|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: DGCR5 (CAeditome ID:26220) |
Gene summary for DGCR5 |
Gene summary |
Gene information | Gene symbol | DGCR5 | Gene ID | 26220 |
Gene name | DiGeorge syndrome critical region gene 5 | |
Synonyms | DGCR10|DGCR9|DGS-A|DGS-B|LINC00037|NCRNA00037|POM121L5P | |
Cytomap | 22q11.21 | |
Type of gene | ncRNA | |
Description | DiGeorge syndrome critical region gene 10 (non-protein coding)DiGeorge syndrome critical region gene 5 (non-protein coding)DiGeorge syndrome critical region gene 9 (non-protein coding)DiGeorge syndrome gene ADiGeorge syndrome gene Bcadherin EGF LAG s | |
Modification date | 20210518 | |
UniProtAcc | . | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for DGCR5 |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000237517.7 |
RNA A-to-I editing events in Cancer. |
CAediting_1459991(18976756, +), CAediting_1459992(18976851, +), CAediting_1459993(18976854, +), CAediting_1459994(18976889, +), CAediting_1459995(18976914, +), CAediting_1459996(18977413, +), CAediting_1459997(18980382, +), CAediting_1459998(18980389, +), CAediting_1459999(18981545, +), CAediting_1460000(18981548, +), CAediting_1460001(18981551, +), CAediting_1460002(18981566, +), CAediting_1460003(18981579, +), CAediting_1460004(18981587, +), CAediting_1460005(18981590, +), CAediting_1460006(18981599, +), CAediting_1460007(18981604, +), CAediting_1460008(18981706, +), CAediting_1460009(18981719, +), CAediting_1460010(18981747, +), CAediting_1460011(18981748, +), CAediting_1460012(18981750, +), CAediting_1460013(18981759, +), CAediting_1460014(18981955, +), CAediting_1460015(18982157, +), CAediting_1460016(18982181, +), CAediting_1460017(18982235, +), CAediting_1460018(18982236, +), CAediting_1460019(18982298, +), CAediting_1460020(18982302, +), CAediting_1460021(18982319, +), CAediting_1460022(18982363, +), CAediting_1460023(18982456, +), CAediting_1460024(18982603, +), CAediting_1460025(18983859, +), CAediting_1460026(18983871, +), CAediting_1460027(18983881, +), CAediting_1460028(18985389, +), CAediting_1460029(18985397, +), CAediting_1460030(18985405, +), CAediting_1460031(18985406, +), CAediting_1460032(18985432, +), CAediting_1460033(18985544, +), CAediting_1460034(18985545, +), CAediting_1460035(18985550, +), CAediting_1460036(18985554, +), CAediting_1460037(18985611, +), CAediting_1460038(18985621, +), CAediting_1460039(18986223, +), CAediting_1460040(18986257, +), CAediting_1460041(18986318, +), CAediting_1460042(18987132, +), CAediting_1460043(18987212, +), CAediting_1460044(18987564, +), CAediting_1460045(18987738, +), CAediting_1460046(18988382, +), CAediting_1460047(18988445, +), CAediting_1460048(18988450, +), CAediting_1460049(18988666, +), CAediting_1460050(18988667, +), CAediting_1460051(18988668, +), CAediting_1460052(18988747, +), CAediting_1460053(18988762, +), CAediting_1460054(18988895, +), CAediting_1460055(18989013, +), CAediting_1460056(18989114, +), CAediting_1460057(18989146, +), CAediting_1460058(18989686, +), CAediting_1460059(18989696, +), CAediting_1460060(18989709, +), CAediting_1460061(18989723, +), CAediting_1460062(18989738, +), CAediting_1460063(18989741, +), CAediting_1460064(18989755, +), CAediting_1460065(18989763, +), CAediting_1460066(18989767, +), CAediting_1460067(18989770, +), CAediting_1460068(18989808, +), CAediting_1460069(18989817, +), CAediting_1460070(18989818, +), CAediting_1460071(18989830, +), CAediting_1460072(18990330, +), CAediting_1460073(18995932, +), CAediting_1460074(18995944, +), CAediting_1460075(18995951, +), CAediting_1460076(18995968, +), CAediting_1460077(18995969, +), CAediting_1460078(18995988, +), CAediting_1460079(18995989, +), CAediting_1460080(18995993, +), CAediting_1460081(18996014, +), CAediting_1460082(18996015, +), CAediting_1460083(18996018, +), CAediting_1460084(18996028, +), CAediting_1460085(18996041, +), CAediting_1460086(18996050, +), CAediting_1460087(18996054, +), CAediting_1460088(18996069, +), CAediting_1460089(18996072, +), CAediting_1460090(18996074, +), CAediting_1460091(18996086, +), CAediting_1460092(18996098, +), CAediting_1460093(18996109, +), CAediting_1460094(18996151, +), CAediting_1460095(18996160, +), CAediting_1460096(18996163, +), CAediting_1460097(18996218, +), CAediting_1460098(18996254, +), CAediting_1460099(18996260, +), CAediting_1460100(18996261, +), CAediting_1460101(18996296, +), CAediting_1460102(18996309, +), CAediting_1460103(18996320, +), CAediting_1460104(18996330, +), CAediting_1460105(18996339, +), CAediting_1460106(18996355, +), CAediting_1460107(18996395, +), CAediting_1460108(18996401, +), CAediting_1460109(18996405, +), CAediting_1460110(18996436, +), CAediting_1460111(18996448, +), CAediting_1460112(18996450, +), CAediting_1460113(18996466, +), CAediting_1460114(18998406, +), CAediting_1460115(18998691, +), CAediting_1460116(18998734, +), CAediting_1460117(18998772, +), CAediting_1460118(18998794, +), CAediting_1460119(18998835, +), CAediting_1460120(18998844, +), CAediting_1460121(18998896, +), CAediting_1460122(18998899, +), CAediting_1460123(18998900, +), CAediting_1460124(18999625, +), CAediting_1460125(18999632, +), CAediting_1460126(18999667, +), CAediting_1460127(18999678, +), CAediting_1460128(19001247, +), CAediting_1460129(19001275, +), CAediting_1460130(19001292, +), CAediting_1460131(19001296, +), CAediting_1460132(19001353, +), CAediting_1460133(19001367, +), CAediting_1460134(19001370, +), CAediting_1460135(19001379, +), CAediting_1460136(19002038, +), CAediting_1460137(19002051, +), CAediting_1460138(19002059, +), CAediting_1460139(19002179, +), CAediting_1460140(19004327, +), CAediting_1460141(19004343, +), CAediting_1460142(19004345, +), CAediting_1460143(19004351, +), CAediting_1460144(19004873, +), CAediting_1460145(19004880, +), CAediting_1460146(19005417, +), CAediting_1460147(19006376, +), CAediting_1460148(19007526, +), CAediting_1460149(19007564, +), CAediting_1460150(19007567, +), CAediting_1460151(19008204, +), CAediting_1460152(19008687, +), CAediting_1460153(19011711, +), CAediting_1460154(19011712, +), CAediting_1460155(19011751, +), CAediting_1460156(19011790, +), CAediting_1460157(19013989, +), CAediting_1460158(19013990, +), CAediting_1460159(19014020, +), CAediting_1460160(19014061, +), CAediting_1460161(19015237, +), CAediting_1460162(19015240, +), CAediting_1460163(19015246, +), CAediting_1460164(19015252, +), CAediting_1460165(19015253, +), CAediting_1460166(19015260, +), CAediting_1460167(19015265, +), CAediting_1460168(19015293, +), CAediting_1460169(19015305, +), CAediting_1460170(19015363, +), CAediting_1460171(19015367, +), CAediting_1460172(19015369, +), CAediting_1460173(19015384, +), CAediting_1460174(19015389, +), CAediting_1460175(19015396, +), CAediting_1460176(19015400, +), CAediting_1460177(19015415, +), CAediting_1460178(19015423, +), CAediting_1460179(19015424, +), CAediting_1460180(19015659, +), CAediting_1460181(19015701, +), CAediting_1460182(19015755, +), CAediting_1460183(19015756, +), CAediting_1460184(19015768, +), CAediting_1460185(19015794, +), CAediting_1460186(19015835, +), CAediting_1460187(19016193, +), CAediting_1460188(19016256, +), CAediting_1460189(19016426, +), CAediting_1460190(19016479, +), CAediting_1460191(19016658, +), CAediting_1460192(19016671, +), CAediting_1460193(19016740, +), CAediting_1460194(19016766, +), CAediting_1460195(19017015, +), CAediting_1460196(19017036, +), CAediting_1460197(19017039, +), CAediting_1460198(19017041, +), CAediting_1460199(19017042, +), CAediting_1460200(19017054, +), CAediting_1460201(19017107, +), CAediting_1460202(19017108, +), CAediting_1460203(19017128, +), CAediting_1460204(19020931, +), CAediting_1460205(19020937, +), CAediting_1460206(19020944, +), CAediting_1460207(19021030, +), CAediting_1460208(19021070, +), CAediting_1460209(19021109, +), CAediting_1460210(19021356, +), CAediting_1460211(19021376, +), CAediting_1460212(19021377, +), CAediting_1460213(19021382, +), CAediting_1460214(19021445, +), CAediting_1460215(19021452, +), CAediting_1460216(19021492, +), CAediting_1460217(19021532, +), CAediting_1460218(19021533, +), CAediting_1460219(19021546, +), CAediting_1460220(19021573, +), CAediting_1460221(19021574, +), CAediting_1460222(19021981, +), CAediting_1460223(19021982, +), CAediting_1460224(19021989, +), CAediting_1460225(19021990, +), CAediting_1460226(19021995, +), CAediting_1460227(19022103, +), CAediting_1460228(19022142, +), CAediting_1460229(19022149, +), CAediting_1460230(19022177, +), CAediting_1460231(19022184, +), CAediting_1460232(19022197, +), CAediting_1460233(19022257, +), CAediting_1460234(19022466, +), CAediting_1460235(19022476, +), CAediting_1460236(19022517, +), CAediting_1460237(19022520, +), CAediting_1460238(19022526, +), CAediting_1460239(19022534, +), CAediting_1460240(19022546, +), CAediting_1460241(19022575, +), CAediting_1460242(19022584, +), CAediting_1460243(19022589, +), CAediting_1460244(19022597, +), CAediting_1460245(19022598, +), CAediting_1460246(19022599, +), CAediting_1460247(19022611, +), CAediting_1460248(19022613, +), CAediting_1460249(19022620, +), CAediting_1460250(19024260, +), CAediting_1460251(19024311, +), CAediting_1460252(19028669, +), |
Top |
RNA editing positional annotations for DGCR5 using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_1459991 | chr22_18976756_+ | ncRNA_intronic |
CAediting_1459992 | chr22_18976851_+ | ncRNA_intronic |
CAediting_1459993 | chr22_18976854_+ | ncRNA_intronic |
CAediting_1459994 | chr22_18976889_+ | ncRNA_intronic |
CAediting_1459995 | chr22_18976914_+ | ncRNA_intronic |
CAediting_1459996 | chr22_18977413_+ | ncRNA_intronic |
CAediting_1459997 | chr22_18980382_+ | ncRNA_intronic |
CAediting_1459998 | chr22_18980389_+ | ncRNA_intronic |
CAediting_1459999 | chr22_18981545_+ | ncRNA_intronic |
CAediting_1460000 | chr22_18981548_+ | ncRNA_intronic |
CAediting_1460001 | chr22_18981551_+ | ncRNA_intronic |
CAediting_1460002 | chr22_18981566_+ | ncRNA_intronic |
CAediting_1460003 | chr22_18981579_+ | ncRNA_intronic |
CAediting_1460004 | chr22_18981587_+ | ncRNA_intronic |
CAediting_1460005 | chr22_18981590_+ | ncRNA_intronic |
CAediting_1460006 | chr22_18981599_+ | ncRNA_intronic |
CAediting_1460007 | chr22_18981604_+ | ncRNA_intronic |
CAediting_1460008 | chr22_18981706_+ | ncRNA_intronic |
CAediting_1460009 | chr22_18981719_+ | ncRNA_intronic |
CAediting_1460010 | chr22_18981747_+ | ncRNA_intronic |
CAediting_1460011 | chr22_18981748_+ | ncRNA_intronic |
CAediting_1460012 | chr22_18981750_+ | ncRNA_intronic |
CAediting_1460013 | chr22_18981759_+ | ncRNA_intronic |
CAediting_1460014 | chr22_18981955_+ | ncRNA_intronic |
CAediting_1460015 | chr22_18982157_+ | ncRNA_intronic |
CAediting_1460016 | chr22_18982181_+ | ncRNA_intronic |
CAediting_1460017 | chr22_18982235_+ | ncRNA_intronic |
CAediting_1460018 | chr22_18982236_+ | ncRNA_intronic |
CAediting_1460019 | chr22_18982298_+ | ncRNA_intronic |
CAediting_1460020 | chr22_18982302_+ | ncRNA_intronic |
CAediting_1460021 | chr22_18982319_+ | ncRNA_intronic |
CAediting_1460022 | chr22_18982363_+ | ncRNA_intronic |
CAediting_1460023 | chr22_18982456_+ | ncRNA_intronic |
CAediting_1460024 | chr22_18982603_+ | ncRNA_intronic |
CAediting_1460025 | chr22_18983859_+ | ncRNA_intronic |
CAediting_1460026 | chr22_18983871_+ | ncRNA_intronic |
CAediting_1460027 | chr22_18983881_+ | ncRNA_intronic |
CAediting_1460028 | chr22_18985389_+ | ncRNA_intronic |
CAediting_1460029 | chr22_18985397_+ | ncRNA_intronic |
CAediting_1460030 | chr22_18985405_+ | ncRNA_intronic |
CAediting_1460031 | chr22_18985406_+ | ncRNA_intronic |
CAediting_1460032 | chr22_18985432_+ | ncRNA_intronic |
CAediting_1460033 | chr22_18985544_+ | ncRNA_intronic |
CAediting_1460034 | chr22_18985545_+ | ncRNA_intronic |
CAediting_1460035 | chr22_18985550_+ | ncRNA_intronic |
CAediting_1460036 | chr22_18985554_+ | ncRNA_intronic |
CAediting_1460037 | chr22_18985611_+ | ncRNA_intronic |
CAediting_1460038 | chr22_18985621_+ | ncRNA_intronic |
CAediting_1460039 | chr22_18986223_+ | ncRNA_exonic |
CAediting_1460040 | chr22_18986257_+ | ncRNA_exonic |
CAediting_1460041 | chr22_18986318_+ | ncRNA_exonic |
CAediting_1460042 | chr22_18987132_+ | ncRNA_intronic |
CAediting_1460043 | chr22_18987212_+ | ncRNA_intronic |
CAediting_1460044 | chr22_18987564_+ | ncRNA_intronic |
CAediting_1460045 | chr22_18987738_+ | ncRNA_intronic |
CAediting_1460046 | chr22_18988382_+ | ncRNA_intronic |
CAediting_1460047 | chr22_18988445_+ | ncRNA_intronic |
CAediting_1460048 | chr22_18988450_+ | ncRNA_intronic |
CAediting_1460049 | chr22_18988666_+ | ncRNA_intronic |
CAediting_1460050 | chr22_18988667_+ | ncRNA_intronic |
CAediting_1460051 | chr22_18988668_+ | ncRNA_intronic |
CAediting_1460052 | chr22_18988747_+ | ncRNA_intronic |
CAediting_1460053 | chr22_18988762_+ | ncRNA_intronic |
CAediting_1460054 | chr22_18988895_+ | ncRNA_intronic |
CAediting_1460055 | chr22_18989013_+ | ncRNA_intronic |
CAediting_1460056 | chr22_18989114_+ | ncRNA_intronic |
CAediting_1460057 | chr22_18989146_+ | ncRNA_intronic |
CAediting_1460058 | chr22_18989686_+ | ncRNA_exonic |
CAediting_1460059 | chr22_18989696_+ | ncRNA_exonic |
CAediting_1460060 | chr22_18989709_+ | ncRNA_exonic |
CAediting_1460061 | chr22_18989723_+ | ncRNA_exonic |
CAediting_1460062 | chr22_18989738_+ | ncRNA_exonic |
CAediting_1460063 | chr22_18989741_+ | ncRNA_exonic |
CAediting_1460064 | chr22_18989755_+ | ncRNA_exonic |
CAediting_1460065 | chr22_18989763_+ | ncRNA_exonic |
CAediting_1460066 | chr22_18989767_+ | ncRNA_exonic |
CAediting_1460067 | chr22_18989770_+ | ncRNA_exonic |
CAediting_1460068 | chr22_18989808_+ | ncRNA_exonic |
CAediting_1460069 | chr22_18989817_+ | ncRNA_exonic |
CAediting_1460070 | chr22_18989818_+ | ncRNA_exonic |
CAediting_1460071 | chr22_18989830_+ | ncRNA_exonic |
CAediting_1460072 | chr22_18990330_+ | ncRNA_exonic |
CAediting_1460073 | chr22_18995932_+ | ncRNA_intronic |
CAediting_1460074 | chr22_18995944_+ | ncRNA_intronic |
CAediting_1460075 | chr22_18995951_+ | ncRNA_intronic |
CAediting_1460076 | chr22_18995968_+ | ncRNA_intronic |
