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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: B3GAT3 (CAeditome ID:26229)

Gene summary for B3GAT3

check button Gene summary
Gene informationGene symbol

B3GAT3

Gene ID

26229

Gene namebeta-1,3-glucuronyltransferase 3
SynonymsGLCATI|JDSCD|glcUAT-I
Cytomap

11q12.3

Type of geneprotein-coding
Descriptiongalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3Sqv-8-like proteinUDP-GlcUA:Gal beta-1,3-Gal-R glucuronyltransferasebeta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
Modification date20210518
UniProtAcc

O94766

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
B3GAT3

GO:0015012

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

21763480

B3GAT3

GO:0050650

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

21763480

B3GAT3

GO:0050651

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

21763480

B3GAT3

GO:0015020

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

25893793

B3GAT3

GO:0072542

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

24425863

B3GAT3

GO:0006024

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

24425863

B3GAT3

GO:0043085

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

24425863

B3GAT3

GO:0005794

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

21763480

B3GAT3

GO:0005801

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

21763480

B3GAT3

GO:0005801

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

25893793


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RNA A-to-I events for B3GAT3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000149541.8

check button RNA A-to-I editing events in Cancer.
CAediting_818415(62616054, -), CAediting_818416(62616062, -), CAediting_818417(62616076, -), CAediting_818418(62616079, -), CAediting_818419(62616122, -), CAediting_818420(62616132, -), CAediting_818421(62616187, -), CAediting_818422(62616218, -), CAediting_818423(62616242, -), CAediting_818424(62617605, -), CAediting_818425(62617621, -), CAediting_818426(62617630, -), CAediting_818427(62617640, -), CAediting_818428(62617649, -), CAediting_818429(62617653, -), CAediting_818430(62617654, -), CAediting_818431(62617665, -), CAediting_818432(62617690, -), CAediting_818433(62617709, -), CAediting_818434(62617733, -), CAediting_818435(62617737, -), CAediting_818436(62617739, -), CAediting_818437(62617753, -), CAediting_818438(62617755, -), CAediting_818439(62617760, -), CAediting_818440(62617765, -), CAediting_818441(62617777, -), CAediting_818442(62617801, -), CAediting_818443(62617814, -), CAediting_818444(62617825, -), CAediting_818445(62617838, -), CAediting_818446(62617858, -), CAediting_818447(62617874, -), CAediting_818448(62617931, -), CAediting_818449(62617932, -), CAediting_818450(62617946, -), CAediting_818451(62617959, -), CAediting_818452(62617964, -), CAediting_818453(62617965, -), CAediting_818454(62617971, -), CAediting_818455(62618010, -), CAediting_818456(62618012, -), CAediting_818457(62618013, -), CAediting_818458(62618019, -), CAediting_818459(62618053, -), CAediting_818460(62618055, -), CAediting_818461(62618065, -), CAediting_818462(62618077, -), CAediting_818463(62618094, -), CAediting_818464(62618130, -), CAediting_818465(62618133, -), CAediting_818466(62618406, -), CAediting_818467(62618418, -), CAediting_818468(62618419, -), CAediting_818469(62618473, -), CAediting_818470(62618481, -), CAediting_818471(62618518, -), CAediting_818472(62618538, -), CAediting_818473(62618540, -), CAediting_818474(62618550, -), CAediting_818475(62618599, -), CAediting_818476(62618657, -), CAediting_818477(62618727, -), CAediting_818478(62618739, -), CAediting_818479(62618740, -), CAediting_818480(62618758, -), CAediting_818481(62618799, -), CAediting_818482(62618802, -), CAediting_818483(62618816, -), CAediting_818484(62618843, -), CAediting_818485(62618855, -), CAediting_818486(62618859, -), CAediting_818487(62618861, -), CAediting_818488(62618871, -), CAediting_818489(62618874, -), CAediting_818490(62618883, -), CAediting_818491(62618896, -), CAediting_818492(62618900, -), CAediting_818493(62618901, -), CAediting_818494(62618914, -), CAediting_818495(62618939, -), CAediting_818496(62619011, -), CAediting_818497(62619029, -), CAediting_818498(62619039, -), CAediting_818499(62619042, -), CAediting_818500(62619051, -), CAediting_818501(62619068, -), CAediting_818502(62619069, -), CAediting_818503(62619082, -), CAediting_818504(62619088, -), CAediting_818505(62619094, -), CAediting_818506(62619149, -), CAediting_818507(62619562, -), CAediting_818508(62619578, -), CAediting_818509(62619594, -), CAediting_818510(62619629, -), CAediting_818511(62619639, -), CAediting_818512(62619640, -), CAediting_818513(62619647, -), CAediting_818514(62619660, -), CAediting_818515(62619669, -), CAediting_818516(62619670, -), CAediting_818517(62619685, -), CAediting_818518(62619692, -), CAediting_818519(62619696, -), CAediting_818520(62619703, -), CAediting_818521(62619704, -), CAediting_818522(62619706, -), CAediting_818523(62619708, -), CAediting_818524(62619709, -), CAediting_818525(62619712, -), CAediting_818526(62619713, -), CAediting_818527(62619717, -), CAediting_818528(62619737, -), CAediting_818529(62619738, -), CAediting_818530(62619747, -), CAediting_818531(62619760, -), CAediting_818532(62619762, -), CAediting_818533(62619768, -), CAediting_818534(62619771, -), CAediting_818535(62619794, -), CAediting_818536(62619808, -), CAediting_818537(62619811, -), CAediting_818538(62619816, -), CAediting_818539(62619817, -), CAediting_818540(62619825, -), CAediting_818541(62619850, -), CAediting_818542(62620021, -), CAediting_818543(62620052, -), CAediting_818544(62620058, -), CAediting_818545(62620059, -), CAediting_818546(62620062, -), CAediting_818547(62620091, -), CAediting_818548(62620096, -), CAediting_818549(62620113, -), CAediting_818550(62620115, -), CAediting_818551(62620120, -), CAediting_818552(62620121, -), CAediting_818553(62620135, -), CAediting_818554(62620156, -), CAediting_818555(62620161, -), CAediting_818556(62620162, -), CAediting_818557(62620164, -), CAediting_818558(62620188, -),

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RNA editing positional annotations for B3GAT3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_818422chr11_62616218_-nonsynonymous SNVENST00000531383.4c.A928Gp.R310GD.D
CAediting_818422chr11_62616218_-nonsynonymous SNVENST00000534026.4c.A932Gp.Q311RD.D

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_818415chr11_62616054_-UTR3
CAediting_818416chr11_62616062_-UTR3
CAediting_818417chr11_62616076_-UTR3
CAediting_818418chr11_62616079_-UTR3
CAediting_818419chr11_62616122_-UTR3
CAediting_818420chr11_62616132_-UTR3
CAediting_818421chr11_62616187_-exonic
CAediting_818422chr11_62616218_-exonic
CAediting_818423chr11_62616242_-splicing
CAediting_818424chr11_62617605_-intronic
CAediting_818425chr11_62617621_-intronic
CAediting_818426chr11_62617630_-intronic
CAediting_818427chr11_62617640_-intronic
CAediting_818428chr11_62617649_-intronic
CAediting_818429chr11_62617653_-intronic
CAediting_818430chr11_62617654_-intronic
CAediting_818431chr11_62617665_-intronic
CAediting_818432chr11_62617690_-intronic
CAediting_818433chr11_62617709_-intronic
CAediting_818434chr11_62617733_-intronic
CAediting_818435chr11_62617737_-intronic
CAediting_818436chr11_62617739_-intronic
CAediting_818437chr11_62617753_-intronic
CAediting_818438chr11_62617755_-intronic
CAediting_818439chr11_62617760_-intronic
CAediting_818440chr11_62617765_-intronic
CAediting_818441chr11_62617777_-intronic
CAediting_818442chr11_62617801_-intronic
CAediting_818443chr11_62617814_-intronic
CAediting_818444chr11_62617825_-intronic
CAediting_818445chr11_62617838_-intronic
CAediting_818446chr11_62617858_-intronic
CAediting_818447chr11_62617874_-intronic
CAediting_818448chr11_62617931_-intronic
CAediting_818449chr11_62617932_-intronic
CAediting_818450chr11_62617946_-intronic
CAediting_818451chr11_62617959_-intronic
CAediting_818452chr11_62617964_-intronic
CAediting_818453chr11_62617965_-intronic
CAediting_818454chr11_62617971_-intronic
CAediting_818455chr11_62618010_-intronic
CAediting_818456chr11_62618012_-intronic
CAediting_818457chr11_62618013_-intronic
CAediting_818458chr11_62618019_-intronic
CAediting_818459chr11_62618053_-intronic
CAediting_818460chr11_62618055_-intronic
CAediting_818461chr11_62618065_-intronic
CAediting_818462chr11_62618077_-intronic
CAediting_818463chr11_62618094_-intronic
CAediting_818464chr11_62618130_-intronic
CAediting_818465chr11_62618133_-intronic
CAediting_818466chr11_62618406_-intronic
CAediting_818467chr11_62618418_-intronic
CAediting_818468chr11_62618419_-intronic
CAediting_818469chr11_62618473_-intronic
CAediting_818470chr11_62618481_-intronic
CAediting_818471chr11_62618518_-intronic
CAediting_818472chr11_62618538_-intronic
CAediting_818473chr11_62618540_-intronic
CAediting_818474chr11_62618550_-intronic
CAediting_818475chr11_62618599_-intronic
CAediting_818476chr11_62618657_-intronic
CAediting_818477chr11_62618727_-intronic
CAediting_818478chr11_62618739_-intronic
CAediting_818479chr11_62618740_-intronic
CAediting_818480chr11_62618758_-intronic
CAediting_818481chr11_62618799_-intronic
CAediting_818482chr11_62618802_-intronic
CAediting_818483chr11_62618816_-intronic
CAediting_818484chr11_62618843_-intronic
CAediting_818485chr11_62618855_-intronic
CAediting_818486chr11_62618859_-intronic
CAediting_818487chr11_62618861_-intronic
CAediting_818488chr11_62618871_-intronic
CAediting_818489chr11_62618874_-intronic
CAediting_818490chr11_62618883_-intronic
CAediting_818491chr11_62618896_-intronic
CAediting_818492chr11_62618900_-intronic
CAediting_818493chr11_62618901_-intronic
CAediting_818494chr11_62618914_-intronic
CAediting_818495chr11_62618939_-intronic
CAediting_818496chr11_62619011_-intronic
CAediting_818497chr11_62619029_-intronic
CAediting_818498chr11_62619039_-intronic
CAediting_818499chr11_62619042_-intronic
CAediting_818500chr11_62619051_-intronic
CAediting_818501chr11_62619068_-intronic
CAediting_818502chr11_62619069_-intronic
CAediting_818503chr11_62619082_-intronic
CAediting_818504chr11_62619088_-intronic
CAediting_818505chr11_62619094_-intronic
CAediting_818506chr11_62619149_-intronic
CAediting_818507chr11_62619562_-intronic
CAediting_818508chr11_62619578_-intronic
CAediting_818509chr11_62619594_-intronic
CAediting_818510chr11_62619629_-intronic
CAediting_818511chr11_62619639_-intronic
CAediting_818512chr11_62619640_-intronic
CAediting_818513chr11_62619647_-intronic
CAediting_818514chr11_62619660_-intronic
CAediting_818515chr11_62619669_-intronic
CAediting_818516chr11_62619670_-intronic
CAediting_818517chr11_62619685_-intronic
CAediting_818518chr11_62619692_-intronic
CAediting_818519chr11_62619696_-intronic
CAediting_818520chr11_62619703_-intronic
CAediting_818521chr11_62619704_-intronic
CAediting_818522chr11_62619706_-intronic
CAediting_818523chr11_62619708_-intronic
CAediting_818524chr11_62619709_-intronic
CAediting_818525chr11_62619712_-intronic
CAediting_818526chr11_62619713_-intronic
CAediting_818527chr11_62619717_-intronic
CAediting_818528chr11_62619737_-intronic
CAediting_818529chr11_62619738_-intronic
CAediting_818530chr11_62619747_-intronic
CAediting_818531chr11_62619760_-intronic
CAediting_818532chr11_62619762_-intronic
CAediting_818533chr11_62619768_-intronic
CAediting_818534chr11_62619771_-intronic
CAediting_818535chr11_62619794_-intronic
CAediting_818536chr11_62619808_-intronic
CAediting_818537chr11_62619811_-intronic
CAediting_818538chr11_62619816_-intronic
CAediting_818539chr11_62619817_-intronic
CAediting_818540chr11_62619825_-intronic
CAediting_818541chr11_62619850_-intronic
CAediting_818542chr11_62620021_-intronic
CAediting_818543chr11_62620052_-intronic
CAediting_818544chr11_62620058_-intronic
CAediting_818545chr11_62620059_-intronic
CAediting_818546chr11_62620062_-intronic
CAediting_818547chr11_62620091_-intronic
CAediting_818548chr11_62620096_-intronic
CAediting_818549chr11_62620113_-intronic
CAediting_818550chr11_62620115_-intronic
CAediting_818551chr11_62620120_-intronic
CAediting_818552chr11_62620121_-intronic
CAediting_818553chr11_62620135_-intronic
CAediting_818554chr11_62620156_-intronic
CAediting_818555chr11_62620161_-intronic
CAediting_818556chr11_62620162_-intronic
CAediting_818557chr11_62620164_-intronic
CAediting_818558chr11_62620188_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_818415chr11_62616054_-SINEAluAluY
CAediting_818416chr11_62616062_-SINEAluAluY
CAediting_818417chr11_62616076_-SINEAluAluY
CAediting_818418chr11_62616079_-SINEAluAluY
CAediting_818419chr11_62616122_-SINEAluAluY
CAediting_818420chr11_62616132_-SINEAluAluY
CAediting_818421chr11_62616187_-SINEAluAluY
CAediting_818422chr11_62616218_-SINEAluAluY
CAediting_818423chr11_62616242_-SINEAluAluY
CAediting_818424chr11_62617605_-SINEAluAluSq2
CAediting_818425chr11_62617621_-SINEAluAluSq2
CAediting_818426chr11_62617630_-SINEAluAluSq2
CAediting_818427chr11_62617640_-SINEAluAluSq2
CAediting_818428chr11_62617649_-SINEAluAluSq2
CAediting_818429chr11_62617653_-SINEAluAluSq2
CAediting_818430chr11_62617654_-SINEAluAluSq2
CAediting_818431chr11_62617665_-SINEAluAluSq2
CAediting_818432chr11_62617690_-SINEAluAluSq2
CAediting_818433chr11_62617709_-SINEAluAluSq2
CAediting_818434chr11_62617733_-SINEAluAluSq2
CAediting_818435chr11_62617737_-SINEAluAluSq2
CAediting_818436chr11_62617739_-SINEAluAluSq2
CAediting_818437chr11_62617753_-SINEAluAluSq2
CAediting_818438chr11_62617755_-SINEAluAluSq2
CAediting_818439chr11_62617760_-SINEAluAluSq2
CAediting_818440chr11_62617765_-SINEAluAluSq2
CAediting_818441chr11_62617777_-SINEAluAluSq2
CAediting_818442chr11_62617801_-SINEAluAluSq2
CAediting_818443chr11_62617814_-SINEAluAluSq2
CAediting_818444chr11_62617825_-SINEAluAluSq2
CAediting_818445chr11_62617838_-SINEAluAluSq2
CAediting_818446chr11_62617858_-SINEAluAluSq2
CAediting_818447chr11_62617874_-SINEAluAluSq2
CAediting_818448chr11_62617931_-SINEAluAluSq2
CAediting_818449chr11_62617932_-SINEAluAluSq2
CAediting_818450chr11_62617946_-SINEAluAluSq2
CAediting_818451chr11_62617959_-SINEAluAluSq2
CAediting_818452chr11_62617964_-SINEAluAluSq2
CAediting_818453chr11_62617965_-SINEAluAluSq2
CAediting_818454chr11_62617971_-SINEAluAluSq2
CAediting_818455chr11_62618010_-SINEAluAluSq2
CAediting_818456chr11_62618012_-SINEAluAluSq2
CAediting_818457chr11_62618013_-SINEAluAluSq2
CAediting_818458chr11_62618019_-SINEAluAluSq2
CAediting_818459chr11_62618053_-SINEAluAluSq2
CAediting_818460chr11_62618055_-SINEAluAluSq2
CAediting_818461chr11_62618065_-SINEAluAluSq2
CAediting_818462chr11_62618077_-SINEAluAluSq2
CAediting_818463chr11_62618094_-SINEAluAluSq2
CAediting_818464chr11_62618130_-SINEAluAluSq2
CAediting_818465chr11_62618133_-SINEAluAluSq2
CAediting_818466chr11_62618406_-SINEAluAluY
CAediting_818467chr11_62618418_-SINEAluAluY
CAediting_818468chr11_62618419_-SINEAluAluY
CAediting_818469chr11_62618473_-SINEAluAluY
CAediting_818470chr11_62618481_-SINEAluAluY
CAediting_818471chr11_62618518_-SINEAluAluY
CAediting_818472chr11_62618538_-SINEAluAluY
CAediting_818473chr11_62618540_-SINEAluAluY
CAediting_818474chr11_62618550_-SINEAluAluY
CAediting_818475chr11_62618599_-SINEAluAluY
CAediting_818476chr11_62618657_-SINEAluAluY
CAediting_818477chr11_62618727_-SINEAluAluSx3
CAediting_818478chr11_62618739_-SINEAluAluSx3
CAediting_818479chr11_62618740_-SINEAluAluSx3
CAediting_818480chr11_62618758_-SINEAluAluSx3
CAediting_818481chr11_62618799_-SINEAluAluSx3
CAediting_818482chr11_62618802_-SINEAluAluSx3
CAediting_818483chr11_62618816_-SINEAluAluSx3
CAediting_818484chr11_62618843_-SINEAluAluSx3
CAediting_818485chr11_62618855_-SINEAluAluSx3
CAediting_818486chr11_62618859_-SINEAluAluSx3
CAediting_818487chr11_62618861_-SINEAluAluSx3
CAediting_818488chr11_62618871_-SINEAluAluSx3
CAediting_818489chr11_62618874_-SINEAluAluSx3
CAediting_818490chr11_62618883_-SINEAluAluSx3
CAediting_818491chr11_62618896_-SINEAluAluSx3
CAediting_818492chr11_62618900_-SINEAluAluSx3
CAediting_818493chr11_62618901_-SINEAluAluSx3
CAediting_818494chr11_62618914_-SINEAluAluSx3
CAediting_818495chr11_62618939_-SINEAluAluSx3
CAediting_818496chr11_62619011_-SINEAluAluSx3
CAediting_818497chr11_62619029_-SINEAluAluSx3
CAediting_818498chr11_62619039_-SINEAluAluSx3
CAediting_818499chr11_62619042_-SINEAluAluSx3
CAediting_818500chr11_62619051_-SINEAluAluSx3
CAediting_818501chr11_62619068_-SINEAluAluSx3
CAediting_818502chr11_62619069_-SINEAluAluSx3
CAediting_818503chr11_62619082_-SINEAluAluSx3
CAediting_818504chr11_62619088_-SINEAluAluSx3
CAediting_818505chr11_62619094_-SINEAluAluSx3
CAediting_818506chr11_62619149_-SINEAluAluSx3
CAediting_818507chr11_62619562_-SINEAluAluSx
CAediting_818508chr11_62619578_-SINEAluAluSx
CAediting_818509chr11_62619594_-SINEAluAluSx
CAediting_818510chr11_62619629_-SINEAluAluSx
CAediting_818511chr11_62619639_-SINEAluAluSx
CAediting_818512chr11_62619640_-SINEAluAluSx
CAediting_818513chr11_62619647_-SINEAluAluSx
CAediting_818514chr11_62619660_-SINEAluAluSx
CAediting_818515chr11_62619669_-SINEAluAluSx
CAediting_818516chr11_62619670_-SINEAluAluSx
CAediting_818517chr11_62619685_-SINEAluAluSx
CAediting_818518chr11_62619692_-SINEAluAluSx
CAediting_818519chr11_62619696_-SINEAluAluSx
CAediting_818520chr11_62619703_-Simple_repeatSimple_repeat(T)n
CAediting_818521chr11_62619704_-Simple_repeatSimple_repeat(T)n
CAediting_818522chr11_62619706_-Simple_repeatSimple_repeat(T)n
CAediting_818523chr11_62619708_-Simple_repeatSimple_repeat(T)n
CAediting_818524chr11_62619709_-Simple_repeatSimple_repeat(T)n
CAediting_818525chr11_62619712_-Simple_repeatSimple_repeat(T)n
CAediting_818526chr11_62619713_-Simple_repeatSimple_repeat(T)n
CAediting_818527chr11_62619717_-Simple_repeatSimple_repeat(T)n
CAediting_818528chr11_62619737_-SINEAluAluSx
CAediting_818529chr11_62619738_-SINEAluAluSx
CAediting_818530chr11_62619747_-SINEAluAluSx
CAediting_818531chr11_62619760_-SINEAluAluSx
CAediting_818532chr11_62619762_-SINEAluAluSx
CAediting_818533chr11_62619768_-SINEAluAluSx
CAediting_818534chr11_62619771_-SINEAluAluSx
CAediting_818535chr11_62619794_-SINEAluAluSx
CAediting_818536chr11_62619808_-SINEAluAluSx
CAediting_818537chr11_62619811_-SINEAluAluSx
CAediting_818538chr11_62619816_-SINEAluAluSx
CAediting_818539chr11_62619817_-SINEAluAluSx
CAediting_818540chr11_62619825_-SINEAluAluSx
CAediting_818542chr11_62620021_-SINEAluAluSq2
CAediting_818543chr11_62620052_-SINEAluAluSq2
CAediting_818544chr11_62620058_-SINEAluAluSq2
CAediting_818545chr11_62620059_-SINEAluAluSq2
CAediting_818546chr11_62620062_-SINEAluAluSq2
CAediting_818547chr11_62620091_-SINEAluAluSq2
CAediting_818548chr11_62620096_-SINEAluAluSq2
CAediting_818549chr11_62620113_-SINEAluAluSq2
CAediting_818550chr11_62620115_-SINEAluAluSq2
CAediting_818551chr11_62620120_-SINEAluAluSq2
CAediting_818552chr11_62620121_-SINEAluAluSq2
CAediting_818553chr11_62620135_-SINEAluAluSq2
CAediting_818554chr11_62620156_-SINEAluAluSq2
CAediting_818555chr11_62620161_-SINEAluAluSq2
CAediting_818556chr11_62620162_-SINEAluAluSq2
CAediting_818557chr11_62620164_-SINEAluAluSq2
CAediting_818558chr11_62620188_-SINEAluAluSq2

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RNA A-to-I editing events in the alternative splicing sites for B3GAT3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000149541.8.B3GAT3.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000149541.8.B3GAT3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for B3GAT3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for B3GAT3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for B3GAT3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_818415chr11_62616054_-ENSG00000149541.8ENST00000531383hsa-miR-3190-5p62616049626160557mer-m86261604862616067155.00-22.56
CAediting_818415chr11_62616054_-ENSG00000149541.8ENST00000531383hsa-miR-548s62616050626160567mer-m86261604962616071153.00-17.10
CAediting_818417chr11_62616076_-ENSG00000149541.8ENST00000531383hsa-miR-197-3p62616072626160787mer-m86261607162616092140.00-12.50
CAediting_818417chr11_62616076_-ENSG00000149541.8ENST00000534026hsa-miR-197-3p62616072626160787mer-m86261607162616092140.00-12.50
CAediting_818419chr11_62616122_-ENSG00000149541.8ENST00000531383hsa-miR-17-3p62616119626161257mer-m86261611862616140158.00-20.42
CAediting_818419chr11_62616122_-ENSG00000149541.8ENST00000534026hsa-miR-17-3p62616119626161257mer-m86261611862616140158.00-20.42
CAediting_818420chr11_62616132_-ENSG00000149541.8ENST00000531383hsa-miR-3614-5p62616132626161387mer-m86261613162616154152.00-25.27
CAediting_818420chr11_62616132_-ENSG00000149541.8ENST00000531383hsa-miR-4691-3p62616128626161347mer-m86261612762616154150.00-26.36
CAediting_818420chr11_62616132_-ENSG00000149541.8ENST00000534026hsa-miR-3614-5p62616132626161387mer-m86261613162616154152.00-25.27
CAediting_818420chr11_62616132_-ENSG00000149541.8ENST00000534026hsa-miR-4691-3p62616128626161347mer-m86261612762616154150.00-26.36

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_818415chr11_62616054_-ENSG00000149541.8ENST00000531383hsa-miR-479462616049626160557mer-m86261604862616070155-20.92
CAediting_818420chr11_62616132_-ENSG00000149541.8ENST00000531383hsa-miR-569062616128626161347mer-m86261612762616147145-16.74
CAediting_818415chr11_62616054_-ENSG00000149541.8ENST00000531383hsa-miR-664a-5p62616049626160557mer-m86261604862616071141-15.06
CAediting_818420chr11_62616132_-ENSG00000149541.8ENST00000534026hsa-miR-569062616128626161347mer-m86261612762616147145-16.74

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_86358chr1_109598906_+ENSG00000149541.8ENST00000531383hsa-miR-197-5p62615925626159317mer-m86261592462615949160-26.06
CAediting_580943chr7_100356700_+ENSG00000149541.8ENST00000531383hsa-miR-6840-3p62616166626161716mer6261616562616185144-27.77
CAediting_580943chr7_100356700_+ENSG00000149541.8ENST00000534026hsa-miR-6840-3p62616166626161727mer-m86261616562616186144-27.77
CAediting_468389chr6_31355314_-ENSG00000149541.8ENST00000532585hsa-miR-6891-5p62617212626172187mer-m86261721162617230144-22.12

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000149541.8ENST00000265471hsa-miR-624-3p62615654626156607mer-m86261565362615673146-16.92
CAediting_1229413chr17_67471544_+ENSG00000149541.8ENST00000531383hsa-miR-548aa62615618626156247mer-m86261561762615638153-14.94
CAediting_980496chr14_31014685_-ENSG00000149541.8ENST00000531383hsa-miR-624-3p62615654626156607mer-m86261565362615673146-16.92
CAediting_980496chr14_31014685_-ENSG00000149541.8ENST00000532585hsa-miR-624-3p62616549626165557mer-m86261654862616568140-14.76
CAediting_980496chr14_31014685_-ENSG00000149541.8ENST00000532585hsa-miR-624-3p62615654626156607mer-m86261565362615673146-16.92

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for B3GAT3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for B3GAT3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
OVCAediting_818510chr11_62619629_-0.04217845554075930.173853293336375....
ESCACAediting_818515chr11_62619669_-0.01312430886330320.274546873213283....
LAMLCAediting_818516chr11_62619670_-..0.0343193469583540.296981738059388..

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Relation with cancer stages for B3GAT3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for B3GAT3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for B3GAT3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for B3GAT3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
B3GAT3C3278404MULTIPLE JOINT DISLOCATIONS, SHORT STATURE, AND CRANIOFACIAL DYSMORPHISM WITH OR WITHOUT CONGENITAL HEART DEFECTS6CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
B3GAT3C0376634Craniofacial Abnormalities1CTD_human