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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: BLOC1S6 (CAeditome ID:26258)

Gene summary for BLOC1S6

check button Gene summary
Gene informationGene symbol

BLOC1S6

Gene ID

26258

Gene namebiogenesis of lysosomal organelles complex 1 subunit 6
SynonymsBLOS6|HPS9|PA|PALLID|PLDN
Cytomap

15q21.1

Type of geneprotein-coding
Descriptionbiogenesis of lysosome-related organelles complex 1 subunit 6BLOC-1 subunit 6BLOC-1 subunit pallidinbiogenesis of lysosomal organelles complex-1, subunit 5, pallidinbiogenesis of lysosomal organelles complex-1, subunit 6, pallidinpallid protein homol
Modification date20210518
UniProtAcc

Q9UL45

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
BLOC1S6

GO:0042803

Biogenesis of lysosome-related organelles complex 1 subunit 6

12019270

BLOC1S6

GO:0042803

Biogenesis of lysosome-related organelles complex 1 subunit 6

12191018

BLOC1S6

GO:0051015

Biogenesis of lysosome-related organelles complex 1 subunit 6

12019270

BLOC1S6

GO:0032402

Biogenesis of lysosome-related organelles complex 1 subunit 6

17182842

BLOC1S6

GO:0035646

Biogenesis of lysosome-related organelles complex 1 subunit 6

17182842

BLOC1S6

GO:0050942

Biogenesis of lysosome-related organelles complex 1 subunit 6

17182842

BLOC1S6

GO:0005737

Biogenesis of lysosome-related organelles complex 1 subunit 6

12019270

BLOC1S6

GO:0005737

Biogenesis of lysosome-related organelles complex 1 subunit 6

12191018

BLOC1S6

GO:0019898

Biogenesis of lysosome-related organelles complex 1 subunit 6

12019270

BLOC1S6

GO:0019898

Biogenesis of lysosome-related organelles complex 1 subunit 6

12191018

BLOC1S6

GO:0030133

Biogenesis of lysosome-related organelles complex 1 subunit 6

17182842

BLOC1S6

GO:0031083

Biogenesis of lysosome-related organelles complex 1 subunit 6

12019270

BLOC1S6

GO:0031083

Biogenesis of lysosome-related organelles complex 1 subunit 6

15102850

BLOC1S6

GO:0031083

Biogenesis of lysosome-related organelles complex 1 subunit 6

17182842

BLOC1S6

GO:0031083

Biogenesis of lysosome-related organelles complex 1 subunit 6

22203680


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RNA A-to-I events for BLOC1S6

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000104164.9

check button RNA A-to-I editing events in Cancer.
CAediting_1037994(45593117, +), CAediting_1037995(45593138, +), CAediting_1037996(45593139, +), CAediting_1037997(45593223, +), CAediting_1037998(45593224, +), CAediting_1037999(45593225, +), CAediting_1038000(45593226, +), CAediting_1038001(45593229, +), CAediting_1038002(45593232, +), CAediting_1038003(45593234, +), CAediting_1038004(45593235, +), CAediting_1038005(45593236, +), CAediting_1038006(45593239, +), CAediting_1038007(45593259, +), CAediting_1038008(45593265, +), CAediting_1038009(45593275, +), CAediting_1038010(45593288, +), CAediting_1038011(45593292, +), CAediting_1038012(45593298, +), CAediting_1038013(45593307, +), CAediting_1038014(45593329, +), CAediting_1038015(45593360, +), CAediting_1038016(45594603, +), CAediting_1038017(45594627, +), CAediting_1038018(45594684, +), CAediting_1038019(45594686, +), CAediting_1038020(45594701, +), CAediting_1038021(45594713, +), CAediting_1038022(45594723, +), CAediting_1038023(45594726, +), CAediting_1038024(45595122, +), CAediting_1038025(45595858, +), CAediting_1038026(45595947, +), CAediting_1038027(45595949, +), CAediting_1038028(45595988, +), CAediting_1038029(45596337, +), CAediting_1038030(45596339, +), CAediting_1038031(45596355, +), CAediting_1038032(45596730, +), CAediting_1038033(45597221, +), CAediting_1038034(45597296, +), CAediting_1038035(45597326, +), CAediting_1038036(45597327, +), CAediting_1038037(45597328, +), CAediting_1038038(45597358, +), CAediting_1038039(45597426, +), CAediting_1038040(45597472, +), CAediting_1038041(45597923, +), CAediting_1038042(45597930, +), CAediting_1038043(45597931, +), CAediting_1038044(45598030, +), CAediting_1038045(45598031, +), CAediting_1038046(45598041, +), CAediting_1038047(45598048, +), CAediting_1038048(45598058, +), CAediting_1038049(45598075, +), CAediting_1038050(45598076, +), CAediting_1038051(45598077, +), CAediting_1038052(45598104, +), CAediting_1038053(45598110, +), CAediting_1038054(45598111, +), CAediting_1038055(45598113, +), CAediting_1038056(45598125, +), CAediting_1038057(45598126, +), CAediting_1038058(45598134, +), CAediting_1038059(45598135, +), CAediting_1038060(45598148, +), CAediting_1038061(45600429, +), CAediting_1038062(45600486, +), CAediting_1038063(45600502, +), CAediting_1038064(45600504, +), CAediting_1038065(45600511, +), CAediting_1038066(45600512, +), CAediting_1038067(45600514, +), CAediting_1038068(45600544, +), CAediting_1038069(45600566, +), CAediting_1038070(45600567, +), CAediting_1038071(45600596, +), CAediting_1038072(45600601, +), CAediting_1038073(45600603, +), CAediting_1038074(45600607, +), CAediting_1038075(45600612, +), CAediting_1038076(45600620, +), CAediting_1038077(45600622, +), CAediting_1038078(45600647, +), CAediting_1038079(45600699, +), CAediting_1038080(45601898, +), CAediting_1038081(45601912, +), CAediting_1038082(45601924, +), CAediting_1038083(45601934, +), CAediting_1038084(45601955, +), CAediting_1038085(45601967, +), CAediting_1038086(45601980, +), CAediting_1038087(45601981, +), CAediting_1038088(45601984, +), CAediting_1038089(45601998, +), CAediting_1038090(45602007, +), CAediting_1038091(45602010, +), CAediting_1038092(45602020, +), CAediting_1038093(45602134, +), CAediting_1038094(45603611, +), CAediting_1038095(45604174, +), CAediting_1038096(45607511, +), CAediting_1038097(45607519, +), CAediting_1038098(45607520, +), CAediting_1038099(45607526, +), CAediting_1038100(45607587, +), CAediting_1038101(45607597, +), CAediting_1038102(45607614, +), CAediting_1038103(45607617, +), CAediting_1038104(45607620, +), CAediting_1038105(45607622, +), CAediting_1038106(45607626, +), CAediting_1038107(45607652, +), CAediting_1038108(45607658, +), CAediting_1038109(45607662, +), CAediting_1038110(45607675, +), CAediting_1038111(45607679, +), CAediting_1038112(45607717, +), CAediting_1038113(45607718, +), CAediting_1038114(45607722, +), CAediting_1038115(45607723, +), CAediting_1038116(45607781, +), CAediting_1038117(45607783, +), CAediting_1038118(45609195, +), CAediting_1038119(45609201, +), CAediting_1038120(45609202, +), CAediting_1038121(45609224, +), CAediting_1038122(45609232, +), CAediting_1038123(45609256, +), CAediting_1038124(45609306, +), CAediting_1038125(45609330, +), CAediting_1038126(45610110, +), CAediting_1038127(45610133, +), CAediting_1038128(45610135, +),

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RNA editing positional annotations for BLOC1S6 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_1038041chr15_45597923_+nonsynonymous SNVENST00000569076.4c.A1Gp.M1VD.N

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1037994chr15_45593117_+ncRNA_intronic
CAediting_1037995chr15_45593138_+ncRNA_intronic
CAediting_1037996chr15_45593139_+ncRNA_intronic
CAediting_1037997chr15_45593223_+ncRNA_intronic
CAediting_1037998chr15_45593224_+ncRNA_intronic
CAediting_1037999chr15_45593225_+ncRNA_intronic
CAediting_1038000chr15_45593226_+ncRNA_intronic
CAediting_1038001chr15_45593229_+ncRNA_intronic
CAediting_1038002chr15_45593232_+ncRNA_intronic
CAediting_1038003chr15_45593234_+ncRNA_intronic
CAediting_1038004chr15_45593235_+ncRNA_intronic
CAediting_1038005chr15_45593236_+ncRNA_intronic
CAediting_1038006chr15_45593239_+ncRNA_intronic
CAediting_1038007chr15_45593259_+ncRNA_intronic
CAediting_1038008chr15_45593265_+ncRNA_intronic
CAediting_1038009chr15_45593275_+ncRNA_intronic
CAediting_1038010chr15_45593288_+ncRNA_intronic
CAediting_1038011chr15_45593292_+ncRNA_intronic
CAediting_1038012chr15_45593298_+ncRNA_intronic
CAediting_1038013chr15_45593307_+ncRNA_intronic
CAediting_1038014chr15_45593329_+ncRNA_intronic
CAediting_1038015chr15_45593360_+ncRNA_intronic
CAediting_1038016chr15_45594603_+ncRNA_intronic
CAediting_1038017chr15_45594627_+ncRNA_intronic
CAediting_1038018chr15_45594684_+ncRNA_intronic
CAediting_1038019chr15_45594686_+ncRNA_intronic
CAediting_1038020chr15_45594701_+ncRNA_intronic
CAediting_1038021chr15_45594713_+ncRNA_intronic
CAediting_1038022chr15_45594723_+ncRNA_intronic
CAediting_1038023chr15_45594726_+ncRNA_intronic
CAediting_1038024chr15_45595122_+ncRNA_intronic
CAediting_1038025chr15_45595858_+ncRNA_intronic
CAediting_1038026chr15_45595947_+ncRNA_intronic
CAediting_1038027chr15_45595949_+ncRNA_intronic
CAediting_1038028chr15_45595988_+ncRNA_intronic
CAediting_1038029chr15_45596337_+ncRNA_intronic
CAediting_1038030chr15_45596339_+ncRNA_intronic
CAediting_1038031chr15_45596355_+ncRNA_intronic
CAediting_1038032chr15_45596730_+ncRNA_intronic
CAediting_1038033chr15_45597221_+ncRNA_intronic
CAediting_1038034chr15_45597296_+ncRNA_intronic
CAediting_1038035chr15_45597326_+ncRNA_intronic
CAediting_1038036chr15_45597327_+ncRNA_intronic
CAediting_1038037chr15_45597328_+ncRNA_intronic
CAediting_1038038chr15_45597358_+ncRNA_intronic
CAediting_1038039chr15_45597426_+ncRNA_intronic
CAediting_1038040chr15_45597472_+ncRNA_intronic
CAediting_1038041chr15_45597923_+exonic
CAediting_1038042chr15_45597930_+exonic
CAediting_1038043chr15_45597931_+exonic
CAediting_1038044chr15_45598030_+ncRNA_intronic
CAediting_1038045chr15_45598031_+ncRNA_intronic
CAediting_1038046chr15_45598041_+ncRNA_intronic
CAediting_1038047chr15_45598048_+ncRNA_intronic
CAediting_1038048chr15_45598058_+ncRNA_intronic
CAediting_1038049chr15_45598075_+ncRNA_intronic
CAediting_1038050chr15_45598076_+ncRNA_intronic
CAediting_1038051chr15_45598077_+ncRNA_intronic
CAediting_1038052chr15_45598104_+ncRNA_intronic
CAediting_1038053chr15_45598110_+ncRNA_intronic
CAediting_1038054chr15_45598111_+ncRNA_intronic
CAediting_1038055chr15_45598113_+ncRNA_intronic
CAediting_1038056chr15_45598125_+ncRNA_intronic
CAediting_1038057chr15_45598126_+ncRNA_intronic
CAediting_1038058chr15_45598134_+ncRNA_intronic
CAediting_1038059chr15_45598135_+ncRNA_intronic
CAediting_1038060chr15_45598148_+ncRNA_intronic
CAediting_1038061chr15_45600429_+ncRNA_intronic
CAediting_1038062chr15_45600486_+ncRNA_intronic
CAediting_1038063chr15_45600502_+ncRNA_intronic
CAediting_1038064chr15_45600504_+ncRNA_intronic
CAediting_1038065chr15_45600511_+ncRNA_intronic
CAediting_1038066chr15_45600512_+ncRNA_intronic
CAediting_1038067chr15_45600514_+ncRNA_intronic
CAediting_1038068chr15_45600544_+ncRNA_intronic
CAediting_1038069chr15_45600566_+ncRNA_intronic
CAediting_1038070chr15_45600567_+ncRNA_intronic
CAediting_1038071chr15_45600596_+ncRNA_intronic
CAediting_1038072chr15_45600601_+ncRNA_intronic
CAediting_1038073chr15_45600603_+ncRNA_intronic
CAediting_1038074chr15_45600607_+ncRNA_intronic
CAediting_1038075chr15_45600612_+ncRNA_intronic
CAediting_1038076chr15_45600620_+ncRNA_intronic
CAediting_1038077chr15_45600622_+ncRNA_intronic
CAediting_1038078chr15_45600647_+ncRNA_intronic
CAediting_1038079chr15_45600699_+ncRNA_intronic
CAediting_1038080chr15_45601898_+ncRNA_intronic
CAediting_1038081chr15_45601912_+ncRNA_intronic
CAediting_1038082chr15_45601924_+ncRNA_intronic
CAediting_1038083chr15_45601934_+ncRNA_intronic
CAediting_1038084chr15_45601955_+ncRNA_intronic
CAediting_1038085chr15_45601967_+ncRNA_intronic
CAediting_1038086chr15_45601980_+ncRNA_intronic
CAediting_1038087chr15_45601981_+ncRNA_intronic
CAediting_1038088chr15_45601984_+ncRNA_intronic
CAediting_1038089chr15_45601998_+ncRNA_intronic
CAediting_1038090chr15_45602007_+ncRNA_intronic
CAediting_1038091chr15_45602010_+ncRNA_intronic
CAediting_1038092chr15_45602020_+ncRNA_intronic
CAediting_1038093chr15_45602134_+ncRNA_intronic
CAediting_1038094chr15_45603611_+ncRNA_intronic
CAediting_1038095chr15_45604174_+ncRNA_intronic
CAediting_1038096chr15_45607511_+UTR3
CAediting_1038097chr15_45607519_+UTR3
CAediting_1038098chr15_45607520_+UTR3
CAediting_1038099chr15_45607526_+UTR3
CAediting_1038100chr15_45607587_+UTR3
CAediting_1038101chr15_45607597_+UTR3
CAediting_1038102chr15_45607614_+UTR3
CAediting_1038103chr15_45607617_+UTR3
CAediting_1038104chr15_45607620_+UTR3
CAediting_1038105chr15_45607622_+UTR3
CAediting_1038106chr15_45607626_+UTR3
CAediting_1038107chr15_45607652_+UTR3
CAediting_1038108chr15_45607658_+UTR3
CAediting_1038109chr15_45607662_+UTR3
CAediting_1038110chr15_45607675_+UTR3
CAediting_1038111chr15_45607679_+UTR3
CAediting_1038112chr15_45607717_+UTR3
CAediting_1038113chr15_45607718_+UTR3
CAediting_1038114chr15_45607722_+UTR3
CAediting_1038115chr15_45607723_+UTR3
CAediting_1038116chr15_45607781_+UTR3
CAediting_1038117chr15_45607783_+UTR3
CAediting_1038118chr15_45609195_+UTR3
CAediting_1038119chr15_45609201_+UTR3
CAediting_1038120chr15_45609202_+UTR3
CAediting_1038121chr15_45609224_+UTR3
CAediting_1038122chr15_45609232_+UTR3
CAediting_1038123chr15_45609256_+UTR3
CAediting_1038124chr15_45609306_+UTR3
CAediting_1038125chr15_45609330_+UTR3
CAediting_1038126chr15_45610110_+intronic
CAediting_1038127chr15_45610133_+intronic
CAediting_1038128chr15_45610135_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1037994chr15_45593117_+SINEAluAluSz
CAediting_1037995chr15_45593138_+SINEAluAluSz
CAediting_1037996chr15_45593139_+SINEAluAluSz
CAediting_1037997chr15_45593223_+SINEAluAluSz
CAediting_1037998chr15_45593224_+SINEAluAluSz
CAediting_1037999chr15_45593225_+SINEAluAluSz
CAediting_1038000chr15_45593226_+SINEAluAluSz
CAediting_1038001chr15_45593229_+SINEAluAluSz
CAediting_1038002chr15_45593232_+SINEAluAluSz
CAediting_1038003chr15_45593234_+SINEAluAluSz
CAediting_1038004chr15_45593235_+SINEAluAluSz
CAediting_1038005chr15_45593236_+SINEAluAluSz
CAediting_1038006chr15_45593239_+SINEAluAluSz
CAediting_1038007chr15_45593259_+SINEAluAluSz
CAediting_1038008chr15_45593265_+SINEAluAluSz
CAediting_1038009chr15_45593275_+SINEAluAluSz
CAediting_1038010chr15_45593288_+SINEAluAluSz
CAediting_1038011chr15_45593292_+SINEAluAluSz
CAediting_1038012chr15_45593298_+SINEAluAluSz
CAediting_1038013chr15_45593307_+SINEAluAluSz
CAediting_1038014chr15_45593329_+SINEAluAluSz
CAediting_1038015chr15_45593360_+SINEAluAluSz
CAediting_1038016chr15_45594603_+SINEAluAluSz
CAediting_1038017chr15_45594627_+SINEAluAluSz
CAediting_1038018chr15_45594684_+SINEAluAluSz
CAediting_1038019chr15_45594686_+SINEAluAluSz
CAediting_1038020chr15_45594701_+SINEAluAluSz
CAediting_1038021chr15_45594713_+SINEAluAluSz
CAediting_1038022chr15_45594723_+SINEAluAluSz
CAediting_1038023chr15_45594726_+SINEAluAluSz
CAediting_1038024chr15_45595122_+SINEAluAluJb
CAediting_1038025chr15_45595858_+SINEAluAluSp
CAediting_1038026chr15_45595947_+SINEAluAluSp
CAediting_1038027chr15_45595949_+SINEAluAluSp
CAediting_1038028chr15_45595988_+SINEAluAluSp
CAediting_1038029chr15_45596337_+SINEAluAluJb
CAediting_1038030chr15_45596339_+SINEAluAluJb
CAediting_1038031chr15_45596355_+SINEAluAluJb
CAediting_1038032chr15_45596730_+SINEAluAluSx
CAediting_1038033chr15_45597221_+SINEAluAluJr4
CAediting_1038034chr15_45597296_+SINEAluAluJr4
CAediting_1038035chr15_45597326_+SINEAluAluJr4
CAediting_1038036chr15_45597327_+SINEAluAluJr4
CAediting_1038037chr15_45597328_+SINEAluAluJr4
CAediting_1038038chr15_45597358_+SINEAluAluJr4
CAediting_1038039chr15_45597426_+SINEAluAluJr4
CAediting_1038040chr15_45597472_+SINEAluAluJr4
CAediting_1038041chr15_45597923_+LINEL1L1PA2
CAediting_1038042chr15_45597930_+LINEL1L1PA2
CAediting_1038043chr15_45597931_+LINEL1L1PA2
CAediting_1038044chr15_45598030_+LINEL1L1PA2
CAediting_1038045chr15_45598031_+LINEL1L1PA2
CAediting_1038046chr15_45598041_+LINEL1L1PA2
CAediting_1038047chr15_45598048_+LINEL1L1PA2
CAediting_1038048chr15_45598058_+LINEL1L1PA2
CAediting_1038049chr15_45598075_+LINEL1L1PA2
CAediting_1038050chr15_45598076_+LINEL1L1PA2
CAediting_1038051chr15_45598077_+LINEL1L1PA2
CAediting_1038052chr15_45598104_+LINEL1L1PA2
CAediting_1038053chr15_45598110_+LINEL1L1PA2
CAediting_1038054chr15_45598111_+LINEL1L1PA2
CAediting_1038055chr15_45598113_+LINEL1L1PA2
CAediting_1038056chr15_45598125_+LINEL1L1PA2
CAediting_1038057chr15_45598126_+LINEL1L1PA2
CAediting_1038058chr15_45598134_+LINEL1L1PA2
CAediting_1038059chr15_45598135_+LINEL1L1PA2
CAediting_1038060chr15_45598148_+LINEL1L1PA2
CAediting_1038061chr15_45600429_+LINEL1L1MC
CAediting_1038062chr15_45600486_+LINEL1L1MC
CAediting_1038063chr15_45600502_+LINEL1L1MC
CAediting_1038064chr15_45600504_+LINEL1L1MC
CAediting_1038065chr15_45600511_+LINEL1L1MC
CAediting_1038066chr15_45600512_+LINEL1L1MC
CAediting_1038067chr15_45600514_+LINEL1L1MC
CAediting_1038068chr15_45600544_+LINEL1L1MC
CAediting_1038069chr15_45600566_+LINEL1L1MC
CAediting_1038070chr15_45600567_+LINEL1L1MC
CAediting_1038071chr15_45600596_+LINEL1L1MC
CAediting_1038072chr15_45600601_+LINEL1L1MC
CAediting_1038073chr15_45600603_+LINEL1L1MC
CAediting_1038074chr15_45600607_+LINEL1L1MC
CAediting_1038075chr15_45600612_+LINEL1L1MC
CAediting_1038076chr15_45600620_+LINEL1L1MC
CAediting_1038077chr15_45600622_+LINEL1L1MC
CAediting_1038078chr15_45600647_+LINEL1L1MC
CAediting_1038079chr15_45600699_+LINEL1L1MC
CAediting_1038080chr15_45601898_+SINEAluAluJo
CAediting_1038081chr15_45601912_+SINEAluAluJo
CAediting_1038082chr15_45601924_+SINEAluAluJo
CAediting_1038083chr15_45601934_+SINEAluAluJo
CAediting_1038084chr15_45601955_+SINEAluAluJo
CAediting_1038085chr15_45601967_+SINEAluAluJo
CAediting_1038086chr15_45601980_+SINEAluAluJo
CAediting_1038087chr15_45601981_+SINEAluAluJo
CAediting_1038088chr15_45601984_+SINEAluAluJo
CAediting_1038089chr15_45601998_+SINEAluAluJo
CAediting_1038090chr15_45602007_+SINEAluAluJo
CAediting_1038091chr15_45602010_+SINEAluAluJo
CAediting_1038092chr15_45602020_+SINEAluAluJo
CAediting_1038093chr15_45602134_+SINEAluAluJo
CAediting_1038094chr15_45603611_+SINEAluAluJr
CAediting_1038095chr15_45604174_+SINEAluAluSz6
CAediting_1038096chr15_45607511_+SINEAluAluSc
CAediting_1038097chr15_45607519_+SINEAluAluSc
CAediting_1038098chr15_45607520_+SINEAluAluSc
CAediting_1038099chr15_45607526_+SINEAluAluSc
CAediting_1038100chr15_45607587_+SINEAluAluSc
CAediting_1038101chr15_45607597_+SINEAluAluSc
CAediting_1038102chr15_45607614_+SINEAluAluSc
CAediting_1038103chr15_45607617_+SINEAluAluSc
CAediting_1038104chr15_45607620_+SINEAluAluSc
CAediting_1038105chr15_45607622_+SINEAluAluSc
CAediting_1038106chr15_45607626_+SINEAluAluSc
CAediting_1038107chr15_45607652_+SINEAluAluSc
CAediting_1038108chr15_45607658_+SINEAluAluSc
CAediting_1038109chr15_45607662_+SINEAluAluSc
CAediting_1038110chr15_45607675_+SINEAluAluSc
CAediting_1038111chr15_45607679_+SINEAluAluSc
CAediting_1038112chr15_45607717_+SINEAluAluSc
CAediting_1038113chr15_45607718_+SINEAluAluSc
CAediting_1038114chr15_45607722_+SINEAluAluSc
CAediting_1038115chr15_45607723_+SINEAluAluSc
CAediting_1038116chr15_45607781_+SINEAluAluSc
CAediting_1038117chr15_45607783_+SINEAluAluSc
CAediting_1038118chr15_45609195_+SINEAluAluJr
CAediting_1038119chr15_45609201_+SINEAluAluJr
CAediting_1038120chr15_45609202_+SINEAluAluJr
CAediting_1038121chr15_45609224_+SINEAluAluJr
CAediting_1038122chr15_45609232_+SINEAluAluJr
CAediting_1038123chr15_45609256_+SINEAluAluJr
CAediting_1038124chr15_45609306_+SINEAluAluJr
CAediting_1038125chr15_45609330_+SINEAluAluJr
CAediting_1038126chr15_45610110_+SINEAluAluSz6
CAediting_1038127chr15_45610133_+SINEAluAluSz6
CAediting_1038128chr15_45610135_+SINEAluAluSz6

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RNA A-to-I editing events in the alternative splicing sites for BLOC1S6

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000104164.9.BLOC1S6.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000104164.9.BLOC1S6.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for BLOC1S6

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for BLOC1S6

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for BLOC1S6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1038096chr15_45607511_+ENSG00000104164.9ENST00000567523hsa-miR-3622a-5p45607509456075157mer-m84560749345607516147.00-30.07
CAediting_1038096chr15_45607511_+ENSG00000104164.9ENST00000568816hsa-miR-3622a-5p45607509456075157mer-m84560749345607516147.00-30.07
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000567523hsa-miR-513a-5p45607513456075197mer-m84560750345607520152.00-17.32
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000567523hsa-miR-513a-5p45607513456075197mer-m84560750345607520152.00-17.32
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000567523hsa-miR-63845607518456075247mer-1a4560750045607524155.00-34.17
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000568816hsa-miR-513a-5p45607513456075197mer-m84560750345607520152.00-17.32
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000568816hsa-miR-513a-5p45607513456075197mer-m84560750345607520152.00-17.32
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000568816hsa-miR-63845607518456075247mer-1a4560750045607524155.00-34.17
CAediting_1038098chr15_45607520_+ENSG00000104164.9ENST00000567523hsa-miR-805245607518456075247mer-1a4560750645607524148.00-29.06
CAediting_1038098chr15_45607520_+ENSG00000104164.9ENST00000568816hsa-miR-805245607518456075247mer-1a4560750645607524148.00-29.06
CAediting_1038099chr15_45607526_+ENSG00000104164.9ENST00000567523hsa-miR-518e-3p45607524456075307mer-m84560751045607531144.00-14.43
CAediting_1038099chr15_45607526_+ENSG00000104164.9ENST00000567523hsa-miR-6506-5p45607519456075257mer-m84560750445607526144.00-16.21
CAediting_1038099chr15_45607526_+ENSG00000104164.9ENST00000568816hsa-miR-518e-3p45607524456075307mer-m84560751045607531144.00-14.43
CAediting_1038099chr15_45607526_+ENSG00000104164.9ENST00000568816hsa-miR-6506-5p45607519456075257mer-m84560750445607526144.00-16.21
CAediting_1038101chr15_45607597_+ENSG00000104164.9ENST00000567523hsa-miR-412-3p45607590456075967mer-m84560757545607597151.00-16.53
CAediting_1038101chr15_45607597_+ENSG00000104164.9ENST00000567523hsa-miR-450845607595456076017mer-m84560758645607602140.00-21.85
CAediting_1038101chr15_45607597_+ENSG00000104164.9ENST00000567523hsa-miR-6754-3p45607590456075967mer-m84560757745607597144.00-15.76
CAediting_1038101chr15_45607597_+ENSG00000104164.9ENST00000568816hsa-miR-412-3p45607590456075967mer-m84560757545607597151.00-16.53
CAediting_1038101chr15_45607597_+ENSG00000104164.9ENST00000568816hsa-miR-450845607595456076017mer-m84560758645607602140.00-21.85
CAediting_1038101chr15_45607597_+ENSG00000104164.9ENST00000568816hsa-miR-6754-3p45607590456075967mer-m84560757745607597144.00-15.76
CAediting_1038104chr15_45607620_+ENSG00000104164.9ENST00000567523hsa-miR-4742-3p45607613456076208mer-1a4560759745607620141.00-10.11
CAediting_1038104chr15_45607620_+ENSG00000104164.9ENST00000568816hsa-miR-4742-3p45607613456076208mer-1a4560759745607620141.00-10.11
CAediting_1038105chr15_45607622_+ENSG00000104164.9ENST00000567523hsa-miR-684445607616456076227mer-m84560760345607623152.00-7.50
CAediting_1038105chr15_45607622_+ENSG00000104164.9ENST00000568816hsa-miR-684445607616456076227mer-m84560760345607623152.00-7.50
CAediting_1038109chr15_45607662_+ENSG00000104164.9ENST00000567523hsa-miR-1207-3p45607655456076617mer-m84560764445607662145.00-13.53
CAediting_1038109chr15_45607662_+ENSG00000104164.9ENST00000567523hsa-miR-64645607657456076637mer-m84560764545607664148.00-22.30
CAediting_1038109chr15_45607662_+ENSG00000104164.9ENST00000568816hsa-miR-1207-3p45607655456076617mer-m84560764445607662145.00-13.53
CAediting_1038109chr15_45607662_+ENSG00000104164.9ENST00000568816hsa-miR-64645607657456076637mer-m84560764545607664148.00-22.30
CAediting_1038110chr15_45607675_+ENSG00000104164.9ENST00000567523hsa-miR-191345607673456076797mer-m84560765945607680147.00-22.10
CAediting_1038110chr15_45607675_+ENSG00000104164.9ENST00000567523hsa-miR-6849-3p45607668456076747mer-m84560765445607675140.00-18.03
CAediting_1038110chr15_45607675_+ENSG00000104164.9ENST00000568816hsa-miR-191345607673456076797mer-m84560765945607680147.00-22.10
CAediting_1038110chr15_45607675_+ENSG00000104164.9ENST00000568816hsa-miR-6849-3p45607668456076747mer-m84560765445607675140.00-18.03
CAediting_1038112chr15_45607717_+ENSG00000104164.9ENST00000567523hsa-miR-1304-3p45607712456077187mer-m84560769845607719167.00-30.42
CAediting_1038112chr15_45607717_+ENSG00000104164.9ENST00000567523hsa-miR-428445607714456077218mer-1a4560770445607721151.00-16.70
CAediting_1038112chr15_45607717_+ENSG00000104164.9ENST00000568816hsa-miR-1304-3p45607712456077187mer-m84560769845607719167.00-30.42
CAediting_1038112chr15_45607717_+ENSG00000104164.9ENST00000568816hsa-miR-428445607714456077218mer-1a4560770445607721151.00-16.70
CAediting_1038113chr15_45607718_+ENSG00000104164.9ENST00000567523hsa-miR-24-1-5p45607713456077197mer-m84560769845607720150.00-20.18
CAediting_1038113chr15_45607718_+ENSG00000104164.9ENST00000567523hsa-miR-24-2-5p45607713456077197mer-m84560769845607720148.00-17.64
CAediting_1038113chr15_45607718_+ENSG00000104164.9ENST00000568816hsa-miR-24-1-5p45607713456077197mer-m84560769845607720150.00-20.18
CAediting_1038113chr15_45607718_+ENSG00000104164.9ENST00000568816hsa-miR-24-2-5p45607713456077197mer-m84560769845607720148.00-17.64
CAediting_1038114chr15_45607722_+ENSG00000104164.9ENST00000567523hsa-miR-4638-5p45607717456077248mer-1a4560770345607724144.00-16.16
CAediting_1038114chr15_45607722_+ENSG00000104164.9ENST00000568816hsa-miR-4638-5p45607717456077248mer-1a4560770345607724144.00-16.16
CAediting_1038119chr15_45609201_+ENSG00000104164.9ENST00000568816hsa-miR-63845609200456092067mer-1a4560918245609206151.00-29.55
CAediting_1038121chr15_45609224_+ENSG00000104164.9ENST00000568816hsa-miR-6849-3p45609217456092237mer-m84560920345609224140.00-18.69
CAediting_1038123chr15_45609256_+ENSG00000104164.9ENST00000568816hsa-miR-1211345609249456092557mer-m84560923845609256152.00-21.73
CAediting_1038123chr15_45609256_+ENSG00000104164.9ENST00000568816hsa-miR-345-3p45609251456092577mer-m84560923745609258150.00-26.39
CAediting_1038123chr15_45609256_+ENSG00000104164.9ENST00000568816hsa-miR-453945609249456092557mer-m84560923745609256151.00-20.09
CAediting_1038123chr15_45609256_+ENSG00000104164.9ENST00000568816hsa-miR-6779-3p45609253456092597mer-m84560923945609260153.00-22.47
CAediting_1038123chr15_45609256_+ENSG00000104164.9ENST00000568816hsa-miR-797645609252456092587mer-m84560924245609259158.00-21.01
CAediting_1038125chr15_45609330_+ENSG00000104164.9ENST00000568816hsa-miR-4652-3p45609325456093317mer-m84560931145609332140.00-10.35
CAediting_1038125chr15_45609330_+ENSG00000104164.9ENST00000568816hsa-miR-6739-3p45609328456093358mer-1a4560931545609335162.00-11.17
CAediting_1038100chr15_45607587_+ENSG00000104164.9ENST00000567523hsa-miR-3190-5p45607580456075867mer-m84560756845607587150.00-18.87
CAediting_1038100chr15_45607587_+ENSG00000104164.9ENST00000568816hsa-miR-3190-5p45607580456075867mer-m84560756845607587150.00-18.87
CAediting_1038102chr15_45607614_+ENSG00000104164.9ENST00000567523hsa-miR-3675-3p45607609456076168mer-1a4560759345607616145.00-9.25
CAediting_1038102chr15_45607614_+ENSG00000104164.9ENST00000568816hsa-miR-3675-3p45607609456076168mer-1a4560759345607616145.00-9.25
CAediting_1038103chr15_45607617_+ENSG00000104164.9ENST00000567523hsa-miR-3680-3p45607614456076218mer-1a4560760145607621144.00-15.98
CAediting_1038103chr15_45607617_+ENSG00000104164.9ENST00000567523hsa-miR-3680-3p45607614456076218mer-1a4560760145607621144.00-15.98
CAediting_1038103chr15_45607617_+ENSG00000104164.9ENST00000568816hsa-miR-3680-3p45607614456076218mer-1a4560760145607621144.00-15.98
CAediting_1038103chr15_45607617_+ENSG00000104164.9ENST00000568816hsa-miR-3680-3p45607614456076218mer-1a4560760145607621144.00-15.98
CAediting_1038107chr15_45607652_+ENSG00000104164.9ENST00000567523hsa-miR-140-3p45607647456076537mer-m84560763345607654150.00-23.62
CAediting_1038107chr15_45607652_+ENSG00000104164.9ENST00000568816hsa-miR-140-3p45607647456076537mer-m84560763345607654150.00-23.62
CAediting_1038122chr15_45609232_+ENSG00000104164.9ENST00000568816hsa-miR-500a-5p45609230456092356mer4560921545609236145.00-20.01
CAediting_1038122chr15_45609232_+ENSG00000104164.9ENST00000568816hsa-miR-6749-3p45609227456092337mer-m84560921545609234150.00-23.29
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-10a-5p45609301456093077mer-m84560928745609308147.00-17.33
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-10b-5p45609301456093077mer-m84560928645609308147.00-16.76
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-339-5p45609300456093067mer-m84560928145609307155.00-20.82
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-3620-3p45609302456093098mer-1a4560928745609309150.00-18.95
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-6784-3p45609304456093118mer-1a4560929045609311140.00-16.26
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-6862-3p45609304456093118mer-1a4560928845609311152.00-18.40
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-6862-3p45609304456093118mer-1a4560928845609311152.00-18.40

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000567523hsa-miR-10399-5p45607514456075207mer-m84560750045607521144-11.88
CAediting_1038098chr15_45607520_+ENSG00000104164.9ENST00000567523hsa-miR-10399-5p45607514456075207mer-m84560750045607521144-11.88
CAediting_1038101chr15_45607597_+ENSG00000104164.9ENST00000567523hsa-miR-193b-5p45607594456076007mer-m84560758045607601142-20.42
CAediting_1038111chr15_45607679_+ENSG00000104164.9ENST00000567523hsa-miR-197645607676456076838mer-1a4560766345607683149-21.37
CAediting_1038100chr15_45607587_+ENSG00000104164.9ENST00000567523hsa-miR-4716-5p45607585456075917mer-m84560757145607592140-11.3
CAediting_1038105chr15_45607622_+ENSG00000104164.9ENST00000567523hsa-miR-4735-5p45607620456076267mer-m84560760645607627140-6.94
CAediting_1038106chr15_45607626_+ENSG00000104164.9ENST00000567523hsa-miR-4735-5p45607620456076267mer-m84560760645607627140-6.94
CAediting_1038100chr15_45607587_+ENSG00000104164.9ENST00000567523hsa-miR-4781-3p45607583456075897mer-m84560756945607590140-13.08
CAediting_1038098chr15_45607520_+ENSG00000104164.9ENST00000567523hsa-miR-5089-5p45607518456075258mer-1a4560750645607525146-13.81
CAediting_1038109chr15_45607662_+ENSG00000104164.9ENST00000567523hsa-miR-56245607658456076647mer-m84560764545607665151-14.2
CAediting_1038109chr15_45607662_+ENSG00000104164.9ENST00000567523hsa-miR-569745607659456076657mer-m84560764545607666146-18.01
CAediting_1038099chr15_45607526_+ENSG00000104164.9ENST00000567523hsa-miR-6513-5p45607519456075257mer-m84560750445607526152-16.65
CAediting_1038111chr15_45607679_+ENSG00000104164.9ENST00000567523hsa-miR-6747-3p45607674456076818mer-1a4560766045607681150-24.11
CAediting_1038096chr15_45607511_+ENSG00000104164.9ENST00000567523hsa-miR-6807-5p45607504456075107mer-m84560749045607511145-22.46
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000567523hsa-miR-7151-3p45607512456075198mer-1a4560750345607519146-17.62
CAediting_1038107chr15_45607652_+ENSG00000104164.9ENST00000567523hsa-miR-7151-3p45607645456076517mer-m84560763245607652140-22.22
CAediting_1038107chr15_45607652_+ENSG00000104164.9ENST00000567523hsa-miR-805245607651456076577mer-1a4560763745607657149-27.24
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000568816hsa-miR-10399-5p45607514456075207mer-m84560750045607521144-11.88
CAediting_1038098chr15_45607520_+ENSG00000104164.9ENST00000568816hsa-miR-10399-5p45607514456075207mer-m84560750045607521144-11.88
CAediting_1038119chr15_45609201_+ENSG00000104164.9ENST00000568816hsa-miR-10399-5p45609196456092027mer-m84560918245609203148-10.64
CAediting_1038120chr15_45609202_+ENSG00000104164.9ENST00000568816hsa-miR-10399-5p45609196456092027mer-m84560918245609203148-10.64
CAediting_1038122chr15_45609232_+ENSG00000104164.9ENST00000568816hsa-miR-141-5p45609228456092347mer-m84560921345609235150-13.94
CAediting_1038101chr15_45607597_+ENSG00000104164.9ENST00000568816hsa-miR-193b-5p45607594456076007mer-m84560758045607601142-20.42
CAediting_1038111chr15_45607679_+ENSG00000104164.9ENST00000568816hsa-miR-197645607676456076838mer-1a4560766345607683149-21.37
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-3664-5p45609301456093077mer-m84560928845609308148-12.94
CAediting_1038118chr15_45609195_+ENSG00000104164.9ENST00000568816hsa-miR-3934-5p45609192456091987mer-m84560917845609199146-20.64
CAediting_1038100chr15_45607587_+ENSG00000104164.9ENST00000568816hsa-miR-4716-5p45607585456075917mer-m84560757145607592140-11.3
CAediting_1038105chr15_45607622_+ENSG00000104164.9ENST00000568816hsa-miR-4735-5p45607620456076267mer-m84560760645607627140-6.94
CAediting_1038106chr15_45607626_+ENSG00000104164.9ENST00000568816hsa-miR-4735-5p45607620456076267mer-m84560760645607627140-6.94
CAediting_1038100chr15_45607587_+ENSG00000104164.9ENST00000568816hsa-miR-4781-3p45607583456075897mer-m84560756945607590140-13.08
CAediting_1038098chr15_45607520_+ENSG00000104164.9ENST00000568816hsa-miR-5089-5p45607518456075258mer-1a4560750645607525146-13.81
CAediting_1038120chr15_45609202_+ENSG00000104164.9ENST00000568816hsa-miR-5089-5p45609200456092067mer-m84560918545609207148-13.62
CAediting_1038118chr15_45609195_+ENSG00000104164.9ENST00000568816hsa-miR-552-3p45609193456092008mer-1a4560917845609200141-15.18
CAediting_1038109chr15_45607662_+ENSG00000104164.9ENST00000568816hsa-miR-56245607658456076647mer-m84560764545607665151-14.2
CAediting_1038109chr15_45607662_+ENSG00000104164.9ENST00000568816hsa-miR-569745607659456076657mer-m84560764545607666146-18.01
CAediting_1038119chr15_45609201_+ENSG00000104164.9ENST00000568816hsa-miR-6504-3p45609196456092027mer-m84560918245609203149-14.65
CAediting_1038120chr15_45609202_+ENSG00000104164.9ENST00000568816hsa-miR-6504-3p45609196456092027mer-m84560918245609203149-14.65
CAediting_1038099chr15_45607526_+ENSG00000104164.9ENST00000568816hsa-miR-6513-5p45607519456075257mer-m84560750445607526152-16.65
CAediting_1038111chr15_45607679_+ENSG00000104164.9ENST00000568816hsa-miR-6747-3p45607674456076818mer-1a4560766045607681150-24.11
CAediting_1038124chr15_45609306_+ENSG00000104164.9ENST00000568816hsa-miR-6794-3p45609303456093097mer-m84560929345609310142-15.31
CAediting_1038096chr15_45607511_+ENSG00000104164.9ENST00000568816hsa-miR-6807-5p45607504456075107mer-m84560749045607511145-22.46
CAediting_1038107chr15_45607652_+ENSG00000104164.9ENST00000568816hsa-miR-7151-3p45607645456076517mer-m84560763245607652140-22.22
CAediting_1038097chr15_45607519_+ENSG00000104164.9ENST00000568816hsa-miR-7151-3p45607512456075198mer-1a4560750345607519146-17.62
CAediting_1038107chr15_45607652_+ENSG00000104164.9ENST00000568816hsa-miR-805245607651456076577mer-1a4560763745607657149-27.24

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000104164.9ENST00000568816hsa-miR-605-3p45608323456083308mer-1a4560830845608330154-16.94
CAediting_980496chr14_31014685_-ENSG00000104164.9ENST00000568816hsa-miR-624-3p45609311456093177mer-m84560929845609318148-13.46
CAediting_1351755chr19_40282625_-ENSG00000104164.9ENST00000567461hsa-miR-64145606643456066486mer4560662245606649142-17.09
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000567461hsa-miR-561-3p45606796456068038mer-1a4560678345606803145-7.31
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000567461hsa-miR-561-3p45606856456068627mer-m84560684245606863166-14.72
CAediting_1229415chr17_67471547_+ENSG00000104164.9ENST00000567523hsa-miR-548aa45607322456073287mer-m84560730545607329150-13.34
CAediting_1351755chr19_40282625_-ENSG00000104164.9ENST00000567523hsa-miR-64145606643456066486mer4560662245606649142-17.09
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000567523hsa-miR-561-3p45606796456068038mer-1a4560678345606803145-7.31
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000567523hsa-miR-561-3p45606856456068627mer-m84560684245606863166-14.72
CAediting_1351755chr19_40282625_-ENSG00000104164.9ENST00000565216hsa-miR-64145606643456066486mer4560662245606649142-17.09
CAediting_1229415chr17_67471547_+ENSG00000104164.9ENST00000568816hsa-miR-548aa45607322456073287mer-m84560730545607329150-13.34
CAediting_1351755chr19_40282625_-ENSG00000104164.9ENST00000568816hsa-miR-64145606643456066486mer4560662245606649142-17.09
CAediting_117844chr1_162342605_+ENSG00000104164.9ENST00000568816hsa-miR-556-3p45608919456089257mer-m84560890445608926142-8.56
CAediting_1399425chr20_1392958_-ENSG00000104164.9ENST00000568816hsa-miR-6869-5p45608827456088337mer-m84560881345608834141-14.93
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000568816hsa-miR-561-3p45608737456087437mer-m84560871845608744141-8.22
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000568816hsa-miR-561-3p45606796456068038mer-1a4560678345606803145-7.31
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000568816hsa-miR-561-3p45606856456068627mer-m84560684245606863166-14.72
CAediting_442554chr5_154685830_+ENSG00000104164.9ENST00000568816hsa-miR-130345608028456080347mer-m84560801445608035150-16.1
CAediting_1351755chr19_40282625_-ENSG00000104164.9ENST00000564765hsa-miR-64145606643456066486mer4560662245606649142-17.09
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000564765hsa-miR-561-3p45606796456068038mer-1a4560678345606803145-7.31

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000104164.9ENST00000568816hsa-miR-200b-3p45608004456080118mer-1a4560799045608011147-9.58
CAediting_117844chr1_162342605_+ENSG00000104164.9ENST00000568816hsa-miR-556-3p45606897456069037mer-m84560688345606904149-8.37
CAediting_228905chr2_188297554_+ENSG00000104164.9ENST00000568816hsa-miR-561-3p45609137456091448mer-1a4560912445609144153-6.09
CAediting_748296chr10_51299626_+ENSG00000104164.9ENST00000568816hsa-miR-605-3p45608231456082377mer-m84560821845608238149-15.13

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for BLOC1S6

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for BLOC1S6

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for BLOC1S6

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for BLOC1S6

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for BLOC1S6

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for BLOC1S6

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
BLOC1S6C3280026HERMANSKY-PUDLAK SYNDROME 93GENOMICS_ENGLAND;ORPHANET
BLOC1S6C1844666Immune dysregulation1GENOMICS_ENGLAND