CAediting_1460077 | chr22_18995969_+ | ncRNA_intronic |
CAediting_1460078 | chr22_18995988_+ | ncRNA_intronic |
CAediting_1460079 | chr22_18995989_+ | ncRNA_intronic |
CAediting_1460080 | chr22_18995993_+ | ncRNA_intronic |
CAediting_1460081 | chr22_18996014_+ | ncRNA_intronic |
CAediting_1460082 | chr22_18996015_+ | ncRNA_intronic |
CAediting_1460083 | chr22_18996018_+ | ncRNA_intronic |
CAediting_1460084 | chr22_18996028_+ | ncRNA_intronic |
CAediting_1460085 | chr22_18996041_+ | ncRNA_intronic |
CAediting_1460086 | chr22_18996050_+ | ncRNA_intronic |
CAediting_1460087 | chr22_18996054_+ | ncRNA_intronic |
CAediting_1460088 | chr22_18996069_+ | ncRNA_intronic |
CAediting_1460089 | chr22_18996072_+ | ncRNA_intronic |
CAediting_1460090 | chr22_18996074_+ | ncRNA_intronic |
CAediting_1460091 | chr22_18996086_+ | ncRNA_intronic |
CAediting_1460092 | chr22_18996098_+ | ncRNA_intronic |
CAediting_1460093 | chr22_18996109_+ | ncRNA_intronic |
CAediting_1460094 | chr22_18996151_+ | ncRNA_intronic |
CAediting_1460095 | chr22_18996160_+ | ncRNA_intronic |
CAediting_1460096 | chr22_18996163_+ | ncRNA_intronic |
CAediting_1460097 | chr22_18996218_+ | ncRNA_intronic |
CAediting_1460098 | chr22_18996254_+ | ncRNA_intronic |
CAediting_1460099 | chr22_18996260_+ | ncRNA_intronic |
CAediting_1460100 | chr22_18996261_+ | ncRNA_intronic |
CAediting_1460101 | chr22_18996296_+ | ncRNA_intronic |
CAediting_1460102 | chr22_18996309_+ | ncRNA_intronic |
CAediting_1460103 | chr22_18996320_+ | ncRNA_intronic |
CAediting_1460104 | chr22_18996330_+ | ncRNA_intronic |
CAediting_1460105 | chr22_18996339_+ | ncRNA_intronic |
CAediting_1460106 | chr22_18996355_+ | ncRNA_intronic |
CAediting_1460107 | chr22_18996395_+ | ncRNA_intronic |
CAediting_1460108 | chr22_18996401_+ | ncRNA_intronic |
CAediting_1460109 | chr22_18996405_+ | ncRNA_intronic |
CAediting_1460110 | chr22_18996436_+ | ncRNA_intronic |
CAediting_1460111 | chr22_18996448_+ | ncRNA_intronic |
CAediting_1460112 | chr22_18996450_+ | ncRNA_intronic |
CAediting_1460113 | chr22_18996466_+ | ncRNA_intronic |
CAediting_1460114 | chr22_18998406_+ | ncRNA_exonic |
CAediting_1460115 | chr22_18998691_+ | ncRNA_intronic |
CAediting_1460116 | chr22_18998734_+ | ncRNA_intronic |
CAediting_1460117 | chr22_18998772_+ | ncRNA_intronic |
CAediting_1460118 | chr22_18998794_+ | ncRNA_intronic |
CAediting_1460119 | chr22_18998835_+ | ncRNA_intronic |
CAediting_1460120 | chr22_18998844_+ | ncRNA_intronic |
CAediting_1460121 | chr22_18998896_+ | ncRNA_intronic |
CAediting_1460122 | chr22_18998899_+ | ncRNA_intronic |
CAediting_1460123 | chr22_18998900_+ | ncRNA_intronic |
CAediting_1460124 | chr22_18999625_+ | ncRNA_intronic |
CAediting_1460125 | chr22_18999632_+ | ncRNA_intronic |
CAediting_1460126 | chr22_18999667_+ | ncRNA_intronic |
CAediting_1460127 | chr22_18999678_+ | ncRNA_intronic |
CAediting_1460128 | chr22_19001247_+ | ncRNA_intronic |
CAediting_1460129 | chr22_19001275_+ | ncRNA_intronic |
CAediting_1460130 | chr22_19001292_+ | ncRNA_intronic |
CAediting_1460131 | chr22_19001296_+ | ncRNA_intronic |
CAediting_1460132 | chr22_19001353_+ | ncRNA_intronic |
CAediting_1460133 | chr22_19001367_+ | ncRNA_intronic |
CAediting_1460134 | chr22_19001370_+ | ncRNA_intronic |
CAediting_1460135 | chr22_19001379_+ | ncRNA_intronic |
CAediting_1460136 | chr22_19002038_+ | ncRNA_intronic |
CAediting_1460137 | chr22_19002051_+ | ncRNA_intronic |
CAediting_1460138 | chr22_19002059_+ | ncRNA_intronic |
CAediting_1460139 | chr22_19002179_+ | ncRNA_intronic |
CAediting_1460140 | chr22_19004327_+ | ncRNA_intronic |
CAediting_1460141 | chr22_19004343_+ | ncRNA_intronic |
CAediting_1460142 | chr22_19004345_+ | ncRNA_intronic |
CAediting_1460143 | chr22_19004351_+ | ncRNA_intronic |
CAediting_1460144 | chr22_19004873_+ | ncRNA_intronic |
CAediting_1460145 | chr22_19004880_+ | ncRNA_intronic |
CAediting_1460146 | chr22_19005417_+ | ncRNA_intronic |
CAediting_1460147 | chr22_19006376_+ | ncRNA_intronic |
CAediting_1460148 | chr22_19007526_+ | ncRNA_intronic |
CAediting_1460149 | chr22_19007564_+ | ncRNA_intronic |
CAediting_1460150 | chr22_19007567_+ | ncRNA_intronic |
CAediting_1460151 | chr22_19008204_+ | ncRNA_intronic |
CAediting_1460152 | chr22_19008687_+ | ncRNA_intronic |
CAediting_1460153 | chr22_19011711_+ | ncRNA_intronic |
CAediting_1460154 | chr22_19011712_+ | ncRNA_intronic |
CAediting_1460155 | chr22_19011751_+ | ncRNA_intronic |
CAediting_1460156 | chr22_19011790_+ | ncRNA_intronic |
CAediting_1460157 | chr22_19013989_+ | ncRNA_intronic |
CAediting_1460158 | chr22_19013990_+ | ncRNA_intronic |
CAediting_1460159 | chr22_19014020_+ | ncRNA_intronic |
CAediting_1460160 | chr22_19014061_+ | ncRNA_intronic |
CAediting_1460161 | chr22_19015237_+ | ncRNA_intronic |
CAediting_1460162 | chr22_19015240_+ | ncRNA_intronic |
CAediting_1460163 | chr22_19015246_+ | ncRNA_intronic |
CAediting_1460164 | chr22_19015252_+ | ncRNA_intronic |
CAediting_1460165 | chr22_19015253_+ | ncRNA_intronic |
CAediting_1460166 | chr22_19015260_+ | ncRNA_intronic |
CAediting_1460167 | chr22_19015265_+ | ncRNA_intronic |
CAediting_1460168 | chr22_19015293_+ | ncRNA_intronic |
CAediting_1460169 | chr22_19015305_+ | ncRNA_intronic |
CAediting_1460170 | chr22_19015363_+ | ncRNA_intronic |
CAediting_1460171 | chr22_19015367_+ | ncRNA_intronic |
CAediting_1460172 | chr22_19015369_+ | ncRNA_intronic |
CAediting_1460173 | chr22_19015384_+ | ncRNA_intronic |
CAediting_1460174 | chr22_19015389_+ | ncRNA_intronic |
CAediting_1460175 | chr22_19015396_+ | ncRNA_intronic |
CAediting_1460176 | chr22_19015400_+ | ncRNA_intronic |
CAediting_1460177 | chr22_19015415_+ | ncRNA_intronic |
CAediting_1460178 | chr22_19015423_+ | ncRNA_intronic |
CAediting_1460179 | chr22_19015424_+ | ncRNA_intronic |
CAediting_1460180 | chr22_19015659_+ | ncRNA_intronic |
CAediting_1460181 | chr22_19015701_+ | ncRNA_intronic |
CAediting_1460182 | chr22_19015755_+ | ncRNA_intronic |
CAediting_1460183 | chr22_19015756_+ | ncRNA_intronic |
CAediting_1460184 | chr22_19015768_+ | ncRNA_intronic |
CAediting_1460185 | chr22_19015794_+ | ncRNA_intronic |
CAediting_1460186 | chr22_19015835_+ | ncRNA_intronic |
CAediting_1460187 | chr22_19016193_+ | ncRNA_intronic |
CAediting_1460188 | chr22_19016256_+ | ncRNA_intronic |
CAediting_1460189 | chr22_19016426_+ | ncRNA_intronic |
CAediting_1460190 | chr22_19016479_+ | ncRNA_intronic |
CAediting_1460191 | chr22_19016658_+ | ncRNA_intronic |
CAediting_1460192 | chr22_19016671_+ | ncRNA_intronic |
CAediting_1460193 | chr22_19016740_+ | ncRNA_intronic |
CAediting_1460194 | chr22_19016766_+ | ncRNA_intronic |
CAediting_1460195 | chr22_19017015_+ | ncRNA_intronic |
CAediting_1460196 | chr22_19017036_+ | ncRNA_intronic |
CAediting_1460197 | chr22_19017039_+ | ncRNA_intronic |
CAediting_1460198 | chr22_19017041_+ | ncRNA_intronic |
CAediting_1460199 | chr22_19017042_+ | ncRNA_intronic |
CAediting_1460200 | chr22_19017054_+ | ncRNA_intronic |
CAediting_1460201 | chr22_19017107_+ | ncRNA_intronic |
CAediting_1460202 | chr22_19017108_+ | ncRNA_intronic |
CAediting_1460203 | chr22_19017128_+ | ncRNA_intronic |
CAediting_1460204 | chr22_19020931_+ | ncRNA_intronic |
CAediting_1460205 | chr22_19020937_+ | ncRNA_intronic |
CAediting_1460206 | chr22_19020944_+ | ncRNA_intronic |
CAediting_1460207 | chr22_19021030_+ | ncRNA_intronic |
CAediting_1460208 | chr22_19021070_+ | ncRNA_intronic |
CAediting_1460209 | chr22_19021109_+ | ncRNA_intronic |
CAediting_1460210 | chr22_19021356_+ | ncRNA_intronic |
CAediting_1460211 | chr22_19021376_+ | ncRNA_intronic |
CAediting_1460212 | chr22_19021377_+ | ncRNA_intronic |
CAediting_1460213 | chr22_19021382_+ | ncRNA_intronic |
CAediting_1460214 | chr22_19021445_+ | ncRNA_intronic |
CAediting_1460215 | chr22_19021452_+ | ncRNA_intronic |
CAediting_1460216 | chr22_19021492_+ | ncRNA_intronic |
CAediting_1460217 | chr22_19021532_+ | ncRNA_intronic |
CAediting_1460218 | chr22_19021533_+ | ncRNA_intronic |
CAediting_1460219 | chr22_19021546_+ | ncRNA_intronic |
CAediting_1460220 | chr22_19021573_+ | ncRNA_intronic |
CAediting_1460221 | chr22_19021574_+ | ncRNA_intronic |
CAediting_1460222 | chr22_19021981_+ | ncRNA_intronic |
CAediting_1460223 | chr22_19021982_+ | ncRNA_intronic |
CAediting_1460224 | chr22_19021989_+ | ncRNA_intronic |
CAediting_1460225 | chr22_19021990_+ | ncRNA_intronic |
CAediting_1460226 | chr22_19021995_+ | ncRNA_intronic |
CAediting_1460227 | chr22_19022103_+ | ncRNA_intronic |
CAediting_1460228 | chr22_19022142_+ | ncRNA_intronic |
CAediting_1460229 | chr22_19022149_+ | ncRNA_intronic |
CAediting_1460230 | chr22_19022177_+ | ncRNA_intronic |
CAediting_1460231 | chr22_19022184_+ | ncRNA_intronic |
CAediting_1460232 | chr22_19022197_+ | ncRNA_intronic |
CAediting_1460233 | chr22_19022257_+ | ncRNA_intronic |
CAediting_1460234 | chr22_19022466_+ | ncRNA_intronic |
CAediting_1460235 | chr22_19022476_+ | ncRNA_intronic |
CAediting_1460236 | chr22_19022517_+ | ncRNA_intronic |
CAediting_1460237 | chr22_19022520_+ | ncRNA_intronic |
CAediting_1460238 | chr22_19022526_+ | ncRNA_intronic |
CAediting_1460239 | chr22_19022534_+ | ncRNA_intronic |
CAediting_1460240 | chr22_19022546_+ | ncRNA_intronic |
CAediting_1460241 | chr22_19022575_+ | ncRNA_intronic |
CAediting_1460242 | chr22_19022584_+ | ncRNA_intronic |
CAediting_1460243 | chr22_19022589_+ | ncRNA_intronic |
CAediting_1460244 | chr22_19022597_+ | ncRNA_intronic |
CAediting_1460245 | chr22_19022598_+ | ncRNA_intronic |
CAediting_1460246 | chr22_19022599_+ | ncRNA_intronic |
CAediting_1460247 | chr22_19022611_+ | ncRNA_intronic |
CAediting_1460248 | chr22_19022613_+ | ncRNA_intronic |
CAediting_1460249 | chr22_19022620_+ | ncRNA_intronic |
CAediting_1460250 | chr22_19024260_+ | ncRNA_intronic |
CAediting_1460251 | chr22_19024311_+ | ncRNA_intronic |
CAediting_1460252 | chr22_19028669_+ | ncRNA_intronic |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1459991 | chr22_18976756_+ | SINE | Alu | AluSx1 |
CAediting_1459992 | chr22_18976851_+ | SINE | Alu | AluSx1 |
CAediting_1459993 | chr22_18976854_+ | SINE | Alu | AluSx1 |
CAediting_1459994 | chr22_18976889_+ | SINE | Alu | AluSx1 |
CAediting_1459995 | chr22_18976914_+ | SINE | Alu | AluSx1 |
CAediting_1459996 | chr22_18977413_+ | LINE | L1 | L1ME1 |
CAediting_1459997 | chr22_18980382_+ | SINE | Alu | AluY |
CAediting_1459998 | chr22_18980389_+ | SINE | Alu | AluY |
CAediting_1459999 | chr22_18981545_+ | SINE | Alu | AluJo |
CAediting_1460000 | chr22_18981548_+ | SINE | Alu | AluJo |
CAediting_1460001 | chr22_18981551_+ | SINE | Alu | AluJo |
CAediting_1460002 | chr22_18981566_+ | SINE | Alu | AluJo |
CAediting_1460003 | chr22_18981579_+ | SINE | Alu | AluJo |
CAediting_1460004 | chr22_18981587_+ | SINE | Alu | AluJo |
CAediting_1460005 | chr22_18981590_+ | SINE | Alu | AluJo |
CAediting_1460006 | chr22_18981599_+ | SINE | Alu | AluJo |
CAediting_1460007 | chr22_18981604_+ | SINE | Alu | AluJo |
CAediting_1460008 | chr22_18981706_+ | SINE | Alu | AluJo |
CAediting_1460009 | chr22_18981719_+ | SINE | Alu | AluJo |
CAediting_1460010 | chr22_18981747_+ | SINE | Alu | AluJo |
CAediting_1460011 | chr22_18981748_+ | SINE | Alu | AluJo |
CAediting_1460012 | chr22_18981750_+ | SINE | Alu | AluJo |
CAediting_1460013 | chr22_18981759_+ | SINE | Alu | AluJo |
CAediting_1460014 | chr22_18981955_+ | SINE | Alu | AluJr4 |
CAediting_1460015 | chr22_18982157_+ | SINE | Alu | AluSx1 |
CAediting_1460016 | chr22_18982181_+ | SINE | Alu | AluSx1 |
CAediting_1460017 | chr22_18982235_+ | SINE | Alu | AluSx1 |
CAediting_1460018 | chr22_18982236_+ | SINE | Alu | AluSx1 |
CAediting_1460019 | chr22_18982298_+ | SINE | Alu | AluSx1 |
CAediting_1460020 | chr22_18982302_+ | SINE | Alu | AluSx1 |
CAediting_1460021 | chr22_18982319_+ | SINE | Alu | AluSx1 |
CAediting_1460022 | chr22_18982363_+ | SINE | Alu | AluSx1 |
CAediting_1460023 | chr22_18982456_+ | SINE | Alu | AluY |
CAediting_1460024 | chr22_18982603_+ | SINE | Alu | AluY |
CAediting_1460025 | chr22_18983859_+ | SINE | Alu | AluSg |
CAediting_1460026 | chr22_18983871_+ | SINE | Alu | AluSg |
CAediting_1460027 | chr22_18983881_+ | SINE | Alu | AluSg |
CAediting_1460028 | chr22_18985389_+ | SINE | Alu | AluSq |
CAediting_1460029 | chr22_18985397_+ | SINE | Alu | AluSq |
CAediting_1460030 | chr22_18985405_+ | SINE | Alu | AluSq |
CAediting_1460031 | chr22_18985406_+ | SINE | Alu | AluSq |
CAediting_1460032 | chr22_18985432_+ | SINE | Alu | AluSq |
CAediting_1460033 | chr22_18985544_+ | SINE | Alu | AluSq |
CAediting_1460034 | chr22_18985545_+ | SINE | Alu | AluSq |
CAediting_1460035 | chr22_18985550_+ | SINE | Alu | AluSq |
CAediting_1460036 | chr22_18985554_+ | SINE | Alu | AluSq |
CAediting_1460037 | chr22_18985611_+ | SINE | Alu | AluSq |
CAediting_1460038 | chr22_18985621_+ | SINE | Alu | AluSq |
CAediting_1460039 | chr22_18986223_+ | SINE | Alu | AluSx |
CAediting_1460040 | chr22_18986257_+ | SINE | Alu | AluSx |
CAediting_1460041 | chr22_18986318_+ | SINE | Alu | AluSx |
CAediting_1460042 | chr22_18987132_+ | SINE | Alu | AluJo |
CAediting_1460043 | chr22_18987212_+ | SINE | Alu | AluJo |
CAediting_1460044 | chr22_18987564_+ | SINE | Alu | AluSz |
CAediting_1460046 | chr22_18988382_+ | SINE | Alu | AluSx1 |
CAediting_1460047 | chr22_18988445_+ | SINE | Alu | AluSx1 |
CAediting_1460048 | chr22_18988450_+ | SINE | Alu | AluSx1 |
CAediting_1460054 | chr22_18988895_+ | SINE | Alu | AluSx3 |
CAediting_1460055 | chr22_18989013_+ | SINE | Alu | AluJr |
CAediting_1460056 | chr22_18989114_+ | SINE | Alu | AluJr |
CAediting_1460057 | chr22_18989146_+ | SINE | Alu | AluJr |
CAediting_1460058 | chr22_18989686_+ | SINE | Alu | AluY |
CAediting_1460059 | chr22_18989696_+ | SINE | Alu | AluY |
CAediting_1460060 | chr22_18989709_+ | SINE | Alu | AluY |
CAediting_1460061 | chr22_18989723_+ | SINE | Alu | AluY |
CAediting_1460062 | chr22_18989738_+ | SINE | Alu | AluY |
CAediting_1460063 | chr22_18989741_+ | SINE | Alu | AluY |
CAediting_1460064 | chr22_18989755_+ | SINE | Alu | AluY |
CAediting_1460065 | chr22_18989763_+ | SINE | Alu | AluY |
CAediting_1460066 | chr22_18989767_+ | SINE | Alu | AluY |
CAediting_1460067 | chr22_18989770_+ | SINE | Alu | AluY |
CAediting_1460068 | chr22_18989808_+ | SINE | Alu | AluY |
CAediting_1460069 | chr22_18989817_+ | SINE | Alu | AluY |
CAediting_1460070 | chr22_18989818_+ | SINE | Alu | AluY |
CAediting_1460071 | chr22_18989830_+ | SINE | Alu | AluY |
CAediting_1460072 | chr22_18990330_+ | LINE | L1 | L1MB3 |
CAediting_1460073 | chr22_18995932_+ | SINE | Alu | AluSq2 |
CAediting_1460074 | chr22_18995944_+ | SINE | Alu | AluSq2 |
CAediting_1460075 | chr22_18995951_+ | SINE | Alu | AluSq2 |
CAediting_1460076 | chr22_18995968_+ | SINE | Alu | AluSq2 |
CAediting_1460077 | chr22_18995969_+ | SINE | Alu | AluSq2 |
CAediting_1460078 | chr22_18995988_+ | SINE | Alu | AluSq2 |
CAediting_1460079 | chr22_18995989_+ | SINE | Alu | AluSq2 |
CAediting_1460080 | chr22_18995993_+ | SINE | Alu | AluSq2 |
CAediting_1460081 | chr22_18996014_+ | SINE | Alu | AluSq2 |
CAediting_1460082 | chr22_18996015_+ | SINE | Alu | AluSq2 |
CAediting_1460083 | chr22_18996018_+ | SINE | Alu | AluSq2 |
CAediting_1460084 | chr22_18996028_+ | SINE | Alu | AluSq2 |
CAediting_1460085 | chr22_18996041_+ | SINE | Alu | AluSq2 |
CAediting_1460086 | chr22_18996050_+ | SINE | Alu | AluSq2 |
CAediting_1460087 | chr22_18996054_+ | SINE | Alu | AluSq2 |
CAediting_1460088 | chr22_18996069_+ | SINE | Alu | AluSq2 |
CAediting_1460089 | chr22_18996072_+ | SINE | Alu | AluSq2 |
CAediting_1460090 | chr22_18996074_+ | SINE | Alu | AluSq2 |
CAediting_1460091 | chr22_18996086_+ | SINE | Alu | AluSq2 |
CAediting_1460092 | chr22_18996098_+ | SINE | Alu | AluSq2 |
CAediting_1460093 | chr22_18996109_+ | SINE | Alu | AluSq2 |
CAediting_1460094 | chr22_18996151_+ | SINE | Alu | AluSq2 |
CAediting_1460095 | chr22_18996160_+ | SINE | Alu | AluSq2 |
CAediting_1460096 | chr22_18996163_+ | SINE | Alu | AluSq2 |
CAediting_1460098 | chr22_18996254_+ | SINE | Alu | AluJb |
CAediting_1460099 | chr22_18996260_+ | SINE | Alu | AluJb |
CAediting_1460100 | chr22_18996261_+ | SINE | Alu | AluJb |
CAediting_1460101 | chr22_18996296_+ | SINE | Alu | AluJb |
CAediting_1460102 | chr22_18996309_+ | SINE | Alu | AluJb |
CAediting_1460103 | chr22_18996320_+ | SINE | Alu | AluJb |
CAediting_1460104 | chr22_18996330_+ | SINE | Alu | AluJb |
CAediting_1460105 | chr22_18996339_+ | SINE | Alu | AluJb |
CAediting_1460106 | chr22_18996355_+ | SINE | Alu | AluJb |
CAediting_1460107 | chr22_18996395_+ | SINE | Alu | AluJb |
CAediting_1460108 | chr22_18996401_+ | SINE | Alu | AluJb |
CAediting_1460109 | chr22_18996405_+ | SINE | Alu | AluJb |
CAediting_1460110 | chr22_18996436_+ | SINE | Alu | AluJb |
CAediting_1460111 | chr22_18996448_+ | SINE | Alu | AluJb |
CAediting_1460112 | chr22_18996450_+ | SINE | Alu | AluJb |
CAediting_1460113 | chr22_18996466_+ | SINE | Alu | AluJb |
CAediting_1460114 | chr22_18998406_+ | SINE | Alu | Alu |
CAediting_1460115 | chr22_18998691_+ | SINE | Alu | AluJb |
CAediting_1460116 | chr22_18998734_+ | SINE | Alu | AluJb |
CAediting_1460117 | chr22_18998772_+ | SINE | Alu | AluJb |
CAediting_1460118 | chr22_18998794_+ | SINE | Alu | AluJb |
CAediting_1460119 | chr22_18998835_+ | SINE | Alu | AluJb |
CAediting_1460120 | chr22_18998844_+ | SINE | Alu | AluJb |
CAediting_1460121 | chr22_18998896_+ | SINE | Alu | AluJb |
CAediting_1460122 | chr22_18998899_+ | SINE | Alu | AluJb |
CAediting_1460123 | chr22_18998900_+ | SINE | Alu | AluJb |
CAediting_1460124 | chr22_18999625_+ | SINE | Alu | AluSz |
CAediting_1460125 | chr22_18999632_+ | SINE | Alu | AluSz |
CAediting_1460126 | chr22_18999667_+ | SINE | Alu | AluSz |
CAediting_1460127 | chr22_18999678_+ | SINE | Alu | AluSz |
CAediting_1460128 | chr22_19001247_+ | SINE | Alu | AluJr |
CAediting_1460129 | chr22_19001275_+ | SINE | Alu | AluJr |
CAediting_1460130 | chr22_19001292_+ | SINE | Alu | AluJr |
CAediting_1460131 | chr22_19001296_+ | SINE | Alu | AluJr |
CAediting_1460132 | chr22_19001353_+ | SINE | Alu | AluJr |
CAediting_1460133 | chr22_19001367_+ | SINE | Alu | AluJr |
CAediting_1460134 | chr22_19001370_+ | SINE | Alu | AluJr |
CAediting_1460135 | chr22_19001379_+ | SINE | Alu | AluJr |
CAediting_1460136 | chr22_19002038_+ | SINE | Alu | AluSx1 |
CAediting_1460137 | chr22_19002051_+ | SINE | Alu | AluSx1 |
CAediting_1460138 | chr22_19002059_+ | SINE | Alu | AluSx1 |
CAediting_1460139 | chr22_19002179_+ | SINE | Alu | AluSx1 |
CAediting_1460140 | chr22_19004327_+ | SINE | Alu | AluJr4 |
CAediting_1460141 | chr22_19004343_+ | SINE | Alu | AluJr4 |
CAediting_1460142 | chr22_19004345_+ | SINE | Alu | AluJr4 |
CAediting_1460143 | chr22_19004351_+ | SINE | Alu | AluJr4 |
CAediting_1460144 | chr22_19004873_+ | SINE | Alu | AluJr4 |
CAediting_1460145 | chr22_19004880_+ | SINE | Alu | AluJr4 |
CAediting_1460146 | chr22_19005417_+ | SINE | Alu | AluSq2 |
CAediting_1460147 | chr22_19006376_+ | SINE | Alu | AluY |
CAediting_1460148 | chr22_19007526_+ | SINE | Alu | AluSx |
CAediting_1460149 | chr22_19007564_+ | SINE | Alu | AluSx |
CAediting_1460150 | chr22_19007567_+ | SINE | Alu | AluSx |
CAediting_1460151 | chr22_19008204_+ | SINE | Alu | AluJr4 |
CAediting_1460152 | chr22_19008687_+ | SINE | Alu | AluSx4 |
CAediting_1460153 | chr22_19011711_+ | SINE | Alu | AluSz6 |
CAediting_1460154 | chr22_19011712_+ | SINE | Alu | AluSz6 |
CAediting_1460155 | chr22_19011751_+ | SINE | Alu | AluSz6 |
CAediting_1460156 | chr22_19011790_+ | SINE | Alu | AluSz6 |
CAediting_1460157 | chr22_19013989_+ | SINE | Alu | AluSx4 |
CAediting_1460158 | chr22_19013990_+ | SINE | Alu | AluSx4 |
CAediting_1460159 | chr22_19014020_+ | SINE | Alu | AluSx4 |
CAediting_1460160 | chr22_19014061_+ | SINE | Alu | AluSx4 |
CAediting_1460161 | chr22_19015237_+ | SINE | Alu | AluSx |
CAediting_1460162 | chr22_19015240_+ | SINE | Alu | AluSx |
CAediting_1460163 | chr22_19015246_+ | SINE | Alu | AluSx |
CAediting_1460164 | chr22_19015252_+ | SINE | Alu | AluSx |
CAediting_1460165 | chr22_19015253_+ | SINE | Alu | AluSx |
CAediting_1460166 | chr22_19015260_+ | SINE | Alu | AluSx |
CAediting_1460167 | chr22_19015265_+ | SINE | Alu | AluSx |
CAediting_1460168 | chr22_19015293_+ | SINE | Alu | AluSx |
CAediting_1460169 | chr22_19015305_+ | SINE | Alu | AluSx |
CAediting_1460170 | chr22_19015363_+ | SINE | Alu | AluSz6 |
CAediting_1460171 | chr22_19015367_+ | SINE | Alu | AluSz6 |
CAediting_1460172 | chr22_19015369_+ | SINE | Alu | AluSz6 |
CAediting_1460173 | chr22_19015384_+ | SINE | Alu | AluSz6 |
CAediting_1460174 | chr22_19015389_+ | SINE | Alu | AluSz6 |
CAediting_1460175 | chr22_19015396_+ | SINE | Alu | AluSz6 |
CAediting_1460176 | chr22_19015400_+ | SINE | Alu | AluSz6 |
CAediting_1460177 | chr22_19015415_+ | SINE | Alu | AluSz6 |
CAediting_1460178 | chr22_19015423_+ | SINE | Alu | AluSz6 |
CAediting_1460179 | chr22_19015424_+ | SINE | Alu | AluSz6 |
CAediting_1460180 | chr22_19015659_+ | SINE | Alu | AluSx |
CAediting_1460181 | chr22_19015701_+ | SINE | Alu | AluSx |
CAediting_1460182 | chr22_19015755_+ | SINE | Alu | AluSx |
CAediting_1460183 | chr22_19015756_+ | SINE | Alu | AluSx |
CAediting_1460184 | chr22_19015768_+ | SINE | Alu | AluSx |
CAediting_1460185 | chr22_19015794_+ | SINE | Alu | AluSx |
CAediting_1460186 | chr22_19015835_+ | SINE | Alu | AluSx |
CAediting_1460191 | chr22_19016658_+ | SINE | Alu | AluJr |
CAediting_1460192 | chr22_19016671_+ | SINE | Alu | AluJr |
CAediting_1460193 | chr22_19016740_+ | SINE | Alu | AluJr |
CAediting_1460194 | chr22_19016766_+ | SINE | Alu | AluJr |
CAediting_1460195 | chr22_19017015_+ | SINE | Alu | AluSq2 |
CAediting_1460196 | chr22_19017036_+ | SINE | Alu | AluSq2 |
CAediting_1460197 | chr22_19017039_+ | SINE | Alu | AluSq2 |
CAediting_1460198 | chr22_19017041_+ | SINE | Alu | AluSq2 |
CAediting_1460199 | chr22_19017042_+ | SINE | Alu | AluSq2 |
CAediting_1460200 | chr22_19017054_+ | SINE | Alu | AluSq2 |
CAediting_1460201 | chr22_19017107_+ | SINE | Alu | AluSq2 |
CAediting_1460202 | chr22_19017108_+ | SINE | Alu | AluSq2 |
CAediting_1460203 | chr22_19017128_+ | SINE | Alu | AluSq2 |
CAediting_1460204 | chr22_19020931_+ | SINE | Alu | AluSq4 |
CAediting_1460205 | chr22_19020937_+ | SINE | Alu | AluSq4 |
CAediting_1460206 | chr22_19020944_+ | SINE | Alu | AluSq4 |
CAediting_1460207 | chr22_19021030_+ | SINE | Alu | AluSq4 |
CAediting_1460208 | chr22_19021070_+ | SINE | Alu | AluSq4 |
CAediting_1460209 | chr22_19021109_+ | SINE | Alu | AluSq4 |
CAediting_1460210 | chr22_19021356_+ | SINE | Alu | AluSp |
CAediting_1460211 | chr22_19021376_+ | SINE | Alu | AluSp |
CAediting_1460212 | chr22_19021377_+ | SINE | Alu | AluSp |
CAediting_1460213 | chr22_19021382_+ | SINE | Alu | AluSp |
CAediting_1460214 | chr22_19021445_+ | SINE | Alu | AluSp |
CAediting_1460215 | chr22_19021452_+ | SINE | Alu | AluSp |
CAediting_1460216 | chr22_19021492_+ | SINE | Alu | AluSp |
CAediting_1460217 | chr22_19021532_+ | SINE | Alu | AluSp |
CAediting_1460218 | chr22_19021533_+ | SINE | Alu | AluSp |
CAediting_1460219 | chr22_19021546_+ | SINE | Alu | AluSp |
CAediting_1460220 | chr22_19021573_+ | SINE | Alu | AluSp |
CAediting_1460221 | chr22_19021574_+ | SINE | Alu | AluSp |
CAediting_1460222 | chr22_19021981_+ | SINE | Alu | AluYm1 |
CAediting_1460223 | chr22_19021982_+ | SINE | Alu | AluYm1 |
CAediting_1460224 | chr22_19021989_+ | SINE | Alu | AluYm1 |
CAediting_1460225 | chr22_19021990_+ | SINE | Alu | AluYm1 |
CAediting_1460226 | chr22_19021995_+ | SINE | Alu | AluYm1 |
CAediting_1460227 | chr22_19022103_+ | SINE | Alu | AluYm1 |
CAediting_1460228 | chr22_19022142_+ | SINE | Alu | AluYm1 |
CAediting_1460229 | chr22_19022149_+ | SINE | Alu | AluYm1 |
CAediting_1460230 | chr22_19022177_+ | SINE | Alu | AluYm1 |
CAediting_1460231 | chr22_19022184_+ | SINE | Alu | AluYm1 |
CAediting_1460232 | chr22_19022197_+ | SINE | Alu | AluYm1 |
CAediting_1460233 | chr22_19022257_+ | SINE | Alu | AluYm1 |
CAediting_1460234 | chr22_19022466_+ | SINE | Alu | AluSz |
CAediting_1460235 | chr22_19022476_+ | SINE | Alu | AluSz |
CAediting_1460236 | chr22_19022517_+ | SINE | Alu | AluSz |
CAediting_1460237 | chr22_19022520_+ | SINE | Alu | AluSz |
CAediting_1460238 | chr22_19022526_+ | SINE | Alu | AluSz |
CAediting_1460239 | chr22_19022534_+ | SINE | Alu | AluSz |
CAediting_1460240 | chr22_19022546_+ | SINE | Alu | AluSz |
CAediting_1460241 | chr22_19022575_+ | SINE | Alu | AluSz |
CAediting_1460242 | chr22_19022584_+ | SINE | Alu | AluSz |
CAediting_1460243 | chr22_19022589_+ | SINE | Alu | AluSz |
CAediting_1460244 | chr22_19022597_+ | SINE | Alu | AluSz |
CAediting_1460245 | chr22_19022598_+ | SINE | Alu | AluSz |
CAediting_1460246 | chr22_19022599_+ | SINE | Alu | AluSz |
CAediting_1460247 | chr22_19022611_+ | SINE | Alu | AluSz |
CAediting_1460248 | chr22_19022613_+ | SINE | Alu | AluSz |
CAediting_1460249 | chr22_19022620_+ | SINE | Alu | AluSz |
CAediting_1460250 | chr22_19024260_+ | SINE | Alu | AluSc5 |
CAediting_1460251 | chr22_19024311_+ | SINE | Alu | AluSc5 |
CAediting_1460252 | chr22_19028669_+ | SINE | Alu | AluJr |
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RNA A-to-I editing events in the alternative splicing sites for DGCR5 |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000237517.7.DGCR5. |
Correlation between RNA A-to-I editing and PSI for ENSG00000237517.7.DGCR5. |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for DGCR5 |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
Top |
Protein coding region RNA A-to-I editings for DGCR5 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for DGCR5 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1460065 | chr22_18989763_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-3190-5p | 18989762 | 18989769 | 8mer-1a | 18989751 | 18989769 | 152 | -22.97 |
CAediting_1460065 | chr22_18989763_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548s | 18989761 | 18989767 | 7mer-m8 | 18989746 | 18989768 | 149 | -13.99 |
CAediting_1460058 | chr22_18989686_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4639-3p | 18989680 | 18989686 | 7mer-m8 | 18989668 | 18989687 | 140 | -15.12 |
CAediting_1460058 | chr22_18989686_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4691-3p | 18989684 | 18989690 | 7mer-m8 | 18989671 | 18989691 | 145 | -24.83 |
CAediting_1460058 | chr22_18989686_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6777-3p | 18989681 | 18989687 | 7mer-m8 | 18989669 | 18989688 | 145 | -18.79 |
CAediting_1460059 | chr22_18989696_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-17-3p | 18989693 | 18989699 | 7mer-m8 | 18989678 | 18989700 | 149 | -17.66 |
CAediting_1460066 | chr22_18989767_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1180-3p | 18989764 | 18989770 | 7mer-m8 | 18989751 | 18989771 | 161 | -24.78 |
CAediting_1460070 | chr22_18989818_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-3189-3p | 18989813 | 18989819 | 7mer-m8 | 18989798 | 18989820 | 153 | -24.1 |
CAediting_1460070 | chr22_18989818_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6813-3p | 18989814 | 18989820 | 7mer-m8 | 18989801 | 18989821 | 140 | -10.68 |
CAediting_1460071 | chr22_18989830_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-106a-3p | 18989827 | 18989832 | 6mer | 18989812 | 18989833 | 141 | -21.13 |
CAediting_1460072 | chr22_18990330_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1295b-5p | 18990327 | 18990333 | 7mer-m8 | 18990314 | 18990334 | 140 | -13.88 |
CAediting_1460072 | chr22_18990330_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1912-3p | 18990327 | 18990333 | 7mer-m8 | 18990315 | 18990334 | 153 | -20.25 |
CAediting_1460072 | chr22_18990330_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-3919 | 18990324 | 18990330 | 7mer-m8 | 18990311 | 18990331 | 159 | -22.39 |
CAediting_1460114 | chr22_18998406_+ | ENSG00000237517.7 | ENST00000424407.1 | hsa-miR-4738-5p | 18998401 | 18998408 | 8mer-1a | 18998387 | 18998408 | 143 | -16.63 |
CAediting_1460114 | chr22_18998406_+ | ENSG00000237517.7 | ENST00000424407.1 | hsa-miR-766-3p | 18998403 | 18998409 | 7mer-m8 | 18998389 | 18998410 | 144 | -13.07 |
CAediting_1460060 | chr22_18989709_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-10400-5p | 18989705 | 18989712 | 8mer-1a | 18989691 | 18989712 | 161 | -28.01 |
CAediting_1460060 | chr22_18989709_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-3960 | 18989704 | 18989710 | 7mer-m8 | 18989691 | 18989711 | 141 | -24.57 |
CAediting_1460060 | chr22_18989709_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4467 | 18989705 | 18989712 | 8mer-1a | 18989690 | 18989712 | 151 | -24.75 |
CAediting_1460060 | chr22_18989709_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-8072 | 18989704 | 18989710 | 7mer-m8 | 18989690 | 18989711 | 148 | -30.51 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4661-5p | 18989718 | 18989724 | 7mer-m8 | 18989704 | 18989725 | 145 | -18.81 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548ae-3p | 18989722 | 18989728 | 7mer-m8 | 18989709 | 18989729 | 141 | -6.06 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548ah-3p | 18989722 | 18989728 | 7mer-m8 | 18989707 | 18989729 | 143 | -6.06 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548aj-3p | 18989722 | 18989728 | 7mer-m8 | 18989709 | 18989729 | 141 | -6.96 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548am-3p | 18989722 | 18989728 | 7mer-m8 | 18989707 | 18989729 | 143 | -6.06 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548aq-3p | 18989722 | 18989728 | 7mer-m8 | 18989708 | 18989729 | 141 | -6.06 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548j-3p | 18989722 | 18989728 | 7mer-m8 | 18989709 | 18989729 | 141 | -6.06 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548x-3p | 18989722 | 18989728 | 7mer-m8 | 18989710 | 18989729 | 141 | -6.96 |
CAediting_1460061 | chr22_18989723_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-7844-5p | 18989720 | 18989726 | 7mer-m8 | 18989706 | 18989727 | 164 | -22.52 |
CAediting_1460067 | chr22_18989770_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-514a-5p | 18989765 | 18989771 | 7mer-m8 | 18989746 | 18989772 | 144 | -20.07 |
CAediting_1460067 | chr22_18989770_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6777-3p | 18989767 | 18989773 | 7mer-m8 | 18989754 | 18989774 | 147 | -15.87 |
CAediting_1460069 | chr22_18989817_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-326 | 18989813 | 18989819 | 7mer-m8 | 18989801 | 18989820 | 140 | -13.25 |
CAediting_1460069 | chr22_18989817_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-330-5p | 18989813 | 18989819 | 7mer-m8 | 18989797 | 18989820 | 143 | -20.01 |
CAediting_1460069 | chr22_18989817_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4314 | 18989812 | 18989818 | 7mer-m8 | 18989801 | 18989819 | 143 | -20.84 |
CAediting_1460069 | chr22_18989817_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-514a-5p | 18989814 | 18989820 | 7mer-m8 | 18989798 | 18989821 | 150 | -18.62 |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1460059 | chr22_18989696_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-20b-3p | 18989693 | 18989699 | 7mer-m8 | 18989678 | 18989700 | 155 | -16.42 |
CAediting_1460065 | chr22_18989763_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-3064-5p | 18989763 | 18989769 | 7mer-1a | 18989749 | 18989769 | 144 | -24.6 |
CAediting_1460066 | chr22_18989767_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-3064-5p | 18989763 | 18989769 | 7mer-1a | 18989749 | 18989769 | 144 | -24.6 |
CAediting_1460068 | chr22_18989808_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4478 | 18989806 | 18989812 | 7mer-m8 | 18989796 | 18989813 | 150 | -22 |
CAediting_1460068 | chr22_18989808_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4649-3p | 18989803 | 18989809 | 7mer-m8 | 18989790 | 18989810 | 140 | -11.96 |
CAediting_1460065 | chr22_18989763_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4794 | 18989762 | 18989769 | 8mer-1a | 18989747 | 18989769 | 151 | -22.13 |
CAediting_1460066 | chr22_18989767_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4794 | 18989762 | 18989769 | 8mer-1a | 18989747 | 18989769 | 151 | -22.13 |
CAediting_1460072 | chr22_18990330_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-520g-5p | 18990326 | 18990331 | 6mer | 18990309 | 18990332 | 144 | -16.87 |
CAediting_1460063 | chr22_18989741_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-593-3p | 18989741 | 18989746 | 6mer | 18989729 | 18989747 | 140 | -18.96 |
CAediting_1460065 | chr22_18989763_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-664a-5p | 18989762 | 18989769 | 8mer-1a | 18989746 | 18989769 | 141 | -16.17 |
CAediting_1460066 | chr22_18989767_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-664a-5p | 18989762 | 18989769 | 8mer-1a | 18989746 | 18989769 | 141 | -16.17 |
CAediting_1460068 | chr22_18989808_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6765-5p | 18989802 | 18989808 | 7mer-m8 | 18989783 | 18989809 | 153 | -27.61 |
CAediting_1460068 | chr22_18989808_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-7160-5p | 18989804 | 18989810 | 7mer-m8 | 18989794 | 18989811 | 144 | -18.86 |
CAediting_1460069 | chr22_18989817_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-887-5p | 18989811 | 18989818 | 8mer-1a | 18989799 | 18989818 | 143 | -13.53 |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_846604 | chr11_93733708_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1304-3p | 18991868 | 18991874 | 7mer-m8 | 18991854 | 18991875 | 152 | -23.13 |
CAediting_846604 | chr11_93733708_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1304-3p | 18994145 | 18994151 | 7mer-m8 | 18994131 | 18994152 | 148 | -15.3 |
CAediting_688080 | chr9_63819626_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4477b | 18994556 | 18994563 | 8mer-1a | 18994542 | 18994563 | 144 | -9.2 |
CAediting_846604 | chr11_93733708_- | ENSG00000237517.7 | ENST00000440005.5 | hsa-miR-1304-3p | 18991868 | 18991874 | 7mer-m8 | 18991854 | 18991875 | 152 | -23.13 |
CAediting_1054808 | chr15_66496985_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4512 | 18990721 | 18990727 | 7mer-m8 | 18990708 | 18990728 | 156 | -24 |
CAediting_1054808 | chr15_66496985_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4512 | 18990795 | 18990801 | 7mer-m8 | 18990781 | 18990802 | 150 | -29.84 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548aa | 18989771 | 18989777 | 7mer-m8 | 18989754 | 18989778 | 141 | -11.69 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548aa | 18992717 | 18992724 | 8mer-1a | 18992700 | 18992724 | 142 | -13.64 |
CAediting_1160181 | chr17_7017644_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-195-3p | 18991134 | 18991140 | 7mer-m8 | 18991117 | 18991141 | 157 | -18.16 |
CAediting_1160181 | chr17_7017644_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-195-3p | 18993864 | 18993870 | 7mer-m8 | 18993850 | 18993871 | 143 | -10.09 |
CAediting_1351755 | chr19_40282625_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-641 | 18992104 | 18992109 | 6mer | 18992086 | 18992110 | 144 | -20.82 |
CAediting_1368054 | chr19_46709310_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-320e | 18993556 | 18993562 | 7mer-m8 | 18993545 | 18993563 | 152 | -21.76 |
CAediting_1368054 | chr19_46709310_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-320e | 18989941 | 18989947 | 7mer-m8 | 18989932 | 18989948 | 145 | -17.63 |
CAediting_77128 | chr1_85133844_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4423-3p | 18990214 | 18990220 | 7mer-m8 | 18990201 | 18990221 | 150 | -18.14 |
CAediting_77128 | chr1_85133844_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4423-3p | 18992525 | 18992531 | 7mer-m8 | 18992512 | 18992532 | 144 | -13.6 |
CAediting_228905 | chr2_188297554_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-561-3p | 18990171 | 18990178 | 8mer-1a | 18990157 | 18990178 | 162 | -14.31 |
CAediting_396018 | chr5_1062918_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4635 | 18992452 | 18992458 | 7mer-m8 | 18992439 | 18992459 | 140 | -12.4 |
CAediting_580943 | chr7_100356700_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6840-3p | 18993567 | 18993573 | 7mer-m8 | 18993553 | 18993574 | 160 | -32.08 |
CAediting_580943 | chr7_100356700_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6840-3p | 18989644 | 18989650 | 7mer-m8 | 18989630 | 18989651 | 144 | -27.77 |
CAediting_524911 | chr7_5495852_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-589-3p | 18990482 | 18990489 | 8mer-1a | 18990468 | 18990489 | 154 | -19.95 |
CAediting_524911 | chr7_5495852_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-589-3p | 18991649 | 18991655 | 7mer-m8 | 18991633 | 18991656 | 140 | -14.88 |
CAediting_524911 | chr7_5495852_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-589-3p | 18991795 | 18991801 | 7mer-m8 | 18991779 | 18991802 | 144 | -14.97 |
CAediting_524911 | chr7_5495852_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-589-3p | 18992143 | 18992149 | 7mer-m8 | 18992125 | 18992150 | 151 | -21.96 |
CAediting_524911 | chr7_5495852_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-589-3p | 18993043 | 18993049 | 7mer-m8 | 18993024 | 18993050 | 153 | -19.93 |
CAediting_573000 | chr7_92204081_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1285-5p | 18993902 | 18993908 | 7mer-m8 | 18993889 | 18993909 | 154 | -16.13 |
CAediting_396018 | chr5_1062918_- | ENSG00000237517.7 | ENST00000424407.1 | hsa-miR-4635 | 19002911 | 19002917 | 7mer-m8 | 19002899 | 19002918 | 146 | -19.13 |
CAediting_1054808 | chr15_66496985_- | ENSG00000237517.7 | ENST00000440005.5 | hsa-miR-4512 | 18990721 | 18990727 | 7mer-m8 | 18987889 | 18990728 | 147 | -15.51 |
CAediting_1054808 | chr15_66496985_- | ENSG00000237517.7 | ENST00000440005.5 | hsa-miR-4512 | 18990795 | 18990801 | 7mer-m8 | 18990781 | 18990802 | 150 | -29.84 |
CAediting_468389 | chr6_31355314_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6891-5p | 18994554 | 18994561 | 8mer-1a | 18994543 | 18994561 | 154 | -26 |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_573000 | chr7_92204081_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1285-5p | 18994496 | 18994502 | 7mer-m8 | 18994482 | 18994503 | 144 | -13.51 |
CAediting_573001 | chr7_92204086_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1285-5p | 18994496 | 18994502 | 7mer-m8 | 18994482 | 18994503 | 144 | -13.51 |
CAediting_846604 | chr11_93733708_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1304-3p | 18992131 | 18992137 | 7mer-m8 | 18992118 | 18992138 | 142 | -17.91 |
CAediting_846604 | chr11_93733708_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-1304-3p | 18993813 | 18993819 | 7mer-m8 | 18993794 | 18993820 | 152 | -25.69 |
CAediting_86358 | chr1_109598906_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-197-5p | 18993925 | 18993931 | 7mer-m8 | 18993910 | 18993932 | 140 | -17.17 |
CAediting_1306324 | chr19_13836464_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-27a-3p | 18991044 | 18991050 | 7mer-m8 | 18991032 | 18991051 | 149 | -15.47 |
CAediting_1306323 | chr19_13836462_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-27a-3p | 18991044 | 18991050 | 7mer-m8 | 18991032 | 18991051 | 149 | -15.47 |
CAediting_1368054 | chr19_46709310_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-320e | 18994463 | 18994469 | 7mer-m8 | 18994452 | 18994470 | 141 | -13.52 |
CAediting_1054808 | chr15_66496985_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4512 | 18993836 | 18993841 | 6mer | 18993821 | 18993842 | 148 | -26.01 |
CAediting_396018 | chr5_1062918_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-4635 | 18994407 | 18994413 | 7mer-m8 | 18994394 | 18994414 | 146 | -16.18 |
CAediting_1524209 | chrX_134546392_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-503-5p | 18991275 | 18991280 | 6mer | 18991258 | 18991281 | 147 | -23.08 |
CAediting_1524209 | chrX_134546392_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-503-5p | 18994155 | 18994160 | 6mer | 18994139 | 18994161 | 145 | -28.47 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548aa | 18992990 | 18992996 | 7mer-m8 | 18992968 | 18992997 | 151 | -14.12 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548aa | 18992990 | 18992996 | 7mer-m8 | 18992968 | 18992997 | 151 | -14.12 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-548aa | 18992990 | 18992996 | 7mer-m8 | 18992968 | 18992997 | 151 | -14.12 |
CAediting_524911 | chr7_5495852_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-589-3p | 18991963 | 18991969 | 7mer-m8 | 18991945 | 18991970 | 149 | -15.42 |
CAediting_524911 | chr7_5495852_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-589-3p | 18992558 | 18992564 | 7mer-m8 | 18992542 | 18992565 | 142 | -16.67 |
CAediting_748296 | chr10_51299626_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-605-3p | 18991564 | 18991570 | 7mer-m8 | 18991545 | 18991571 | 149 | -17.74 |
CAediting_1351755 | chr19_40282625_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-641 | 18991487 | 18991492 | 6mer | 18991469 | 18991493 | 149 | -17.24 |
CAediting_1351755 | chr19_40282625_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-641 | 18989862 | 18989868 | 7mer-1a | 18989843 | 18989868 | 144 | -14.09 |
CAediting_580943 | chr7_100356700_+ | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6840-3p | 18993366 | 18993372 | 7mer-m8 | 18993352 | 18993373 | 145 | -19.61 |
CAediting_468389 | chr6_31355314_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6891-5p | 18990365 | 18990371 | 7mer-m8 | 18990354 | 18990372 | 152 | -19.31 |
CAediting_468389 | chr6_31355314_- | ENSG00000237517.7 | ENST00000438934.4 | hsa-miR-6891-5p | 18987860 | 18987865 | 6mer | 18987848 | 18987866 | 143 | -22.78 |
CAediting_77128 | chr1_85133844_+ | ENSG00000237517.7 | ENST00000440005.5 | hsa-miR-4423-3p | 19031065 | 19031071 | 7mer-m8 | 19031052 | 19031072 | 148 | -16.3 |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for DGCR5 |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for DGCR5 |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for DGCR5 |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for DGCR5 |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for DGCR5 |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DGCR5 |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |