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Editing gene: GGCX (CAeditome ID:2677)

Gene summary for GGCX

Gene summary

Gene information	Gene symbol	GGCX
	Gene ID	2677
	Gene name	gamma-glutamyl carboxylase
	Synonyms	VKCFD1
	Cytomap	2p11.2
	Type of gene	protein-coding
	Description	vitamin K-dependent gamma-carboxylasepeptidyl-glutamate 4-carboxylase
	Modification date	20210531
	UniProtAcc	P38435
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for GGCX

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000115486.10

RNA A-to-I editing events in Cancer.

CAediting_196691(85545328, -), CAediting_196692(85545332, -), CAediting_196693(85545334, -), CAediting_196694(85545337, -), CAediting_196695(85545346, -), CAediting_196696(85545347, -), CAediting_196697(85545356, -), CAediting_196698(85545361, -), CAediting_196699(85545369, -), CAediting_196700(85545374, -), CAediting_196701(85545380, -), CAediting_196702(85545387, -), CAediting_196703(85545418, -), CAediting_196704(85545430, -), CAediting_196705(85545434, -), CAediting_196706(85545446, -), CAediting_196707(85545452, -), CAediting_196708(85545453, -), CAediting_196709(85546017, -), CAediting_196710(85546023, -), CAediting_196711(85546031, -), CAediting_196712(85546057, -), CAediting_196713(85546166, -), CAediting_196714(85546190, -), CAediting_196715(85546192, -), CAediting_196716(85546198, -), CAediting_196717(85546204, -), CAediting_196718(85546205, -), CAediting_196719(85546227, -), CAediting_196720(85546241, -), CAediting_196721(85546245, -), CAediting_196722(85546253, -), CAediting_196723(85546265, -), CAediting_196724(85546270, -), CAediting_196725(85546276, -), CAediting_196726(85546286, -), CAediting_196727(85546299, -), CAediting_196728(85546301, -), CAediting_196729(85546311, -), CAediting_196730(85546314, -), CAediting_196731(85546341, -), CAediting_196732(85546360, -), CAediting_196733(85546361, -), CAediting_196734(85546366, -), CAediting_196735(85546379, -), CAediting_196736(85546390, -), CAediting_196737(85546401, -), CAediting_196738(85546409, -), CAediting_196739(85546416, -), CAediting_196740(85546430, -), CAediting_196741(85546447, -), CAediting_196742(85546451, -), CAediting_196743(85546452, -), CAediting_196744(85546460, -), CAediting_196745(85546472, -), CAediting_196746(85546473, -), CAediting_196747(85546482, -), CAediting_196748(85546491, -), CAediting_196749(85546495, -), CAediting_196750(85546500, -), CAediting_196751(85546505, -), CAediting_196752(85546511, -), CAediting_196753(85546512, -), CAediting_196754(85546513, -), CAediting_196755(85546516, -), CAediting_196756(85546524, -), CAediting_196757(85546532, -), CAediting_196758(85546544, -), CAediting_196759(85546546, -), CAediting_196760(85546555, -), CAediting_196761(85546566, -), CAediting_196762(85546570, -), CAediting_196763(85546572, -), CAediting_196764(85546575, -), CAediting_196765(85546582, -), CAediting_196766(85546585, -), CAediting_196767(85546586, -), CAediting_196768(85546588, -), CAediting_196769(85546591, -), CAediting_196770(85546598, -), CAediting_196771(85546601, -), CAediting_196772(85546610, -), CAediting_196773(85546621, -), CAediting_196774(85546622, -), CAediting_196775(85546642, -), CAediting_196776(85546657, -), CAediting_196777(85546666, -), CAediting_196778(85546671, -), CAediting_196779(85546678, -), CAediting_196780(85546697, -), CAediting_196781(85546698, -), CAediting_196782(85546700, -), CAediting_196783(85547920, -), CAediting_196784(85547933, -), CAediting_196785(85547940, -), CAediting_196786(85547942, -), CAediting_196787(85547945, -), CAediting_196788(85547954, -), CAediting_196789(85547955, -), CAediting_196790(85547956, -), CAediting_196791(85547973, -), CAediting_196792(85547977, -), CAediting_196793(85547980, -), CAediting_196794(85547981, -), CAediting_196795(85547986, -), CAediting_196796(85547993, -), CAediting_196797(85547994, -), CAediting_196798(85547995, -), CAediting_196799(85548006, -), CAediting_196800(85548013, -), CAediting_196801(85548015, -), CAediting_196802(85548031, -), CAediting_196803(85548034, -), CAediting_196804(85548048, -), CAediting_196805(85548049, -), CAediting_196806(85548052, -), CAediting_196807(85548053, -), CAediting_196808(85548059, -), CAediting_196809(85548062, -), CAediting_196810(85548075, -), CAediting_196811(85548078, -), CAediting_196812(85548085, -), CAediting_196813(85548089, -), CAediting_196814(85548097, -), CAediting_196815(85548102, -), CAediting_196816(85548110, -), CAediting_196817(85548113, -), CAediting_196818(85548114, -), CAediting_196819(85548115, -), CAediting_196820(85548128, -), CAediting_196821(85548131, -), CAediting_196822(85548135, -), CAediting_196823(85548140, -), CAediting_196824(85548151, -), CAediting_196825(85548153, -), CAediting_196826(85548159, -), CAediting_196827(85548175, -), CAediting_196828(85548191, -), CAediting_196829(85548197, -), CAediting_196830(85549369, -), CAediting_196831(85549381, -), CAediting_196832(85549383, -), CAediting_196833(85549395, -), CAediting_196834(85549419, -), CAediting_196835(85549423, -), CAediting_196836(85549427, -), CAediting_196837(85549429, -), CAediting_196838(85549434, -), CAediting_196839(85549445, -), CAediting_196840(85549451, -), CAediting_196841(85549454, -), CAediting_196842(85549467, -), CAediting_196843(85549468, -), CAediting_196844(85549477, -), CAediting_196845(85549486, -), CAediting_196846(85549490, -), CAediting_196847(85549494, -), CAediting_196848(85549498, -), CAediting_196849(85549499, -), CAediting_196850(85549519, -), CAediting_196851(85549521, -), CAediting_196852(85549525, -), CAediting_196853(85549528, -), CAediting_196854(85549529, -), CAediting_196855(85549530, -), CAediting_196856(85549531, -), CAediting_196857(85549532, -), CAediting_196858(85549534, -), CAediting_196859(85549536, -), CAediting_196860(85549537, -), CAediting_196861(85549538, -), CAediting_196862(85549539, -), CAediting_196863(85549540, -), CAediting_196864(85549543, -), CAediting_196865(85549554, -), CAediting_196866(85549555, -), CAediting_196867(85549556, -), CAediting_196868(85549557, -), CAediting_196869(85549562, -), CAediting_196870(85549564, -), CAediting_196871(85549565, -), CAediting_196872(85549577, -), CAediting_196873(85549585, -), CAediting_196874(85549593, -), CAediting_196875(85549598, -), CAediting_196876(85549603, -), CAediting_196877(85549617, -), CAediting_196878(85549628, -), CAediting_196879(85549633, -), CAediting_196880(85549634, -), CAediting_196881(85549642, -), CAediting_196882(85554508, -), CAediting_196883(85554544, -), CAediting_196884(85554594, -), CAediting_196885(85557020, -), CAediting_196886(85557289, -), CAediting_196887(85557320, -),

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RNA editing positional annotations for GGCX using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_196691	chr2_85545328_-	UTR3
CAediting_196692	chr2_85545332_-	UTR3
CAediting_196693	chr2_85545334_-	UTR3
CAediting_196694	chr2_85545337_-	UTR3
CAediting_196695	chr2_85545346_-	UTR3
CAediting_196696	chr2_85545347_-	UTR3
CAediting_196697	chr2_85545356_-	UTR3
CAediting_196698	chr2_85545361_-	UTR3
CAediting_196699	chr2_85545369_-	UTR3
CAediting_196700	chr2_85545374_-	UTR3
CAediting_196701	chr2_85545380_-	UTR3
CAediting_196702	chr2_85545387_-	UTR3
CAediting_196703	chr2_85545418_-	UTR3
CAediting_196704	chr2_85545430_-	UTR3
CAediting_196705	chr2_85545434_-	UTR3
CAediting_196706	chr2_85545446_-	UTR3
CAediting_196707	chr2_85545452_-	UTR3
CAediting_196708	chr2_85545453_-	UTR3
CAediting_196709	chr2_85546017_-	UTR3
CAediting_196710	chr2_85546023_-	UTR3
CAediting_196711	chr2_85546031_-	UTR3
CAediting_196712	chr2_85546057_-	UTR3
CAediting_196713	chr2_85546166_-	UTR3
CAediting_196714	chr2_85546190_-	UTR3
CAediting_196715	chr2_85546192_-	UTR3
CAediting_196716	chr2_85546198_-	UTR3
CAediting_196717	chr2_85546204_-	UTR3
CAediting_196718	chr2_85546205_-	UTR3
CAediting_196719	chr2_85546227_-	UTR3
CAediting_196720	chr2_85546241_-	UTR3
CAediting_196721	chr2_85546245_-	UTR3
CAediting_196722	chr2_85546253_-	UTR3
CAediting_196723	chr2_85546265_-	UTR3
CAediting_196724	chr2_85546270_-	UTR3
CAediting_196725	chr2_85546276_-	UTR3
CAediting_196726	chr2_85546286_-	UTR3
CAediting_196727	chr2_85546299_-	UTR3
CAediting_196728	chr2_85546301_-	UTR3
CAediting_196729	chr2_85546311_-	UTR3
CAediting_196730	chr2_85546314_-	UTR3
CAediting_196731	chr2_85546341_-	UTR3
CAediting_196732	chr2_85546360_-	UTR3
CAediting_196733	chr2_85546361_-	UTR3
CAediting_196734	chr2_85546366_-	UTR3
CAediting_196735	chr2_85546379_-	UTR3
CAediting_196736	chr2_85546390_-	UTR3
CAediting_196737	chr2_85546401_-	UTR3
CAediting_196738	chr2_85546409_-	UTR3
CAediting_196739	chr2_85546416_-	UTR3
CAediting_196740	chr2_85546430_-	UTR3
CAediting_196741	chr2_85546447_-	UTR3
CAediting_196742	chr2_85546451_-	UTR3
CAediting_196743	chr2_85546452_-	UTR3
CAediting_196744	chr2_85546460_-	UTR3
CAediting_196745	chr2_85546472_-	UTR3
CAediting_196746	chr2_85546473_-	UTR3
CAediting_196747	chr2_85546482_-	UTR3
CAediting_196748	chr2_85546491_-	UTR3
CAediting_196749	chr2_85546495_-	UTR3
CAediting_196750	chr2_85546500_-	UTR3
CAediting_196751	chr2_85546505_-	UTR3
CAediting_196752	chr2_85546511_-	UTR3
CAediting_196753	chr2_85546512_-	UTR3
CAediting_196754	chr2_85546513_-	UTR3
CAediting_196755	chr2_85546516_-	UTR3
CAediting_196756	chr2_85546524_-	UTR3
CAediting_196757	chr2_85546532_-	UTR3
CAediting_196758	chr2_85546544_-	UTR3
CAediting_196759	chr2_85546546_-	UTR3
CAediting_196760	chr2_85546555_-	UTR3
CAediting_196761	chr2_85546566_-	UTR3
CAediting_196762	chr2_85546570_-	UTR3
CAediting_196763	chr2_85546572_-	UTR3
CAediting_196764	chr2_85546575_-	UTR3
CAediting_196765	chr2_85546582_-	UTR3
CAediting_196766	chr2_85546585_-	UTR3
CAediting_196767	chr2_85546586_-	UTR3
CAediting_196768	chr2_85546588_-	UTR3
CAediting_196769	chr2_85546591_-	UTR3
CAediting_196770	chr2_85546598_-	UTR3
CAediting_196771	chr2_85546601_-	UTR3
CAediting_196772	chr2_85546610_-	UTR3
CAediting_196773	chr2_85546621_-	UTR3
CAediting_196774	chr2_85546622_-	UTR3
CAediting_196775	chr2_85546642_-	UTR3
CAediting_196776	chr2_85546657_-	UTR3
CAediting_196777	chr2_85546666_-	UTR3
CAediting_196778	chr2_85546671_-	UTR3
CAediting_196779	chr2_85546678_-	UTR3
CAediting_196780	chr2_85546697_-	UTR3
CAediting_196781	chr2_85546698_-	UTR3
CAediting_196782	chr2_85546700_-	UTR3
CAediting_196783	chr2_85547920_-	ncRNA_exonic
CAediting_196784	chr2_85547933_-	ncRNA_exonic
CAediting_196785	chr2_85547940_-	ncRNA_exonic
CAediting_196786	chr2_85547942_-	ncRNA_exonic
CAediting_196787	chr2_85547945_-	ncRNA_exonic
CAediting_196788	chr2_85547954_-	ncRNA_exonic
CAediting_196789	chr2_85547955_-	ncRNA_exonic
CAediting_196790	chr2_85547956_-	ncRNA_exonic
CAediting_196791	chr2_85547973_-	ncRNA_exonic
CAediting_196792	chr2_85547977_-	ncRNA_exonic
CAediting_196793	chr2_85547980_-	ncRNA_exonic
CAediting_196794	chr2_85547981_-	ncRNA_exonic
CAediting_196795	chr2_85547986_-	ncRNA_exonic
CAediting_196796	chr2_85547993_-	ncRNA_exonic
CAediting_196797	chr2_85547994_-	ncRNA_exonic
CAediting_196798	chr2_85547995_-	ncRNA_exonic
CAediting_196799	chr2_85548006_-	ncRNA_splicing
CAediting_196800	chr2_85548013_-	ncRNA_intronic
CAediting_196801	chr2_85548015_-	ncRNA_intronic
CAediting_196802	chr2_85548031_-	ncRNA_intronic
CAediting_196803	chr2_85548034_-	ncRNA_intronic
CAediting_196804	chr2_85548048_-	ncRNA_intronic
CAediting_196805	chr2_85548049_-	ncRNA_intronic
CAediting_196806	chr2_85548052_-	ncRNA_intronic
CAediting_196807	chr2_85548053_-	ncRNA_intronic
CAediting_196808	chr2_85548059_-	ncRNA_intronic
CAediting_196809	chr2_85548062_-	ncRNA_intronic
CAediting_196810	chr2_85548075_-	ncRNA_intronic
CAediting_196811	chr2_85548078_-	ncRNA_intronic
CAediting_196812	chr2_85548085_-	ncRNA_intronic
CAediting_196813	chr2_85548089_-	ncRNA_intronic
CAediting_196814	chr2_85548097_-	ncRNA_intronic
CAediting_196815	chr2_85548102_-	ncRNA_intronic
CAediting_196816	chr2_85548110_-	ncRNA_intronic
CAediting_196817	chr2_85548113_-	ncRNA_intronic
CAediting_196818	chr2_85548114_-	ncRNA_intronic
CAediting_196819	chr2_85548115_-	ncRNA_intronic
CAediting_196820	chr2_85548128_-	ncRNA_intronic
CAediting_196821	chr2_85548131_-	ncRNA_intronic
CAediting_196822	chr2_85548135_-	ncRNA_intronic
CAediting_196823	chr2_85548140_-	ncRNA_intronic
CAediting_196824	chr2_85548151_-	ncRNA_intronic
CAediting_196825	chr2_85548153_-	ncRNA_intronic
CAediting_196826	chr2_85548159_-	ncRNA_intronic
CAediting_196827	chr2_85548175_-	ncRNA_intronic
CAediting_196828	chr2_85548191_-	ncRNA_intronic
CAediting_196829	chr2_85548197_-	ncRNA_intronic
CAediting_196830	chr2_85549369_-	ncRNA_intronic
CAediting_196831	chr2_85549381_-	ncRNA_intronic
CAediting_196832	chr2_85549383_-	ncRNA_intronic
CAediting_196833	chr2_85549395_-	ncRNA_intronic
CAediting_196834	chr2_85549419_-	ncRNA_intronic
CAediting_196835	chr2_85549423_-	ncRNA_intronic
CAediting_196836	chr2_85549427_-	ncRNA_intronic
CAediting_196837	chr2_85549429_-	ncRNA_intronic
CAediting_196838	chr2_85549434_-	ncRNA_intronic
CAediting_196839	chr2_85549445_-	ncRNA_intronic
CAediting_196840	chr2_85549451_-	ncRNA_intronic
CAediting_196841	chr2_85549454_-	ncRNA_intronic
CAediting_196842	chr2_85549467_-	ncRNA_intronic
CAediting_196843	chr2_85549468_-	ncRNA_intronic
CAediting_196844	chr2_85549477_-	ncRNA_intronic
CAediting_196845	chr2_85549486_-	ncRNA_intronic
CAediting_196846	chr2_85549490_-	ncRNA_intronic
CAediting_196847	chr2_85549494_-	ncRNA_intronic
CAediting_196848	chr2_85549498_-	ncRNA_intronic
CAediting_196849	chr2_85549499_-	ncRNA_intronic
CAediting_196850	chr2_85549519_-	ncRNA_intronic
CAediting_196851	chr2_85549521_-	ncRNA_intronic
CAediting_196852	chr2_85549525_-	ncRNA_intronic
CAediting_196853	chr2_85549528_-	ncRNA_intronic
CAediting_196854	chr2_85549529_-	ncRNA_intronic
CAediting_196855	chr2_85549530_-	ncRNA_intronic
CAediting_196856	chr2_85549531_-	ncRNA_intronic
CAediting_196857	chr2_85549532_-	ncRNA_intronic
CAediting_196858	chr2_85549534_-	ncRNA_intronic
CAediting_196859	chr2_85549536_-	ncRNA_intronic
CAediting_196860	chr2_85549537_-	ncRNA_intronic
CAediting_196861	chr2_85549538_-	ncRNA_intronic
CAediting_196862	chr2_85549539_-	ncRNA_intronic
CAediting_196863	chr2_85549540_-	ncRNA_intronic
CAediting_196864	chr2_85549543_-	ncRNA_intronic
CAediting_196865	chr2_85549554_-	ncRNA_intronic
CAediting_196866	chr2_85549555_-	ncRNA_intronic
CAediting_196867	chr2_85549556_-	ncRNA_intronic
CAediting_196868	chr2_85549557_-	ncRNA_intronic
CAediting_196869	chr2_85549562_-	ncRNA_intronic
CAediting_196870	chr2_85549564_-	ncRNA_intronic
CAediting_196871	chr2_85549565_-	ncRNA_intronic
CAediting_196872	chr2_85549577_-	ncRNA_intronic
CAediting_196873	chr2_85549585_-	ncRNA_intronic
CAediting_196874	chr2_85549593_-	ncRNA_intronic
CAediting_196875	chr2_85549598_-	ncRNA_intronic
CAediting_196876	chr2_85549603_-	ncRNA_intronic
CAediting_196877	chr2_85549617_-	ncRNA_intronic
CAediting_196878	chr2_85549628_-	ncRNA_intronic
CAediting_196879	chr2_85549633_-	ncRNA_intronic
CAediting_196880	chr2_85549634_-	ncRNA_intronic
CAediting_196881	chr2_85549642_-	ncRNA_intronic
CAediting_196882	chr2_85554508_-	ncRNA_exonic
CAediting_196883	chr2_85554544_-	ncRNA_intronic
CAediting_196884	chr2_85554594_-	ncRNA_intronic
CAediting_196885	chr2_85557020_-	ncRNA_intronic
CAediting_196886	chr2_85557289_-	ncRNA_intronic
CAediting_196887	chr2_85557320_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_196691	chr2_85545328_-	SINE	Alu	AluJo
CAediting_196692	chr2_85545332_-	SINE	Alu	AluJo
CAediting_196693	chr2_85545334_-	SINE	Alu	AluJo
CAediting_196694	chr2_85545337_-	SINE	Alu	AluJo
CAediting_196695	chr2_85545346_-	SINE	Alu	AluJo
CAediting_196696	chr2_85545347_-	SINE	Alu	AluJo
CAediting_196697	chr2_85545356_-	SINE	Alu	AluJo
CAediting_196698	chr2_85545361_-	SINE	Alu	AluJo
CAediting_196699	chr2_85545369_-	SINE	Alu	AluJo
CAediting_196700	chr2_85545374_-	SINE	Alu	AluJo
CAediting_196701	chr2_85545380_-	SINE	Alu	AluJo
CAediting_196702	chr2_85545387_-	SINE	Alu	AluJo
CAediting_196703	chr2_85545418_-	SINE	Alu	AluJo
CAediting_196704	chr2_85545430_-	SINE	Alu	AluJo
CAediting_196705	chr2_85545434_-	SINE	Alu	AluJo
CAediting_196706	chr2_85545446_-	SINE	Alu	AluJo
CAediting_196707	chr2_85545452_-	SINE	Alu	AluJo
CAediting_196708	chr2_85545453_-	SINE	Alu	AluJo
CAediting_196714	chr2_85546190_-	SINE	Alu	AluY
CAediting_196715	chr2_85546192_-	SINE	Alu	AluY
CAediting_196716	chr2_85546198_-	SINE	Alu	AluY
CAediting_196717	chr2_85546204_-	SINE	Alu	AluY
CAediting_196718	chr2_85546205_-	SINE	Alu	AluY
CAediting_196719	chr2_85546227_-	SINE	Alu	AluY
CAediting_196720	chr2_85546241_-	SINE	Alu	AluY
CAediting_196721	chr2_85546245_-	SINE	Alu	AluY
CAediting_196722	chr2_85546253_-	SINE	Alu	AluY
CAediting_196723	chr2_85546265_-	SINE	Alu	AluY
CAediting_196724	chr2_85546270_-	SINE	Alu	AluY
CAediting_196725	chr2_85546276_-	SINE	Alu	AluY
CAediting_196726	chr2_85546286_-	SINE	Alu	AluY
CAediting_196727	chr2_85546299_-	SINE	Alu	AluY
CAediting_196728	chr2_85546301_-	SINE	Alu	AluY
CAediting_196729	chr2_85546311_-	SINE	Alu	AluY
CAediting_196730	chr2_85546314_-	SINE	Alu	AluY
CAediting_196731	chr2_85546341_-	SINE	Alu	AluY
CAediting_196732	chr2_85546360_-	SINE	Alu	AluY
CAediting_196733	chr2_85546361_-	SINE	Alu	AluY
CAediting_196734	chr2_85546366_-	SINE	Alu	AluY
CAediting_196735	chr2_85546379_-	SINE	Alu	AluY
CAediting_196736	chr2_85546390_-	SINE	Alu	AluY
CAediting_196737	chr2_85546401_-	SINE	Alu	AluY
CAediting_196738	chr2_85546409_-	SINE	Alu	AluY
CAediting_196739	chr2_85546416_-	SINE	Alu	AluY
CAediting_196741	chr2_85546447_-	SINE	Alu	AluSx1
CAediting_196742	chr2_85546451_-	SINE	Alu	AluSx1
CAediting_196743	chr2_85546452_-	SINE	Alu	AluSx1
CAediting_196744	chr2_85546460_-	SINE	Alu	AluSx1
CAediting_196745	chr2_85546472_-	SINE	Alu	AluSx1
CAediting_196746	chr2_85546473_-	SINE	Alu	AluSx1
CAediting_196747	chr2_85546482_-	SINE	Alu	AluSx1
CAediting_196748	chr2_85546491_-	SINE	Alu	AluSx1
CAediting_196749	chr2_85546495_-	SINE	Alu	AluSx1
CAediting_196750	chr2_85546500_-	SINE	Alu	AluSx1
CAediting_196751	chr2_85546505_-	SINE	Alu	AluSx1
CAediting_196752	chr2_85546511_-	SINE	Alu	AluSx1
CAediting_196753	chr2_85546512_-	SINE	Alu	AluSx1
CAediting_196754	chr2_85546513_-	SINE	Alu	AluSx1
CAediting_196755	chr2_85546516_-	SINE	Alu	AluSx1
CAediting_196756	chr2_85546524_-	SINE	Alu	AluSx1
CAediting_196757	chr2_85546532_-	SINE	Alu	AluSx1
CAediting_196758	chr2_85546544_-	SINE	Alu	AluSx1
CAediting_196759	chr2_85546546_-	SINE	Alu	AluSx1
CAediting_196760	chr2_85546555_-	SINE	Alu	AluSx1
CAediting_196761	chr2_85546566_-	SINE	Alu	AluSx1
CAediting_196762	chr2_85546570_-	SINE	Alu	AluSx1
CAediting_196763	chr2_85546572_-	SINE	Alu	AluSx1
CAediting_196764	chr2_85546575_-	SINE	Alu	AluSx1
CAediting_196765	chr2_85546582_-	SINE	Alu	AluSx1
CAediting_196766	chr2_85546585_-	SINE	Alu	AluSx1
CAediting_196767	chr2_85546586_-	SINE	Alu	AluSx1
CAediting_196768	chr2_85546588_-	SINE	Alu	AluSx1
CAediting_196769	chr2_85546591_-	SINE	Alu	AluSx1
CAediting_196770	chr2_85546598_-	SINE	Alu	AluSx1
CAediting_196771	chr2_85546601_-	SINE	Alu	AluSx1
CAediting_196772	chr2_85546610_-	SINE	Alu	AluSx1
CAediting_196773	chr2_85546621_-	SINE	Alu	AluSx1
CAediting_196774	chr2_85546622_-	SINE	Alu	AluSx1
CAediting_196775	chr2_85546642_-	SINE	Alu	AluSx1
CAediting_196776	chr2_85546657_-	SINE	Alu	AluSx1
CAediting_196777	chr2_85546666_-	SINE	Alu	AluSx1
CAediting_196778	chr2_85546671_-	SINE	Alu	AluSx1
CAediting_196779	chr2_85546678_-	SINE	Alu	AluSx1
CAediting_196780	chr2_85546697_-	SINE	Alu	AluSx1
CAediting_196781	chr2_85546698_-	SINE	Alu	AluSx1
CAediting_196782	chr2_85546700_-	SINE	Alu	AluSx1
CAediting_196783	chr2_85547920_-	SINE	Alu	AluSx1
CAediting_196784	chr2_85547933_-	SINE	Alu	AluSx1
CAediting_196785	chr2_85547940_-	SINE	Alu	AluSx1
CAediting_196786	chr2_85547942_-	SINE	Alu	AluSx1
CAediting_196787	chr2_85547945_-	SINE	Alu	AluSx1
CAediting_196788	chr2_85547954_-	SINE	Alu	AluSx1
CAediting_196789	chr2_85547955_-	SINE	Alu	AluSx1
CAediting_196790	chr2_85547956_-	SINE	Alu	AluSx1
CAediting_196791	chr2_85547973_-	SINE	Alu	AluSx1
CAediting_196792	chr2_85547977_-	SINE	Alu	AluSx1
CAediting_196793	chr2_85547980_-	SINE	Alu	AluSx1
CAediting_196794	chr2_85547981_-	SINE	Alu	AluSx1
CAediting_196795	chr2_85547986_-	SINE	Alu	AluSx1
CAediting_196796	chr2_85547993_-	SINE	Alu	AluSx1
CAediting_196797	chr2_85547994_-	SINE	Alu	AluSx1
CAediting_196798	chr2_85547995_-	SINE	Alu	AluSx1
CAediting_196799	chr2_85548006_-	SINE	Alu	AluSx1
CAediting_196800	chr2_85548013_-	SINE	Alu	AluSx1
CAediting_196801	chr2_85548015_-	SINE	Alu	AluSx1
CAediting_196802	chr2_85548031_-	SINE	Alu	AluSx1
CAediting_196803	chr2_85548034_-	SINE	Alu	AluSx1
CAediting_196804	chr2_85548048_-	SINE	Alu	AluSx1
CAediting_196805	chr2_85548049_-	SINE	Alu	AluSx1
CAediting_196806	chr2_85548052_-	SINE	Alu	AluSx1
CAediting_196807	chr2_85548053_-	SINE	Alu	AluSx1
CAediting_196808	chr2_85548059_-	SINE	Alu	AluSx1
CAediting_196809	chr2_85548062_-	SINE	Alu	AluSx1
CAediting_196810	chr2_85548075_-	SINE	Alu	AluSx1
CAediting_196811	chr2_85548078_-	SINE	Alu	AluSx1
CAediting_196812	chr2_85548085_-	SINE	Alu	AluSx1
CAediting_196813	chr2_85548089_-	SINE	Alu	AluSx1
CAediting_196814	chr2_85548097_-	SINE	Alu	AluSx1
CAediting_196815	chr2_85548102_-	SINE	Alu	AluSx1
CAediting_196816	chr2_85548110_-	SINE	Alu	AluSx1
CAediting_196817	chr2_85548113_-	SINE	Alu	AluSx1
CAediting_196818	chr2_85548114_-	SINE	Alu	AluSx1
CAediting_196819	chr2_85548115_-	SINE	Alu	AluSx1
CAediting_196820	chr2_85548128_-	SINE	Alu	AluSx1
CAediting_196821	chr2_85548131_-	SINE	Alu	AluSx1
CAediting_196822	chr2_85548135_-	SINE	Alu	AluSx1
CAediting_196823	chr2_85548140_-	SINE	Alu	AluSx1
CAediting_196824	chr2_85548151_-	SINE	Alu	AluSx1
CAediting_196825	chr2_85548153_-	SINE	Alu	AluSx1
CAediting_196826	chr2_85548159_-	SINE	Alu	AluSx1
CAediting_196827	chr2_85548175_-	SINE	Alu	AluSx1
CAediting_196828	chr2_85548191_-	SINE	Alu	AluSx1
CAediting_196829	chr2_85548197_-	SINE	Alu	AluSx1
CAediting_196830	chr2_85549369_-	SINE	Alu	AluSz6
CAediting_196831	chr2_85549381_-	SINE	Alu	AluSz6
CAediting_196832	chr2_85549383_-	SINE	Alu	AluSz6
CAediting_196833	chr2_85549395_-	SINE	Alu	AluSz6
CAediting_196834	chr2_85549419_-	SINE	Alu	AluSz6
CAediting_196835	chr2_85549423_-	SINE	Alu	AluSz6
CAediting_196836	chr2_85549427_-	SINE	Alu	AluSz6
CAediting_196837	chr2_85549429_-	SINE	Alu	AluSz6
CAediting_196838	chr2_85549434_-	SINE	Alu	AluSz6
CAediting_196839	chr2_85549445_-	SINE	Alu	AluSz6
CAediting_196840	chr2_85549451_-	SINE	Alu	AluSz6
CAediting_196841	chr2_85549454_-	SINE	Alu	AluSz6
CAediting_196842	chr2_85549467_-	SINE	Alu	AluSz6
CAediting_196843	chr2_85549468_-	SINE	Alu	AluSz6
CAediting_196844	chr2_85549477_-	SINE	Alu	AluSz6
CAediting_196845	chr2_85549486_-	SINE	Alu	AluSz6
CAediting_196846	chr2_85549490_-	SINE	Alu	AluSz6
CAediting_196847	chr2_85549494_-	SINE	Alu	AluSz6
CAediting_196848	chr2_85549498_-	SINE	Alu	AluSz6
CAediting_196849	chr2_85549499_-	SINE	Alu	AluSz6
CAediting_196850	chr2_85549519_-	SINE	Alu	AluSz6
CAediting_196851	chr2_85549521_-	SINE	Alu	AluSz6
CAediting_196852	chr2_85549525_-	SINE	Alu	AluSz6
CAediting_196853	chr2_85549528_-	SINE	Alu	AluSz6
CAediting_196854	chr2_85549529_-	SINE	Alu	AluSz6
CAediting_196855	chr2_85549530_-	SINE	Alu	AluSz6
CAediting_196856	chr2_85549531_-	SINE	Alu	AluSz6
CAediting_196857	chr2_85549532_-	SINE	Alu	AluSz6
CAediting_196858	chr2_85549534_-	SINE	Alu	AluSz6
CAediting_196859	chr2_85549536_-	SINE	Alu	AluSz6
CAediting_196860	chr2_85549537_-	SINE	Alu	AluSz6
CAediting_196861	chr2_85549538_-	SINE	Alu	AluSz6
CAediting_196862	chr2_85549539_-	SINE	Alu	AluSz6
CAediting_196863	chr2_85549540_-	SINE	Alu	AluSz6
CAediting_196864	chr2_85549543_-	SINE	Alu	AluSz6
CAediting_196865	chr2_85549554_-	SINE	Alu	AluSz6
CAediting_196866	chr2_85549555_-	SINE	Alu	AluSz6
CAediting_196867	chr2_85549556_-	SINE	Alu	AluSz6
CAediting_196868	chr2_85549557_-	SINE	Alu	AluSz6
CAediting_196869	chr2_85549562_-	SINE	Alu	AluSz6
CAediting_196870	chr2_85549564_-	SINE	Alu	AluSz6
CAediting_196871	chr2_85549565_-	SINE	Alu	AluSz6
CAediting_196872	chr2_85549577_-	SINE	Alu	AluSz6
CAediting_196873	chr2_85549585_-	SINE	Alu	AluSz6
CAediting_196874	chr2_85549593_-	SINE	Alu	AluSz6
CAediting_196875	chr2_85549598_-	SINE	Alu	AluSz6
CAediting_196876	chr2_85549603_-	SINE	Alu	AluSz6
CAediting_196877	chr2_85549617_-	SINE	Alu	AluSz6
CAediting_196878	chr2_85549628_-	SINE	Alu	AluSz6
CAediting_196879	chr2_85549633_-	SINE	Alu	AluSz6
CAediting_196880	chr2_85549634_-	SINE	Alu	AluSz6
CAediting_196881	chr2_85549642_-	SINE	Alu	AluSz6
CAediting_196882	chr2_85554508_-	SINE	Alu	AluJo
CAediting_196883	chr2_85554544_-	SINE	Alu	AluJo
CAediting_196884	chr2_85554594_-	SINE	Alu	AluJo
CAediting_196885	chr2_85557020_-	SINE	Alu	FRAM
CAediting_196886	chr2_85557289_-	SINE	Alu	AluJr
CAediting_196887	chr2_85557320_-	SINE	Alu	AluJr

Top

RNA A-to-I editing events in the alternative splicing sites for GGCX

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000115486.10.GGCX.

Correlation between RNA A-to-I editing and PSI for ENSG00000115486.10.GGCX.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for GGCX

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

CESC.CAediting_196770.ENSG00000115486.GGCX.png
Soverview

KIRC.CAediting_196848.ENSG00000115486.GGCX.png
Soverview

LUSC.CAediting_196770.ENSG00000115486.GGCX.png
Soverview

OV.CAediting_196770.ENSG00000115486.GGCX.png
Soverview

Top

Protein coding region RNA A-to-I editings for GGCX

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for GGCX

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000115486.10	ENST00000423570	hsa-miR-605-3p	85555198	85555205	8mer-1a	85555198	85555219	152	-18.75
CAediting_1524209	chrX_134546392_-	ENSG00000115486.10	ENST00000423570	hsa-miR-503-5p	85558544	85558550	7mer-1a	85558544	85558566	150	-28.6
CAediting_1524209	chrX_134546392_-	ENSG00000115486.10	ENST00000421496	hsa-miR-503-5p	85558544	85558550	7mer-1a	85558544	85558566	150	-28.6
CAediting_1524209	chrX_134546392_-	ENSG00000115486.10	ENST00000428479	hsa-miR-503-5p	85558544	85558550	7mer-1a	85558544	85558566	150	-28.6

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for GGCX

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000233838.7	protein_coding
ENST00000465637.4	processed_transcript
ENST00000473665.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_196691	ENST00000233838.7	chr2_85545328_-	-2533.10	-2533.10	-2696.70
CAediting_196692	ENST00000233838.7	chr2_85545332_-	-2532.80	-2533.10	-2696.70
CAediting_196693	ENST00000233838.7	chr2_85545334_-	-2532.10	-2533.10	-2696.70
CAediting_196694	ENST00000233838.7	chr2_85545337_-	-2540.10	-2533.10	-2696.70
CAediting_196695	ENST00000233838.7	chr2_85545346_-	-2532.90	-2533.10	-2696.70
CAediting_196696	ENST00000233838.7	chr2_85545347_-	-2535.90	-2533.10	-2696.70
CAediting_196697	ENST00000233838.7	chr2_85545356_-	-2533.00	-2533.10	-2696.70
CAediting_196698	ENST00000233838.7	chr2_85545361_-	-2534.00	-2533.10	-2696.70
CAediting_196699	ENST00000233838.7	chr2_85545369_-	-2538.20	-2533.10	-2696.70
CAediting_196700	ENST00000233838.7	chr2_85545374_-	-2533.80	-2533.10	-2696.70
CAediting_196701	ENST00000233838.7	chr2_85545380_-	-2534.60	-2533.10	-2696.70
CAediting_196702	ENST00000233838.7	chr2_85545387_-	-2533.20	-2533.10	-2696.70
CAediting_196703	ENST00000233838.7	chr2_85545418_-	-2533.50	-2533.10	-2696.70
CAediting_196704	ENST00000233838.7	chr2_85545430_-	-2533.10	-2533.10	-2696.70
CAediting_196705	ENST00000233838.7	chr2_85545434_-	-2535.40	-2533.10	-2696.70
CAediting_196706	ENST00000233838.7	chr2_85545446_-	-2533.10	-2533.10	-2696.70
CAediting_196707	ENST00000233838.7	chr2_85545452_-	-2532.70	-2533.10	-2696.70
CAediting_196708	ENST00000233838.7	chr2_85545453_-	-2533.20	-2533.10	-2696.70
CAediting_196709	ENST00000233838.7	chr2_85546017_-	-2533.30	-2533.10	-2696.70
CAediting_196710	ENST00000233838.7	chr2_85546023_-	-2534.60	-2533.10	-2696.70
CAediting_196711	ENST00000233838.7	chr2_85546031_-	-2536.60	-2533.10	-2696.70
CAediting_196712	ENST00000233838.7	chr2_85546057_-	-2534.20	-2533.10	-2696.70
CAediting_196713	ENST00000233838.7	chr2_85546166_-	-2533.10	-2533.10	-2696.70
CAediting_196714	ENST00000233838.7	chr2_85546190_-	-2532.80	-2533.10	-2696.70
CAediting_196715	ENST00000233838.7	chr2_85546192_-	-2534.70	-2533.10	-2696.70
CAediting_196716	ENST00000233838.7	chr2_85546198_-	-2533.70	-2533.10	-2696.70
CAediting_196717	ENST00000233838.7	chr2_85546204_-	-2537.90	-2533.10	-2696.70
CAediting_196718	ENST00000233838.7	chr2_85546205_-	-2535.00	-2533.10	-2696.70
CAediting_196719	ENST00000233838.7	chr2_85546227_-	-2534.80	-2533.10	-2696.70
CAediting_196720	ENST00000233838.7	chr2_85546241_-	-2535.60	-2533.10	-2696.70
CAediting_196721	ENST00000233838.7	chr2_85546245_-	-2532.80	-2533.10	-2696.70
CAediting_196722	ENST00000233838.7	chr2_85546253_-	-2533.40	-2533.10	-2696.70
CAediting_196723	ENST00000233838.7	chr2_85546265_-	-2534.40	-2533.10	-2696.70
CAediting_196724	ENST00000233838.7	chr2_85546270_-	-2535.80	-2533.10	-2696.70
CAediting_196725	ENST00000233838.7	chr2_85546276_-	-2533.50	-2533.10	-2696.70
CAediting_196726	ENST00000233838.7	chr2_85546286_-	-2533.10	-2533.10	-2696.70
CAediting_196727	ENST00000233838.7	chr2_85546299_-	-2535.50	-2533.10	-2696.70
CAediting_196728	ENST00000233838.7	chr2_85546301_-	-2536.70	-2533.10	-2696.70
CAediting_196729	ENST00000233838.7	chr2_85546311_-	-2538.70	-2533.10	-2696.70
CAediting_196730	ENST00000233838.7	chr2_85546314_-	-2535.50	-2533.10	-2696.70
CAediting_196731	ENST00000233838.7	chr2_85546341_-	-2533.40	-2533.10	-2696.70
CAediting_196732	ENST00000233838.7	chr2_85546360_-	-2533.10	-2533.10	-2696.70
CAediting_196733	ENST00000233838.7	chr2_85546361_-	-2534.20	-2533.10	-2696.70
CAediting_196734	ENST00000233838.7	chr2_85546366_-	-2533.40	-2533.10	-2696.70
CAediting_196735	ENST00000233838.7	chr2_85546379_-	-2534.60	-2533.10	-2696.70
CAediting_196736	ENST00000233838.7	chr2_85546390_-	-2532.80	-2533.10	-2696.70
CAediting_196737	ENST00000233838.7	chr2_85546401_-	-2535.20	-2533.10	-2696.70
CAediting_196738	ENST00000233838.7	chr2_85546409_-	-2532.70	-2533.10	-2696.70
CAediting_196739	ENST00000233838.7	chr2_85546416_-	-2534.20	-2533.10	-2696.70
CAediting_196740	ENST00000233838.7	chr2_85546430_-	-2532.80	-2533.10	-2696.70
CAediting_196741	ENST00000233838.7	chr2_85546447_-	-2532.10	-2533.10	-2696.70
CAediting_196742	ENST00000233838.7	chr2_85546451_-	-2533.10	-2533.10	-2696.70
CAediting_196743	ENST00000233838.7	chr2_85546452_-	-2539.50	-2533.10	-2696.70
CAediting_196744	ENST00000233838.7	chr2_85546460_-	-2533.10	-2533.10	-2696.70
CAediting_196745	ENST00000233838.7	chr2_85546472_-	-2532.70	-2533.10	-2696.70
CAediting_196746	ENST00000233838.7	chr2_85546473_-	-2533.20	-2533.10	-2696.70
CAediting_196747	ENST00000233838.7	chr2_85546482_-	-2531.80	-2533.10	-2696.70
CAediting_196748	ENST00000233838.7	chr2_85546491_-	-2537.00	-2533.10	-2696.70
CAediting_196749	ENST00000233838.7	chr2_85546495_-	-2532.50	-2533.10	-2696.70
CAediting_196750	ENST00000233838.7	chr2_85546500_-	-2532.30	-2533.10	-2696.70
CAediting_196751	ENST00000233838.7	chr2_85546505_-	-2540.30	-2533.10	-2696.70
CAediting_196752	ENST00000233838.7	chr2_85546511_-	-2533.10	-2533.10	-2696.70
CAediting_196753	ENST00000233838.7	chr2_85546512_-	-2533.40	-2533.10	-2696.70
CAediting_196754	ENST00000233838.7	chr2_85546513_-	-2539.10	-2533.10	-2696.70
CAediting_196755	ENST00000233838.7	chr2_85546516_-	-2535.70	-2533.10	-2696.70
CAediting_196756	ENST00000233838.7	chr2_85546524_-	-2532.40	-2533.10	-2696.70
CAediting_196757	ENST00000233838.7	chr2_85546532_-	-2532.40	-2533.10	-2696.70
CAediting_196758	ENST00000233838.7	chr2_85546544_-	-2532.20	-2533.10	-2696.70
CAediting_196759	ENST00000233838.7	chr2_85546546_-	-2532.80	-2533.10	-2696.70
CAediting_196760	ENST00000233838.7	chr2_85546555_-	-2533.10	-2533.10	-2696.70
CAediting_196761	ENST00000233838.7	chr2_85546566_-	-2537.00	-2533.10	-2696.70
CAediting_196762	ENST00000233838.7	chr2_85546570_-	-2535.50	-2533.10	-2696.70
CAediting_196763	ENST00000233838.7	chr2_85546572_-	-2532.70	-2533.10	-2696.70
CAediting_196764	ENST00000233838.7	chr2_85546575_-	-2532.70	-2533.10	-2696.70
CAediting_196765	ENST00000233838.7	chr2_85546582_-	-2532.70	-2533.10	-2696.70
CAediting_196766	ENST00000233838.7	chr2_85546585_-	-2539.70	-2533.10	-2696.70
CAediting_196767	ENST00000233838.7	chr2_85546586_-	-2532.40	-2533.10	-2696.70
CAediting_196768	ENST00000233838.7	chr2_85546588_-	-2533.10	-2533.10	-2696.70
CAediting_196769	ENST00000233838.7	chr2_85546591_-	-2532.50	-2533.10	-2696.70
CAediting_196770	ENST00000233838.7	chr2_85546598_-	-2532.80	-2533.10	-2696.70
CAediting_196771	ENST00000233838.7	chr2_85546601_-	-2540.00	-2533.10	-2696.70
CAediting_196772	ENST00000233838.7	chr2_85546610_-	-2532.40	-2533.10	-2696.70
CAediting_196773	ENST00000233838.7	chr2_85546621_-	-2532.80	-2533.10	-2696.70
CAediting_196774	ENST00000233838.7	chr2_85546622_-	-2532.80	-2533.10	-2696.70
CAediting_196775	ENST00000233838.7	chr2_85546642_-	-2532.80	-2533.10	-2696.70
CAediting_196776	ENST00000233838.7	chr2_85546657_-	-2532.90	-2533.10	-2696.70
CAediting_196777	ENST00000233838.7	chr2_85546666_-	-2532.40	-2533.10	-2696.70
CAediting_196778	ENST00000233838.7	chr2_85546671_-	-2532.80	-2533.10	-2696.70
CAediting_196779	ENST00000233838.7	chr2_85546678_-	-2532.40	-2533.10	-2696.70
CAediting_196780	ENST00000233838.7	chr2_85546697_-	-2535.70	-2533.10	-2696.70
CAediting_196781	ENST00000233838.7	chr2_85546698_-	-2533.60	-2533.10	-2696.70
CAediting_196782	ENST00000233838.7	chr2_85546700_-	-2534.40	-2533.10	-2696.70
CAediting_196783	ENST00000233838.7	chr2_85547920_-	-2533.80	-2533.10	-2696.70
CAediting_196784	ENST00000233838.7	chr2_85547933_-	-2536.50	-2533.10	-2696.70
CAediting_196785	ENST00000233838.7	chr2_85547940_-	-2533.30	-2533.10	-2696.70
CAediting_196786	ENST00000233838.7	chr2_85547942_-	-2532.70	-2533.10	-2696.70
CAediting_196787	ENST00000233838.7	chr2_85547945_-	-2533.10	-2533.10	-2696.70
CAediting_196788	ENST00000233838.7	chr2_85547954_-	-2533.40	-2533.10	-2696.70
CAediting_196789	ENST00000233838.7	chr2_85547955_-	-2536.30	-2533.10	-2696.70
CAediting_196790	ENST00000233838.7	chr2_85547956_-	-2533.10	-2533.10	-2696.70
CAediting_196791	ENST00000233838.7	chr2_85547973_-	-2533.40	-2533.10	-2696.70
CAediting_196792	ENST00000233838.7	chr2_85547977_-	-2534.10	-2533.10	-2696.70
CAediting_196793	ENST00000233838.7	chr2_85547980_-	-2536.10	-2533.10	-2696.70
CAediting_196794	ENST00000233838.7	chr2_85547981_-	-2539.50	-2533.10	-2696.70
CAediting_196795	ENST00000233838.7	chr2_85547986_-	-2533.10	-2533.10	-2696.70
CAediting_196796	ENST00000233838.7	chr2_85547993_-	-2533.60	-2533.10	-2696.70
CAediting_196797	ENST00000233838.7	chr2_85547994_-	-2533.90	-2533.10	-2696.70
CAediting_196798	ENST00000233838.7	chr2_85547995_-	-2534.00	-2533.10	-2696.70
CAediting_196799	ENST00000233838.7	chr2_85548006_-	-2533.80	-2533.10	-2696.70
CAediting_196800	ENST00000233838.7	chr2_85548013_-	-2533.00	-2533.10	-2696.70
CAediting_196801	ENST00000233838.7	chr2_85548015_-	-2532.70	-2533.10	-2696.70
CAediting_196802	ENST00000233838.7	chr2_85548031_-	-2533.70	-2533.10	-2696.70
CAediting_196803	ENST00000233838.7	chr2_85548034_-	-2531.80	-2533.10	-2696.70
CAediting_196804	ENST00000233838.7	chr2_85548048_-	-2536.30	-2533.10	-2696.70
CAediting_196805	ENST00000233838.7	chr2_85548049_-	-2535.90	-2533.10	-2696.70
CAediting_196806	ENST00000233838.7	chr2_85548052_-	-2539.00	-2533.10	-2696.70
CAediting_196807	ENST00000233838.7	chr2_85548053_-	-2534.70	-2533.10	-2696.70
CAediting_196808	ENST00000233838.7	chr2_85548059_-	-2536.20	-2533.10	-2696.70
CAediting_196809	ENST00000233838.7	chr2_85548062_-	-2532.70	-2533.10	-2696.70
CAediting_196810	ENST00000233838.7	chr2_85548075_-	-2533.50	-2533.10	-2696.70
CAediting_196811	ENST00000233838.7	chr2_85548078_-	-2535.50	-2533.10	-2696.70
CAediting_196812	ENST00000233838.7	chr2_85548085_-	-2535.10	-2533.10	-2696.70
CAediting_196813	ENST00000233838.7	chr2_85548089_-	-2532.70	-2533.10	-2696.70
CAediting_196814	ENST00000233838.7	chr2_85548097_-	-2532.40	-2533.10	-2696.70
CAediting_196815	ENST00000233838.7	chr2_85548102_-	-2532.70	-2533.10	-2696.70
CAediting_196816	ENST00000233838.7	chr2_85548110_-	-2533.70	-2533.10	-2696.70
CAediting_196817	ENST00000233838.7	chr2_85548113_-	-2532.90	-2533.10	-2696.70
CAediting_196818	ENST00000233838.7	chr2_85548114_-	-2534.10	-2533.10	-2696.70
CAediting_196819	ENST00000233838.7	chr2_85548115_-	-2533.10	-2533.10	-2696.70
CAediting_196820	ENST00000233838.7	chr2_85548128_-	-2532.40	-2533.10	-2696.70
CAediting_196821	ENST00000233838.7	chr2_85548131_-	-2533.10	-2533.10	-2696.70
CAediting_196822	ENST00000233838.7	chr2_85548135_-	-2532.10	-2533.10	-2696.70
CAediting_196823	ENST00000233838.7	chr2_85548140_-	-2532.10	-2533.10	-2696.70
CAediting_196824	ENST00000233838.7	chr2_85548151_-	-2532.40	-2533.10	-2696.70
CAediting_196825	ENST00000233838.7	chr2_85548153_-	-2533.10	-2533.10	-2696.70
CAediting_196826	ENST00000233838.7	chr2_85548159_-	-2532.40	-2533.10	-2696.70
CAediting_196827	ENST00000233838.7	chr2_85548175_-	-2533.30	-2533.10	-2696.70
CAediting_196828	ENST00000233838.7	chr2_85548191_-	-2533.10	-2533.10	-2696.70
CAediting_196829	ENST00000233838.7	chr2_85548197_-	-2534.60	-2533.10	-2696.70
CAediting_196830	ENST00000233838.7	chr2_85549369_-	-2533.10	-2533.10	-2696.70
CAediting_196831	ENST00000233838.7	chr2_85549381_-	-2533.20	-2533.10	-2696.70
CAediting_196832	ENST00000233838.7	chr2_85549383_-	-2532.80	-2533.10	-2696.70
CAediting_196833	ENST00000233838.7	chr2_85549395_-	-2532.80	-2533.10	-2696.70
CAediting_196834	ENST00000233838.7	chr2_85549419_-	-2532.40	-2533.10	-2696.70
CAediting_196835	ENST00000233838.7	chr2_85549423_-	-2535.30	-2533.10	-2696.70
CAediting_196836	ENST00000233838.7	chr2_85549427_-	-2532.50	-2533.10	-2696.70
CAediting_196837	ENST00000233838.7	chr2_85549429_-	-2532.20	-2533.10	-2696.70
CAediting_196838	ENST00000233838.7	chr2_85549434_-	-2532.20	-2533.10	-2696.70
CAediting_196839	ENST00000233838.7	chr2_85549445_-	-2532.20	-2533.10	-2696.70
CAediting_196840	ENST00000233838.7	chr2_85549451_-	-2532.20	-2533.10	-2696.70
CAediting_196841	ENST00000233838.7	chr2_85549454_-	-2532.40	-2533.10	-2696.70
CAediting_196842	ENST00000233838.7	chr2_85549467_-	-2533.10	-2533.10	-2696.70
CAediting_196843	ENST00000233838.7	chr2_85549468_-	-2532.60	-2533.10	-2696.70
CAediting_196844	ENST00000233838.7	chr2_85549477_-	-2533.50	-2533.10	-2696.70
CAediting_196845	ENST00000233838.7	chr2_85549486_-	-2532.40	-2533.10	-2696.70
CAediting_196846	ENST00000233838.7	chr2_85549490_-	-2533.10	-2533.10	-2696.70
CAediting_196847	ENST00000233838.7	chr2_85549494_-	-2535.00	-2533.10	-2696.70
CAediting_196848	ENST00000233838.7	chr2_85549498_-	-2533.10	-2533.10	-2696.70
CAediting_196849	ENST00000233838.7	chr2_85549499_-	-2533.20	-2533.10	-2696.70
CAediting_196850	ENST00000233838.7	chr2_85549519_-	-2537.30	-2533.10	-2696.70
CAediting_196851	ENST00000233838.7	chr2_85549521_-	-2537.00	-2533.10	-2696.70
CAediting_196852	ENST00000233838.7	chr2_85549525_-	-2533.10	-2533.10	-2696.70
CAediting_196853	ENST00000233838.7	chr2_85549528_-	-2532.80	-2533.10	-2696.70
CAediting_196854	ENST00000233838.7	chr2_85549529_-	-2533.20	-2533.10	-2696.70
CAediting_196855	ENST00000233838.7	chr2_85549530_-	-2533.20	-2533.10	-2696.70
CAediting_196856	ENST00000233838.7	chr2_85549531_-	-2533.20	-2533.10	-2696.70
CAediting_196857	ENST00000233838.7	chr2_85549532_-	-2532.80	-2533.10	-2696.70
CAediting_196858	ENST00000233838.7	chr2_85549534_-	-2533.10	-2533.10	-2696.70
CAediting_196859	ENST00000233838.7	chr2_85549536_-	-2533.10	-2533.10	-2696.70
CAediting_196860	ENST00000233838.7	chr2_85549537_-	-2533.20	-2533.10	-2696.70
CAediting_196861	ENST00000233838.7	chr2_85549538_-	-2533.20	-2533.10	-2696.70
CAediting_196862	ENST00000233838.7	chr2_85549539_-	-2533.20	-2533.10	-2696.70
CAediting_196863	ENST00000233838.7	chr2_85549540_-	-2532.20	-2533.10	-2696.70
CAediting_196864	ENST00000233838.7	chr2_85549543_-	-2533.10	-2533.10	-2696.70
CAediting_196865	ENST00000233838.7	chr2_85549554_-	-2533.10	-2533.10	-2696.70
CAediting_196866	ENST00000233838.7	chr2_85549555_-	-2533.50	-2533.10	-2696.70
CAediting_196867	ENST00000233838.7	chr2_85549556_-	-2533.40	-2533.10	-2696.70
CAediting_196868	ENST00000233838.7	chr2_85549557_-	-2534.30	-2533.10	-2696.70
CAediting_196869	ENST00000233838.7	chr2_85549562_-	-2533.10	-2533.10	-2696.70
CAediting_196870	ENST00000233838.7	chr2_85549564_-	-2533.10	-2533.10	-2696.70
CAediting_196871	ENST00000233838.7	chr2_85549565_-	-2533.50	-2533.10	-2696.70
CAediting_196872	ENST00000233838.7	chr2_85549577_-	-2533.40	-2533.10	-2696.70
CAediting_196873	ENST00000233838.7	chr2_85549585_-	-2533.60	-2533.10	-2696.70
CAediting_196874	ENST00000233838.7	chr2_85549593_-	-2532.20	-2533.10	-2696.70
CAediting_196875	ENST00000233838.7	chr2_85549598_-	-2532.70	-2533.10	-2696.70
CAediting_196876	ENST00000233838.7	chr2_85549603_-	-2537.80	-2533.10	-2696.70
CAediting_196877	ENST00000233838.7	chr2_85549617_-	-2532.20	-2533.10	-2696.70
CAediting_196878	ENST00000233838.7	chr2_85549628_-	-2532.40	-2533.10	-2696.70
CAediting_196879	ENST00000233838.7	chr2_85549633_-	-2533.10	-2533.10	-2696.70
CAediting_196880	ENST00000233838.7	chr2_85549634_-	-2533.20	-2533.10	-2696.70
CAediting_196881	ENST00000233838.7	chr2_85549642_-	-2533.40	-2533.10	-2696.70
CAediting_196783	ENST00000465637.4	chr2_85547920_-	-177.10	-177.10	-198.40
CAediting_196784	ENST00000465637.4	chr2_85547933_-	-181.20	-177.10	-198.40
CAediting_196785	ENST00000465637.4	chr2_85547940_-	-177.30	-177.10	-198.40
CAediting_196786	ENST00000465637.4	chr2_85547942_-	-176.70	-177.10	-198.40
CAediting_196787	ENST00000465637.4	chr2_85547945_-	-177.10	-177.10	-198.40
CAediting_196788	ENST00000465637.4	chr2_85547954_-	-179.00	-177.10	-198.40
CAediting_196789	ENST00000465637.4	chr2_85547955_-	-179.80	-177.10	-198.40
CAediting_196790	ENST00000465637.4	chr2_85547956_-	-176.50	-177.10	-198.40
CAediting_196791	ENST00000465637.4	chr2_85547973_-	-176.70	-177.10	-198.40
CAediting_196792	ENST00000465637.4	chr2_85547977_-	-177.00	-177.10	-198.40
CAediting_196793	ENST00000465637.4	chr2_85547980_-	-178.00	-177.10	-198.40
CAediting_196794	ENST00000465637.4	chr2_85547981_-	-179.10	-177.10	-198.40
CAediting_196795	ENST00000465637.4	chr2_85547986_-	-176.50	-177.10	-198.40
CAediting_196796	ENST00000465637.4	chr2_85547993_-	-178.20	-177.10	-198.40
CAediting_196797	ENST00000465637.4	chr2_85547994_-	-177.40	-177.10	-198.40
CAediting_196798	ENST00000465637.4	chr2_85547995_-	-177.10	-177.10	-198.40
CAediting_196882	ENST00000473665.1	chr2_85554508_-	-298.50	-299.20	-298.50

Top

Relation with ADAR for GGCX

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_196716	chr2_85546198_-	0.0181875377333927	0.106662139122317	.	.	.	.
LIHC	CAediting_196716	chr2_85546198_-	0.0198761029605233	0.137404601411613	.	.	.	.
LUAD	CAediting_196716	chr2_85546198_-	0.00190763703120674	0.175086692930105	.	.	.	.
LUSC	CAediting_196716	chr2_85546198_-	0.0152065601876022	0.186467971429619	.	.	.	.
KIRP	CAediting_196716	chr2_85546198_-	.	.	.	.	0.0423452403481419	0.226151510908574
OV	CAediting_196716	chr2_85546198_-	0.000732617589754414	0.203925288462745	.	.	.	.
SKCM	CAediting_196716	chr2_85546198_-	0.0234986532497802	0.194181363494388	0.0433624185117539	0.173516159721876	.	.
SARC	CAediting_196716	chr2_85546198_-	0.0411652842530613	0.180760458417991	.	.	.	.
LIHC	CAediting_196717	chr2_85546204_-	0.00161141423666623	0.191756401212251	.	.	.	.
LUAD	CAediting_196717	chr2_85546204_-	0.000148988471665681	0.249667368511457	.	.	.	.
HNSC	CAediting_196717	chr2_85546204_-	.	.	0.00758076954540959	0.373305773025736	.	.
SKCM	CAediting_196717	chr2_85546204_-	0.0251954775606025	0.233327582189679	.	.	.	.
BLCA	CAediting_196721	chr2_85546245_-	0.00158015489648282	0.209002795746621	.	.	.	.
LGG	CAediting_196721	chr2_85546245_-	.	.	.	.	0.00139597678280203	0.19496223142798
BRCA	CAediting_196721	chr2_85546245_-	5.74898759794886e-09	0.209391556518325	.	.	.	.
LIHC	CAediting_196721	chr2_85546245_-	7.48994531041489e-07	0.262294657520308	.	.	.	.
CESC	CAediting_196721	chr2_85546245_-	0.00699766478254622	0.199821689259743	.	.	.	.
LUAD	CAediting_196721	chr2_85546245_-	0.000516544046808249	0.166747708162079	.	.	.	.
LUSC	CAediting_196721	chr2_85546245_-	0.000188706920287887	0.202928697329088	.	.	.	.
GBM	CAediting_196721	chr2_85546245_-	0.0191816344893624	0.223026649904691	.	.	.	.
PRAD	CAediting_196721	chr2_85546245_-	0.0316999931605612	0.117752121750807	.	.	.	.
HNSC	CAediting_196721	chr2_85546245_-	.	.	0.00969054753846231	0.184355660818899	.	.
UCEC	CAediting_196721	chr2_85546245_-	0.00583184988400558	0.324077591555139	.	.	.	.
KIRP	CAediting_196721	chr2_85546245_-	0.0383349547211028	0.161907541085565	.	.	.	.
OV	CAediting_196721	chr2_85546245_-	0.000613376035198715	0.194435042858903	.	.	.	.
SKCM	CAediting_196721	chr2_85546245_-	1.70133338524275e-08	0.324699490786936	.	.	.	.
SARC	CAediting_196721	chr2_85546245_-	0.0496398344382468	0.143005135268678	0.0324003952425377	0.155703601278772	.	.
TGCT	CAediting_196721	chr2_85546245_-	0.00308098250402464	0.353771955934444	.	.	.	.
BLCA	CAediting_196722	chr2_85546253_-	0.0201885556662342	0.180169689714006	.	.	.	.
LGG	CAediting_196722	chr2_85546253_-	.	.	.	.	0.00491980721851892	0.213509719807159
BRCA	CAediting_196722	chr2_85546253_-	0.000497979042189541	0.138765884802249	.	.	.	.
LIHC	CAediting_196722	chr2_85546253_-	0.0161024006931216	0.131602704554287	.	.	.	.
LUAD	CAediting_196722	chr2_85546253_-	0.000799197823054042	0.170413071989286	.	.	.	.
LUSC	CAediting_196722	chr2_85546253_-	3.87014763545704e-06	0.2768293532972	.	.	.	.
OV	CAediting_196722	chr2_85546253_-	0.00968080367134544	0.148901134565931	.	.	.	.
SKCM	CAediting_196722	chr2_85546253_-	0.00050792371922897	0.228443244698933	.	.	.	.
TGCT	CAediting_196722	chr2_85546253_-	0.00497517397896921	0.370232490803017	.	.	.	.
BLCA	CAediting_196724	chr2_85546270_-	0.0373920488513494	0.278891567364321	.	.	.	.
BRCA	CAediting_196724	chr2_85546270_-	0.017670236505	0.133392779343552	.	.	.	.
LIHC	CAediting_196724	chr2_85546270_-	0.00584203918335427	0.170519813605176	.	.	.	.
LUSC	CAediting_196724	chr2_85546270_-	.	.	.	.	0.0270241400609996	0.226897308329766
STAD	CAediting_196724	chr2_85546270_-	.	.	0.0241341600321337	0.197728258860884	.	.
SKCM	CAediting_196724	chr2_85546270_-	.	.	0.0128230307401854	0.261402111715918	.	.
BRCA	CAediting_196725	chr2_85546276_-	.	.	.	.	0.00566349172475682	0.355925676913613
BRCA	CAediting_196732	chr2_85546360_-	0.00927917367473502	0.154403581286507	.	.	.	.
LIHC	CAediting_196732	chr2_85546360_-	0.00234945273578747	0.208360143530486	.	.	.	.
LUAD	CAediting_196732	chr2_85546360_-	0.00027709048153911	0.28202068113422	.	.	.	.
BRCA	CAediting_196737	chr2_85546401_-	4.49936045154264e-11	0.393761088634894	.	.	.	.
LIHC	CAediting_196737	chr2_85546401_-	7.79389957588633e-05	0.25915090768845	.	.	.	.
LUAD	CAediting_196737	chr2_85546401_-	5.10770010117149e-09	0.432951801650753	.	.	.	.
STAD	CAediting_196737	chr2_85546401_-	0.00054237804512507	0.45138011917042	.	.	.	.
BLCA	CAediting_196745	chr2_85546472_-	.	.	.	.	0.00197206725968195	0.329144880420766
BRCA	CAediting_196745	chr2_85546472_-	0.000626985452400129	0.184273495126397	.	.	.	.
LUAD	CAediting_196745	chr2_85546472_-	0.000886422037084044	0.210217698035444	.	.	.	.
SKCM	CAediting_196745	chr2_85546472_-	0.0191990659332443	0.218106241334218	.	.	.	.
BRCA	CAediting_196746	chr2_85546473_-	0.003163988020039	0.178990520101854	.	.	.	.
LIHC	CAediting_196746	chr2_85546473_-	0.021146650465743	0.147534349765625	.	.	.	.
CESC	CAediting_196746	chr2_85546473_-	.	.	0.00430130179184358	0.397079920509788	.	.
LUAD	CAediting_196746	chr2_85546473_-	9.60327148683132e-05	0.272277825662294	.	.	.	.
STAD	CAediting_196746	chr2_85546473_-	0.0373435205059314	0.202521339275901	.	.	.	.
LUAD	CAediting_196748	chr2_85546491_-	6.83932415569631e-05	0.300518354514112	.	.	.	.
BRCA	CAediting_196749	chr2_85546495_-	0.0245909842545362	0.12506259425746	.	.	.	.
LUAD	CAediting_196749	chr2_85546495_-	0.000690151159482105	0.237988714049538	.	.	.	.
KIRC	CAediting_196749	chr2_85546495_-	.	.	.	.	0.0128527255136612	0.162769802230282
SKCM	CAediting_196749	chr2_85546495_-	0.0342134468079401	0.216388220644206	.	.	.	.
BRCA	CAediting_196750	chr2_85546500_-	4.3334609498039e-06	0.195896695755076	.	.	.	.
LUAD	CAediting_196750	chr2_85546500_-	3.37736998015993e-06	0.24175031679477	.	.	.	.
HNSC	CAediting_196750	chr2_85546500_-	0.000245252264986142	0.288721094827324	0.0135190649797311	0.196752687240643	.	.
SKCM	CAediting_196750	chr2_85546500_-	0.00526613453666952	0.188370274438656	.	.	.	.
LUAD	CAediting_196754	chr2_85546513_-	4.00206836304261e-06	0.330778196589615	.	.	.	.
BRCA	CAediting_196761	chr2_85546566_-	0.00350838943113465	0.219551369422125	.	.	.	.
KIRP	CAediting_196768	chr2_85546588_-	0.0118953745239691	0.271685653023594	.	.	.	.
KIRP	CAediting_196770	chr2_85546598_-	0.0196121943630177	0.260491876344246	.	.	.	.
BRCA	CAediting_196780	chr2_85546697_-	0.00169459384286444	0.141029369525758	.	.	.	.
LIHC	CAediting_196780	chr2_85546697_-	2.76191969598996e-05	0.241887469702585	.	.	.	.
LUAD	CAediting_196780	chr2_85546697_-	1.27712909699689e-07	0.299196920839525	.	.	.	.
SKCM	CAediting_196780	chr2_85546697_-	0.00019123810244381	0.28817572726831	.	.	.	.
SARC	CAediting_196780	chr2_85546697_-	0.0465105965312111	0.196632761095046	.	.	.	.
LUAD	CAediting_196788	chr2_85547954_-	0.018639135216591	0.271107546514917	.	.	.	.
MESO	CAediting_196798	chr2_85547995_-	.	.	0.0489406959984054	0.271842548028963	.	.
CESC	CAediting_196805	chr2_85548049_-	.	.	0.0384633650853067	0.293664476962206	.	.
ESCA	CAediting_196805	chr2_85548049_-	.	.	.	.	0.0307618463077987	0.211967848483752
KIRC	CAediting_196810	chr2_85548075_-	.	.	.	.	0.00927913423378376	0.169384472794175
ESCA	CAediting_196812	chr2_85548085_-	.	.	0.0412746680346123	0.255874424905154	.	.
HNSC	CAediting_196817	chr2_85548113_-	.	.	0.0133357755692481	0.189474271780139	.	.
BLCA	CAediting_196848	chr2_85549498_-	0.0225227338397598	0.162087129077435	0.0026498582982547	0.212504916638297	.	.
LGG	CAediting_196848	chr2_85549498_-	.	.	.	.	0.0236804128872759	0.100464828757954
BRCA	CAediting_196848	chr2_85549498_-	6.33242834078591e-06	0.153183480340464	0.00170317429588076	0.106779554422769	.	.
LIHC	CAediting_196848	chr2_85549498_-	0.0461056601668825	0.129689852715622	.	.	.	.
LUAD	CAediting_196848	chr2_85549498_-	.	.	0.0145318864742821	0.12713590877147	.	.
COAD	CAediting_196848	chr2_85549498_-	.	.	.	.	0.0377207729918222	0.174573159503166
LUSC	CAediting_196848	chr2_85549498_-	0.036263513824963	0.110102101602748	.	.	.	.
GBM	CAediting_196848	chr2_85549498_-	0.0274468211681625	0.183157137035013	.	.	.	.
PRAD	CAediting_196848	chr2_85549498_-	1.46537203046225e-08	0.295419414053865	0.0283348315475354	0.116551176800149	.	.
HNSC	CAediting_196848	chr2_85549498_-	.	.	.	.	1.00330436704386e-08	0.315335737803829
STAD	CAediting_196848	chr2_85549498_-	.	.	3.57661388466896e-05	0.254799258798297	.	.
THCA	CAediting_196848	chr2_85549498_-	1.01235205980623e-10	0.309709138265482	.	.	0.0196977006479041	0.114170375850291
KIRC	CAediting_196848	chr2_85549498_-	1.43014649222654e-08	0.259664025068678	0.012638751914345	0.115819034528505	.	.
UCEC	CAediting_196848	chr2_85549498_-	.	.	.	.	0.0149290326507684	0.148554538539994
KIRP	CAediting_196848	chr2_85549498_-	0.00311516076834576	0.21857921342981	.	.	.	.
ESCA	CAediting_196848	chr2_85549498_-	1.50236712476871e-05	0.355685422417616	.	.	.	.
OV	CAediting_196848	chr2_85549498_-	.	.	.	.	0.0324228056761498	0.119063876855508
PAAD	CAediting_196848	chr2_85549498_-	0.0172997410546576	0.226578691061337	.	.	.	.
PCPG	CAediting_196848	chr2_85549498_-	.	.	.	.	0.00851543694990248	0.245334043186407
SKCM	CAediting_196848	chr2_85549498_-	.	.	0.0358918708211919	0.115550683023294	0.00205381196742718	0.169095289775362
MESO	CAediting_196848	chr2_85549498_-	.	.	.	.	0.0140622072900751	0.315519031067247
SARC	CAediting_196848	chr2_85549498_-	.	.	.	.	0.0185863710918371	0.167574774007998
TGCT	CAediting_196848	chr2_85549498_-	.	.	0.00753576943809866	0.264433801885329	.	.
THYM	CAediting_196848	chr2_85549498_-	.	.	0.0114240095434916	0.294535040073485	.	.
LGG	CAediting_196849	chr2_85549499_-	.	.	.	.	0.0484974444239828	0.106152522800783
BRCA	CAediting_196849	chr2_85549499_-	0.0292425381275582	0.108484898640007	.	.	.	.
LUAD	CAediting_196849	chr2_85549499_-	.	.	0.000185893066207975	0.312969251968944	.	.
PRAD	CAediting_196849	chr2_85549499_-	0.0224558418602751	0.202444756319137	.	.	.	.
HNSC	CAediting_196849	chr2_85549499_-	.	.	.	.	1.58998783237256e-05	0.384380132557327
STAD	CAediting_196849	chr2_85549499_-	.	.	0.00153022922290704	0.267260330505385	.	.
THCA	CAediting_196849	chr2_85549499_-	0.0014354175893109	0.242592445308298	.	.	.	.
KIRC	CAediting_196849	chr2_85549499_-	0.0352755972838399	0.122834590741044	.	.	.	.
KIRP	CAediting_196849	chr2_85549499_-	0.0201278618741988	0.294556272837146	.	.	.	.
STAD	CAediting_196865	chr2_85549554_-	.	.	.	.	0.036278602419601	0.296903045872859

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Relation with cancer stages for GGCX

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_196721	chr2_85546245_-	0.0358380218416024	0.140007292909727
BLCA	pathologic_stage	CAediting_196724	chr2_85546270_-	0.015992782372665	0.323483745707329
BRCA	pathologic_stage	CAediting_196780	chr2_85546697_-	0.00876477838959715	0.119394532148363
BRCA	pathologic_stage	CAediting_196786	chr2_85547942_-	0.0023616833110269	0.365399171389726
BRCA	pathologic_stage	CAediting_196788	chr2_85547954_-	0.00930174037939533	0.246940891832488
CESC	clinical_stage	CAediting_196780	chr2_85546697_-	0.0374350942804046	-0.244076974165716
CESC	clinical_stage	CAediting_196800	chr2_85548013_-	0.0483810728517614	-0.199951642515592
ESCA	clinical_stage	CAediting_196716	chr2_85546198_-	0.0349056931763918	0.39308113773344
ESCA	clinical_stage	CAediting_196749	chr2_85546495_-	0.0028970943272213	0.604264283401303
ESCA	pathologic_stage	CAediting_196716	chr2_85546198_-	0.0445625475551317	0.209957887005749
HNSC	clinical_stage	CAediting_196749	chr2_85546495_-	0.0154477517736558	-0.275130593342073
HNSC	pathologic_stage	CAediting_196749	chr2_85546495_-	0.0494571731698628	-0.250610947314303
KIRC	pathologic_stage	CAediting_196721	chr2_85546245_-	0.00789321839267387	0.12125196667722
KIRC	pathologic_stage	CAediting_196737	chr2_85546401_-	0.000521210127459842	0.214941146834195
KIRC	pathologic_stage	CAediting_196745	chr2_85546472_-	0.00160935579510165	0.18766187302456
KIRC	pathologic_stage	CAediting_196746	chr2_85546473_-	0.0277094938296439	0.147107439439976
KIRC	pathologic_stage	CAediting_196748	chr2_85546491_-	0.000698263742825251	0.237188181401238
KIRC	pathologic_stage	CAediting_196749	chr2_85546495_-	0.0114259944713386	0.165807322159789
KIRC	pathologic_stage	CAediting_196754	chr2_85546513_-	0.00107557376455098	0.220015410695172
KIRC	pathologic_stage	CAediting_196770	chr2_85546598_-	0.0387864080911126	0.112626554975538
KIRC	pathologic_stage	CAediting_196780	chr2_85546697_-	0.0452561638919409	0.107875105240949
KIRC	pathologic_stage	CAediting_196788	chr2_85547954_-	0.0048027671477497	0.345631381903035
KIRC	pathologic_stage	CAediting_196798	chr2_85547995_-	0.043201809780996	0.102042669623929
KIRC	pathologic_stage	CAediting_196800	chr2_85548013_-	0.0026047981460803	0.202047693126489
KIRC	pathologic_stage	CAediting_196805	chr2_85548049_-	0.00510865976351504	0.217033030894007
KIRC	pathologic_stage	CAediting_196810	chr2_85548075_-	0.0243371872407273	0.147187976546867
KIRC	pathologic_stage	CAediting_196817	chr2_85548113_-	0.0302697010515896	0.115174373984306
KIRC	pathologic_stage	CAediting_196848	chr2_85549498_-	0.0220248222074175	-0.106638352892248
KIRP	clinical_stage	CAediting_196770	chr2_85546598_-	0.0407654578976232	0.279379267601195
KIRP	pathologic_stage	CAediting_196750	chr2_85546500_-	0.00279844210037325	0.320360911868571
KIRP	pathologic_stage	CAediting_196768	chr2_85546588_-	0.00423108425805072	0.324557111818777
LIHC	pathologic_stage	CAediting_196766	chr2_85546585_-	0.0303814164068867	0.138363617490602
LIHC	pathologic_stage	CAediting_196796	chr2_85547993_-	0.03804884648903	-0.257922483862017
LIHC	pathologic_stage	CAediting_196848	chr2_85549498_-	0.0454754791945554	0.134093335728673
LUAD	pathologic_stage	CAediting_196721	chr2_85546245_-	0.0157663041105703	0.117189543942808
LUAD	pathologic_stage	CAediting_196780	chr2_85546697_-	0.0155589164956707	0.140741294031292
LUAD	pathologic_stage	CAediting_196812	chr2_85548085_-	0.0114654718842516	0.2470393559719
LUAD	pathologic_stage	CAediting_196849	chr2_85549499_-	0.0482738494778427	0.170316352815896
LUSC	pathologic_stage	CAediting_196852	chr2_85549525_-	0.026705721449005	0.190724463884926
OV	clinical_stage	CAediting_196716	chr2_85546198_-	0.0224374775748483	0.13915972514498
OV	clinical_stage	CAediting_196725	chr2_85546276_-	0.0200068424624267	0.254966928027221
OV	clinical_stage	CAediting_196813	chr2_85548089_-	0.0167595773047476	0.283063278909667
STAD	pathologic_stage	CAediting_196724	chr2_85546270_-	0.048444545121872	0.179064146466405
THCA	pathologic_stage	CAediting_196716	chr2_85546198_-	0.0105103062413134	0.154912016960383
THCA	pathologic_stage	CAediting_196721	chr2_85546245_-	0.0356913911967367	0.103642862996631
THCA	pathologic_stage	CAediting_196722	chr2_85546253_-	0.0139563833696762	0.131682654257407
THCA	pathologic_stage	CAediting_196745	chr2_85546472_-	0.0255446077772621	0.191475851545455

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Relation with survival for GGCX

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_196750	chr2_85546500_-	0.033638647372614	0.029302	0.00833743
LGG	CAediting_196766	chr2_85546585_-	0.0263545097422382	8.56914e-05	0.000658171
LGG	CAediting_196848	chr2_85549498_-	0.00964050464950872	0.00431807	0.0521307
BRCA	CAediting_196724	chr2_85546270_-	0.0114148029920871	0.0207914	12.8889
BRCA	CAediting_196800	chr2_85548013_-	0.0407811520424468	0.0460833	0.10943
LIHC	CAediting_196744	chr2_85546460_-	0.000417866637657083	0.0381706	4340.29
LIHC	CAediting_196770	chr2_85546598_-	0.0370670407324918	0.0422394	4.8677
LUAD	CAediting_196780	chr2_85546697_-	0.000154607643521265	0.0438266	5.7581
LUAD	CAediting_196824	chr2_85548151_-	0.0113402328963789	0.00388524	42786
LUSC	CAediting_196810	chr2_85548075_-	0.027197757801928	0.0222923	11.7346
HNSC	CAediting_196848	chr2_85549498_-	0.0398755777825781	0.00591763	0.0208151
STAD	CAediting_196748	chr2_85546491_-	0.0166348692292109	0.0219101	24.6459
STAD	CAediting_196761	chr2_85546566_-	0.0289721078839601	0.0151521	65.3805
ESCA	CAediting_196812	chr2_85548085_-	0.00664244292257721	0.0179271	5515.12

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RelatedDrugs for GGCX

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
GGCX	P38435	DB00036	Coagulation factor VIIa Recombinant Human	Vitamin K-dependent gamma-carboxylase	BiotechDrug	approved
GGCX	P38435	DB01125	Anisindione	Vitamin K-dependent gamma-carboxylase	SmallMoleculeDrug	approved
GGCX	P38435	DB09332	Kappadione	Vitamin K-dependent gamma-carboxylase	SmallMoleculeDrug	approved
GGCX	P38435	DB13152	Coagulation Factor IX Human	Vitamin K-dependent gamma-carboxylase	BiotechDrug	approved
GGCX	P38435	DB00100	Coagulation Factor IX (Recombinant)	Vitamin K-dependent gamma-carboxylase	BiotechDrug	approved\|investigational
GGCX	P38435	DB01022	Phylloquinone	Vitamin K-dependent gamma-carboxylase	SmallMoleculeDrug	approved\|investigational
GGCX	P38435	DB00142	Glutamic acid	Vitamin K-dependent gamma-carboxylase	SmallMoleculeDrug	approved\|nutraceutical
GGCX	P38435	DB00170	Menadione	Vitamin K-dependent gamma-carboxylase	SmallMoleculeDrug	approved\|nutraceutical

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RelatedDiseases for GGCX

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
GGCX	C1848534	VITAMIN K-DEPENDENT CLOTTING FACTORS, COMBINED DEFICIENCY OF, 1	6	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
GGCX	C1835813	Pseudoxanthoma Elasticum-Like Disorder with Multiple Coagulation Factor Deficiency	2	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
GGCX	C0005779	Blood Coagulation Disorders	1	CTD_human
GGCX	C0451641	Urolithiasis	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene