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Editing gene: AATF (CAeditome ID:26574)

Gene summary for AATF

Gene summary

Gene information	Gene symbol	AATF
	Gene ID	26574
	Gene name	apoptosis antagonizing transcription factor
	Synonyms	BFR2\|CHE-1\|CHE1\|DED
	Cytomap	17q12
	Type of gene	protein-coding
	Description	protein AATFrb-binding protein Che-1
	Modification date	20210518
	UniProtAcc	Q9NY61
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
AATF	GO:0032929	Protein AATF	15207272
AATF	GO:0045944	Protein AATF	18049476
AATF	GO:2000378	Protein AATF	15207272
AATF	GO:0005634	Protein AATF	10580117
AATF	GO:0005634	Protein AATF	12429849
AATF	GO:0005634	Protein AATF	14627703
AATF	GO:0005634	Protein AATF	15207272
AATF	GO:0005654	Protein AATF	0000052
AATF	GO:0005730	Protein AATF	0000052
AATF	GO:0005737	Protein AATF	14627703
AATF	GO:0005737	Protein AATF	15207272

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RNA A-to-I events for AATF

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000275700.3

RNA A-to-I editing events in Cancer.

CAediting_1185385(36954118, +), CAediting_1185386(36954121, +), CAediting_1185387(36954137, +), CAediting_1185388(36954142, +), CAediting_1185389(36954147, +), CAediting_1185390(36954202, +), CAediting_1185391(36954214, +), CAediting_1185392(36954217, +), CAediting_1185393(36954224, +), CAediting_1185394(36954271, +), CAediting_1185395(36954302, +), CAediting_1185396(36954316, +), CAediting_1185397(36954317, +), CAediting_1185398(36954320, +), CAediting_1185399(36954329, +), CAediting_1185400(36955786, +), CAediting_1185401(36955821, +), CAediting_1185402(36955862, +), CAediting_1185403(36955863, +), CAediting_1185404(36955880, +), CAediting_1185405(36955892, +), CAediting_1185406(36955902, +), CAediting_1185407(36955904, +), CAediting_1185408(36955949, +), CAediting_1185409(36955952, +), CAediting_1185410(36956016, +), CAediting_1185411(36956027, +), CAediting_1185412(36956028, +), CAediting_1185413(36956418, +), CAediting_1185414(36956530, +), CAediting_1185415(36956552, +), CAediting_1185416(36956553, +), CAediting_1185417(36956681, +), CAediting_1185418(36956721, +), CAediting_1185419(36956744, +), CAediting_1185420(36956748, +), CAediting_1185421(36956762, +), CAediting_1185422(36956768, +), CAediting_1185423(36956776, +), CAediting_1185424(36956786, +), CAediting_1185425(36956800, +), CAediting_1185426(36956818, +), CAediting_1185427(36956838, +), CAediting_1185428(36956846, +), CAediting_1185429(36956848, +), CAediting_1185430(36956850, +), CAediting_1185431(36956856, +), CAediting_1185432(36956862, +), CAediting_1185433(36956866, +), CAediting_1185434(36956873, +), CAediting_1185435(36956879, +), CAediting_1185436(36956883, +), CAediting_1185437(36956892, +), CAediting_1185438(36956909, +), CAediting_1185439(36956910, +), CAediting_1185440(36956926, +), CAediting_1185441(36956936, +), CAediting_1185442(36956946, +), CAediting_1185443(36958242, +), CAediting_1185444(36958256, +), CAediting_1185445(36958302, +), CAediting_1185446(36958304, +), CAediting_1185447(36958350, +), CAediting_1185448(36958408, +), CAediting_1185449(36958412, +), CAediting_1185450(36958427, +), CAediting_1185451(36958890, +), CAediting_1185452(36958935, +), CAediting_1185453(36958949, +), CAediting_1185454(36958955, +), CAediting_1185455(36958964, +), CAediting_1185456(36958980, +), CAediting_1185457(36958999, +), CAediting_1185458(36959019, +), CAediting_1185459(36959025, +), CAediting_1185460(36959026, +), CAediting_1185461(36959055, +), CAediting_1185462(36959064, +), CAediting_1185463(36959243, +), CAediting_1185464(36959262, +), CAediting_1185465(36959322, +), CAediting_1185466(36959323, +), CAediting_1185467(36959355, +), CAediting_1185468(36959368, +), CAediting_1185469(36959375, +), CAediting_1185470(36959382, +), CAediting_1185471(36959395, +), CAediting_1185472(36960093, +), CAediting_1185473(36960155, +), CAediting_1185474(36960216, +), CAediting_1185475(36960274, +), CAediting_1185476(36960286, +), CAediting_1185477(36962866, +), CAediting_1185478(36963913, +), CAediting_1185479(36964457, +), CAediting_1185480(36966813, +), CAediting_1185481(36970185, +), CAediting_1185482(36970192, +), CAediting_1185483(36970204, +), CAediting_1185484(36970205, +), CAediting_1185485(36970214, +), CAediting_1185486(36971421, +), CAediting_1185487(36971431, +), CAediting_1185488(36971438, +), CAediting_1185489(36971443, +), CAediting_1185490(36971444, +), CAediting_1185491(36971458, +), CAediting_1185492(36971467, +), CAediting_1185493(36971473, +), CAediting_1185494(36971478, +), CAediting_1185495(36971479, +), CAediting_1185496(36971480, +), CAediting_1185497(36971482, +), CAediting_1185498(36971485, +), CAediting_1185499(36971487, +), CAediting_1185500(36971499, +), CAediting_1185501(36971524, +), CAediting_1185502(36971529, +), CAediting_1185503(36971530, +), CAediting_1185504(36971546, +), CAediting_1185505(36971652, +), CAediting_1185506(36971759, +), CAediting_1185507(36971765, +), CAediting_1185508(36971773, +), CAediting_1185509(36971775, +), CAediting_1185510(36971778, +), CAediting_1185511(36971874, +), CAediting_1185512(36973854, +), CAediting_1185513(36973950, +), CAediting_1185514(36973990, +), CAediting_1185515(36987019, +), CAediting_1185516(36987088, +), CAediting_1185517(36988244, +), CAediting_1185518(36995637, +), CAediting_1185519(36995697, +), CAediting_1185520(36995717, +), CAediting_1185521(36995820, +), CAediting_1185522(36996176, +), CAediting_1185523(36996177, +), CAediting_1185524(36996245, +), CAediting_1185525(36996246, +), CAediting_1185526(36996292, +), CAediting_1185527(36996304, +), CAediting_1185528(36996314, +), CAediting_1185529(36996315, +), CAediting_1185530(36996324, +), CAediting_1185531(36996369, +), CAediting_1185532(36996379, +), CAediting_1185533(36996384, +), CAediting_1185534(36996386, +), CAediting_1185535(36996397, +), CAediting_1185536(36996399, +), CAediting_1185537(37001085, +), CAediting_1185538(37001104, +), CAediting_1185539(37001109, +), CAediting_1185540(37001128, +), CAediting_1185541(37001156, +), CAediting_1185542(37001160, +), CAediting_1185543(37001167, +), CAediting_1185544(37001176, +), CAediting_1185545(37001198, +), CAediting_1185546(37001212, +), CAediting_1185547(37002043, +), CAediting_1185548(37002044, +), CAediting_1185549(37002049, +), CAediting_1185550(37003567, +), CAediting_1185551(37003579, +), CAediting_1185552(37003584, +), CAediting_1185553(37003839, +), CAediting_1185554(37003841, +), CAediting_1185555(37003918, +), CAediting_1185556(37003928, +), CAediting_1185557(37003939, +), CAediting_1185558(37004011, +), CAediting_1185559(37004210, +), CAediting_1185560(37005903, +), CAediting_1185561(37005921, +), CAediting_1185562(37005933, +), CAediting_1185563(37006020, +), CAediting_1185564(37006028, +), CAediting_1185565(37006349, +), CAediting_1185566(37007207, +), CAediting_1185567(37007208, +), CAediting_1185568(37007209, +), CAediting_1185569(37007211, +), CAediting_1185570(37007313, +), CAediting_1185571(37007317, +), CAediting_1185572(37007321, +), CAediting_1185573(37007466, +), CAediting_1185574(37007478, +), CAediting_1185575(37008639, +), CAediting_1185576(37008662, +), CAediting_1185577(37008663, +), CAediting_1185578(37008682, +), CAediting_1185579(37008718, +), CAediting_1185580(37008738, +), CAediting_1185581(37008752, +), CAediting_1185582(37009261, +), CAediting_1185583(37010337, +), CAediting_1185584(37011156, +), CAediting_1185585(37012321, +), CAediting_1185586(37023867, +), CAediting_1185587(37023891, +), CAediting_1185588(37023893, +), CAediting_1185589(37023896, +), CAediting_1185590(37023897, +), CAediting_1185591(37023905, +), CAediting_1185592(37023908, +), CAediting_1185593(37023916, +), CAediting_1185594(37023918, +), CAediting_1185595(37023946, +), CAediting_1185596(37023947, +), CAediting_1185597(37023956, +), CAediting_1185598(37023974, +), CAediting_1185599(37023982, +), CAediting_1185600(37028156, +), CAediting_1185601(37028175, +), CAediting_1185602(37028275, +), CAediting_1185603(37028354, +), CAediting_1185604(37028416, +), CAediting_1185605(37028428, +), CAediting_1185606(37028585, +), CAediting_1185607(37028621, +), CAediting_1185608(37028626, +), CAediting_1185609(37028665, +), CAediting_1185610(37028679, +), CAediting_1185611(37028707, +), CAediting_1185612(37029344, +), CAediting_1185613(37029510, +), CAediting_1185614(37029588, +), CAediting_1185615(37029589, +), CAediting_1185616(37029592, +), CAediting_1185617(37029593, +), CAediting_1185618(37029594, +), CAediting_1185619(37029629, +), CAediting_1185620(37029711, +), CAediting_1185621(37030125, +), CAediting_1185622(37030139, +), CAediting_1185623(37030173, +), CAediting_1185624(37030180, +), CAediting_1185625(37031263, +), CAediting_1185626(37031272, +), CAediting_1185627(37031280, +), CAediting_1185628(37031281, +), CAediting_1185629(37031305, +), CAediting_1185630(37031309, +), CAediting_1185631(37031331, +), CAediting_1185632(37031336, +), CAediting_1185633(37031338, +), CAediting_1185634(37031343, +), CAediting_1185635(37031344, +), CAediting_1185636(37031346, +), CAediting_1185637(37031359, +), CAediting_1185638(37031363, +), CAediting_1185639(37031364, +), CAediting_1185640(37034836, +), CAediting_1185641(37034843, +), CAediting_1185642(37035004, +), CAediting_1185643(37035238, +), CAediting_1185644(37035632, +), CAediting_1185645(37035709, +), CAediting_1185646(37035715, +), CAediting_1185647(37053787, +),

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RNA editing positional annotations for AATF using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1185385	chr17_36954118_+	intronic
CAediting_1185386	chr17_36954121_+	intronic
CAediting_1185387	chr17_36954137_+	intronic
CAediting_1185388	chr17_36954142_+	intronic
CAediting_1185389	chr17_36954147_+	intronic
CAediting_1185390	chr17_36954202_+	intronic
CAediting_1185391	chr17_36954214_+	intronic
CAediting_1185392	chr17_36954217_+	intronic
CAediting_1185393	chr17_36954224_+	intronic
CAediting_1185394	chr17_36954271_+	intronic
CAediting_1185395	chr17_36954302_+	intronic
CAediting_1185396	chr17_36954316_+	intronic
CAediting_1185397	chr17_36954317_+	intronic
CAediting_1185398	chr17_36954320_+	intronic
CAediting_1185399	chr17_36954329_+	intronic
CAediting_1185400	chr17_36955786_+	intronic
CAediting_1185401	chr17_36955821_+	intronic
CAediting_1185402	chr17_36955862_+	intronic
CAediting_1185403	chr17_36955863_+	intronic
CAediting_1185404	chr17_36955880_+	intronic
CAediting_1185405	chr17_36955892_+	intronic
CAediting_1185406	chr17_36955902_+	intronic
CAediting_1185407	chr17_36955904_+	intronic
CAediting_1185408	chr17_36955949_+	intronic
CAediting_1185409	chr17_36955952_+	intronic
CAediting_1185410	chr17_36956016_+	intronic
CAediting_1185411	chr17_36956027_+	intronic
CAediting_1185412	chr17_36956028_+	intronic
CAediting_1185413	chr17_36956418_+	intronic
CAediting_1185414	chr17_36956530_+	intronic
CAediting_1185415	chr17_36956552_+	intronic
CAediting_1185416	chr17_36956553_+	intronic
CAediting_1185417	chr17_36956681_+	intronic
CAediting_1185418	chr17_36956721_+	intronic
CAediting_1185419	chr17_36956744_+	intronic
CAediting_1185420	chr17_36956748_+	intronic
CAediting_1185421	chr17_36956762_+	intronic
CAediting_1185422	chr17_36956768_+	intronic
CAediting_1185423	chr17_36956776_+	intronic
CAediting_1185424	chr17_36956786_+	intronic
CAediting_1185425	chr17_36956800_+	intronic
CAediting_1185426	chr17_36956818_+	intronic
CAediting_1185427	chr17_36956838_+	intronic
CAediting_1185428	chr17_36956846_+	intronic
CAediting_1185429	chr17_36956848_+	intronic
CAediting_1185430	chr17_36956850_+	intronic
CAediting_1185431	chr17_36956856_+	intronic
CAediting_1185432	chr17_36956862_+	intronic
CAediting_1185433	chr17_36956866_+	intronic
CAediting_1185434	chr17_36956873_+	intronic
CAediting_1185435	chr17_36956879_+	intronic
CAediting_1185436	chr17_36956883_+	intronic
CAediting_1185437	chr17_36956892_+	intronic
CAediting_1185438	chr17_36956909_+	intronic
CAediting_1185439	chr17_36956910_+	intronic
CAediting_1185440	chr17_36956926_+	intronic
CAediting_1185441	chr17_36956936_+	intronic
CAediting_1185442	chr17_36956946_+	intronic
CAediting_1185443	chr17_36958242_+	intronic
CAediting_1185444	chr17_36958256_+	intronic
CAediting_1185445	chr17_36958302_+	intronic
CAediting_1185446	chr17_36958304_+	intronic
CAediting_1185447	chr17_36958350_+	intronic
CAediting_1185448	chr17_36958408_+	intronic
CAediting_1185449	chr17_36958412_+	intronic
CAediting_1185450	chr17_36958427_+	intronic
CAediting_1185451	chr17_36958890_+	intronic
CAediting_1185452	chr17_36958935_+	intronic
CAediting_1185453	chr17_36958949_+	intronic
CAediting_1185454	chr17_36958955_+	intronic
CAediting_1185455	chr17_36958964_+	intronic
CAediting_1185456	chr17_36958980_+	intronic
CAediting_1185457	chr17_36958999_+	intronic
CAediting_1185458	chr17_36959019_+	intronic
CAediting_1185459	chr17_36959025_+	intronic
CAediting_1185460	chr17_36959026_+	intronic
CAediting_1185461	chr17_36959055_+	intronic
CAediting_1185462	chr17_36959064_+	intronic
CAediting_1185463	chr17_36959243_+	intronic
CAediting_1185464	chr17_36959262_+	intronic
CAediting_1185465	chr17_36959322_+	intronic
CAediting_1185466	chr17_36959323_+	intronic
CAediting_1185467	chr17_36959355_+	intronic
CAediting_1185468	chr17_36959368_+	intronic
CAediting_1185469	chr17_36959375_+	intronic
CAediting_1185470	chr17_36959382_+	intronic
CAediting_1185471	chr17_36959395_+	intronic
CAediting_1185472	chr17_36960093_+	intronic
CAediting_1185473	chr17_36960155_+	intronic
CAediting_1185474	chr17_36960216_+	intronic
CAediting_1185475	chr17_36960274_+	intronic
CAediting_1185476	chr17_36960286_+	intronic
CAediting_1185477	chr17_36962866_+	intronic
CAediting_1185478	chr17_36963913_+	intronic
CAediting_1185479	chr17_36964457_+	intronic
CAediting_1185480	chr17_36966813_+	intronic
CAediting_1185481	chr17_36970185_+	intronic
CAediting_1185482	chr17_36970192_+	intronic
CAediting_1185483	chr17_36970204_+	intronic
CAediting_1185484	chr17_36970205_+	intronic
CAediting_1185485	chr17_36970214_+	intronic
CAediting_1185486	chr17_36971421_+	intronic
CAediting_1185487	chr17_36971431_+	intronic
CAediting_1185488	chr17_36971438_+	intronic
CAediting_1185489	chr17_36971443_+	intronic
CAediting_1185490	chr17_36971444_+	intronic
CAediting_1185491	chr17_36971458_+	intronic
CAediting_1185492	chr17_36971467_+	intronic
CAediting_1185493	chr17_36971473_+	intronic
CAediting_1185494	chr17_36971478_+	intronic
CAediting_1185495	chr17_36971479_+	intronic
CAediting_1185496	chr17_36971480_+	intronic
CAediting_1185497	chr17_36971482_+	intronic
CAediting_1185498	chr17_36971485_+	intronic
CAediting_1185499	chr17_36971487_+	intronic
CAediting_1185500	chr17_36971499_+	intronic
CAediting_1185501	chr17_36971524_+	intronic
CAediting_1185502	chr17_36971529_+	intronic
CAediting_1185503	chr17_36971530_+	intronic
CAediting_1185504	chr17_36971546_+	intronic
CAediting_1185505	chr17_36971652_+	intronic
CAediting_1185506	chr17_36971759_+	intronic
CAediting_1185507	chr17_36971765_+	intronic
CAediting_1185508	chr17_36971773_+	intronic
CAediting_1185509	chr17_36971775_+	intronic
CAediting_1185510	chr17_36971778_+	intronic
CAediting_1185511	chr17_36971874_+	intronic
CAediting_1185512	chr17_36973854_+	intronic
CAediting_1185513	chr17_36973950_+	intronic
CAediting_1185514	chr17_36973990_+	intronic
CAediting_1185515	chr17_36987019_+	intronic
CAediting_1185516	chr17_36987088_+	intronic
CAediting_1185517	chr17_36988244_+	intronic
CAediting_1185518	chr17_36995637_+	intronic
CAediting_1185519	chr17_36995697_+	intronic
CAediting_1185520	chr17_36995717_+	intronic
CAediting_1185521	chr17_36995820_+	intronic
CAediting_1185522	chr17_36996176_+	intronic
CAediting_1185523	chr17_36996177_+	intronic
CAediting_1185524	chr17_36996245_+	intronic
CAediting_1185525	chr17_36996246_+	intronic
CAediting_1185526	chr17_36996292_+	intronic
CAediting_1185527	chr17_36996304_+	intronic
CAediting_1185528	chr17_36996314_+	intronic
CAediting_1185529	chr17_36996315_+	intronic
CAediting_1185530	chr17_36996324_+	intronic
CAediting_1185531	chr17_36996369_+	intronic
CAediting_1185532	chr17_36996379_+	intronic
CAediting_1185533	chr17_36996384_+	intronic
CAediting_1185534	chr17_36996386_+	intronic
CAediting_1185535	chr17_36996397_+	intronic
CAediting_1185536	chr17_36996399_+	intronic
CAediting_1185537	chr17_37001085_+	intronic
CAediting_1185538	chr17_37001104_+	intronic
CAediting_1185539	chr17_37001109_+	intronic
CAediting_1185540	chr17_37001128_+	intronic
CAediting_1185541	chr17_37001156_+	intronic
CAediting_1185542	chr17_37001160_+	intronic
CAediting_1185543	chr17_37001167_+	intronic
CAediting_1185544	chr17_37001176_+	intronic
CAediting_1185545	chr17_37001198_+	intronic
CAediting_1185546	chr17_37001212_+	intronic
CAediting_1185547	chr17_37002043_+	intronic
CAediting_1185548	chr17_37002044_+	intronic
CAediting_1185549	chr17_37002049_+	intronic
CAediting_1185550	chr17_37003567_+	intronic
CAediting_1185551	chr17_37003579_+	intronic
CAediting_1185552	chr17_37003584_+	intronic
CAediting_1185553	chr17_37003839_+	intronic
CAediting_1185554	chr17_37003841_+	intronic
CAediting_1185555	chr17_37003918_+	intronic
CAediting_1185556	chr17_37003928_+	intronic
CAediting_1185557	chr17_37003939_+	intronic
CAediting_1185558	chr17_37004011_+	intronic
CAediting_1185559	chr17_37004210_+	intronic
CAediting_1185560	chr17_37005903_+	intronic
CAediting_1185561	chr17_37005921_+	intronic
CAediting_1185562	chr17_37005933_+	intronic
CAediting_1185563	chr17_37006020_+	intronic
CAediting_1185564	chr17_37006028_+	intronic
CAediting_1185565	chr17_37006349_+	intronic
CAediting_1185566	chr17_37007207_+	intronic
CAediting_1185567	chr17_37007208_+	intronic
CAediting_1185568	chr17_37007209_+	intronic
CAediting_1185569	chr17_37007211_+	intronic
CAediting_1185570	chr17_37007313_+	intronic
CAediting_1185571	chr17_37007317_+	intronic
CAediting_1185572	chr17_37007321_+	intronic
CAediting_1185573	chr17_37007466_+	intronic
CAediting_1185574	chr17_37007478_+	intronic
CAediting_1185575	chr17_37008639_+	intronic
CAediting_1185576	chr17_37008662_+	intronic
CAediting_1185577	chr17_37008663_+	intronic
CAediting_1185578	chr17_37008682_+	intronic
CAediting_1185579	chr17_37008718_+	intronic
CAediting_1185580	chr17_37008738_+	intronic
CAediting_1185581	chr17_37008752_+	intronic
CAediting_1185582	chr17_37009261_+	intronic
CAediting_1185583	chr17_37010337_+	intronic
CAediting_1185584	chr17_37011156_+	intronic
CAediting_1185585	chr17_37012321_+	intronic
CAediting_1185586	chr17_37023867_+	ncRNA_intronic
CAediting_1185587	chr17_37023891_+	ncRNA_intronic
CAediting_1185588	chr17_37023893_+	ncRNA_intronic
CAediting_1185589	chr17_37023896_+	ncRNA_intronic
CAediting_1185590	chr17_37023897_+	ncRNA_intronic
CAediting_1185591	chr17_37023905_+	ncRNA_intronic
CAediting_1185592	chr17_37023908_+	ncRNA_intronic
CAediting_1185593	chr17_37023916_+	ncRNA_intronic
CAediting_1185594	chr17_37023918_+	ncRNA_intronic
CAediting_1185595	chr17_37023946_+	ncRNA_intronic
CAediting_1185596	chr17_37023947_+	ncRNA_intronic
CAediting_1185597	chr17_37023956_+	ncRNA_intronic
CAediting_1185598	chr17_37023974_+	ncRNA_intronic
CAediting_1185599	chr17_37023982_+	ncRNA_intronic
CAediting_1185600	chr17_37028156_+	ncRNA_intronic
CAediting_1185601	chr17_37028175_+	ncRNA_intronic
CAediting_1185602	chr17_37028275_+	ncRNA_intronic
CAediting_1185603	chr17_37028354_+	ncRNA_intronic
CAediting_1185604	chr17_37028416_+	ncRNA_intronic
CAediting_1185605	chr17_37028428_+	ncRNA_intronic
CAediting_1185606	chr17_37028585_+	ncRNA_intronic
CAediting_1185607	chr17_37028621_+	ncRNA_intronic
CAediting_1185608	chr17_37028626_+	ncRNA_intronic
CAediting_1185609	chr17_37028665_+	ncRNA_intronic
CAediting_1185610	chr17_37028679_+	ncRNA_intronic
CAediting_1185611	chr17_37028707_+	ncRNA_intronic
CAediting_1185612	chr17_37029344_+	ncRNA_intronic
CAediting_1185613	chr17_37029510_+	ncRNA_intronic
CAediting_1185614	chr17_37029588_+	ncRNA_intronic
CAediting_1185615	chr17_37029589_+	ncRNA_intronic
CAediting_1185616	chr17_37029592_+	ncRNA_intronic
CAediting_1185617	chr17_37029593_+	ncRNA_intronic
CAediting_1185618	chr17_37029594_+	ncRNA_intronic
CAediting_1185619	chr17_37029629_+	ncRNA_intronic
CAediting_1185620	chr17_37029711_+	ncRNA_intronic
CAediting_1185621	chr17_37030125_+	ncRNA_intronic
CAediting_1185622	chr17_37030139_+	ncRNA_intronic
CAediting_1185623	chr17_37030173_+	ncRNA_intronic
CAediting_1185624	chr17_37030180_+	ncRNA_intronic
CAediting_1185625	chr17_37031263_+	ncRNA_intronic
CAediting_1185626	chr17_37031272_+	ncRNA_intronic
CAediting_1185627	chr17_37031280_+	ncRNA_intronic
CAediting_1185628	chr17_37031281_+	ncRNA_intronic
CAediting_1185629	chr17_37031305_+	ncRNA_intronic
CAediting_1185630	chr17_37031309_+	ncRNA_intronic
CAediting_1185631	chr17_37031331_+	ncRNA_intronic
CAediting_1185632	chr17_37031336_+	ncRNA_intronic
CAediting_1185633	chr17_37031338_+	ncRNA_intronic
CAediting_1185634	chr17_37031343_+	ncRNA_intronic
CAediting_1185635	chr17_37031344_+	ncRNA_intronic
CAediting_1185636	chr17_37031346_+	ncRNA_intronic
CAediting_1185637	chr17_37031359_+	ncRNA_intronic
CAediting_1185638	chr17_37031363_+	ncRNA_intronic
CAediting_1185639	chr17_37031364_+	ncRNA_intronic
CAediting_1185640	chr17_37034836_+	ncRNA_exonic
CAediting_1185641	chr17_37034843_+	ncRNA_exonic
CAediting_1185642	chr17_37035004_+	ncRNA_intronic
CAediting_1185643	chr17_37035238_+	ncRNA_intronic
CAediting_1185644	chr17_37035632_+	ncRNA_intronic
CAediting_1185645	chr17_37035709_+	ncRNA_intronic
CAediting_1185646	chr17_37035715_+	ncRNA_intronic
CAediting_1185647	chr17_37053787_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1185385	chr17_36954118_+	SINE	Alu	AluJr
CAediting_1185386	chr17_36954121_+	SINE	Alu	AluJr
CAediting_1185387	chr17_36954137_+	SINE	Alu	AluJr
CAediting_1185388	chr17_36954142_+	SINE	Alu	AluJr
CAediting_1185389	chr17_36954147_+	SINE	Alu	AluJr
CAediting_1185390	chr17_36954202_+	SINE	Alu	AluJr
CAediting_1185391	chr17_36954214_+	SINE	Alu	AluJr
CAediting_1185392	chr17_36954217_+	SINE	Alu	AluJr
CAediting_1185393	chr17_36954224_+	SINE	Alu	AluJr
CAediting_1185394	chr17_36954271_+	SINE	Alu	AluJr
CAediting_1185395	chr17_36954302_+	SINE	Alu	AluJr
CAediting_1185396	chr17_36954316_+	SINE	Alu	AluJr
CAediting_1185397	chr17_36954317_+	SINE	Alu	AluJr
CAediting_1185398	chr17_36954320_+	SINE	Alu	AluJr
CAediting_1185399	chr17_36954329_+	SINE	Alu	AluJr
CAediting_1185400	chr17_36955786_+	SINE	Alu	AluJr
CAediting_1185401	chr17_36955821_+	SINE	Alu	AluJr
CAediting_1185402	chr17_36955862_+	SINE	Alu	AluJr
CAediting_1185403	chr17_36955863_+	SINE	Alu	AluJr
CAediting_1185404	chr17_36955880_+	SINE	Alu	AluJr
CAediting_1185405	chr17_36955892_+	SINE	Alu	AluJr
CAediting_1185406	chr17_36955902_+	SINE	Alu	AluJr
CAediting_1185407	chr17_36955904_+	SINE	Alu	AluJr
CAediting_1185408	chr17_36955949_+	SINE	Alu	AluJr
CAediting_1185409	chr17_36955952_+	SINE	Alu	AluJr
CAediting_1185410	chr17_36956016_+	SINE	Alu	AluJr
CAediting_1185411	chr17_36956027_+	SINE	Alu	AluJr
CAediting_1185412	chr17_36956028_+	SINE	Alu	AluJr
CAediting_1185413	chr17_36956418_+	SINE	Alu	AluSq2
CAediting_1185414	chr17_36956530_+	SINE	Alu	AluSq2
CAediting_1185415	chr17_36956552_+	SINE	Alu	AluSq2
CAediting_1185416	chr17_36956553_+	SINE	Alu	AluSq2
CAediting_1185417	chr17_36956681_+	SINE	Alu	AluSq2
CAediting_1185418	chr17_36956721_+	SINE	Alu	AluSq2
CAediting_1185419	chr17_36956744_+	SINE	Alu	AluSq2
CAediting_1185420	chr17_36956748_+	SINE	Alu	AluSq2
CAediting_1185421	chr17_36956762_+	SINE	Alu	AluSq2
CAediting_1185422	chr17_36956768_+	SINE	Alu	AluSq2
CAediting_1185423	chr17_36956776_+	SINE	Alu	AluSq2
CAediting_1185424	chr17_36956786_+	SINE	Alu	AluSq2
CAediting_1185425	chr17_36956800_+	SINE	Alu	AluSq2
CAediting_1185426	chr17_36956818_+	SINE	Alu	AluSq2
CAediting_1185427	chr17_36956838_+	SINE	Alu	AluSq2
CAediting_1185428	chr17_36956846_+	SINE	Alu	AluSq2
CAediting_1185429	chr17_36956848_+	SINE	Alu	AluSq2
CAediting_1185430	chr17_36956850_+	SINE	Alu	AluSq2
CAediting_1185431	chr17_36956856_+	SINE	Alu	AluSq2
CAediting_1185432	chr17_36956862_+	SINE	Alu	AluSq2
CAediting_1185433	chr17_36956866_+	SINE	Alu	AluSq2
CAediting_1185434	chr17_36956873_+	SINE	Alu	AluSq2
CAediting_1185435	chr17_36956879_+	SINE	Alu	AluSq2
CAediting_1185436	chr17_36956883_+	SINE	Alu	AluSq2
CAediting_1185437	chr17_36956892_+	SINE	Alu	AluSq2
CAediting_1185438	chr17_36956909_+	SINE	Alu	AluSq2
CAediting_1185439	chr17_36956910_+	SINE	Alu	AluSq2
CAediting_1185440	chr17_36956926_+	SINE	Alu	AluSq2
CAediting_1185441	chr17_36956936_+	SINE	Alu	AluSq2
CAediting_1185442	chr17_36956946_+	SINE	Alu	AluSq2
CAediting_1185443	chr17_36958242_+	SINE	Alu	AluSg
CAediting_1185444	chr17_36958256_+	SINE	Alu	AluSg
CAediting_1185445	chr17_36958302_+	SINE	Alu	AluSg
CAediting_1185446	chr17_36958304_+	SINE	Alu	AluSg
CAediting_1185447	chr17_36958350_+	SINE	Alu	AluSg
CAediting_1185448	chr17_36958408_+	SINE	Alu	AluSg
CAediting_1185449	chr17_36958412_+	SINE	Alu	AluSg
CAediting_1185450	chr17_36958427_+	SINE	Alu	AluSg
CAediting_1185451	chr17_36958890_+	SINE	Alu	AluSq
CAediting_1185452	chr17_36958935_+	SINE	Alu	AluSq
CAediting_1185453	chr17_36958949_+	SINE	Alu	AluSq
CAediting_1185454	chr17_36958955_+	SINE	Alu	AluSq
CAediting_1185455	chr17_36958964_+	SINE	Alu	AluSq
CAediting_1185456	chr17_36958980_+	SINE	Alu	AluSq
CAediting_1185457	chr17_36958999_+	SINE	Alu	AluSq
CAediting_1185458	chr17_36959019_+	SINE	Alu	AluSq
CAediting_1185459	chr17_36959025_+	SINE	Alu	AluSq
CAediting_1185460	chr17_36959026_+	SINE	Alu	AluSq
CAediting_1185461	chr17_36959055_+	SINE	Alu	AluSq
CAediting_1185462	chr17_36959064_+	SINE	Alu	AluSq
CAediting_1185463	chr17_36959243_+	SINE	Alu	AluSx1
CAediting_1185464	chr17_36959262_+	SINE	Alu	AluSx1
CAediting_1185465	chr17_36959322_+	SINE	Alu	AluSx1
CAediting_1185466	chr17_36959323_+	SINE	Alu	AluSx1
CAediting_1185467	chr17_36959355_+	SINE	Alu	AluSx1
CAediting_1185468	chr17_36959368_+	SINE	Alu	AluSx1
CAediting_1185469	chr17_36959375_+	SINE	Alu	AluSx1
CAediting_1185470	chr17_36959382_+	SINE	Alu	AluSx1
CAediting_1185471	chr17_36959395_+	SINE	Alu	AluSx1
CAediting_1185472	chr17_36960093_+	SINE	Alu	AluSz
CAediting_1185473	chr17_36960155_+	SINE	Alu	AluSz
CAediting_1185474	chr17_36960216_+	SINE	Alu	AluSz
CAediting_1185475	chr17_36960274_+	SINE	Alu	AluSz
CAediting_1185476	chr17_36960286_+	SINE	Alu	AluSz
CAediting_1185477	chr17_36962866_+	SINE	Alu	AluSq2
CAediting_1185478	chr17_36963913_+	SINE	Alu	AluJo
CAediting_1185479	chr17_36964457_+	SINE	Alu	AluSx1
CAediting_1185480	chr17_36966813_+	SINE	Alu	AluJb
CAediting_1185481	chr17_36970185_+	LINE	L1	L1ME1
CAediting_1185482	chr17_36970192_+	LINE	L1	L1ME1
CAediting_1185483	chr17_36970204_+	LINE	L1	L1ME1
CAediting_1185484	chr17_36970205_+	LINE	L1	L1ME1
CAediting_1185485	chr17_36970214_+	LINE	L1	L1ME1
CAediting_1185486	chr17_36971421_+	LINE	L1	L1ME1
CAediting_1185487	chr17_36971431_+	LINE	L1	L1ME1
CAediting_1185488	chr17_36971438_+	LINE	L1	L1ME1
CAediting_1185489	chr17_36971443_+	LINE	L1	L1ME1
CAediting_1185490	chr17_36971444_+	LINE	L1	L1ME1
CAediting_1185491	chr17_36971458_+	LINE	L1	L1ME1
CAediting_1185492	chr17_36971467_+	LINE	L1	L1ME1
CAediting_1185493	chr17_36971473_+	LINE	L1	L1ME1
CAediting_1185494	chr17_36971478_+	LINE	L1	L1ME1
CAediting_1185495	chr17_36971479_+	LINE	L1	L1ME1
CAediting_1185496	chr17_36971480_+	LINE	L1	L1ME1
CAediting_1185497	chr17_36971482_+	LINE	L1	L1ME1
CAediting_1185498	chr17_36971485_+	LINE	L1	L1ME1
CAediting_1185499	chr17_36971487_+	LINE	L1	L1ME1
CAediting_1185500	chr17_36971499_+	LINE	L1	L1ME1
CAediting_1185501	chr17_36971524_+	LINE	L1	L1ME1
CAediting_1185502	chr17_36971529_+	LINE	L1	L1ME1
CAediting_1185503	chr17_36971530_+	LINE	L1	L1ME1
CAediting_1185504	chr17_36971546_+	LINE	L1	L1ME1
CAediting_1185505	chr17_36971652_+	LINE	L1	L1ME1
CAediting_1185506	chr17_36971759_+	LINE	L1	L1ME1
CAediting_1185507	chr17_36971765_+	LINE	L1	L1ME1
CAediting_1185508	chr17_36971773_+	LINE	L1	L1ME1
CAediting_1185509	chr17_36971775_+	LINE	L1	L1ME1
CAediting_1185510	chr17_36971778_+	LINE	L1	L1ME1
CAediting_1185511	chr17_36971874_+	LINE	L1	L1ME1
CAediting_1185512	chr17_36973854_+	SINE	Alu	AluSz
CAediting_1185513	chr17_36973950_+	SINE	Alu	AluSz
CAediting_1185514	chr17_36973990_+	SINE	Alu	AluSz
CAediting_1185515	chr17_36987019_+	SINE	Alu	AluJo
CAediting_1185516	chr17_36987088_+	SINE	Alu	AluJo
CAediting_1185517	chr17_36988244_+	SINE	Alu	AluSz
CAediting_1185518	chr17_36995637_+	SINE	Alu	AluJr
CAediting_1185519	chr17_36995697_+	SINE	Alu	AluJr
CAediting_1185520	chr17_36995717_+	SINE	Alu	AluJr
CAediting_1185521	chr17_36995820_+	SINE	Alu	AluJr
CAediting_1185522	chr17_36996176_+	SINE	Alu	AluJb
CAediting_1185523	chr17_36996177_+	SINE	Alu	AluJb
CAediting_1185524	chr17_36996245_+	SINE	Alu	AluJb
CAediting_1185525	chr17_36996246_+	SINE	Alu	AluJb
CAediting_1185526	chr17_36996292_+	SINE	Alu	AluJb
CAediting_1185527	chr17_36996304_+	SINE	Alu	AluJb
CAediting_1185528	chr17_36996314_+	SINE	Alu	AluJb
CAediting_1185529	chr17_36996315_+	SINE	Alu	AluJb
CAediting_1185530	chr17_36996324_+	SINE	Alu	AluJb
CAediting_1185531	chr17_36996369_+	SINE	Alu	AluJb
CAediting_1185532	chr17_36996379_+	SINE	Alu	AluJb
CAediting_1185533	chr17_36996384_+	SINE	Alu	AluJb
CAediting_1185534	chr17_36996386_+	SINE	Alu	AluJb
CAediting_1185535	chr17_36996397_+	SINE	Alu	AluJb
CAediting_1185536	chr17_36996399_+	SINE	Alu	AluJb
CAediting_1185537	chr17_37001085_+	SINE	Alu	AluJo
CAediting_1185538	chr17_37001104_+	SINE	Alu	AluJo
CAediting_1185539	chr17_37001109_+	SINE	Alu	AluJo
CAediting_1185540	chr17_37001128_+	SINE	Alu	AluJo
CAediting_1185541	chr17_37001156_+	SINE	Alu	AluJo
CAediting_1185542	chr17_37001160_+	SINE	Alu	AluJo
CAediting_1185543	chr17_37001167_+	SINE	Alu	AluJo
CAediting_1185544	chr17_37001176_+	SINE	Alu	AluJo
CAediting_1185545	chr17_37001198_+	SINE	Alu	AluJo
CAediting_1185546	chr17_37001212_+	SINE	Alu	AluJo
CAediting_1185547	chr17_37002043_+	SINE	Alu	AluSz
CAediting_1185548	chr17_37002044_+	SINE	Alu	AluSz
CAediting_1185549	chr17_37002049_+	SINE	Alu	AluSz
CAediting_1185550	chr17_37003567_+	SINE	Alu	AluSz6
CAediting_1185551	chr17_37003579_+	SINE	Alu	AluSz6
CAediting_1185552	chr17_37003584_+	SINE	Alu	AluSz6
CAediting_1185553	chr17_37003839_+	SINE	Alu	AluSx3
CAediting_1185554	chr17_37003841_+	SINE	Alu	AluSx3
CAediting_1185555	chr17_37003918_+	SINE	Alu	AluSx3
CAediting_1185556	chr17_37003928_+	SINE	Alu	AluSx3
CAediting_1185557	chr17_37003939_+	SINE	Alu	AluSx3
CAediting_1185558	chr17_37004011_+	SINE	Alu	AluSx3
CAediting_1185559	chr17_37004210_+	SINE	Alu	AluSq2
CAediting_1185560	chr17_37005903_+	SINE	Alu	AluJo
CAediting_1185561	chr17_37005921_+	SINE	Alu	AluJo
CAediting_1185562	chr17_37005933_+	SINE	Alu	AluJo
CAediting_1185563	chr17_37006020_+	SINE	Alu	AluJo
CAediting_1185564	chr17_37006028_+	SINE	Alu	AluJo
CAediting_1185565	chr17_37006349_+	SINE	Alu	AluSp
CAediting_1185566	chr17_37007207_+	SINE	Alu	AluJr
CAediting_1185567	chr17_37007208_+	SINE	Alu	AluJr
CAediting_1185568	chr17_37007209_+	SINE	Alu	AluJr
CAediting_1185569	chr17_37007211_+	SINE	Alu	AluJr
CAediting_1185570	chr17_37007313_+	SINE	Alu	AluJr
CAediting_1185571	chr17_37007317_+	SINE	Alu	AluJr
CAediting_1185572	chr17_37007321_+	SINE	Alu	AluJr
CAediting_1185573	chr17_37007466_+	SINE	Alu	AluJr
CAediting_1185574	chr17_37007478_+	SINE	Alu	AluJr
CAediting_1185575	chr17_37008639_+	SINE	Alu	AluJr
CAediting_1185576	chr17_37008662_+	SINE	Alu	AluJr
CAediting_1185577	chr17_37008663_+	SINE	Alu	AluJr
CAediting_1185578	chr17_37008682_+	SINE	Alu	AluJr
CAediting_1185579	chr17_37008718_+	SINE	Alu	AluJr
CAediting_1185580	chr17_37008738_+	SINE	Alu	AluJr
CAediting_1185581	chr17_37008752_+	SINE	Alu	AluJr
CAediting_1185582	chr17_37009261_+	SINE	Alu	AluSq
CAediting_1185583	chr17_37010337_+	SINE	Alu	AluY
CAediting_1185584	chr17_37011156_+	SINE	Alu	AluSx
CAediting_1185585	chr17_37012321_+	SINE	Alu	AluSz
CAediting_1185586	chr17_37023867_+	DNA	TcMar-Tigger	MER2
CAediting_1185587	chr17_37023891_+	DNA	TcMar-Tigger	MER2
CAediting_1185588	chr17_37023893_+	DNA	TcMar-Tigger	MER2
CAediting_1185589	chr17_37023896_+	DNA	TcMar-Tigger	MER2
CAediting_1185590	chr17_37023897_+	DNA	TcMar-Tigger	MER2
CAediting_1185591	chr17_37023905_+	DNA	TcMar-Tigger	MER2
CAediting_1185592	chr17_37023908_+	DNA	TcMar-Tigger	MER2
CAediting_1185593	chr17_37023916_+	DNA	TcMar-Tigger	MER2
CAediting_1185594	chr17_37023918_+	DNA	TcMar-Tigger	MER2
CAediting_1185595	chr17_37023946_+	DNA	TcMar-Tigger	MER2
CAediting_1185596	chr17_37023947_+	DNA	TcMar-Tigger	MER2
CAediting_1185597	chr17_37023956_+	DNA	TcMar-Tigger	MER2
CAediting_1185598	chr17_37023974_+	DNA	TcMar-Tigger	MER2
CAediting_1185599	chr17_37023982_+	DNA	TcMar-Tigger	MER2
CAediting_1185600	chr17_37028156_+	SINE	Alu	AluJb
CAediting_1185601	chr17_37028175_+	SINE	Alu	AluJb
CAediting_1185602	chr17_37028275_+	SINE	Alu	AluJb
CAediting_1185603	chr17_37028354_+	SINE	Alu	AluJb
CAediting_1185604	chr17_37028416_+	SINE	Alu	AluJb
CAediting_1185605	chr17_37028428_+	SINE	Alu	AluJb
CAediting_1185606	chr17_37028585_+	SINE	Alu	AluJb
CAediting_1185607	chr17_37028621_+	SINE	Alu	AluJb
CAediting_1185608	chr17_37028626_+	SINE	Alu	AluJb
CAediting_1185609	chr17_37028665_+	SINE	Alu	AluJb
CAediting_1185610	chr17_37028679_+	SINE	Alu	AluJb
CAediting_1185611	chr17_37028707_+	SINE	Alu	AluJb
CAediting_1185612	chr17_37029344_+	SINE	Alu	AluSx
CAediting_1185613	chr17_37029510_+	SINE	Alu	AluSx
CAediting_1185614	chr17_37029588_+	SINE	Alu	AluSx
CAediting_1185615	chr17_37029589_+	SINE	Alu	AluSx
CAediting_1185616	chr17_37029592_+	SINE	Alu	AluSx
CAediting_1185617	chr17_37029593_+	SINE	Alu	AluSx
CAediting_1185618	chr17_37029594_+	SINE	Alu	AluSx
CAediting_1185619	chr17_37029629_+	SINE	Alu	AluSx
CAediting_1185620	chr17_37029711_+	SINE	Alu	AluSx
CAediting_1185621	chr17_37030125_+	SINE	Alu	AluJr
CAediting_1185622	chr17_37030139_+	SINE	Alu	AluJr
CAediting_1185623	chr17_37030173_+	SINE	Alu	AluJr
CAediting_1185624	chr17_37030180_+	SINE	Alu	AluJr
CAediting_1185625	chr17_37031263_+	DNA	TcMar-Tigger	MER2
CAediting_1185626	chr17_37031272_+	DNA	TcMar-Tigger	MER2
CAediting_1185627	chr17_37031280_+	DNA	TcMar-Tigger	MER2
CAediting_1185628	chr17_37031281_+	DNA	TcMar-Tigger	MER2
CAediting_1185629	chr17_37031305_+	DNA	TcMar-Tigger	MER2
CAediting_1185630	chr17_37031309_+	DNA	TcMar-Tigger	MER2
CAediting_1185631	chr17_37031331_+	DNA	TcMar-Tigger	MER2
CAediting_1185632	chr17_37031336_+	DNA	TcMar-Tigger	MER2
CAediting_1185633	chr17_37031338_+	DNA	TcMar-Tigger	MER2
CAediting_1185634	chr17_37031343_+	DNA	TcMar-Tigger	MER2
CAediting_1185635	chr17_37031344_+	DNA	TcMar-Tigger	MER2
CAediting_1185636	chr17_37031346_+	DNA	TcMar-Tigger	MER2
CAediting_1185637	chr17_37031359_+	DNA	TcMar-Tigger	MER2
CAediting_1185638	chr17_37031363_+	DNA	TcMar-Tigger	MER2
CAediting_1185639	chr17_37031364_+	DNA	TcMar-Tigger	MER2
CAediting_1185640	chr17_37034836_+	LINE	L1	L1M5
CAediting_1185641	chr17_37034843_+	LINE	L1	L1M5
CAediting_1185642	chr17_37035004_+	SINE	Alu	AluY
CAediting_1185643	chr17_37035238_+	SINE	Alu	AluSx3
CAediting_1185644	chr17_37035632_+	SINE	Alu	AluSx
CAediting_1185645	chr17_37035709_+	SINE	Alu	AluSx
CAediting_1185646	chr17_37035715_+	SINE	Alu	AluSx
CAediting_1185647	chr17_37053787_+	SINE	Alu	AluSc

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RNA A-to-I editing events in the alternative splicing sites for AATF

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000275700.3.AATF.

Correlation between RNA A-to-I editing and PSI for ENSG00000275700.3.AATF.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for AATF

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for AATF

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for AATF

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000275700.3	ENST00000613840	hsa-miR-4477b	36953837	36953842	6mer	36953823	36953843	148	-11.71

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for AATF

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for AATF

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for AATF

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
STAD	pathologic_stage	CAediting_1185431	chr17_36956856_+	0.0211770331344625	-0.325258212388472

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Relation with survival for AATF

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for AATF

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for AATF

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene