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Editing gene: TCTN3 (CAeditome ID:26123)

Gene summary for TCTN3

Gene summary

Gene information	Gene symbol	TCTN3
	Gene ID	26123
	Gene name	tectonic family member 3
	Synonyms	C10orf61\|JBTS18\|OFD4\|TECT3
	Cytomap	10q24.1
	Type of gene	protein-coding
	Description	tectonic-3
	Modification date	20210518
	UniProtAcc	Q6NUS6
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TCTN3	GO:0043065	Tectonic-3	17464193
TCTN3	GO:0005634	Tectonic-3	17464193

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RNA A-to-I events for TCTN3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000119977.19

RNA A-to-I editing events in Cancer.

CAediting_773505(95664984, -), CAediting_773506(95664986, -), CAediting_773507(95665003, -), CAediting_773508(95665010, -), CAediting_773509(95665021, -), CAediting_773510(95665022, -), CAediting_773511(95665375, -), CAediting_773512(95665765, -), CAediting_773513(95665766, -), CAediting_773514(95665767, -), CAediting_773515(95666101, -), CAediting_773516(95670426, -), CAediting_773517(95670427, -), CAediting_773518(95670488, -), CAediting_773519(95670571, -), CAediting_773520(95670640, -), CAediting_773521(95670647, -), CAediting_773522(95670663, -), CAediting_773523(95670752, -), CAediting_773524(95670754, -), CAediting_773525(95670787, -), CAediting_773526(95670791, -), CAediting_773527(95670807, -), CAediting_773528(95670866, -), CAediting_773529(95670871, -), CAediting_773530(95670886, -), CAediting_773531(95670927, -), CAediting_773532(95670942, -), CAediting_773533(95670952, -), CAediting_773534(95671765, -), CAediting_773535(95671847, -), CAediting_773536(95672778, -), CAediting_773537(95672789, -), CAediting_773538(95672790, -), CAediting_773539(95672821, -), CAediting_773540(95672824, -), CAediting_773541(95672825, -), CAediting_773542(95672843, -), CAediting_773543(95672875, -), CAediting_773544(95672906, -), CAediting_773545(95672919, -), CAediting_773546(95672966, -), CAediting_773547(95673580, -), CAediting_773548(95673598, -), CAediting_773549(95673608, -), CAediting_773550(95673625, -), CAediting_773551(95673638, -), CAediting_773552(95673640, -), CAediting_773553(95673651, -), CAediting_773554(95673687, -), CAediting_773555(95673717, -), CAediting_773556(95673723, -), CAediting_773557(95673740, -), CAediting_773558(95673758, -), CAediting_773559(95673770, -), CAediting_773560(95673778, -), CAediting_773561(95673783, -), CAediting_773562(95673788, -), CAediting_773563(95673790, -), CAediting_773564(95673814, -), CAediting_773565(95673839, -), CAediting_773566(95673845, -), CAediting_773567(95675216, -), CAediting_773568(95675225, -), CAediting_773569(95675230, -), CAediting_773570(95675320, -), CAediting_773571(95675325, -), CAediting_773572(95675326, -), CAediting_773573(95675387, -), CAediting_773574(95676352, -), CAediting_773575(95676423, -), CAediting_773576(95676424, -), CAediting_773577(95676438, -), CAediting_773578(95676484, -), CAediting_773579(95678340, -), CAediting_773580(95678349, -), CAediting_773581(95678421, -), CAediting_773582(95678457, -), CAediting_773583(95678486, -), CAediting_773584(95678497, -), CAediting_773585(95680863, -), CAediting_773586(95680864, -), CAediting_773587(95680868, -), CAediting_773588(95680916, -), CAediting_773589(95680917, -), CAediting_773590(95680971, -), CAediting_773591(95680979, -), CAediting_773592(95681049, -), CAediting_773593(95681165, -), CAediting_773594(95681168, -), CAediting_773595(95681213, -), CAediting_773596(95681214, -), CAediting_773597(95681294, -), CAediting_773598(95681295, -), CAediting_773599(95681318, -), CAediting_773600(95681349, -), CAediting_773601(95681355, -), CAediting_773602(95681992, -), CAediting_773603(95682095, -), CAediting_773604(95682100, -), CAediting_773605(95682149, -), CAediting_773606(95682450, -), CAediting_773607(95685982, -), CAediting_773608(95688163, -), CAediting_773609(95688172, -), CAediting_773610(95688184, -), CAediting_773611(95688197, -), CAediting_773612(95688209, -), CAediting_773613(95688223, -), CAediting_773614(95688226, -), CAediting_773615(95688232, -), CAediting_773616(95688241, -), CAediting_773617(95688242, -), CAediting_773618(95688255, -), CAediting_773619(95688268, -), CAediting_773620(95688278, -), CAediting_773621(95688307, -), CAediting_773622(95688314, -), CAediting_773623(95688327, -), CAediting_773624(95688328, -), CAediting_773625(95688357, -), CAediting_773626(95688364, -), CAediting_773627(95688383, -), CAediting_773628(95688385, -), CAediting_773629(95689204, -), CAediting_773630(95689207, -), CAediting_773631(95690079, -), CAediting_773632(95690084, -), CAediting_773633(95690122, -), CAediting_773634(95690148, -), CAediting_773635(95690151, -), CAediting_773636(95690157, -), CAediting_773637(95690159, -), CAediting_773638(95690161, -), CAediting_773639(95690162, -), CAediting_773640(95690163, -), CAediting_773641(95690164, -), CAediting_773642(95690166, -), CAediting_773643(95690179, -), CAediting_773644(95690180, -), CAediting_773645(95690183, -), CAediting_773646(95690187, -), CAediting_773647(95690208, -), CAediting_773648(95690230, -), CAediting_773649(95690235, -), CAediting_773650(95690251, -), CAediting_773651(95690255, -), CAediting_773652(95691198, -), CAediting_773653(95691206, -), CAediting_773654(95691274, -), CAediting_773655(95691281, -), CAediting_773656(95691290, -), CAediting_773657(95691291, -), CAediting_773658(95691313, -), CAediting_773659(95691320, -), CAediting_773660(95691321, -), CAediting_773661(95691322, -), CAediting_773662(95691328, -), CAediting_773663(95691347, -), CAediting_773664(95691357, -), CAediting_773665(95691361, -), CAediting_773666(95691362, -), CAediting_773667(95691367, -), CAediting_773668(95691381, -), CAediting_773669(95691396, -), CAediting_773670(95691425, -), CAediting_773671(95691426, -), CAediting_773672(95692252, -), CAediting_773673(95692314, -), CAediting_773674(95692340, -), CAediting_773675(95692343, -), CAediting_773676(95692357, -), CAediting_773677(95692362, -), CAediting_773678(95692384, -), CAediting_773679(95692419, -),

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RNA editing positional annotations for TCTN3 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_773505	chr10_95664984_-	intronic
CAediting_773506	chr10_95664986_-	intronic
CAediting_773507	chr10_95665003_-	intronic
CAediting_773508	chr10_95665010_-	intronic
CAediting_773509	chr10_95665021_-	intronic
CAediting_773510	chr10_95665022_-	intronic
CAediting_773511	chr10_95665375_-	intronic
CAediting_773512	chr10_95665765_-	intronic
CAediting_773513	chr10_95665766_-	intronic
CAediting_773514	chr10_95665767_-	intronic
CAediting_773515	chr10_95666101_-	intronic
CAediting_773516	chr10_95670426_-	intronic
CAediting_773517	chr10_95670427_-	intronic
CAediting_773518	chr10_95670488_-	intronic
CAediting_773519	chr10_95670571_-	intronic
CAediting_773520	chr10_95670640_-	intronic
CAediting_773521	chr10_95670647_-	intronic
CAediting_773522	chr10_95670663_-	intronic
CAediting_773523	chr10_95670752_-	intronic
CAediting_773524	chr10_95670754_-	intronic
CAediting_773525	chr10_95670787_-	intronic
CAediting_773526	chr10_95670791_-	intronic
CAediting_773527	chr10_95670807_-	intronic
CAediting_773528	chr10_95670866_-	intronic
CAediting_773529	chr10_95670871_-	intronic
CAediting_773530	chr10_95670886_-	intronic
CAediting_773531	chr10_95670927_-	intronic
CAediting_773532	chr10_95670942_-	intronic
CAediting_773533	chr10_95670952_-	intronic
CAediting_773534	chr10_95671765_-	intronic
CAediting_773535	chr10_95671847_-	intronic
CAediting_773536	chr10_95672778_-	intronic
CAediting_773537	chr10_95672789_-	intronic
CAediting_773538	chr10_95672790_-	intronic
CAediting_773539	chr10_95672821_-	intronic
CAediting_773540	chr10_95672824_-	intronic
CAediting_773541	chr10_95672825_-	intronic
CAediting_773542	chr10_95672843_-	intronic
CAediting_773543	chr10_95672875_-	intronic
CAediting_773544	chr10_95672906_-	intronic
CAediting_773545	chr10_95672919_-	intronic
CAediting_773546	chr10_95672966_-	intronic
CAediting_773547	chr10_95673580_-	intronic
CAediting_773548	chr10_95673598_-	intronic
CAediting_773549	chr10_95673608_-	intronic
CAediting_773550	chr10_95673625_-	intronic
CAediting_773551	chr10_95673638_-	intronic
CAediting_773552	chr10_95673640_-	intronic
CAediting_773553	chr10_95673651_-	intronic
CAediting_773554	chr10_95673687_-	intronic
CAediting_773555	chr10_95673717_-	intronic
CAediting_773556	chr10_95673723_-	intronic
CAediting_773557	chr10_95673740_-	intronic
CAediting_773558	chr10_95673758_-	intronic
CAediting_773559	chr10_95673770_-	intronic
CAediting_773560	chr10_95673778_-	intronic
CAediting_773561	chr10_95673783_-	intronic
CAediting_773562	chr10_95673788_-	intronic
CAediting_773563	chr10_95673790_-	intronic
CAediting_773564	chr10_95673814_-	intronic
CAediting_773565	chr10_95673839_-	intronic
CAediting_773566	chr10_95673845_-	intronic
CAediting_773567	chr10_95675216_-	intronic
CAediting_773568	chr10_95675225_-	intronic
CAediting_773569	chr10_95675230_-	intronic
CAediting_773570	chr10_95675320_-	intronic
CAediting_773571	chr10_95675325_-	intronic
CAediting_773572	chr10_95675326_-	intronic
CAediting_773573	chr10_95675387_-	intronic
CAediting_773574	chr10_95676352_-	intronic
CAediting_773575	chr10_95676423_-	intronic
CAediting_773576	chr10_95676424_-	intronic
CAediting_773577	chr10_95676438_-	intronic
CAediting_773578	chr10_95676484_-	intronic
CAediting_773579	chr10_95678340_-	intronic
CAediting_773580	chr10_95678349_-	intronic
CAediting_773581	chr10_95678421_-	intronic
CAediting_773582	chr10_95678457_-	intronic
CAediting_773583	chr10_95678486_-	intronic
CAediting_773584	chr10_95678497_-	intronic
CAediting_773585	chr10_95680863_-	intronic
CAediting_773586	chr10_95680864_-	intronic
CAediting_773587	chr10_95680868_-	intronic
CAediting_773588	chr10_95680916_-	intronic
CAediting_773589	chr10_95680917_-	intronic
CAediting_773590	chr10_95680971_-	intronic
CAediting_773591	chr10_95680979_-	intronic
CAediting_773592	chr10_95681049_-	intronic
CAediting_773593	chr10_95681165_-	intronic
CAediting_773594	chr10_95681168_-	intronic
CAediting_773595	chr10_95681213_-	intronic
CAediting_773596	chr10_95681214_-	intronic
CAediting_773597	chr10_95681294_-	intronic
CAediting_773598	chr10_95681295_-	intronic
CAediting_773599	chr10_95681318_-	intronic
CAediting_773600	chr10_95681349_-	intronic
CAediting_773601	chr10_95681355_-	intronic
CAediting_773602	chr10_95681992_-	intronic
CAediting_773603	chr10_95682095_-	intronic
CAediting_773604	chr10_95682100_-	intronic
CAediting_773605	chr10_95682149_-	intronic
CAediting_773606	chr10_95682450_-	intronic
CAediting_773607	chr10_95685982_-	intronic
CAediting_773608	chr10_95688163_-	ncRNA_intronic
CAediting_773609	chr10_95688172_-	ncRNA_intronic
CAediting_773610	chr10_95688184_-	ncRNA_intronic
CAediting_773611	chr10_95688197_-	ncRNA_intronic
CAediting_773612	chr10_95688209_-	ncRNA_intronic
CAediting_773613	chr10_95688223_-	ncRNA_intronic
CAediting_773614	chr10_95688226_-	ncRNA_intronic
CAediting_773615	chr10_95688232_-	ncRNA_intronic
CAediting_773616	chr10_95688241_-	ncRNA_intronic
CAediting_773617	chr10_95688242_-	ncRNA_intronic
CAediting_773618	chr10_95688255_-	ncRNA_intronic
CAediting_773619	chr10_95688268_-	ncRNA_intronic
CAediting_773620	chr10_95688278_-	ncRNA_intronic
CAediting_773621	chr10_95688307_-	ncRNA_intronic
CAediting_773622	chr10_95688314_-	ncRNA_intronic
CAediting_773623	chr10_95688327_-	ncRNA_intronic
CAediting_773624	chr10_95688328_-	ncRNA_intronic
CAediting_773625	chr10_95688357_-	ncRNA_intronic
CAediting_773626	chr10_95688364_-	ncRNA_intronic
CAediting_773627	chr10_95688383_-	ncRNA_intronic
CAediting_773628	chr10_95688385_-	ncRNA_intronic
CAediting_773629	chr10_95689204_-	ncRNA_intronic
CAediting_773630	chr10_95689207_-	ncRNA_intronic
CAediting_773631	chr10_95690079_-	ncRNA_intronic
CAediting_773632	chr10_95690084_-	ncRNA_intronic
CAediting_773633	chr10_95690122_-	ncRNA_intronic
CAediting_773634	chr10_95690148_-	ncRNA_intronic
CAediting_773635	chr10_95690151_-	ncRNA_intronic
CAediting_773636	chr10_95690157_-	ncRNA_intronic
CAediting_773637	chr10_95690159_-	ncRNA_intronic
CAediting_773638	chr10_95690161_-	ncRNA_intronic
CAediting_773639	chr10_95690162_-	ncRNA_intronic
CAediting_773640	chr10_95690163_-	ncRNA_intronic
CAediting_773641	chr10_95690164_-	ncRNA_intronic
CAediting_773642	chr10_95690166_-	ncRNA_intronic
CAediting_773643	chr10_95690179_-	ncRNA_intronic
CAediting_773644	chr10_95690180_-	ncRNA_intronic
CAediting_773645	chr10_95690183_-	ncRNA_intronic
CAediting_773646	chr10_95690187_-	ncRNA_intronic
CAediting_773647	chr10_95690208_-	ncRNA_intronic
CAediting_773648	chr10_95690230_-	ncRNA_intronic
CAediting_773649	chr10_95690235_-	ncRNA_intronic
CAediting_773650	chr10_95690251_-	ncRNA_intronic
CAediting_773651	chr10_95690255_-	ncRNA_intronic
CAediting_773652	chr10_95691198_-	ncRNA_intronic
CAediting_773653	chr10_95691206_-	ncRNA_intronic
CAediting_773654	chr10_95691274_-	ncRNA_intronic
CAediting_773655	chr10_95691281_-	ncRNA_intronic
CAediting_773656	chr10_95691290_-	ncRNA_intronic
CAediting_773657	chr10_95691291_-	ncRNA_intronic
CAediting_773658	chr10_95691313_-	ncRNA_intronic
CAediting_773659	chr10_95691320_-	ncRNA_intronic
CAediting_773660	chr10_95691321_-	ncRNA_intronic
CAediting_773661	chr10_95691322_-	ncRNA_intronic
CAediting_773662	chr10_95691328_-	ncRNA_intronic
CAediting_773663	chr10_95691347_-	ncRNA_intronic
CAediting_773664	chr10_95691357_-	ncRNA_intronic
CAediting_773665	chr10_95691361_-	ncRNA_intronic
CAediting_773666	chr10_95691362_-	ncRNA_intronic
CAediting_773667	chr10_95691367_-	ncRNA_intronic
CAediting_773668	chr10_95691381_-	ncRNA_intronic
CAediting_773669	chr10_95691396_-	ncRNA_intronic
CAediting_773670	chr10_95691425_-	ncRNA_intronic
CAediting_773671	chr10_95691426_-	ncRNA_intronic
CAediting_773672	chr10_95692252_-	ncRNA_intronic
CAediting_773673	chr10_95692314_-	ncRNA_intronic
CAediting_773674	chr10_95692340_-	ncRNA_intronic
CAediting_773675	chr10_95692343_-	ncRNA_intronic
CAediting_773676	chr10_95692357_-	ncRNA_intronic
CAediting_773677	chr10_95692362_-	ncRNA_intronic
CAediting_773678	chr10_95692384_-	ncRNA_intronic
CAediting_773679	chr10_95692419_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_773511	chr10_95665375_-	SINE	Alu	AluSx1
CAediting_773515	chr10_95666101_-	SINE	Alu	AluY
CAediting_773516	chr10_95670426_-	SINE	Alu	AluJb
CAediting_773517	chr10_95670427_-	SINE	Alu	AluJb
CAediting_773518	chr10_95670488_-	SINE	Alu	AluJb
CAediting_773519	chr10_95670571_-	SINE	Alu	AluJb
CAediting_773520	chr10_95670640_-	SINE	Alu	AluJb
CAediting_773521	chr10_95670647_-	SINE	Alu	AluJb
CAediting_773522	chr10_95670663_-	SINE	Alu	AluJb
CAediting_773523	chr10_95670752_-	SINE	Alu	AluJb
CAediting_773524	chr10_95670754_-	SINE	Alu	AluJb
CAediting_773525	chr10_95670787_-	SINE	Alu	AluJb
CAediting_773526	chr10_95670791_-	SINE	Alu	AluJb
CAediting_773527	chr10_95670807_-	SINE	Alu	AluJb
CAediting_773528	chr10_95670866_-	SINE	Alu	AluJb
CAediting_773529	chr10_95670871_-	SINE	Alu	AluJb
CAediting_773530	chr10_95670886_-	SINE	Alu	AluJb
CAediting_773531	chr10_95670927_-	SINE	Alu	AluJb
CAediting_773532	chr10_95670942_-	SINE	Alu	AluJb
CAediting_773533	chr10_95670952_-	SINE	Alu	AluJb
CAediting_773534	chr10_95671765_-	SINE	Alu	AluSp
CAediting_773535	chr10_95671847_-	SINE	Alu	AluSp
CAediting_773536	chr10_95672778_-	SINE	Alu	AluSz
CAediting_773537	chr10_95672789_-	SINE	Alu	AluSz
CAediting_773538	chr10_95672790_-	SINE	Alu	AluSz
CAediting_773539	chr10_95672821_-	SINE	Alu	AluSz
CAediting_773540	chr10_95672824_-	SINE	Alu	AluSz
CAediting_773541	chr10_95672825_-	SINE	Alu	AluSz
CAediting_773542	chr10_95672843_-	SINE	Alu	AluSz
CAediting_773543	chr10_95672875_-	SINE	Alu	AluSz
CAediting_773544	chr10_95672906_-	SINE	Alu	AluSz
CAediting_773545	chr10_95672919_-	SINE	Alu	AluSz
CAediting_773546	chr10_95672966_-	SINE	Alu	AluSz
CAediting_773547	chr10_95673580_-	SINE	Alu	AluJr
CAediting_773548	chr10_95673598_-	SINE	Alu	AluJr
CAediting_773549	chr10_95673608_-	SINE	Alu	AluJr
CAediting_773550	chr10_95673625_-	SINE	Alu	AluJr
CAediting_773551	chr10_95673638_-	SINE	Alu	AluJr
CAediting_773552	chr10_95673640_-	SINE	Alu	AluJr
CAediting_773553	chr10_95673651_-	SINE	Alu	AluJr
CAediting_773554	chr10_95673687_-	SINE	Alu	AluJr
CAediting_773555	chr10_95673717_-	SINE	Alu	AluJr
CAediting_773556	chr10_95673723_-	SINE	Alu	AluJr
CAediting_773557	chr10_95673740_-	SINE	Alu	AluJr
CAediting_773558	chr10_95673758_-	SINE	Alu	AluJr
CAediting_773559	chr10_95673770_-	SINE	Alu	AluJr
CAediting_773560	chr10_95673778_-	SINE	Alu	AluJr
CAediting_773561	chr10_95673783_-	SINE	Alu	AluJr
CAediting_773562	chr10_95673788_-	SINE	Alu	AluJr
CAediting_773563	chr10_95673790_-	SINE	Alu	AluJr
CAediting_773564	chr10_95673814_-	SINE	Alu	AluJr
CAediting_773565	chr10_95673839_-	SINE	Alu	AluJr
CAediting_773566	chr10_95673845_-	SINE	Alu	AluJr
CAediting_773567	chr10_95675216_-	SINE	Alu	AluSz6
CAediting_773568	chr10_95675225_-	SINE	Alu	AluSz6
CAediting_773569	chr10_95675230_-	SINE	Alu	AluSz6
CAediting_773570	chr10_95675320_-	SINE	Alu	AluSz6
CAediting_773571	chr10_95675325_-	SINE	Alu	AluSz6
CAediting_773572	chr10_95675326_-	SINE	Alu	AluSz6
CAediting_773573	chr10_95675387_-	SINE	Alu	AluSz6
CAediting_773574	chr10_95676352_-	SINE	Alu	AluSx1
CAediting_773575	chr10_95676423_-	SINE	Alu	AluSx1
CAediting_773576	chr10_95676424_-	SINE	Alu	AluSx1
CAediting_773577	chr10_95676438_-	SINE	Alu	AluSx1
CAediting_773578	chr10_95676484_-	SINE	Alu	AluSx1
CAediting_773579	chr10_95678340_-	SINE	Alu	AluSq
CAediting_773580	chr10_95678349_-	SINE	Alu	AluSq
CAediting_773581	chr10_95678421_-	SINE	Alu	AluSq
CAediting_773582	chr10_95678457_-	SINE	Alu	AluSq
CAediting_773583	chr10_95678486_-	SINE	Alu	AluSq
CAediting_773584	chr10_95678497_-	SINE	Alu	AluSq
CAediting_773585	chr10_95680863_-	SINE	Alu	AluSx3
CAediting_773586	chr10_95680864_-	SINE	Alu	AluSx3
CAediting_773587	chr10_95680868_-	SINE	Alu	AluSx3
CAediting_773588	chr10_95680916_-	SINE	Alu	AluSx3
CAediting_773589	chr10_95680917_-	SINE	Alu	AluSx3
CAediting_773590	chr10_95680971_-	SINE	Alu	AluSx3
CAediting_773591	chr10_95680979_-	SINE	Alu	AluSx3
CAediting_773592	chr10_95681049_-	SINE	Alu	AluSx3
CAediting_773593	chr10_95681165_-	SINE	Alu	AluSx1
CAediting_773594	chr10_95681168_-	SINE	Alu	AluSx1
CAediting_773595	chr10_95681213_-	SINE	Alu	AluSx1
CAediting_773596	chr10_95681214_-	SINE	Alu	AluSx1
CAediting_773597	chr10_95681294_-	SINE	Alu	AluSx1
CAediting_773598	chr10_95681295_-	SINE	Alu	AluSx1
CAediting_773599	chr10_95681318_-	SINE	Alu	AluSx1
CAediting_773600	chr10_95681349_-	SINE	Alu	AluSx1
CAediting_773601	chr10_95681355_-	SINE	Alu	AluSx1
CAediting_773602	chr10_95681992_-	SINE	Alu	AluJb
CAediting_773603	chr10_95682095_-	SINE	Alu	AluJb
CAediting_773604	chr10_95682100_-	SINE	Alu	AluJb
CAediting_773605	chr10_95682149_-	SINE	Alu	AluJb
CAediting_773606	chr10_95682450_-	SINE	Alu	AluSx4
CAediting_773607	chr10_95685982_-	SINE	Alu	AluJr
CAediting_773608	chr10_95688163_-	SINE	Alu	AluSq
CAediting_773609	chr10_95688172_-	SINE	Alu	AluSq
CAediting_773610	chr10_95688184_-	SINE	Alu	AluSq
CAediting_773611	chr10_95688197_-	SINE	Alu	AluSq
CAediting_773612	chr10_95688209_-	SINE	Alu	AluSq
CAediting_773613	chr10_95688223_-	SINE	Alu	AluSq
CAediting_773614	chr10_95688226_-	SINE	Alu	AluSq
CAediting_773615	chr10_95688232_-	SINE	Alu	AluSq
CAediting_773616	chr10_95688241_-	SINE	Alu	AluSq
CAediting_773617	chr10_95688242_-	SINE	Alu	AluSq
CAediting_773618	chr10_95688255_-	SINE	Alu	AluSq
CAediting_773619	chr10_95688268_-	SINE	Alu	AluSq
CAediting_773620	chr10_95688278_-	SINE	Alu	AluSq
CAediting_773621	chr10_95688307_-	SINE	Alu	AluSq
CAediting_773622	chr10_95688314_-	SINE	Alu	AluSq
CAediting_773623	chr10_95688327_-	SINE	Alu	AluSq
CAediting_773624	chr10_95688328_-	SINE	Alu	AluSq
CAediting_773625	chr10_95688357_-	SINE	Alu	AluSq
CAediting_773626	chr10_95688364_-	SINE	Alu	AluSq
CAediting_773627	chr10_95688383_-	SINE	Alu	AluSq
CAediting_773628	chr10_95688385_-	SINE	Alu	AluSq
CAediting_773629	chr10_95689204_-	DNA	hAT-Charlie	MER5A1
CAediting_773630	chr10_95689207_-	DNA	hAT-Charlie	MER5A1
CAediting_773631	chr10_95690079_-	SINE	Alu	AluJo
CAediting_773632	chr10_95690084_-	SINE	Alu	AluJo
CAediting_773633	chr10_95690122_-	SINE	Alu	AluJo
CAediting_773634	chr10_95690148_-	SINE	Alu	AluJo
CAediting_773635	chr10_95690151_-	SINE	Alu	AluJo
CAediting_773636	chr10_95690157_-	SINE	Alu	AluJo
CAediting_773637	chr10_95690159_-	SINE	Alu	AluJo
CAediting_773638	chr10_95690161_-	SINE	Alu	AluJo
CAediting_773639	chr10_95690162_-	SINE	Alu	AluJo
CAediting_773640	chr10_95690163_-	SINE	Alu	AluJo
CAediting_773641	chr10_95690164_-	SINE	Alu	AluJo
CAediting_773642	chr10_95690166_-	SINE	Alu	AluJo
CAediting_773643	chr10_95690179_-	SINE	Alu	AluJo
CAediting_773644	chr10_95690180_-	SINE	Alu	AluJo
CAediting_773645	chr10_95690183_-	SINE	Alu	AluJo
CAediting_773646	chr10_95690187_-	SINE	Alu	AluJo
CAediting_773647	chr10_95690208_-	SINE	Alu	AluJo
CAediting_773648	chr10_95690230_-	SINE	Alu	AluJo
CAediting_773649	chr10_95690235_-	SINE	Alu	AluJo
CAediting_773650	chr10_95690251_-	SINE	Alu	AluJo
CAediting_773651	chr10_95690255_-	SINE	Alu	AluJo
CAediting_773652	chr10_95691198_-	SINE	Alu	AluSx1
CAediting_773653	chr10_95691206_-	SINE	Alu	AluSx1
CAediting_773654	chr10_95691274_-	SINE	Alu	AluSx1
CAediting_773655	chr10_95691281_-	SINE	Alu	AluSx1
CAediting_773656	chr10_95691290_-	SINE	Alu	AluSx1
CAediting_773657	chr10_95691291_-	SINE	Alu	AluSx1
CAediting_773658	chr10_95691313_-	SINE	Alu	AluSx1
CAediting_773659	chr10_95691320_-	SINE	Alu	AluSx1
CAediting_773660	chr10_95691321_-	SINE	Alu	AluSx1
CAediting_773661	chr10_95691322_-	SINE	Alu	AluSx1
CAediting_773662	chr10_95691328_-	SINE	Alu	AluSx1
CAediting_773663	chr10_95691347_-	SINE	Alu	AluSx1
CAediting_773664	chr10_95691357_-	SINE	Alu	AluSx1
CAediting_773665	chr10_95691361_-	SINE	Alu	AluSx1
CAediting_773666	chr10_95691362_-	SINE	Alu	AluSx1
CAediting_773667	chr10_95691367_-	SINE	Alu	AluSx1
CAediting_773668	chr10_95691381_-	SINE	Alu	AluSx1
CAediting_773669	chr10_95691396_-	SINE	Alu	AluSx1
CAediting_773670	chr10_95691425_-	SINE	Alu	AluSx1
CAediting_773671	chr10_95691426_-	SINE	Alu	AluSx1
CAediting_773672	chr10_95692252_-	SINE	Alu	AluSc
CAediting_773673	chr10_95692314_-	SINE	Alu	AluSc
CAediting_773674	chr10_95692340_-	SINE	Alu	AluSc
CAediting_773675	chr10_95692343_-	SINE	Alu	AluSc
CAediting_773676	chr10_95692357_-	SINE	Alu	AluSc
CAediting_773677	chr10_95692362_-	SINE	Alu	AluSc
CAediting_773678	chr10_95692384_-	SINE	Alu	AluSc
CAediting_773679	chr10_95692419_-	SINE	Alu	AluSc

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RNA A-to-I editing events in the alternative splicing sites for TCTN3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000119977.19.TCTN3.

Correlation between RNA A-to-I editing and PSI for ENSG00000119977.19.TCTN3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCTN3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

THCA.CAediting_773619.ENSG00000119977.TCTN3.png
Soverview

THCA.CAediting_773633.ENSG00000119977.TCTN3.png
Soverview

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Protein coding region RNA A-to-I editings for TCTN3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TCTN3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000119977.19	ENST00000371217	hsa-miR-200b-3p	95663964	95663969	6mer	95663963	95663984	147	-20.33
CAediting_393	chr1_1167164_+	ENSG00000119977.19	ENST00000265993	hsa-miR-200b-3p	95663964	95663969	6mer	95663963	95663984	147	-20.33
CAediting_393	chr1_1167164_+	ENSG00000119977.19	ENST00000430368	hsa-miR-200b-3p	95663964	95663969	6mer	95663963	95663984	147	-20.33
CAediting_228905	chr2_188297554_+	ENSG00000119977.19	ENST00000371217	hsa-miR-561-3p	95664022	95664028	7mer-m8	95664021	95664042	141	-12.11
CAediting_228905	chr2_188297554_+	ENSG00000119977.19	ENST00000265993	hsa-miR-561-3p	95664022	95664028	7mer-m8	95664021	95664042	141	-12.11
CAediting_228905	chr2_188297554_+	ENSG00000119977.19	ENST00000430368	hsa-miR-561-3p	95664022	95664028	7mer-m8	95664021	95664042	141	-12.11

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TCTN3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TCTN3

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for TCTN3

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for TCTN3

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TCTN3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TCTN3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TCTN3	C0406727	Orofaciodigital syndrome 4	2	CTD_human;GENOMICS_ENGLAND;ORPHANET
TCTN3	C0431399	Familial aplasia of the vermis	2	GENOMICS_ENGLAND
TCTN3	C3553758	JOUBERT SYNDROME 18	2	GENOMICS_ENGLAND;UNIPROT
TCTN3	C0152427	Polydactyly	1	GENOMICS_ENGLAND
TCTN3	C2745997	OROFACIODIGITAL SYNDROME VI	1	ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene