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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: SERBP1 (CAeditome ID:26135) |
Gene summary for SERBP1 |
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Gene information | Gene symbol | SERBP1 | Gene ID | 26135 |
Gene name | SERPINE1 mRNA binding protein 1 | |
Synonyms | CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 | |
Cytomap | 1p31.3 | |
Type of gene | protein-coding | |
Description | plasminogen activator inhibitor 1 RNA-binding proteinPAI-1 mRNA binding proteinPAI1 RNA-binding protein 1chromodomain helicase DNA binding protein 3 interacting protein | |
Modification date | 20210518 | |
UniProtAcc | Q8NC51 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
SERBP1 | GO:0003730 | Plasminogen activator inhibitor 1 RNA-binding protein | 11001948 |
SERBP1 | GO:0032183 | Plasminogen activator inhibitor 1 RNA-binding protein | 28695742 |
SERBP1 | GO:0043022 | Plasminogen activator inhibitor 1 RNA-binding protein | 23636399 |
SERBP1 | GO:0030578 | Plasminogen activator inhibitor 1 RNA-binding protein | 28695742 |
SERBP1 | GO:0005634 | Plasminogen activator inhibitor 1 RNA-binding protein | 16879614 |
SERBP1 | GO:0005737 | Plasminogen activator inhibitor 1 RNA-binding protein | 16879614 |
SERBP1 | GO:0005829 | Plasminogen activator inhibitor 1 RNA-binding protein | 0000052 |
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RNA A-to-I events for SERBP1 |
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CAediting_73457(67409008, -), CAediting_73458(67409011, -), CAediting_73459(67409014, -), CAediting_73460(67409018, -), CAediting_73461(67409022, -), CAediting_73462(67409035, -), CAediting_73463(67409042, -), CAediting_73464(67409043, -), CAediting_73465(67409051, -), CAediting_73466(67409052, -), CAediting_73467(67409077, -), CAediting_73468(67409112, -), CAediting_73469(67409142, -), CAediting_73470(67409145, -), CAediting_73471(67409146, -), CAediting_73472(67409159, -), CAediting_73473(67409166, -), CAediting_73474(67409171, -), CAediting_73475(67409176, -), CAediting_73476(67409195, -), CAediting_73477(67409202, -), CAediting_73478(67409206, -), CAediting_73479(67409220, -), CAediting_73480(67409222, -), CAediting_73481(67409224, -), CAediting_73482(67411106, -), CAediting_73483(67412008, -), CAediting_73484(67412054, -), CAediting_73485(67413383, -), CAediting_73486(67413404, -), CAediting_73487(67413445, -), CAediting_73488(67413446, -), CAediting_73489(67413457, -), CAediting_73490(67413469, -), CAediting_73491(67413526, -), CAediting_73492(67413528, -), CAediting_73493(67413537, -), CAediting_73494(67413562, -), CAediting_73495(67413566, -), CAediting_73496(67413567, -), CAediting_73497(67413573, -), CAediting_73498(67413586, -), CAediting_73499(67413592, -), CAediting_73500(67413603, -), CAediting_73501(67413635, -), CAediting_73502(67413815, -), CAediting_73503(67413836, -), CAediting_73504(67413837, -), CAediting_73505(67413842, -), CAediting_73506(67413848, -), CAediting_73507(67413859, -), CAediting_73508(67413864, -), CAediting_73509(67413869, -), CAediting_73510(67413878, -), CAediting_73511(67413879, -), CAediting_73512(67413883, -), CAediting_73513(67413899, -), CAediting_73514(67413903, -), CAediting_73515(67413904, -), CAediting_73516(67413922, -), CAediting_73517(67413943, -), CAediting_73518(67413944, -), CAediting_73519(67413966, -), CAediting_73520(67413970, -), CAediting_73521(67414003, -), CAediting_73522(67414006, -), CAediting_73523(67414008, -), CAediting_73524(67414013, -), CAediting_73525(67414022, -), CAediting_73526(67414032, -), CAediting_73527(67414063, -), CAediting_73528(67414071, -), CAediting_73529(67416084, -), CAediting_73530(67416089, -), CAediting_73531(67416121, -), CAediting_73532(67416263, -), CAediting_73533(67416286, -), CAediting_73534(67416294, -), CAediting_73535(67417005, -), CAediting_73536(67417019, -), CAediting_73537(67417044, -), CAediting_73538(67417049, -), CAediting_73539(67417084, -), CAediting_73540(67417093, -), CAediting_73541(67417098, -), CAediting_73542(67417110, -), CAediting_73543(67417111, -), CAediting_73544(67417125, -), CAediting_73545(67417126, -), CAediting_73546(67417132, -), CAediting_73547(67417137, -), CAediting_73548(67417142, -), CAediting_73549(67417150, -), CAediting_73550(67417153, -), CAediting_73551(67417160, -), CAediting_73552(67417540, -), CAediting_73553(67417546, -), CAediting_73554(67417557, -), CAediting_73555(67417574, -), CAediting_73556(67417578, -), CAediting_73557(67417579, -), CAediting_73558(67417587, -), CAediting_73559(67417596, -), CAediting_73560(67417603, -), CAediting_73561(67417608, -), CAediting_73562(67417613, -), CAediting_73563(67417645, -), CAediting_73564(67417657, -), CAediting_73565(67417690, -), CAediting_73566(67417709, -), CAediting_73567(67417783, -), CAediting_73568(67417784, -), CAediting_73569(67417790, -), CAediting_73570(67417792, -), CAediting_73571(67418005, -), CAediting_73572(67418011, -), CAediting_73573(67418014, -), CAediting_73574(67418036, -), CAediting_73575(67418043, -), CAediting_73576(67418052, -), CAediting_73577(67418061, -), CAediting_73578(67418068, -), CAediting_73579(67418072, -), CAediting_73580(67418073, -), CAediting_73581(67418078, -), CAediting_73582(67418104, -), CAediting_73583(67418108, -), CAediting_73584(67418113, -), CAediting_73585(67418114, -), CAediting_73586(67418140, -), CAediting_73587(67418143, -), CAediting_73588(67418145, -), CAediting_73589(67418152, -), CAediting_73590(67418153, -), CAediting_73591(67418154, -), CAediting_73592(67418168, -), CAediting_73593(67418169, -), CAediting_73594(67418172, -), CAediting_73595(67418176, -), CAediting_73596(67418178, -), CAediting_73597(67418182, -), CAediting_73598(67418194, -), CAediting_73599(67418207, -), CAediting_73600(67418229, -), CAediting_73601(67418231, -), CAediting_73602(67418248, -), CAediting_73603(67418271, -), CAediting_73604(67418485, -), CAediting_73605(67418555, -), CAediting_73606(67418556, -), CAediting_73607(67418567, -), CAediting_73608(67418586, -), CAediting_73609(67418591, -), CAediting_73610(67418593, -), CAediting_73611(67418596, -), CAediting_73612(67418611, -), CAediting_73613(67418637, -), CAediting_73614(67418659, -), CAediting_73615(67418675, -), CAediting_73616(67418712, -), CAediting_73617(67418715, -), CAediting_73618(67418725, -), CAediting_73619(67422302, -), CAediting_73620(67422383, -), CAediting_73621(67422387, -), CAediting_73622(67422680, -), CAediting_73623(67422848, -), |
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RNA editing positional annotations for SERBP1 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_73457 | chr1_67409008_- | UTR3 |
CAediting_73458 | chr1_67409011_- | UTR3 |
CAediting_73459 | chr1_67409014_- | UTR3 |
CAediting_73460 | chr1_67409018_- | UTR3 |
CAediting_73461 | chr1_67409022_- | UTR3 |
CAediting_73462 | chr1_67409035_- | UTR3 |
CAediting_73463 | chr1_67409042_- | UTR3 |
CAediting_73464 | chr1_67409043_- | UTR3 |
CAediting_73465 | chr1_67409051_- | UTR3 |
CAediting_73466 | chr1_67409052_- | UTR3 |
CAediting_73467 | chr1_67409077_- | UTR3 |
CAediting_73468 | chr1_67409112_- | UTR3 |
CAediting_73469 | chr1_67409142_- | UTR3 |
CAediting_73470 | chr1_67409145_- | UTR3 |
CAediting_73471 | chr1_67409146_- | UTR3 |
CAediting_73472 | chr1_67409159_- | UTR3 |
CAediting_73473 | chr1_67409166_- | UTR3 |
CAediting_73474 | chr1_67409171_- | UTR3 |
CAediting_73475 | chr1_67409176_- | UTR3 |
CAediting_73476 | chr1_67409195_- | UTR3 |
CAediting_73477 | chr1_67409202_- | UTR3 |
CAediting_73478 | chr1_67409206_- | UTR3 |
CAediting_73479 | chr1_67409220_- | UTR3 |
CAediting_73480 | chr1_67409222_- | UTR3 |
CAediting_73481 | chr1_67409224_- | UTR3 |
CAediting_73482 | chr1_67411106_- | UTR3 |
CAediting_73483 | chr1_67412008_- | UTR3 |
CAediting_73484 | chr1_67412054_- | UTR3 |
CAediting_73485 | chr1_67413383_- | ncRNA_intronic |
CAediting_73486 | chr1_67413404_- | ncRNA_intronic |
CAediting_73487 | chr1_67413445_- | ncRNA_intronic |
CAediting_73488 | chr1_67413446_- | ncRNA_intronic |
CAediting_73489 | chr1_67413457_- | ncRNA_intronic |
CAediting_73490 | chr1_67413469_- | ncRNA_intronic |
CAediting_73491 | chr1_67413526_- | ncRNA_intronic |
CAediting_73492 | chr1_67413528_- | ncRNA_intronic |
CAediting_73493 | chr1_67413537_- | ncRNA_intronic |
CAediting_73494 | chr1_67413562_- | ncRNA_intronic |
CAediting_73495 | chr1_67413566_- | ncRNA_intronic |
CAediting_73496 | chr1_67413567_- | ncRNA_intronic |
CAediting_73497 | chr1_67413573_- | ncRNA_intronic |
CAediting_73498 | chr1_67413586_- | ncRNA_intronic |
CAediting_73499 | chr1_67413592_- | ncRNA_intronic |
CAediting_73500 | chr1_67413603_- | ncRNA_intronic |
CAediting_73501 | chr1_67413635_- | ncRNA_intronic |
CAediting_73502 | chr1_67413815_- | ncRNA_intronic |
CAediting_73503 | chr1_67413836_- | ncRNA_intronic |
CAediting_73504 | chr1_67413837_- | ncRNA_intronic |
CAediting_73505 | chr1_67413842_- | ncRNA_intronic |
CAediting_73506 | chr1_67413848_- | ncRNA_intronic |
CAediting_73507 | chr1_67413859_- | ncRNA_intronic |
CAediting_73508 | chr1_67413864_- | ncRNA_intronic |
CAediting_73509 | chr1_67413869_- | ncRNA_intronic |
CAediting_73510 | chr1_67413878_- | ncRNA_intronic |
CAediting_73511 | chr1_67413879_- | ncRNA_intronic |
CAediting_73512 | chr1_67413883_- | ncRNA_intronic |
CAediting_73513 | chr1_67413899_- | ncRNA_intronic |
CAediting_73514 | chr1_67413903_- | ncRNA_intronic |
CAediting_73515 | chr1_67413904_- | ncRNA_intronic |
CAediting_73516 | chr1_67413922_- | ncRNA_intronic |
CAediting_73517 | chr1_67413943_- | ncRNA_intronic |
CAediting_73518 | chr1_67413944_- | ncRNA_intronic |
CAediting_73519 | chr1_67413966_- | ncRNA_intronic |
CAediting_73520 | chr1_67413970_- | ncRNA_intronic |
CAediting_73521 | chr1_67414003_- | ncRNA_intronic |
CAediting_73522 | chr1_67414006_- | ncRNA_intronic |
CAediting_73523 | chr1_67414008_- | ncRNA_intronic |
CAediting_73524 | chr1_67414013_- | ncRNA_intronic |
CAediting_73525 | chr1_67414022_- | ncRNA_intronic |
CAediting_73526 | chr1_67414032_- | ncRNA_intronic |
CAediting_73527 | chr1_67414063_- | ncRNA_intronic |
CAediting_73528 | chr1_67414071_- | ncRNA_intronic |
CAediting_73529 | chr1_67416084_- | ncRNA_intronic |
CAediting_73530 | chr1_67416089_- | ncRNA_intronic |
CAediting_73531 | chr1_67416121_- | ncRNA_intronic |
CAediting_73532 | chr1_67416263_- | ncRNA_intronic |
CAediting_73533 | chr1_67416286_- | ncRNA_intronic |
CAediting_73534 | chr1_67416294_- | ncRNA_intronic |
CAediting_73535 | chr1_67417005_- | ncRNA_intronic |
CAediting_73536 | chr1_67417019_- | ncRNA_intronic |
CAediting_73537 | chr1_67417044_- | ncRNA_intronic |
CAediting_73538 | chr1_67417049_- | ncRNA_intronic |
CAediting_73539 | chr1_67417084_- | ncRNA_intronic |
CAediting_73540 | chr1_67417093_- | ncRNA_intronic |
CAediting_73541 | chr1_67417098_- | ncRNA_intronic |
CAediting_73542 | chr1_67417110_- | ncRNA_intronic |
CAediting_73543 | chr1_67417111_- | ncRNA_intronic |
CAediting_73544 | chr1_67417125_- | ncRNA_intronic |
CAediting_73545 | chr1_67417126_- | ncRNA_intronic |
CAediting_73546 | chr1_67417132_- | ncRNA_intronic |
CAediting_73547 | chr1_67417137_- | ncRNA_intronic |
CAediting_73548 | chr1_67417142_- | ncRNA_intronic |
CAediting_73549 | chr1_67417150_- | ncRNA_intronic |
CAediting_73550 | chr1_67417153_- | ncRNA_intronic |
CAediting_73551 | chr1_67417160_- | ncRNA_intronic |
CAediting_73552 | chr1_67417540_- | ncRNA_intronic |
CAediting_73553 | chr1_67417546_- | ncRNA_intronic |
CAediting_73554 | chr1_67417557_- | ncRNA_intronic |
CAediting_73555 | chr1_67417574_- | ncRNA_intronic |
CAediting_73556 | chr1_67417578_- | ncRNA_intronic |
CAediting_73557 | chr1_67417579_- | ncRNA_intronic |
CAediting_73558 | chr1_67417587_- | ncRNA_intronic |
CAediting_73559 | chr1_67417596_- | ncRNA_intronic |
CAediting_73560 | chr1_67417603_- | ncRNA_intronic |
CAediting_73561 | chr1_67417608_- | ncRNA_intronic |
CAediting_73562 | chr1_67417613_- | ncRNA_intronic |
CAediting_73563 | chr1_67417645_- | ncRNA_intronic |
CAediting_73564 | chr1_67417657_- | ncRNA_intronic |
CAediting_73565 | chr1_67417690_- | ncRNA_intronic |
CAediting_73566 | chr1_67417709_- | ncRNA_intronic |
CAediting_73567 | chr1_67417783_- | ncRNA_intronic |
CAediting_73568 | chr1_67417784_- | ncRNA_intronic |
CAediting_73569 | chr1_67417790_- | ncRNA_intronic |
CAediting_73570 | chr1_67417792_- | ncRNA_intronic |
CAediting_73571 | chr1_67418005_- | ncRNA_intronic |
CAediting_73572 | chr1_67418011_- | ncRNA_intronic |
CAediting_73573 | chr1_67418014_- | ncRNA_intronic |
CAediting_73574 | chr1_67418036_- | ncRNA_intronic |
CAediting_73575 | chr1_67418043_- | ncRNA_intronic |
CAediting_73576 | chr1_67418052_- | ncRNA_intronic |
CAediting_73577 | chr1_67418061_- | ncRNA_intronic |
CAediting_73578 | chr1_67418068_- | ncRNA_intronic |
CAediting_73579 | chr1_67418072_- | ncRNA_intronic |
CAediting_73580 | chr1_67418073_- | ncRNA_intronic |
CAediting_73581 | chr1_67418078_- | ncRNA_intronic |
CAediting_73582 | chr1_67418104_- | ncRNA_intronic |
CAediting_73583 | chr1_67418108_- | ncRNA_intronic |
CAediting_73584 | chr1_67418113_- | ncRNA_intronic |
CAediting_73585 | chr1_67418114_- | ncRNA_intronic |
CAediting_73586 | chr1_67418140_- | ncRNA_intronic |
CAediting_73587 | chr1_67418143_- | ncRNA_intronic |
CAediting_73588 | chr1_67418145_- | ncRNA_intronic |
CAediting_73589 | chr1_67418152_- | ncRNA_intronic |
CAediting_73590 | chr1_67418153_- | ncRNA_intronic |
CAediting_73591 | chr1_67418154_- | ncRNA_intronic |
CAediting_73592 | chr1_67418168_- | ncRNA_intronic |
CAediting_73593 | chr1_67418169_- | ncRNA_intronic |
CAediting_73594 | chr1_67418172_- | ncRNA_intronic |
CAediting_73595 | chr1_67418176_- | ncRNA_intronic |
CAediting_73596 | chr1_67418178_- | ncRNA_intronic |
CAediting_73597 | chr1_67418182_- | ncRNA_intronic |
CAediting_73598 | chr1_67418194_- | ncRNA_intronic |
CAediting_73599 | chr1_67418207_- | ncRNA_intronic |
CAediting_73600 | chr1_67418229_- | ncRNA_intronic |
CAediting_73601 | chr1_67418231_- | ncRNA_intronic |
CAediting_73602 | chr1_67418248_- | ncRNA_intronic |
CAediting_73603 | chr1_67418271_- | ncRNA_intronic |
CAediting_73604 | chr1_67418485_- | ncRNA_intronic |
CAediting_73605 | chr1_67418555_- | ncRNA_intronic |
CAediting_73606 | chr1_67418556_- | ncRNA_intronic |
CAediting_73607 | chr1_67418567_- | ncRNA_intronic |
CAediting_73608 | chr1_67418586_- | ncRNA_intronic |
CAediting_73609 | chr1_67418591_- | ncRNA_intronic |
CAediting_73610 | chr1_67418593_- | ncRNA_intronic |
CAediting_73611 | chr1_67418596_- | ncRNA_intronic |
CAediting_73612 | chr1_67418611_- | ncRNA_intronic |
CAediting_73613 | chr1_67418637_- | ncRNA_intronic |
CAediting_73614 | chr1_67418659_- | ncRNA_intronic |
CAediting_73615 | chr1_67418675_- | ncRNA_intronic |
CAediting_73616 | chr1_67418712_- | ncRNA_intronic |
CAediting_73617 | chr1_67418715_- | ncRNA_intronic |
CAediting_73618 | chr1_67418725_- | ncRNA_intronic |
CAediting_73619 | chr1_67422302_- | ncRNA_intronic |
CAediting_73620 | chr1_67422383_- | ncRNA_intronic |
CAediting_73621 | chr1_67422387_- | ncRNA_intronic |
CAediting_73622 | chr1_67422680_- | ncRNA_intronic |
CAediting_73623 | chr1_67422848_- | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_73457 | chr1_67409008_- | SINE | Alu | AluSz6 |
CAediting_73458 | chr1_67409011_- | SINE | Alu | AluSz6 |
CAediting_73459 | chr1_67409014_- | SINE | Alu | AluSz6 |
CAediting_73460 | chr1_67409018_- | SINE | Alu | AluSz6 |
CAediting_73461 | chr1_67409022_- | SINE | Alu | AluSz6 |
CAediting_73462 | chr1_67409035_- | SINE | Alu | AluSz6 |
CAediting_73463 | chr1_67409042_- | SINE | Alu | AluSz6 |
CAediting_73464 | chr1_67409043_- | SINE | Alu | AluSz6 |
CAediting_73465 | chr1_67409051_- | SINE | Alu | AluSz6 |
CAediting_73466 | chr1_67409052_- | SINE | Alu | AluSz6 |
CAediting_73468 | chr1_67409112_- | SINE | Alu | AluSz6 |
CAediting_73469 | chr1_67409142_- | SINE | Alu | AluSz6 |
CAediting_73470 | chr1_67409145_- | SINE | Alu | AluSz6 |
CAediting_73471 | chr1_67409146_- | SINE | Alu | AluSz6 |
CAediting_73472 | chr1_67409159_- | SINE | Alu | AluSz6 |
CAediting_73473 | chr1_67409166_- | SINE | Alu | AluSz6 |
CAediting_73474 | chr1_67409171_- | SINE | Alu | AluSz6 |
CAediting_73475 | chr1_67409176_- | SINE | Alu | AluSz6 |
CAediting_73476 | chr1_67409195_- | SINE | Alu | AluSz6 |
CAediting_73477 | chr1_67409202_- | SINE | Alu | AluSz6 |
CAediting_73478 | chr1_67409206_- | SINE | Alu | AluSz6 |
CAediting_73479 | chr1_67409220_- | SINE | Alu | AluSz6 |
CAediting_73480 | chr1_67409222_- | SINE | Alu | AluSz6 |
CAediting_73481 | chr1_67409224_- | SINE | Alu | AluSz6 |
CAediting_73485 | chr1_67413383_- | SINE | Alu | AluSx1 |
CAediting_73486 | chr1_67413404_- | SINE | Alu | AluSx1 |
CAediting_73487 | chr1_67413445_- | SINE | Alu | AluSx1 |
CAediting_73488 | chr1_67413446_- | SINE | Alu | AluSx1 |
CAediting_73489 | chr1_67413457_- | SINE | Alu | AluSx1 |
CAediting_73490 | chr1_67413469_- | SINE | Alu | AluSx1 |
CAediting_73491 | chr1_67413526_- | SINE | Alu | AluSx1 |
CAediting_73492 | chr1_67413528_- | SINE | Alu | AluSx1 |
CAediting_73493 | chr1_67413537_- | SINE | Alu | AluSx1 |
CAediting_73494 | chr1_67413562_- | SINE | Alu | AluSx1 |
CAediting_73495 | chr1_67413566_- | SINE | Alu | AluSx1 |
CAediting_73496 | chr1_67413567_- | SINE | Alu | AluSx1 |
CAediting_73497 | chr1_67413573_- | SINE | Alu | AluSx1 |
CAediting_73498 | chr1_67413586_- | SINE | Alu | AluSx1 |
CAediting_73499 | chr1_67413592_- | SINE | Alu | AluSx1 |
CAediting_73500 | chr1_67413603_- | SINE | Alu | AluSx1 |
CAediting_73501 | chr1_67413635_- | SINE | Alu | AluSx1 |
CAediting_73502 | chr1_67413815_- | SINE | Alu | AluSx |
CAediting_73503 | chr1_67413836_- | SINE | Alu | AluSx |
CAediting_73504 | chr1_67413837_- | SINE | Alu | AluSx |
CAediting_73505 | chr1_67413842_- | SINE | Alu | AluSx |
CAediting_73506 | chr1_67413848_- | SINE | Alu | AluSx |
CAediting_73507 | chr1_67413859_- | SINE | Alu | AluSx |
CAediting_73508 | chr1_67413864_- | SINE | Alu | AluSx |
CAediting_73509 | chr1_67413869_- | SINE | Alu | AluSx |
CAediting_73510 | chr1_67413878_- | SINE | Alu | AluSx |
CAediting_73511 | chr1_67413879_- | SINE | Alu | AluSx |
CAediting_73512 | chr1_67413883_- | SINE | Alu | AluSx |
CAediting_73513 | chr1_67413899_- | SINE | Alu | AluSx |
CAediting_73514 | chr1_67413903_- | SINE | Alu | AluSx |
CAediting_73515 | chr1_67413904_- | SINE | Alu | AluSx |
CAediting_73516 | chr1_67413922_- | SINE | Alu | AluSx |
CAediting_73517 | chr1_67413943_- | SINE | Alu | AluSx |
CAediting_73518 | chr1_67413944_- | SINE | Alu | AluSx |
CAediting_73519 | chr1_67413966_- | SINE | Alu | AluSx |
CAediting_73520 | chr1_67413970_- | SINE | Alu | AluSx |
CAediting_73521 | chr1_67414003_- | SINE | Alu | AluSx |
CAediting_73522 | chr1_67414006_- | SINE | Alu | AluSx |
CAediting_73523 | chr1_67414008_- | SINE | Alu | AluSx |
CAediting_73524 | chr1_67414013_- | SINE | Alu | AluSx |
CAediting_73525 | chr1_67414022_- | SINE | Alu | AluSx |
CAediting_73526 | chr1_67414032_- | SINE | Alu | AluSx |
CAediting_73527 | chr1_67414063_- | SINE | Alu | AluSx |
CAediting_73528 | chr1_67414071_- | SINE | Alu | AluSx |
CAediting_73529 | chr1_67416084_- | SINE | Alu | AluJb |
CAediting_73530 | chr1_67416089_- | SINE | Alu | AluJb |
CAediting_73531 | chr1_67416121_- | SINE | Alu | AluJb |
CAediting_73532 | chr1_67416263_- | SINE | Alu | AluJb |
CAediting_73533 | chr1_67416286_- | SINE | Alu | AluJb |
CAediting_73534 | chr1_67416294_- | SINE | Alu | AluJb |
CAediting_73535 | chr1_67417005_- | SINE | Alu | AluJb |
CAediting_73536 | chr1_67417019_- | SINE | Alu | AluJb |
CAediting_73537 | chr1_67417044_- | SINE | Alu | AluJb |
CAediting_73538 | chr1_67417049_- | SINE | Alu | AluJb |
CAediting_73539 | chr1_67417084_- | SINE | Alu | AluJb |
CAediting_73540 | chr1_67417093_- | SINE | Alu | AluJb |
CAediting_73541 | chr1_67417098_- | SINE | Alu | AluJb |
CAediting_73542 | chr1_67417110_- | SINE | Alu | AluJb |
CAediting_73543 | chr1_67417111_- | SINE | Alu | AluJb |
CAediting_73544 | chr1_67417125_- | SINE | Alu | AluJb |
CAediting_73545 | chr1_67417126_- | SINE | Alu | AluJb |
CAediting_73546 | chr1_67417132_- | SINE | Alu | AluJb |
CAediting_73547 | chr1_67417137_- | SINE | Alu | AluJb |
CAediting_73548 | chr1_67417142_- | SINE | Alu | AluJb |
CAediting_73549 | chr1_67417150_- | SINE | Alu | AluJb |
CAediting_73550 | chr1_67417153_- | SINE | Alu | AluJb |
CAediting_73551 | chr1_67417160_- | SINE | Alu | AluJb |
CAediting_73552 | chr1_67417540_- | SINE | Alu | AluSz |
CAediting_73553 | chr1_67417546_- | SINE | Alu | AluSz |
CAediting_73554 | chr1_67417557_- | SINE | Alu | AluSz |
CAediting_73555 | chr1_67417574_- | SINE | Alu | AluSz |
CAediting_73556 | chr1_67417578_- | SINE | Alu | AluSz |
CAediting_73557 | chr1_67417579_- | SINE | Alu | AluSz |
CAediting_73558 | chr1_67417587_- | SINE | Alu | AluSz |
CAediting_73559 | chr1_67417596_- | SINE | Alu | AluSz |
CAediting_73560 | chr1_67417603_- | SINE | Alu | AluSz |
CAediting_73561 | chr1_67417608_- | SINE | Alu | AluSz |
CAediting_73562 | chr1_67417613_- | SINE | Alu | AluSz |
CAediting_73563 | chr1_67417645_- | SINE | Alu | AluSz |
CAediting_73564 | chr1_67417657_- | SINE | Alu | AluSz |
CAediting_73565 | chr1_67417690_- | SINE | Alu | AluSz |
CAediting_73566 | chr1_67417709_- | SINE | Alu | AluSz |
CAediting_73567 | chr1_67417783_- | SINE | Alu | AluSz |
CAediting_73568 | chr1_67417784_- | SINE | Alu | AluSz |
CAediting_73569 | chr1_67417790_- | SINE | Alu | AluSz |
CAediting_73570 | chr1_67417792_- | SINE | Alu | AluSz |
CAediting_73571 | chr1_67418005_- | SINE | Alu | AluSx |
CAediting_73572 | chr1_67418011_- | SINE | Alu | AluSx |
CAediting_73573 | chr1_67418014_- | SINE | Alu | AluSx |
CAediting_73574 | chr1_67418036_- | SINE | Alu | AluSx |
CAediting_73575 | chr1_67418043_- | SINE | Alu | AluSx |
CAediting_73576 | chr1_67418052_- | SINE | Alu | AluSx |
CAediting_73577 | chr1_67418061_- | SINE | Alu | AluSx |
CAediting_73578 | chr1_67418068_- | SINE | Alu | AluSx |
CAediting_73579 | chr1_67418072_- | SINE | Alu | AluSx |
CAediting_73580 | chr1_67418073_- | SINE | Alu | AluSx |
CAediting_73581 | chr1_67418078_- | SINE | Alu | AluSx |
CAediting_73582 | chr1_67418104_- | SINE | Alu | AluSx |
CAediting_73583 | chr1_67418108_- | SINE | Alu | AluSx |
CAediting_73584 | chr1_67418113_- | SINE | Alu | AluSx |
CAediting_73585 | chr1_67418114_- | SINE | Alu | AluSx |
CAediting_73586 | chr1_67418140_- | SINE | Alu | AluSx |
CAediting_73587 | chr1_67418143_- | SINE | Alu | AluSx |
CAediting_73588 | chr1_67418145_- | SINE | Alu | AluSx |
CAediting_73589 | chr1_67418152_- | SINE | Alu | AluSx |
CAediting_73590 | chr1_67418153_- | SINE | Alu | AluSx |
CAediting_73591 | chr1_67418154_- | SINE | Alu | AluSx |
CAediting_73592 | chr1_67418168_- | SINE | Alu | AluSx |
CAediting_73593 | chr1_67418169_- | SINE | Alu | AluSx |
CAediting_73594 | chr1_67418172_- | SINE | Alu | AluSx |
CAediting_73595 | chr1_67418176_- | SINE | Alu | AluSx |
CAediting_73596 | chr1_67418178_- | SINE | Alu | AluSx |
CAediting_73597 | chr1_67418182_- | SINE | Alu | AluSx |
CAediting_73598 | chr1_67418194_- | SINE | Alu | AluSx |
CAediting_73599 | chr1_67418207_- | SINE | Alu | AluSx |
CAediting_73600 | chr1_67418229_- | SINE | Alu | AluSx |
CAediting_73601 | chr1_67418231_- | SINE | Alu | AluSx |
CAediting_73602 | chr1_67418248_- | SINE | Alu | AluSx |
CAediting_73603 | chr1_67418271_- | SINE | Alu | AluSx |
CAediting_73604 | chr1_67418485_- | SINE | Alu | AluSz6 |
CAediting_73605 | chr1_67418555_- | SINE | Alu | AluSz6 |
CAediting_73606 | chr1_67418556_- | SINE | Alu | AluSz6 |
CAediting_73607 | chr1_67418567_- | SINE | Alu | AluSz6 |
CAediting_73608 | chr1_67418586_- | SINE | Alu | AluSz6 |
CAediting_73609 | chr1_67418591_- | SINE | Alu | AluSz6 |
CAediting_73610 | chr1_67418593_- | SINE | Alu | AluSz6 |
CAediting_73611 | chr1_67418596_- | SINE | Alu | AluSz6 |
CAediting_73612 | chr1_67418611_- | SINE | Alu | AluSz6 |
CAediting_73613 | chr1_67418637_- | SINE | Alu | AluSz6 |
CAediting_73614 | chr1_67418659_- | SINE | Alu | AluSz6 |
CAediting_73615 | chr1_67418675_- | SINE | Alu | AluSz6 |
CAediting_73616 | chr1_67418712_- | SINE | Alu | AluSz6 |
CAediting_73617 | chr1_67418715_- | SINE | Alu | AluSz6 |
CAediting_73618 | chr1_67418725_- | SINE | Alu | AluSz6 |
CAediting_73619 | chr1_67422302_- | SINE | Alu | AluSp |
CAediting_73620 | chr1_67422383_- | SINE | Alu | AluSp |
CAediting_73621 | chr1_67422387_- | SINE | Alu | AluSp |
CAediting_73622 | chr1_67422680_- | SINE | Alu | AluSx |
CAediting_73623 | chr1_67422848_- | SINE | Alu | AluSx |
Top |
RNA A-to-I editing events in the alternative splicing sites for SERBP1 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SERBP1 |
![]() * The grey color means N/A. |
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![]() * Click on the image to enlarge it in a new window. |
Top |
Protein coding region RNA A-to-I editings for SERBP1 |
![]() * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SERBP1 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_73459 | chr1_67409014_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4638-5p | 67409011 | 67409018 | 8mer-1a | 67409011 | 67409030 | 146.00 | -20.28 |
CAediting_73460 | chr1_67409018_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-324-3p | 67409018 | 67409024 | 7mer-m8 | 67409017 | 67409043 | 146.00 | -31.42 |
CAediting_73463 | chr1_67409042_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4437 | 67409039 | 67409045 | 7mer-m8 | 67409038 | 67409058 | 146.00 | -20.13 |
CAediting_73474 | chr1_67409171_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1301-3p | 67409166 | 67409171 | 6mer | 67409165 | 67409188 | 140.00 | -26.00 |
CAediting_73474 | chr1_67409171_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4670-5p | 67409169 | 67409175 | 7mer-m8 | 67409168 | 67409193 | 154.00 | -18.32 |
CAediting_73475 | chr1_67409176_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4740-3p | 67409174 | 67409180 | 7mer-m8 | 67409173 | 67409192 | 149.00 | -24.22 |
CAediting_73477 | chr1_67409202_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-3940-3p | 67409198 | 67409204 | 7mer-m8 | 67409197 | 67409219 | 154.00 | -25.07 |
CAediting_73458 | chr1_67409011_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-212-5p | 67409011 | 67409017 | 7mer-m8 | 67409010 | 67409029 | 158.00 | -26.28 |
CAediting_73458 | chr1_67409011_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6813-3p | 67409010 | 67409016 | 7mer-m8 | 67409009 | 67409032 | 153.00 | -25.22 |
CAediting_73462 | chr1_67409035_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-5587-3p | 67409035 | 67409041 | 7mer-m8 | 67409034 | 67409055 | 154.00 | -24.72 |
CAediting_73462 | chr1_67409035_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6840-5p | 67409034 | 67409040 | 7mer-m8 | 67409033 | 67409058 | 147.00 | -25.62 |
CAediting_73466 | chr1_67409052_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-362-5p | 67409050 | 67409056 | 7mer-m8 | 67409049 | 67409072 | 145.00 | -20.84 |
CAediting_73466 | chr1_67409052_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-500b-5p | 67409050 | 67409056 | 7mer-m8 | 67409049 | 67409066 | 140.00 | -12.26 |
CAediting_73467 | chr1_67409077_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1468-3p | 67409075 | 67409082 | 8mer-1a | 67409075 | 67409096 | 152.00 | -11.79 |
CAediting_73467 | chr1_67409077_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aw | 67409075 | 67409081 | 7mer-m8 | 67409074 | 67409093 | 142.00 | -6.64 |
CAediting_73470 | chr1_67409145_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4539 | 67409145 | 67409150 | 6mer | 67409144 | 67409163 | 145.00 | -21.50 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-25-5p | 67409157 | 67409163 | 7mer-m8 | 67409156 | 67409176 | 147.00 | -20.74 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-658 | 67409158 | 67409164 | 7mer-m8 | 67409157 | 67409182 | 149.00 | -28.56 |
CAediting_73478 | chr1_67409206_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1285-3p | 67409201 | 67409206 | 6mer | 67409200 | 67409221 | 148.00 | -26.78 |
CAediting_73478 | chr1_67409206_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1285-3p | 67409201 | 67409206 | 6mer | 67409200 | 67409221 | 148.00 | -26.78 |
CAediting_73478 | chr1_67409206_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4486 | 67409201 | 67409207 | 7mer-m8 | 67409200 | 67409219 | 146.00 | -22.51 |
CAediting_73480 | chr1_67409222_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-3977 | 67409220 | 67409226 | 7mer-m8 | 67409219 | 67409242 | 160.00 | -13.49 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-320a-3p | 67411102 | 67411107 | 6mer | 67411101 | 67411122 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-320b | 67411102 | 67411107 | 6mer | 67411101 | 67411122 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-320b | 67411102 | 67411107 | 6mer | 67411101 | 67411122 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-320c | 67411102 | 67411107 | 6mer | 67411101 | 67411120 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-320c | 67411102 | 67411107 | 6mer | 67411101 | 67411120 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-320d | 67411102 | 67411107 | 6mer | 67411101 | 67411119 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-320d | 67411102 | 67411107 | 6mer | 67411101 | 67411119 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4429 | 67411102 | 67411107 | 6mer | 67411101 | 67411120 | 145.00 | -15.27 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-320a-3p | 67411102 | 67411107 | 6mer | 67411101 | 67411122 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-320b | 67411102 | 67411107 | 6mer | 67411101 | 67411122 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-320b | 67411102 | 67411107 | 6mer | 67411101 | 67411122 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-320c | 67411102 | 67411107 | 6mer | 67411101 | 67411120 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-320c | 67411102 | 67411107 | 6mer | 67411101 | 67411120 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-320d | 67411102 | 67411107 | 6mer | 67411101 | 67411119 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-320d | 67411102 | 67411107 | 6mer | 67411101 | 67411119 | 153.00 | -19.65 |
CAediting_73482 | chr1_67411106_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-4429 | 67411102 | 67411107 | 6mer | 67411101 | 67411120 | 145.00 | -15.27 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_73473 | chr1_67409166_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1184 | 67409165 | 67409170 | 6mer | 67409164 | 67409186 | 141 | -22 |
CAediting_73473 | chr1_67409166_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1184 | 67409165 | 67409170 | 6mer | 67409164 | 67409186 | 141 | -22 |
CAediting_73473 | chr1_67409166_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1184 | 67409165 | 67409170 | 6mer | 67409164 | 67409186 | 141 | -22 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-12114 | 67409156 | 67409162 | 7mer-m8 | 67409155 | 67409172 | 155 | -22.4 |
CAediting_73477 | chr1_67409202_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1262 | 67409202 | 67409208 | 7mer-m8 | 67409201 | 67409222 | 140 | -17.58 |
CAediting_73478 | chr1_67409206_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1262 | 67409202 | 67409208 | 7mer-m8 | 67409201 | 67409222 | 140 | -17.58 |
CAediting_73462 | chr1_67409035_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1306-5p | 67409031 | 67409037 | 7mer-m8 | 67409030 | 67409051 | 147 | -21.98 |
CAediting_73473 | chr1_67409166_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-17-3p | 67409165 | 67409171 | 7mer-m8 | 67409164 | 67409185 | 150 | -18.74 |
CAediting_73469 | chr1_67409142_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-219b-3p | 67409138 | 67409144 | 7mer-m8 | 67409137 | 67409157 | 153 | -15.53 |
CAediting_73469 | chr1_67409142_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-302f | 67409139 | 67409145 | 7mer-m8 | 67409138 | 67409154 | 145 | -8.09 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-3689d | 67409154 | 67409160 | 7mer-m8 | 67409153 | 67409175 | 143 | -18.85 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-3689d | 67409154 | 67409160 | 7mer-m8 | 67409153 | 67409175 | 143 | -18.85 |
CAediting_73475 | chr1_67409176_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4324 | 67409174 | 67409180 | 7mer-m8 | 67409173 | 67409192 | 146 | -12.25 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4443 | 67409159 | 67409165 | 7mer-m8 | 67409158 | 67409175 | 143 | -15.73 |
CAediting_73479 | chr1_67409220_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4494 | 67409215 | 67409221 | 7mer-m8 | 67409214 | 67409235 | 147 | -21.54 |
CAediting_73480 | chr1_67409222_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-452-5p | 67409218 | 67409224 | 7mer-m8 | 67409217 | 67409237 | 163 | -16.36 |
CAediting_73479 | chr1_67409220_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4676-3p | 67409218 | 67409224 | 7mer-m8 | 67409217 | 67409241 | 151 | -17.04 |
CAediting_73480 | chr1_67409222_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4676-3p | 67409218 | 67409224 | 7mer-m8 | 67409217 | 67409241 | 151 | -17.04 |
CAediting_73477 | chr1_67409202_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4701-3p | 67409202 | 67409208 | 7mer-m8 | 67409201 | 67409220 | 149 | -18.27 |
CAediting_73478 | chr1_67409206_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4701-3p | 67409202 | 67409208 | 7mer-m8 | 67409201 | 67409220 | 149 | -18.27 |
CAediting_73461 | chr1_67409022_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4772-3p | 67409021 | 67409027 | 7mer-m8 | 67409020 | 67409042 | 150 | -17.58 |
CAediting_73476 | chr1_67409195_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-508-5p | 67409193 | 67409199 | 7mer-m8 | 67409192 | 67409214 | 150 | -20.08 |
CAediting_73478 | chr1_67409206_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-542-3p | 67409205 | 67409211 | 7mer-m8 | 67409204 | 67409224 | 153 | -16.7 |
CAediting_73475 | chr1_67409176_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-544b | 67409174 | 67409179 | 6mer | 67409173 | 67409195 | 150 | -21.69 |
CAediting_73483 | chr1_67412008_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-633 | 67412008 | 67412013 | 6mer | 67412007 | 67412029 | 145 | -8.25 |
CAediting_73476 | chr1_67409195_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6512-3p | 67409195 | 67409201 | 7mer-m8 | 67409194 | 67409215 | 142 | -19.67 |
CAediting_73477 | chr1_67409202_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-661 | 67409199 | 67409205 | 7mer-m8 | 67409198 | 67409221 | 154 | -24.03 |
CAediting_73476 | chr1_67409195_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6720-5p | 67409195 | 67409201 | 7mer-m8 | 67409194 | 67409218 | 155 | -27.44 |
CAediting_73477 | chr1_67409202_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6736-5p | 67409202 | 67409208 | 7mer-m8 | 67409201 | 67409225 | 147 | -25.77 |
CAediting_73478 | chr1_67409206_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6736-5p | 67409202 | 67409208 | 7mer-m8 | 67409201 | 67409225 | 147 | -25.77 |
CAediting_73477 | chr1_67409202_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6742-3p | 67409200 | 67409206 | 7mer-m8 | 67409199 | 67409218 | 140 | -17.55 |
CAediting_73477 | chr1_67409202_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6776-5p | 67409201 | 67409207 | 7mer-m8 | 67409200 | 67409219 | 148 | -20.27 |
CAediting_73478 | chr1_67409206_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6776-5p | 67409201 | 67409207 | 7mer-m8 | 67409200 | 67409219 | 148 | -20.27 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6851-5p | 67409154 | 67409160 | 7mer-m8 | 67409153 | 67409178 | 150 | -24.97 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6880-5p | 67409157 | 67409163 | 7mer-m8 | 67409156 | 67409177 | 148 | -23.56 |
CAediting_73473 | chr1_67409166_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6884-5p | 67409161 | 67409167 | 7mer-m8 | 67409160 | 67409183 | 146 | -22.15 |
CAediting_73476 | chr1_67409195_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-766-3p | 67409194 | 67409200 | 7mer-m8 | 67409193 | 67409214 | 145 | -20.72 |
CAediting_73472 | chr1_67409159_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-7847-3p | 67409158 | 67409164 | 7mer-m8 | 67409157 | 67409177 | 145 | -18.48 |
CAediting_73468 | chr1_67409112_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-7977 | 67409112 | 67409118 | 7mer-m8 | 67409111 | 67409127 | 145 | -13.47 |
CAediting_73465 | chr1_67409051_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-8062 | 67409046 | 67409052 | 7mer-m8 | 67409045 | 67409065 | 147 | -10.78 |
CAediting_73479 | chr1_67409220_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-892c-3p | 67409218 | 67409224 | 7mer-m8 | 67409217 | 67409238 | 145 | -9 |
CAediting_73480 | chr1_67409222_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-892c-3p | 67409218 | 67409224 | 7mer-m8 | 67409217 | 67409238 | 145 | -9 |
CAediting_73483 | chr1_67412008_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-633 | 67412008 | 67412013 | 6mer | 67412007 | 67412029 | 145 | -8.25 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_846604 | chr11_93733708_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1304-3p | 67409935 | 67409942 | 8mer-1a | 67409935 | 67409956 | 142 | -15.74 |
CAediting_688081 | chr9_63819627_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4477b | 67410693 | 67410700 | 8mer-1a | 67410693 | 67410714 | 149 | -12.07 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67410989 | 67410995 | 7mer-m8 | 67410988 | 67411013 | 148 | -12.63 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67410550 | 67410556 | 7mer-m8 | 67410549 | 67410579 | 150 | -13.65 |
CAediting_77128 | chr1_85133844_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4423-3p | 67408368 | 67408373 | 6mer | 67408367 | 67408386 | 141 | -19.06 |
CAediting_1399425 | chr20_1392958_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6869-5p | 67411459 | 67411465 | 7mer-m8 | 67411458 | 67411478 | 143 | -17.12 |
CAediting_1399425 | chr20_1392958_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6869-5p | 67408926 | 67408933 | 8mer-1a | 67408926 | 67408947 | 140 | -16.02 |
CAediting_580943 | chr7_100356700_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6840-3p | 67409150 | 67409156 | 7mer-m8 | 67409149 | 67409170 | 143 | -27.34 |
CAediting_573000 | chr7_92204081_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-1285-5p | 67409934 | 67409940 | 7mer-m8 | 67409933 | 67409953 | 145 | -16.65 |
CAediting_1399425 | chr20_1392958_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-6869-5p | 67411459 | 67411465 | 7mer-m8 | 67411458 | 67411478 | 143 | -17.12 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_86358 | chr1_109598906_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-197-5p | 67408927 | 67408934 | 8mer-1a | 67408927 | 67408949 | 140 | -13.04 |
CAediting_604450 | chr7_133034877_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-3654 | 67411737 | 67411743 | 7mer-m8 | 67411736 | 67411754 | 145 | -13.67 |
CAediting_688081 | chr9_63819627_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4477b | 67408162 | 67408169 | 8mer-1a | 67408162 | 67408183 | 140 | -6.84 |
CAediting_414656 | chr5_72878640_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4804-3p | 67410754 | 67410761 | 8mer-1a | 67410754 | 67410774 | 147 | -11.19 |
CAediting_414656 | chr5_72878640_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-4804-3p | 67410515 | 67410522 | 8mer-1a | 67410515 | 67410538 | 146 | -17.04 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67410245 | 67410251 | 7mer-m8 | 67410244 | 67410266 | 146 | -15.65 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67410245 | 67410251 | 7mer-m8 | 67410244 | 67410266 | 146 | -15.65 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67409360 | 67409366 | 7mer-m8 | 67409359 | 67409384 | 154 | -12.1 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67409360 | 67409366 | 7mer-m8 | 67409359 | 67409384 | 154 | -12.1 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67412797 | 67412804 | 8mer-1a | 67412797 | 67412822 | 144 | -5.99 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67412797 | 67412804 | 8mer-1a | 67412797 | 67412822 | 144 | -5.99 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67412775 | 67412782 | 8mer-1a | 67412775 | 67412799 | 144 | -7.95 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-548aa | 67412775 | 67412782 | 8mer-1a | 67412775 | 67412799 | 144 | -7.95 |
CAediting_117844 | chr1_162342605_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-556-3p | 67411082 | 67411089 | 8mer-1a | 67411082 | 67411104 | 144 | -9.46 |
CAediting_228905 | chr2_188297554_+ | ENSG00000142864.13 | ENST00000370994 | hsa-miR-561-3p | 67411656 | 67411662 | 7mer-m8 | 67411655 | 67411676 | 140 | -8.31 |
CAediting_524911 | chr7_5495852_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-589-3p | 67411513 | 67411519 | 7mer-m8 | 67411512 | 67411535 | 146 | -16.37 |
CAediting_524911 | chr7_5495852_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-589-3p | 67412279 | 67412285 | 7mer-m8 | 67412278 | 67412301 | 140 | -8.76 |
CAediting_980496 | chr14_31014685_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-624-3p | 67408179 | 67408185 | 7mer-m8 | 67408178 | 67408198 | 149 | -15.42 |
CAediting_1399425 | chr20_1392958_- | ENSG00000142864.13 | ENST00000370994 | hsa-miR-6869-5p | 67411282 | 67411289 | 8mer-1a | 67411282 | 67411303 | 147 | -15.32 |
CAediting_604450 | chr7_133034877_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-3654 | 67411737 | 67411743 | 7mer-m8 | 67411736 | 67411754 | 145 | -13.67 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000142864.13 | ENST00000370995 | hsa-miR-548aa | 67412797 | 67412804 | 8mer-1a | 67412797 | 67412822 | 144 | -5.99 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000142864.13 | ENST00000370995 | hsa-miR-548aa | 67412775 | 67412782 | 8mer-1a | 67412775 | 67412799 | 144 | -7.95 |
CAediting_117844 | chr1_162342605_+ | ENSG00000142864.13 | ENST00000370995 | hsa-miR-556-3p | 67411082 | 67411089 | 8mer-1a | 67411082 | 67411104 | 144 | -9.46 |
CAediting_228905 | chr2_188297554_+ | ENSG00000142864.13 | ENST00000370995 | hsa-miR-561-3p | 67411656 | 67411662 | 7mer-m8 | 67411655 | 67411676 | 140 | -8.31 |
CAediting_1399425 | chr20_1392958_- | ENSG00000142864.13 | ENST00000370995 | hsa-miR-6869-5p | 67411282 | 67411289 | 8mer-1a | 67411282 | 67411303 | 147 | -15.32 |
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The effects of the RNA editing to the stability of the RNA structures for SERBP1 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000370994.7 | protein_coding | ![]() | ![]() |
ENST00000370995.5 | protein_coding | ![]() | ![]() |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_73457 | ENST00000370994.7 | chr1_67409008_- | -1894.60 | -1895.00 | -1906.30 |
CAediting_73458 | ENST00000370994.7 | chr1_67409011_- | -1894.40 | -1895.00 | -1906.30 |
CAediting_73459 | ENST00000370994.7 | chr1_67409014_- | -1898.40 | -1895.00 | -1906.30 |
CAediting_73460 | ENST00000370994.7 | chr1_67409018_- | -1894.10 | -1895.00 | -1906.30 |
CAediting_73461 | ENST00000370994.7 | chr1_67409022_- | -1894.30 | -1895.00 | -1906.30 |
CAediting_73462 | ENST00000370994.7 | chr1_67409035_- | -1894.10 | -1895.00 | -1906.30 |
CAediting_73463 | ENST00000370994.7 | chr1_67409042_- | -1895.00 | -1895.00 | -1906.30 |
CAediting_73464 | ENST00000370994.7 | chr1_67409043_- | -1894.50 | -1895.00 | -1906.30 |
CAediting_73465 | ENST00000370994.7 | chr1_67409051_- | -1895.00 | -1895.00 | -1906.30 |
CAediting_73466 | ENST00000370994.7 | chr1_67409052_- | -1894.50 | -1895.00 | -1906.30 |
CAediting_73467 | ENST00000370994.7 | chr1_67409077_- | -1896.30 | -1895.00 | -1906.30 |
CAediting_73468 | ENST00000370994.7 | chr1_67409112_- | -1897.00 | -1895.00 | -1906.30 |
CAediting_73469 | ENST00000370994.7 | chr1_67409142_- | -1899.20 | -1895.00 | -1906.30 |
CAediting_73470 | ENST00000370994.7 | chr1_67409145_- | -1894.70 | -1895.00 | -1906.30 |
CAediting_73471 | ENST00000370994.7 | chr1_67409146_- | -1894.70 | -1895.00 | -1906.30 |
CAediting_73472 | ENST00000370994.7 | chr1_67409159_- | -1894.60 | -1895.00 | -1906.30 |
CAediting_73473 | ENST00000370994.7 | chr1_67409166_- | -1894.20 | -1895.00 | -1906.30 |
CAediting_73474 | ENST00000370994.7 | chr1_67409171_- | -1894.60 | -1895.00 | -1906.30 |
CAediting_73475 | ENST00000370994.7 | chr1_67409176_- | -1898.60 | -1895.00 | -1906.30 |
CAediting_73476 | ENST00000370994.7 | chr1_67409195_- | -1894.10 | -1895.00 | -1906.30 |
CAediting_73477 | ENST00000370994.7 | chr1_67409202_- | -1894.30 | -1895.00 | -1906.30 |
CAediting_73478 | ENST00000370994.7 | chr1_67409206_- | -1894.60 | -1895.00 | -1906.30 |
CAediting_73479 | ENST00000370994.7 | chr1_67409220_- | -1894.20 | -1895.00 | -1906.30 |
CAediting_73480 | ENST00000370994.7 | chr1_67409222_- | -1895.00 | -1895.00 | -1906.30 |
CAediting_73481 | ENST00000370994.7 | chr1_67409224_- | -1894.50 | -1895.00 | -1906.30 |
CAediting_73482 | ENST00000370994.7 | chr1_67411106_- | -1896.60 | -1895.00 | -1906.30 |
CAediting_73483 | ENST00000370994.7 | chr1_67412008_- | -1895.00 | -1895.00 | -1906.30 |
CAediting_73484 | ENST00000370994.7 | chr1_67412054_- | -1897.00 | -1895.00 | -1906.30 |
CAediting_73482 | ENST00000370995.5 | chr1_67411106_- | -972.30 | -968.70 | -974.30 |
CAediting_73483 | ENST00000370995.5 | chr1_67412008_- | -968.70 | -968.70 | -974.30 |
CAediting_73484 | ENST00000370995.5 | chr1_67412054_- | -970.70 | -968.70 | -974.30 |
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Relation with ADAR for SERBP1 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BRCA | CAediting_73457 | chr1_67409008_- | 0.000892875466746952 | 0.226015501029432 | . | . | . | . |
LIHC | CAediting_73457 | chr1_67409008_- | 0.0273814811580897 | 0.181366221527217 | . | . | . | . |
LUAD | CAediting_73457 | chr1_67409008_- | 0.00658970813558034 | 0.284421547281425 | . | . | . | . |
BLCA | CAediting_73459 | chr1_67409014_- | 1.00960723722528e-21 | 0.475644321066716 | . | . | . | . |
LGG | CAediting_73459 | chr1_67409014_- | 5.97881962467781e-13 | 0.34060722197203 | . | . | . | . |
BRCA | CAediting_73459 | chr1_67409014_- | 2.01043246365679e-72 | 0.51596059995225 | . | . | . | . |
LIHC | CAediting_73459 | chr1_67409014_- | 5.26003686794888e-07 | 0.294950843993146 | . | . | . | . |
CESC | CAediting_73459 | chr1_67409014_- | 1.82707882753122e-15 | 0.445748407096006 | . | . | . | . |
LUAD | CAediting_73459 | chr1_67409014_- | 2.53244043281662e-19 | 0.40069808956418 | . | . | . | . |
COAD | CAediting_73459 | chr1_67409014_- | 6.28047599401596e-15 | 0.38714349386127 | . | . | . | . |
LUSC | CAediting_73459 | chr1_67409014_- | 6.53381228900915e-22 | 0.431387670766091 | . | . | . | . |
GBM | CAediting_73459 | chr1_67409014_- | 6.12357224767807e-09 | 0.455250613274132 | . | . | . | . |
PRAD | CAediting_73459 | chr1_67409014_- | 3.5992270543806e-17 | 0.377579917183264 | . | . | . | . |
HNSC | CAediting_73459 | chr1_67409014_- | 7.00476798828228e-14 | 0.338571961767952 | . | . | . | . |
STAD | CAediting_73459 | chr1_67409014_- | 2.54214576400373e-10 | 0.344040582501601 | . | . | . | . |
THCA | CAediting_73459 | chr1_67409014_- | 4.33026318709573e-21 | 0.404718454453624 | . | . | . | . |
KIRC | CAediting_73459 | chr1_67409014_- | 8.96163888538595e-06 | 0.196176654295576 | . | . | . | . |
UCEC | CAediting_73459 | chr1_67409014_- | 1.37376542342576e-20 | 0.424500545018907 | 0.000220734394444927 | 0.175635189073498 | . | . |
ACC | CAediting_73459 | chr1_67409014_- | 1.55597804189566e-07 | 0.634021739275023 | . | . | . | . |
ESCA | CAediting_73459 | chr1_67409014_- | 1.66422815307234e-07 | 0.398352763845681 | . | . | . | . |
OV | CAediting_73459 | chr1_67409014_- | 6.55419105917113e-15 | 0.404703847246777 | . | . | . | . |
PAAD | CAediting_73459 | chr1_67409014_- | 1.88266766172816e-09 | 0.445046674836626 | . | . | . | . |
PCPG | CAediting_73459 | chr1_67409014_- | 0.012197640450554 | 0.260344376849231 | . | . | . | . |
SKCM | CAediting_73459 | chr1_67409014_- | 5.77581507765025e-24 | 0.485863125342886 | . | . | . | . |
UCS | CAediting_73459 | chr1_67409014_- | 0.000238067380234445 | 0.492917863625811 | . | . | . | . |
UVM | CAediting_73459 | chr1_67409014_- | 0.00809265150698197 | 0.366885657327538 | . | . | . | . |
MESO | CAediting_73459 | chr1_67409014_- | 0.000105676496813981 | 0.412700539229718 | . | . | . | . |
READ | CAediting_73459 | chr1_67409014_- | 5.66478014743193e-08 | 0.459120513940111 | . | . | . | . |
SARC | CAediting_73459 | chr1_67409014_- | 1.7578484853103e-17 | 0.526010603697252 | . | . | . | . |
TGCT | CAediting_73459 | chr1_67409014_- | 5.93743420303861e-13 | 0.57265540089034 | . | . | . | . |
THYM | CAediting_73459 | chr1_67409014_- | 1.58216398542614e-08 | 0.5174654558831 | 0.0201937110491694 | 0.226433091251713 | 4.74101575513341e-05 | 0.386112677731795 |
BRCA | CAediting_73461 | chr1_67409022_- | 0.000208638448697398 | 0.277582769476343 | . | . | . | . |
LIHC | CAediting_73461 | chr1_67409022_- | 0.000727155262157739 | 0.332428612359291 | . | . | . | . |
BRCA | CAediting_73463 | chr1_67409042_- | 0.00128886661614511 | 0.216631863416942 | . | . | . | . |
LIHC | CAediting_73463 | chr1_67409042_- | 0.0045916912554256 | 0.238224576141841 | . | . | . | . |
LUAD | CAediting_73463 | chr1_67409042_- | 0.0272983711862793 | 0.262005507231999 | . | . | . | . |
STAD | CAediting_73463 | chr1_67409042_- | 0.0451396825590759 | 0.266435285148412 | . | . | . | . |
STAD | CAediting_73469 | chr1_67409142_- | . | . | . | . | 0.000535341104321821 | 0.359733552677657 |
BLCA | CAediting_73473 | chr1_67409166_- | 4.19286687233819e-06 | 0.330974395805482 | . | . | . | . |
LGG | CAediting_73473 | chr1_67409166_- | . | . | 0.0165923825024148 | 0.22596359015162 | . | . |
BRCA | CAediting_73473 | chr1_67409166_- | 4.98294481321354e-38 | 0.44892135311781 | . | . | . | . |
LIHC | CAediting_73473 | chr1_67409166_- | 0.00176549420267073 | 0.227802257697977 | . | . | . | . |
CESC | CAediting_73473 | chr1_67409166_- | 1.22054621495971e-07 | 0.367850011689879 | . | . | . | . |
LUAD | CAediting_73473 | chr1_67409166_- | 4.81708437643493e-13 | 0.42204106158003 | . | . | . | . |
COAD | CAediting_73473 | chr1_67409166_- | 0.0425359916056735 | 0.166400816313043 | . | . | . | . |
LUSC | CAediting_73473 | chr1_67409166_- | 3.80641072820523e-08 | 0.349255902603308 | . | . | . | . |
GBM | CAediting_73473 | chr1_67409166_- | 0.0165880088265207 | 0.256249569972359 | . | . | . | . |
PRAD | CAediting_73473 | chr1_67409166_- | 2.72636572839526e-07 | 0.400128082750909 | . | . | . | . |
HNSC | CAediting_73473 | chr1_67409166_- | 7.35424921377194e-05 | 0.238447056780763 | . | . | . | . |
STAD | CAediting_73473 | chr1_67409166_- | 6.05939055341166e-05 | 0.252319957837598 | . | . | . | . |
THCA | CAediting_73473 | chr1_67409166_- | 8.29312259236573e-07 | 0.286540273978662 | . | . | . | . |
KIRC | CAediting_73473 | chr1_67409166_- | 0.00074726683852608 | 0.179652807759309 | . | . | . | . |
UCEC | CAediting_73473 | chr1_67409166_- | 0.0170189185995933 | 0.157567003491788 | . | . | . | . |
ESCA | CAediting_73473 | chr1_67409166_- | 0.000711249531936749 | 0.289939924259232 | . | . | . | . |
OV | CAediting_73473 | chr1_67409166_- | 3.94966349283104e-06 | 0.268966082950924 | . | . | . | . |
PAAD | CAediting_73473 | chr1_67409166_- | 0.0234110081691158 | 0.259827018259247 | . | . | . | . |
SKCM | CAediting_73473 | chr1_67409166_- | 0.00383757871277261 | 0.215668844449563 | . | . | . | . |
MESO | CAediting_73473 | chr1_67409166_- | 0.00154903736901631 | 0.424177044759556 | . | . | . | . |
SARC | CAediting_73473 | chr1_67409166_- | 0.00144708942579609 | 0.346109103334583 | . | . | . | . |
TGCT | CAediting_73473 | chr1_67409166_- | 2.66919817134453e-06 | 0.506022872664084 | . | . | . | . |
THYM | CAediting_73473 | chr1_67409166_- | 0.0014416652601384 | 0.434534085534963 | . | . | . | . |
BLCA | CAediting_73475 | chr1_67409176_- | 2.36443989960745e-13 | 0.436827308183786 | . | . | . | . |
LGG | CAediting_73475 | chr1_67409176_- | 1.14383652250979e-06 | 0.300267535669582 | 0.00277729668533991 | 0.18732577652364 | 0.0226421496022033 | 0.143275226732276 |
BRCA | CAediting_73475 | chr1_67409176_- | 2.58455104924994e-75 | 0.54317748719449 | . | . | . | . |
LIHC | CAediting_73475 | chr1_67409176_- | 1.34204258252069e-07 | 0.38582454833699 | . | . | . | . |
CESC | CAediting_73475 | chr1_67409176_- | 3.65264789756515e-10 | 0.376855052087161 | . | . | . | . |
LUAD | CAediting_73475 | chr1_67409176_- | 2.27106348471631e-14 | 0.385378164569641 | . | . | . | . |
COAD | CAediting_73475 | chr1_67409176_- | 7.08624381725308e-05 | 0.228843757742727 | . | . | . | . |
LUSC | CAediting_73475 | chr1_67409176_- | 2.09563078860325e-18 | 0.443627559765347 | . | . | 0.0284794335147709 | 0.116775964372837 |
GBM | CAediting_73475 | chr1_67409176_- | 2.2739660914852e-08 | 0.431684497777345 | . | . | . | . |
PRAD | CAediting_73475 | chr1_67409176_- | 2.54469464535117e-10 | 0.349764474900304 | . | . | . | . |
HNSC | CAediting_73475 | chr1_67409176_- | 7.40948703707377e-12 | 0.342283590592685 | . | . | . | . |
STAD | CAediting_73475 | chr1_67409176_- | 3.47818695155222e-11 | 0.35617709597178 | . | . | . | . |
THCA | CAediting_73475 | chr1_67409176_- | 3.38641500523686e-14 | 0.344005348911749 | . | . | . | . |
KIRC | CAediting_73475 | chr1_67409176_- | 4.98080696759255e-06 | 0.213568185453954 | . | . | . | . |
UCEC | CAediting_73475 | chr1_67409176_- | 4.70122057945032e-10 | 0.32197104814412 | . | . | . | . |
ESCA | CAediting_73475 | chr1_67409176_- | 3.27307425279657e-06 | 0.358361474045238 | . | . | . | . |
OV | CAediting_73475 | chr1_67409176_- | 1.72083201269342e-13 | 0.381868157534072 | . | . | . | . |
PAAD | CAediting_73475 | chr1_67409176_- | 0.000285611533388786 | 0.32294302642116 | . | . | . | . |
SKCM | CAediting_73475 | chr1_67409176_- | 2.65792897675135e-20 | 0.500545030855391 | . | . | . | . |
MESO | CAediting_73475 | chr1_67409176_- | 0.000631252354001561 | 0.425418417579652 | . | . | . | . |
READ | CAediting_73475 | chr1_67409176_- | 0.0357113230996193 | 0.23231141532915 | . | . | . | . |
SARC | CAediting_73475 | chr1_67409176_- | 7.39489954738114e-06 | 0.357952723671331 | . | . | . | . |
TGCT | CAediting_73475 | chr1_67409176_- | 6.17688580790775e-06 | 0.404256712653724 | . | . | . | . |
THYM | CAediting_73475 | chr1_67409176_- | 3.18671932556144e-06 | 0.511595444696412 | . | . | 0.00509552542025953 | 0.322349682004286 |
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Relation with cancer stages for SERBP1 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BLCA | pathologic_stage | CAediting_73459 | chr1_67409014_- | 0.0207891557716741 | 0.122151315388065 |
BRCA | pathologic_stage | CAediting_73465 | chr1_67409051_- | 0.0259005287294874 | 0.297620183033905 |
CESC | clinical_stage | CAediting_73475 | chr1_67409176_- | 0.00631632725259048 | -0.170931606505267 |
ESCA | pathologic_stage | CAediting_73562 | chr1_67417613_- | 0.0211956684063127 | 0.24539809095899 |
HNSC | pathologic_stage | CAediting_73459 | chr1_67409014_- | 0.045473074342096 | 0.0994541663595869 |
KIRC | pathologic_stage | CAediting_73459 | chr1_67409014_- | 0.00281821576500426 | 0.132918606592878 |
KIRC | pathologic_stage | CAediting_73463 | chr1_67409042_- | 0.035503607968146 | 0.284163683933048 |
KIRC | pathologic_stage | CAediting_73473 | chr1_67409166_- | 0.00379854706128539 | 0.15477824403811 |
KIRC | pathologic_stage | CAediting_73475 | chr1_67409176_- | 0.00196422495438747 | 0.146039509625879 |
LIHC | pathologic_stage | CAediting_73473 | chr1_67409166_- | 0.0402194696262288 | -0.15752044271619 |
LUSC | pathologic_stage | CAediting_73459 | chr1_67409014_- | 0.00105777800765613 | 0.154218885243439 |
THCA | pathologic_stage | CAediting_73473 | chr1_67409166_- | 0.0169866826565002 | 0.142305135380076 |
THCA | pathologic_stage | CAediting_73475 | chr1_67409176_- | 0.0203017789660619 | 0.109013151129827 |
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Relation with survival for SERBP1 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
BRCA | CAediting_73473 | chr1_67409166_- | 0.0129233366985559 | 0.015115 | 0.0803996 |
PRAD | CAediting_73459 | chr1_67409014_- | 0.0196697362919744 | 0.016448 | 6.13145e-07 |
STAD | CAediting_73463 | chr1_67409042_- | 0.00206725883372549 | 0.00888298 | 8.61719e-07 |
KIRC | CAediting_73473 | chr1_67409166_- | 0.0483313863741425 | 0.011899 | 16.9397 |
ESCA | CAediting_73562 | chr1_67417613_- | 0.00030863641615031 | 0.0442112 | 5.47215 |
OV | CAediting_73464 | chr1_67409043_- | 0.045301995250587 | 0.00196666 | 5954.42 |
OV | CAediting_73584 | chr1_67418113_- | 0.00875107751489168 | 0.00706214 | 57.8691 |
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RelatedDrugs for SERBP1 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SERBP1 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
SERBP1 | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
SERBP1 | C0038356 | Stomach Neoplasms | 1 | CTD_human |
SERBP1 | C0235874 | Disease Exacerbation | 1 | CTD_human |
SERBP1 | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |