic
CAediting_645883chr8_73654502_-ncRNA_intronic
CAediting_645884chr8_73654503_-ncRNA_intronic
CAediting_645885chr8_73654545_-ncRNA_intronic
CAediting_645886chr8_73654825_-ncRNA_intronic
CAediting_645887chr8_73654851_-ncRNA_intronic
CAediting_645888chr8_73654869_-ncRNA_intronic
CAediting_645889chr8_73654957_-ncRNA_intronic
CAediting_645890chr8_73655787_-ncRNA_intronic
CAediting_645891chr8_73655978_-ncRNA_intronic
CAediting_645892chr8_73655979_-ncRNA_intronic
CAediting_645893chr8_73656055_-ncRNA_intronic
CAediting_645894chr8_73656056_-ncRNA_intronic
CAediting_645895chr8_73661580_-ncRNA_intronic
CAediting_645896chr8_73664173_-ncRNA_intronic
CAediting_645897chr8_73664212_-ncRNA_intronic
CAediting_645898chr8_73664288_-ncRNA_intronic
CAediting_645899chr8_73664734_-ncRNA_intronic
CAediting_645900chr8_73664747_-ncRNA_intronic
CAediting_645901chr8_73664819_-ncRNA_intronic
CAediting_645902chr8_73664825_-ncRNA_intronic
CAediting_645903chr8_73664870_-ncRNA_intronic
CAediting_645904chr8_73664891_-ncRNA_intronic
CAediting_645905chr8_73664892_-ncRNA_intronic
CAediting_645906chr8_73664935_-ncRNA_intronic
CAediting_645907chr8_73664956_-ncRNA_intronic
CAediting_645908chr8_73665573_-ncRNA_intronic
CAediting_645909chr8_73734611_-ncRNA_intronic
CAediting_645910chr8_73734628_-ncRNA_intronic
CAediting_645911chr8_73734682_-ncRNA_intronic
CAediting_645912chr8_73734711_-ncRNA_intronic
CAediting_645913chr8_73734967_-ncRNA_intronic
CAediting_645914chr8_73734995_-ncRNA_intronic
CAediting_645915chr8_73735072_-ncRNA_intronic
CAediting_645916chr8_73735130_-ncRNA_intronic
CAediting_645917chr8_73735204_-ncRNA_intronic
CAediting_645918chr8_73736961_-ncRNA_intronic
CAediting_645919chr8_73736993_-ncRNA_intronic
CAediting_645920chr8_73737049_-ncRNA_intronic
CAediting_645921chr8_73737060_-ncRNA_intronic
CAediting_645922chr8_73737061_-ncRNA_intronic
CAediting_645923chr8_73737121_-ncRNA_intronic
CAediting_645924chr8_73740742_-ncRNA_intronic
CAediting_645925chr8_73740743_-ncRNA_intronic
CAediting_645926chr8_73740745_-ncRNA_intronic
CAediting_645927chr8_73740749_-ncRNA_intronic
CAediting_645928chr8_73740784_-ncRNA_intronic
CAediting_645929chr8_73740809_-ncRNA_intronic
CAediting_645930chr8_73740821_-ncRNA_intronic
CAediting_645931chr8_73740829_-ncRNA_intronic
CAediting_645932chr8_73740835_-ncRNA_intronic
CAediting_645933chr8_73740838_-ncRNA_intronic
CAediting_645934chr8_73740852_-ncRNA_intronic
CAediting_645935chr8_73740857_-ncRNA_intronic
CAediting_645936chr8_73740873_-ncRNA_intronic
CAediting_645937chr8_73740889_-ncRNA_intronic
CAediting_645938chr8_73741529_-ncRNA_intronic
CAediting_645939chr8_73741542_-ncRNA_intronic
CAediting_645940chr8_73741548_-ncRNA_intronic
CAediting_645941chr8_73741565_-ncRNA_intronic
CAediting_645942chr8_73741580_-ncRNA_intronic
CAediting_645943chr8_73741585_-ncRNA_intronic
CAediting_645944chr8_73741610_-ncRNA_intronic
CAediting_645945chr8_73741615_-ncRNA_intronic
CAediting_645946chr8_73741618_-ncRNA_intronic
CAediting_645947chr8_73741624_-ncRNA_intronic
CAediting_645948chr8_73741634_-ncRNA_intronic
CAediting_645949chr8_73741641_-ncRNA_intronic
CAediting_645950chr8_73741645_-ncRNA_intronic
CAediting_645951chr8_73741651_-ncRNA_intronic
CAediting_645952chr8_73741669_-ncRNA_intronic
CAediting_645953chr8_73741677_-ncRNA_intronic
CAediting_645954chr8_73741686_-ncRNA_intronic
CAediting_645955chr8_73741688_-ncRNA_intronic
CAediting_645956chr8_73741690_-ncRNA_intronic
CAediting_645957chr8_73741691_-ncRNA_intronic
CAediting_645958chr8_73741693_-ncRNA_intronic
CAediting_645959chr8_73741706_-ncRNA_intronic
CAediting_645960chr8_73741716_-ncRNA_intronic
CAediting_645961chr8_73741717_-ncRNA_intronic
CAediting_645962chr8_73741729_-ncRNA_intronic
CAediting_645963chr8_73741759_-ncRNA_intronic
CAediting_645964chr8_73741785_-ncRNA_intronic
CAediting_645965chr8_73741786_-ncRNA_intronic
CAediting_645966chr8_73741794_-ncRNA_intronic
CAediting_645967chr8_73742276_-ncRNA_exonic
CAediting_645968chr8_73742288_-ncRNA_exonic
CAediting_645969chr8_73742290_-ncRNA_exonic
CAediting_645970chr8_73742316_-ncRNA_exonic
CAediting_645971chr8_73742336_-ncRNA_exonic
CAediting_645972chr8_73742382_-ncRNA_intronic
CAediting_645973chr8_73742383_-ncRNA_intronic
CAediting_645974chr8_73742407_-ncRNA_intronic
CAediting_645975chr8_73742409_-ncRNA_intronic
CAediting_645976chr8_73742418_-ncRNA_intronic
CAediting_645977chr8_73742430_-ncRNA_intronic
CAediting_645978chr8_73742447_-ncRNA_intronic
CAediting_645979chr8_73742448_-ncRNA_intronic
CAediting_645980chr8_73742473_-ncRNA_intronic
CAediting_645981chr8_73742499_-ncRNA_intronic
CAediting_645982chr8_73742516_-ncRNA_intronic
CAediting_645983chr8_73742528_-ncRNA_intronic
CAediting_645984chr8_73743507_-ncRNA_intronic
CAediting_645985chr8_73743511_-ncRNA_intronic
CAediting_645986chr8_73743566_-ncRNA_intronic
CAediting_645987chr8_73743569_-ncRNA_intronic
CAediting_645988chr8_73743570_-ncRNA_intronic
CAediting_645989chr8_73743571_-ncRNA_intronic
CAediting_645990chr8_73743576_-ncRNA_intronic
CAediting_645991chr8_73743579_-ncRNA_intronic
CAediting_645992chr8_73743582_-ncRNA_intronic
CAediting_645993chr8_73743585_-ncRNA_intronic
CAediting_645994chr8_73743602_-ncRNA_intronic
CAediting_645995chr8_73743606_-ncRNA_intronic
CAediting_645996chr8_73743611_-ncRNA_intronic
CAediting_645997chr8_73743612_-ncRNA_intronic
CAediting_645998chr8_73743620_-ncRNA_intronic
CAediting_645999chr8_73743638_-ncRNA_intronic
CAediting_646000chr8_73743641_-ncRNA_intronic
CAediting_646001chr8_73743643_-ncRNA_intronic
CAediting_646002chr8_73743648_-ncRNA_intronic
CAediting_646003chr8_73743655_-ncRNA_intronic
CAediting_646004chr8_73743674_-ncRNA_intronic
CAediting_646005chr8_73743686_-ncRNA_intronic
CAediting_646006chr8_73743706_-ncRNA_intronic
CAediting_646007chr8_73743746_-ncRNA_intronic
CAediting_646008chr8_73743747_-ncRNA_intronic
CAediting_646009chr8_73744016_-ncRNA_intronic
CAediting_646010chr8_73744037_-ncRNA_intronic
CAediting_646011chr8_73744042_-ncRNA_intronic
CAediting_646012chr8_73744043_-ncRNA_intronic
CAediting_646013chr8_73744065_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_645809chr8_73443812_-SINEAluAluJr
CAediting_645810chr8_73462329_-SINEAluAluSq2
CAediting_645811chr8_73465908_-SINEAluAluSx
CAediting_645812chr8_73465954_-SINEAluAluSx
CAediting_645813chr8_73470682_-SINEAluAluJr
CAediting_645814chr8_73470692_-SINEAluAluJr
CAediting_645815chr8_73470704_-SINEAluAluJr
CAediting_645816chr8_73470752_-SINEAluAluJr
CAediting_645817chr8_73470768_-SINEAluAluJr
CAediting_645818chr8_73470804_-SINEAluAluJr
CAediting_645819chr8_73471249_-SINEAluAluJb
CAediting_645820chr8_73471324_-SINEAluAluJb
CAediting_645821chr8_73471333_-SINEAluAluJb
CAediting_645822chr8_73485262_-SINEAluAluJr
CAediting_645823chr8_73485263_-SINEAluAluJr
CAediting_645824chr8_73485832_-SINEAluAluJr
CAediting_645825chr8_73500260_-DNATcMar-TiggerMER2B
CAediting_645826chr8_73500263_-DNATcMar-TiggerMER2B
CAediting_645827chr8_73500267_-DNATcMar-TiggerMER2B
CAediting_645828chr8_73500272_-DNATcMar-TiggerMER2B
CAediting_645829chr8_73509244_-LINEL1L1MB7
CAediting_645830chr8_73509331_-LINEL1L1MB7
CAediting_645831chr8_73515964_-SINEAluAluJo
CAediting_645832chr8_73516031_-SINEAluAluJo
CAediting_645833chr8_73516055_-SINEAluAluJo
CAediting_645834chr8_73516058_-SINEAluAluJo
CAediting_645835chr8_73516066_-SINEAluAluJo
CAediting_645836chr8_73516072_-SINEAluAluJo
CAediting_645837chr8_73516074_-SINEAluAluJo
CAediting_645838chr8_73516098_-SINEAluAluJo
CAediting_645839chr8_73516135_-SINEAluAluJo
CAediting_645840chr8_73516212_-SINEAluAluJo
CAediting_645841chr8_73516213_-SINEAluAluJo
CAediting_645842chr8_73517160_-SINEAluAluJo
CAediting_645843chr8_73517172_-SINEAluAluJo
CAediting_645844chr8_73517182_-SINEAluAluJo
CAediting_645845chr8_73517229_-SINEAluAluJo
CAediting_645846chr8_73517315_-SINEAluAluJo
CAediting_645847chr8_73517316_-SINEAluAluJo
CAediting_645848chr8_73517325_-SINEAluAluJo
CAediting_645849chr8_73517342_-SINEAluAluJo
CAediting_645850chr8_73517348_-SINEAluAluJo
CAediting_645851chr8_73517355_-SINEAluAluJo
CAediting_645852chr8_73517362_-SINEAluAluJo
CAediting_645853chr8_73517363_-SINEAluAluJo
CAediting_645854chr8_73517373_-SINEAluAluJo
CAediting_645855chr8_73517378_-SINEAluAluJo
CAediting_645856chr8_73517411_-SINEAluAluJo
CAediting_645857chr8_73532440_-SINEAluAluJo
CAediting_645862chr8_73545758_-SINEAluAluY
CAediting_645863chr8_73545812_-SINEAluAluY
CAediting_645864chr8_73545919_-SINEAluAluY
CAediting_645865chr8_73546024_-SINEAluAluSx1
CAediting_645866chr8_73546053_-SINEAluAluSx1
CAediting_645867chr8_73546078_-SINEAluAluSx1
CAediting_645868chr8_73546101_-SINEAluAluSx1
CAediting_645872chr8_73583294_-SINEAluAluSx1
CAediting_645873chr8_73592688_-SINEAluAluSz
CAediting_645874chr8_73605473_-SINEAluAluSz
CAediting_645875chr8_73605604_-SINEAluAluSz
CAediting_645876chr8_73610357_-SINEAluAluSz
CAediting_645877chr8_73611875_-SINEAluAluSz6
CAediting_645878chr8_73629905_-SINEAluAluJb
CAediting_645880chr8_73644393_-SINEAluAluJo
CAediting_645881chr8_73647641_-SINEAluAluJr
CAediting_645882chr8_73654395_-SINEAluAluJb
CAediting_645883chr8_73654502_-SINEAluAluJb
CAediting_645884chr8_73654503_-SINEAluAluJb
CAediting_645885chr8_73654545_-SINEAluAluJb
CAediting_645886chr8_73654825_-SINEAluAluYg6
CAediting_645887chr8_73654851_-SINEAluAluYg6
CAediting_645888chr8_73654869_-SINEAluAluYg6
CAediting_645889chr8_73654957_-SINEAluAluYg6
CAediting_645890chr8_73655787_-SINEAluAluY
CAediting_645891chr8_73655978_-SINEAluAluY
CAediting_645892chr8_73655979_-SINEAluAluY
CAediting_645893chr8_73656055_-SINEAluAluY
CAediting_645894chr8_73656056_-SINEAluAluY
CAediting_645895chr8_73661580_-LINEL1L1ME1
CAediting_645896chr8_73664173_-SINEAluAluJb
CAediting_645897chr8_73664212_-SINEAluAluJb
CAediting_645898chr8_73664288_-SINEAluAluJb
CAediting_645899chr8_73664734_-SINEAluAluSz
CAediting_645900chr8_73664747_-SINEAluAluSz
CAediting_645901chr8_73664819_-SINEAluAluSz
CAediting_645902chr8_73664825_-SINEAluAluSz
CAediting_645903chr8_73664870_-SINEAluAluSz
CAediting_645904chr8_73664891_-SINEAluAluSz
CAediting_645905chr8_73664892_-SINEAluAluSz
CAediting_645906chr8_73664935_-SINEAluAluSz
CAediting_645907chr8_73664956_-SINEAluAluSz
CAediting_645908chr8_73665573_-DNATcMar-MarinerMADE2
CAediting_645909chr8_73734611_-SINEAluAluSg
CAediting_645910chr8_73734628_-SINEAluAluSg
CAediting_645911chr8_73734682_-SINEAluAluSg
CAediting_645912chr8_73734711_-SINEAluAluSg
CAediting_645913chr8_73734967_-SINEAluAluJb
CAediting_645914chr8_73734995_-SINEAluAluJb
CAediting_645915chr8_73735072_-SINEAluAluJb
CAediting_645916chr8_73735130_-SINEAluAluJb
CAediting_645917chr8_73735204_-SINEAluAluJb
CAediting_645918chr8_73736961_-SINEAluAluSx
CAediting_645919chr8_73736993_-SINEAluAluSx
CAediting_645920chr8_73737049_-SINEAluAluSx
CAediting_645921chr8_73737060_-SINEAluAluSx
CAediting_645922chr8_73737061_-SINEAluAluSx
CAediting_645923chr8_73737121_-SINEAluAluSx
CAediting_645924chr8_73740742_-SINEAluAluSx
CAediting_645925chr8_73740743_-SINEAluAluSx
CAediting_645926chr8_73740745_-SINEAluAluSx
CAediting_645927chr8_73740749_-SINEAluAluSx
CAediting_645928chr8_73740784_-SINEAluAluSx
CAediting_645929chr8_73740809_-SINEAluAluSx
CAediting_645930chr8_73740821_-SINEAluAluSx
CAediting_645931chr8_73740829_-SINEAluAluSx
CAediting_645932chr8_73740835_-SINEAluAluSx
CAediting_645933chr8_73740838_-SINEAluAluSx
CAediting_645934chr8_73740852_-SINEAluAluSx
CAediting_645935chr8_73740857_-SINEAluAluSx
CAediting_645936chr8_73740873_-SINEAluAluSx
CAediting_645937chr8_73740889_-SINEAluAluSx
CAediting_645938chr8_73741529_-SINEAluAluSx
CAediting_645939chr8_73741542_-SINEAluAluSx
CAediting_645940chr8_73741548_-SINEAluAluSx
CAediting_645941chr8_73741565_-SINEAluAluSx
CAediting_645942chr8_73741580_-SINEAluAluSx
CAediting_645943chr8_73741585_-SINEAluAluSx
CAediting_645944chr8_73741610_-SINEAluAluSx
CAediting_645945chr8_73741615_-SINEAluAluSx
CAediting_645946chr8_73741618_-SINEAluAluSx
CAediting_645947chr8_73741624_-SINEAluAluSx
CAediting_645948chr8_73741634_-SINEAluAluSx
CAediting_645949chr8_73741641_-SINEAluAluSx
CAediting_645950chr8_73741645_-SINEAluAluSx
CAediting_645951chr8_73741651_-SINEAluAluSx
CAediting_645952chr8_73741669_-SINEAluAluSx
CAediting_645953chr8_73741677_-SINEAluAluSx
CAediting_645954chr8_73741686_-SINEAluAluSx
CAediting_645955chr8_73741688_-SINEAluAluSx
CAediting_645956chr8_73741690_-SINEAluAluSx
CAediting_645957chr8_73741691_-SINEAluAluSx
CAediting_645958chr8_73741693_-SINEAluAluSx
CAediting_645959chr8_73741706_-SINEAluAluSx
CAediting_645960chr8_73741716_-SINEAluAluSx
CAediting_645961chr8_73741717_-SINEAluAluSx
CAediting_645962chr8_73741729_-SINEAluAluSx
CAediting_645963chr8_73741759_-SINEAluAluSx
CAediting_645964chr8_73741785_-SINEAluAluSx
CAediting_645965chr8_73741786_-SINEAluAluSx
CAediting_645966chr8_73741794_-SINEAluAluSx
CAediting_645967chr8_73742276_-SINEAluAluSx
CAediting_645968chr8_73742288_-SINEAluAluSx
CAediting_645969chr8_73742290_-SINEAluAluSx
CAediting_645970chr8_73742316_-SINEAluAluSx
CAediting_645971chr8_73742336_-SINEAluAluSx
CAediting_645972chr8_73742382_-SINEAluAluSx
CAediting_645973chr8_73742383_-SINEAluAluSx
CAediting_645974chr8_73742407_-SINEAluAluSx
CAediting_645975chr8_73742409_-SINEAluAluSx
CAediting_645976chr8_73742418_-SINEAluAluSx
CAediting_645977chr8_73742430_-SINEAluAluSx
CAediting_645978chr8_73742447_-SINEAluAluSx
CAediting_645979chr8_73742448_-SINEAluAluSx
CAediting_645980chr8_73742473_-SINEAluAluSx
CAediting_645981chr8_73742499_-SINEAluAluSx
CAediting_645982chr8_73742516_-SINEAluAluSx
CAediting_645983chr8_73742528_-SINEAluAluSx
CAediting_645984chr8_73743507_-SINEAluAluSp
CAediting_645985chr8_73743511_-SINEAluAluSp
CAediting_645986chr8_73743566_-SINEAluAluSp
CAediting_645987chr8_73743569_-SINEAluAluSp
CAediting_645988chr8_73743570_-SINEAluAluSp
CAediting_645989chr8_73743571_-SINEAluAluSp
CAediting_645990chr8_73743576_-SINEAluAluSp
CAediting_645991chr8_73743579_-SINEAluAluSp
CAediting_645992chr8_73743582_-SINEAluAluSp
CAediting_645993chr8_73743585_-SINEAluAluSp
CAediting_645994chr8_73743602_-SINEAluAluSp
CAediting_645995chr8_73743606_-SINEAluAluSp
CAediting_645996chr8_73743611_-SINEAluAluSp
CAediting_645997chr8_73743612_-SINEAluAluSp
CAediting_645998chr8_73743620_-SINEAluAluSp
CAediting_645999chr8_73743638_-SINEAluAluSp
CAediting_646000chr8_73743641_-SINEAluAluSp
CAediting_646001chr8_73743643_-SINEAluAluSp
CAediting_646002chr8_73743648_-SINEAluAluSp
CAediting_646003chr8_73743655_-SINEAluAluSp
CAediting_646004chr8_73743674_-SINEAluAluSp
CAediting_646005chr8_73743686_-SINEAluAluSp
CAediting_646006chr8_73743706_-SINEAluAluSp
CAediting_646007chr8_73743746_-SINEAluAluSp
CAediting_646008chr8_73743747_-SINEAluAluSp
CAediting_646009chr8_73744016_-SINEAluAluSg
CAediting_646010chr8_73744037_-SINEAluAluSg
CAediting_646011chr8_73744042_-SINEAluAluSg
CAediting_646012chr8_73744043_-SINEAluAluSg
CAediting_646013chr8_73744065_-SINEAluAluSg

Top

RNA A-to-I editing events in the alternative splicing sites for STAU2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_645972chr8_73742382_-73742361:737423833SS0+19iAATTTTTGTATTTTTAGTAGAGA2.24AGTTTTTGTATTTTTAGTAGAGA1.76
ESCAediting_645973chr8_73742383_-73742361:737423833SS0+20iAATTTTTGTATTTTTAGTAGAGA2.24GATTTTTGTATTTTTAGTAGAGA2.45

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000040341.16.STAU2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000040341.16.STAU2.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for STAU2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for STAU2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for STAU2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000040341.16ENST00000522695hsa-miR-548aa73420879734208857mer-m87342087873420901148-13.22
CAediting_1368054chr19_46709310_-ENSG00000040341.16ENST00000523533hsa-miR-320e73527648735276547mer-m87352764773527664151-17.28
CAediting_1229414chr17_67471546_+ENSG00000040341.16ENST00000355780hsa-miR-548aa73551727735517337mer-m87355172673551749146-8.42
CAediting_1229415chr17_67471547_+ENSG00000040341.16ENST00000355780hsa-miR-548aa73549700735497067mer-m87354969973549723156-13.97
CAediting_228905chr2_188297554_+ENSG00000040341.16ENST00000355780hsa-miR-561-3p73551180735511878mer-1a7355118073551201165-11.4
CAediting_1229414chr17_67471546_+ENSG00000040341.16ENST00000519961hsa-miR-548aa73551727735517337mer-m87355172673551749146-8.42
CAediting_1229415chr17_67471547_+ENSG00000040341.16ENST00000519961hsa-miR-548aa73549700735497067mer-m87354969973549723156-13.97
CAediting_228905chr2_188297554_+ENSG00000040341.16ENST00000519961hsa-miR-561-3p73551180735511878mer-1a7355118073551201165-11.4
CAediting_1229414chr17_67471546_+ENSG00000040341.16ENST00000521727hsa-miR-548aa73551727735517337mer-m87355172673551749146-8.42
CAediting_228905chr2_188297554_+ENSG00000040341.16ENST00000521727hsa-miR-561-3p73551180735511878mer-1a7355118073551201165-11.4
CAediting_1229414chr17_67471546_+ENSG00000040341.16ENST00000521451hsa-miR-548aa73551727735517337mer-m87355172673551749146-8.42
CAediting_228905chr2_188297554_+ENSG00000040341.16ENST00000521451hsa-miR-561-3p73551180735511878mer-1a7355118073551201165-11.4
CAediting_1229414chr17_67471546_+ENSG00000040341.16ENST00000522509hsa-miR-548aa73551727735517337mer-m87355172673551749146-8.42
CAediting_1229414chr17_67471546_+ENSG00000040341.16ENST00000524104hsa-miR-548aa73652505736525117mer-m87365250473652528140-10.86
CAediting_524911chr7_5495852_-ENSG00000040341.16ENST00000524104hsa-miR-589-3p73652706736527127mer-m87365270573652728158-21.97
CAediting_1524209chrX_134546392_-ENSG00000040341.16ENST00000355780hsa-miR-503-5p73551798735518036mer7355179773551819141-16.88
CAediting_1524209chrX_134546392_-ENSG00000040341.16ENST00000519961hsa-miR-503-5p73551798735518036mer7355179773551819141-16.88
CAediting_1524209chrX_134546392_-ENSG00000040341.16ENST00000521727hsa-miR-503-5p73551798735518036mer7355179773551819141-16.88
CAediting_1524209chrX_134546392_-ENSG00000040341.16ENST00000521451hsa-miR-503-5p73551798735518036mer7355179773551819141-16.88
CAediting_1524209chrX_134546392_-ENSG00000040341.16ENST00000522509hsa-miR-503-5p73551798735518036mer7355179773551819141-16.88

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000040341.16ENST00000522695hsa-miR-548aa73420681734206866mer7342068173420705150-15.41
CAediting_1229414chr17_67471546_+ENSG00000040341.16ENST00000522695hsa-miR-548aa73420681734206866mer7342068173420705150-15.41
CAediting_1160181chr17_7017644_-ENSG00000040341.16ENST00000355780hsa-miR-195-3p73549721735497277mer-m87354972073549741151-6.3
CAediting_396018chr5_1062918_-ENSG00000040341.16ENST00000355780hsa-miR-463573550769735507768mer-1a7355076973550790148-13.31
CAediting_228905chr2_188297554_+ENSG00000040341.16ENST00000355780hsa-miR-561-3p73549768735497736mer7354976773549786141-10.21
CAediting_1351755chr19_40282625_-ENSG00000040341.16ENST00000355780hsa-miR-64173550391735503988mer-1a7355039173550418146-11.66
CAediting_1351755chr19_40282625_-ENSG00000040341.16ENST00000355780hsa-miR-64173551157735511626mer7355115673551177142-19.21
CAediting_1160181chr17_7017644_-ENSG00000040341.16ENST00000519961hsa-miR-195-3p73549721735497277mer-m87354972073549741151-6.3
CAediting_396018chr5_1062918_-ENSG00000040341.16ENST00000519961hsa-miR-463573550769735507768mer-1a7355076973550790148-13.31
CAediting_228905chr2_188297554_+ENSG00000040341.16ENST00000519961hsa-miR-561-3p73549768735497736mer7354976773549786141-10.21
CAediting_1351755chr19_40282625_-ENSG00000040341.16ENST00000519961hsa-miR-64173550391735503988mer-1a7355039173550418146-11.66
CAediting_1351755chr19_40282625_-ENSG00000040341.16ENST00000519961hsa-miR-64173551157735511626mer7355115673551177142-19.21
CAediting_396018chr5_1062918_-ENSG00000040341.16ENST00000521727hsa-miR-463573550769735507768mer-1a7355076973550790148-13.31
CAediting_1351755chr19_40282625_-ENSG00000040341.16ENST00000521727hsa-miR-64173550391735503988mer-1a7355039173550418146-11.66
CAediting_1351755chr19_40282625_-ENSG00000040341.16ENST00000521727hsa-miR-64173551157735511626mer7355115673551177142-19.21
CAediting_396018chr5_1062918_-ENSG00000040341.16ENST00000521451hsa-miR-463573550769735507768mer-1a7355076973550790148-13.31
CAediting_1351755chr19_40282625_-ENSG00000040341.16ENST00000521451hsa-miR-64173551157735511626mer7355115673551177142-19.21
CAediting_688081chr9_63819627_+ENSG00000040341.16ENST00000524104hsa-miR-4477b73653468736534747mer-m87365346773653489151-12.66
CAediting_688081chr9_63819627_+ENSG00000040341.16ENST00000524104hsa-miR-4477b73653329736533368mer-1a7365332973653350150-8.02
CAediting_524911chr7_5495852_-ENSG00000040341.16ENST00000524104hsa-miR-589-3p73653454736534607mer-m87365345373653476150-14.77

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for STAU2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000519818.4processed_transcriptSoverviewSoverview
ENST00000521736.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_645967ENST00000519818.4chr8_73742276_--171.60-169.80-170.20
CAediting_645968ENST00000519818.4chr8_73742288_--169.80-169.80-170.20
CAediting_645969ENST00000519818.4chr8_73742290_--169.80-169.80-170.20
CAediting_645970ENST00000519818.4chr8_73742316_--169.10-169.80-170.20
CAediting_645971ENST00000519818.4chr8_73742336_--169.10-169.80-170.20
CAediting_645967ENST00000521736.4chr8_73742276_--153.50-151.70-152.10
CAediting_645968ENST00000521736.4chr8_73742288_--151.70-151.70-152.10
CAediting_645969ENST00000521736.4chr8_73742290_--151.70-151.70-152.10
CAediting_645970ENST00000521736.4chr8_73742316_--151.00-151.70-152.10
CAediting_645971ENST00000521736.4chr8_73742336_--151.00-151.70-152.10

Top

Relation with ADAR for STAU2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

Top

Relation with cancer stages for STAU2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

Top

Relation with survival for STAU2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for STAU2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for STAU2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
STAU2C0023893Liver Cirrhosis, Experimental1CTD_human