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Editing gene: SZRD1 (CAeditome ID:26099)

Gene summary for SZRD1

Gene summary

Gene information	Gene symbol	SZRD1
	Gene ID	26099
	Gene name	SUZ RNA binding domain containing 1
	Synonyms	C1orf144
	Cytomap	1p36.13
	Type of gene	protein-coding
	Description	SUZ domain-containing protein 1UPF0485 protein C1orf144putative MAPK activating protein PM20,PM21putative MAPK-activating protein PM18/PM20/PM22
	Modification date	20210518
	UniProtAcc	Q7Z422
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SZRD1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000055070.15

RNA A-to-I editing events in Cancer.

CAediting_18066(16369712, +), CAediting_18067(16369713, +), CAediting_18068(16369762, +), CAediting_18069(16369768, +), CAediting_18070(16369769, +), CAediting_18071(16369810, +), CAediting_18072(16371215, +), CAediting_18073(16371288, +), CAediting_18074(16371336, +), CAediting_18075(16372353, +), CAediting_18076(16373330, +), CAediting_18077(16373429, +), CAediting_18078(16373458, +), CAediting_18079(16373459, +), CAediting_18080(16373733, +), CAediting_18081(16373745, +), CAediting_18082(16373800, +), CAediting_18083(16373838, +), CAediting_18084(16375017, +), CAediting_18085(16375415, +), CAediting_18086(16375418, +), CAediting_18087(16375441, +), CAediting_18088(16375444, +), CAediting_18089(16375513, +), CAediting_18090(16375581, +), CAediting_18091(16376659, +), CAediting_18092(16376663, +), CAediting_18093(16376686, +), CAediting_18094(16377336, +), CAediting_18095(16377345, +), CAediting_18096(16377381, +), CAediting_18097(16377382, +), CAediting_18098(16377387, +), CAediting_18099(16377396, +), CAediting_18100(16377397, +), CAediting_18101(16377406, +), CAediting_18102(16377407, +), CAediting_18103(16377422, +), CAediting_18104(16377431, +), CAediting_18105(16377465, +), CAediting_18106(16377470, +), CAediting_18107(16377474, +), CAediting_18108(16377478, +), CAediting_18109(16377506, +), CAediting_18110(16378509, +), CAediting_18111(16379245, +), CAediting_18112(16379259, +), CAediting_18113(16379324, +), CAediting_18114(16379878, +), CAediting_18115(16379886, +), CAediting_18116(16380445, +), CAediting_18117(16380569, +), CAediting_18118(16380586, +), CAediting_18119(16381012, +), CAediting_18120(16381022, +), CAediting_18121(16381111, +), CAediting_18122(16381133, +), CAediting_18123(16381147, +), CAediting_18124(16381163, +), CAediting_18125(16381174, +), CAediting_18126(16381195, +), CAediting_18127(16381234, +), CAediting_18128(16381437, +), CAediting_18129(16381773, +), CAediting_18130(16381776, +), CAediting_18131(16382715, +), CAediting_18132(16382729, +), CAediting_18133(16383005, +), CAediting_18134(16383068, +), CAediting_18135(16383417, +), CAediting_18136(16384279, +), CAediting_18137(16384289, +), CAediting_18138(16384292, +), CAediting_18139(16384306, +), CAediting_18140(16384319, +), CAediting_18141(16384336, +),

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RNA editing positional annotations for SZRD1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_18066	chr1_16369712_+	ncRNA_intronic
CAediting_18067	chr1_16369713_+	ncRNA_intronic
CAediting_18068	chr1_16369762_+	ncRNA_intronic
CAediting_18069	chr1_16369768_+	ncRNA_intronic
CAediting_18070	chr1_16369769_+	ncRNA_intronic
CAediting_18071	chr1_16369810_+	ncRNA_intronic
CAediting_18072	chr1_16371215_+	ncRNA_intronic
CAediting_18073	chr1_16371288_+	ncRNA_intronic
CAediting_18074	chr1_16371336_+	ncRNA_intronic
CAediting_18075	chr1_16372353_+	ncRNA_intronic
CAediting_18076	chr1_16373330_+	ncRNA_intronic
CAediting_18077	chr1_16373429_+	ncRNA_intronic
CAediting_18078	chr1_16373458_+	ncRNA_intronic
CAediting_18079	chr1_16373459_+	ncRNA_intronic
CAediting_18080	chr1_16373733_+	ncRNA_intronic
CAediting_18081	chr1_16373745_+	ncRNA_intronic
CAediting_18082	chr1_16373800_+	ncRNA_intronic
CAediting_18083	chr1_16373838_+	ncRNA_intronic
CAediting_18084	chr1_16375017_+	ncRNA_intronic
CAediting_18085	chr1_16375415_+	ncRNA_intronic
CAediting_18086	chr1_16375418_+	ncRNA_intronic
CAediting_18087	chr1_16375441_+	ncRNA_intronic
CAediting_18088	chr1_16375444_+	ncRNA_intronic
CAediting_18089	chr1_16375513_+	ncRNA_intronic
CAediting_18090	chr1_16375581_+	ncRNA_intronic
CAediting_18091	chr1_16376659_+	ncRNA_intronic
CAediting_18092	chr1_16376663_+	ncRNA_intronic
CAediting_18093	chr1_16376686_+	ncRNA_intronic
CAediting_18094	chr1_16377336_+	ncRNA_intronic
CAediting_18095	chr1_16377345_+	ncRNA_intronic
CAediting_18096	chr1_16377381_+	ncRNA_intronic
CAediting_18097	chr1_16377382_+	ncRNA_intronic
CAediting_18098	chr1_16377387_+	ncRNA_intronic
CAediting_18099	chr1_16377396_+	ncRNA_intronic
CAediting_18100	chr1_16377397_+	ncRNA_intronic
CAediting_18101	chr1_16377406_+	ncRNA_intronic
CAediting_18102	chr1_16377407_+	ncRNA_intronic
CAediting_18103	chr1_16377422_+	ncRNA_intronic
CAediting_18104	chr1_16377431_+	ncRNA_intronic
CAediting_18105	chr1_16377465_+	ncRNA_intronic
CAediting_18106	chr1_16377470_+	ncRNA_intronic
CAediting_18107	chr1_16377474_+	ncRNA_intronic
CAediting_18108	chr1_16377478_+	ncRNA_intronic
CAediting_18109	chr1_16377506_+	ncRNA_intronic
CAediting_18110	chr1_16378509_+	ncRNA_intronic
CAediting_18111	chr1_16379245_+	ncRNA_intronic
CAediting_18112	chr1_16379259_+	ncRNA_intronic
CAediting_18113	chr1_16379324_+	ncRNA_intronic
CAediting_18114	chr1_16379878_+	ncRNA_intronic
CAediting_18115	chr1_16379886_+	ncRNA_intronic
CAediting_18116	chr1_16380445_+	ncRNA_intronic
CAediting_18117	chr1_16380569_+	ncRNA_intronic
CAediting_18118	chr1_16380586_+	ncRNA_intronic
CAediting_18119	chr1_16381012_+	ncRNA_intronic
CAediting_18120	chr1_16381022_+	ncRNA_intronic
CAediting_18121	chr1_16381111_+	ncRNA_intronic
CAediting_18122	chr1_16381133_+	ncRNA_intronic
CAediting_18123	chr1_16381147_+	ncRNA_intronic
CAediting_18124	chr1_16381163_+	ncRNA_intronic
CAediting_18125	chr1_16381174_+	ncRNA_intronic
CAediting_18126	chr1_16381195_+	ncRNA_intronic
CAediting_18127	chr1_16381234_+	ncRNA_intronic
CAediting_18128	chr1_16381437_+	ncRNA_intronic
CAediting_18129	chr1_16381773_+	ncRNA_intronic
CAediting_18130	chr1_16381776_+	ncRNA_intronic
CAediting_18131	chr1_16382715_+	ncRNA_intronic
CAediting_18132	chr1_16382729_+	ncRNA_intronic
CAediting_18133	chr1_16383005_+	ncRNA_intronic
CAediting_18134	chr1_16383068_+	ncRNA_intronic
CAediting_18135	chr1_16383417_+	ncRNA_intronic
CAediting_18136	chr1_16384279_+	ncRNA_intronic
CAediting_18137	chr1_16384289_+	ncRNA_intronic
CAediting_18138	chr1_16384292_+	ncRNA_intronic
CAediting_18139	chr1_16384306_+	ncRNA_intronic
CAediting_18140	chr1_16384319_+	ncRNA_intronic
CAediting_18141	chr1_16384336_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_18066	chr1_16369712_+	SINE	Alu	AluSq2
CAediting_18067	chr1_16369713_+	SINE	Alu	AluSq2
CAediting_18068	chr1_16369762_+	SINE	Alu	AluSq2
CAediting_18069	chr1_16369768_+	SINE	Alu	AluSq2
CAediting_18070	chr1_16369769_+	SINE	Alu	AluSq2
CAediting_18071	chr1_16369810_+	SINE	Alu	AluSq2
CAediting_18072	chr1_16371215_+	SINE	Alu	AluJr
CAediting_18073	chr1_16371288_+	SINE	Alu	AluJr
CAediting_18074	chr1_16371336_+	SINE	Alu	AluJr
CAediting_18075	chr1_16372353_+	SINE	Alu	AluSx1
CAediting_18076	chr1_16373330_+	SINE	Alu	AluSp
CAediting_18077	chr1_16373429_+	SINE	Alu	AluSp
CAediting_18078	chr1_16373458_+	SINE	Alu	AluSp
CAediting_18079	chr1_16373459_+	SINE	Alu	AluSp
CAediting_18080	chr1_16373733_+	SINE	Alu	AluJb
CAediting_18081	chr1_16373745_+	SINE	Alu	AluJb
CAediting_18082	chr1_16373800_+	SINE	Alu	AluJb
CAediting_18083	chr1_16373838_+	SINE	Alu	AluJb
CAediting_18084	chr1_16375017_+	SINE	Alu	AluSg
CAediting_18085	chr1_16375415_+	SINE	Alu	AluSx
CAediting_18086	chr1_16375418_+	SINE	Alu	AluSx
CAediting_18087	chr1_16375441_+	SINE	Alu	AluSx
CAediting_18088	chr1_16375444_+	SINE	Alu	AluSx
CAediting_18089	chr1_16375513_+	SINE	Alu	AluSx
CAediting_18090	chr1_16375581_+	SINE	Alu	AluSx
CAediting_18091	chr1_16376659_+	SINE	Alu	AluSx1
CAediting_18092	chr1_16376663_+	SINE	Alu	AluSx1
CAediting_18093	chr1_16376686_+	SINE	Alu	AluSx1
CAediting_18094	chr1_16377336_+	SINE	Alu	AluSx
CAediting_18095	chr1_16377345_+	SINE	Alu	AluSx
CAediting_18096	chr1_16377381_+	SINE	Alu	AluSx
CAediting_18097	chr1_16377382_+	SINE	Alu	AluSx
CAediting_18098	chr1_16377387_+	SINE	Alu	AluSx
CAediting_18099	chr1_16377396_+	SINE	Alu	AluSx
CAediting_18100	chr1_16377397_+	SINE	Alu	AluSx
CAediting_18101	chr1_16377406_+	SINE	Alu	AluSx
CAediting_18102	chr1_16377407_+	SINE	Alu	AluSx
CAediting_18103	chr1_16377422_+	SINE	Alu	AluSx
CAediting_18104	chr1_16377431_+	SINE	Alu	AluSx
CAediting_18105	chr1_16377465_+	SINE	Alu	AluSx
CAediting_18106	chr1_16377470_+	SINE	Alu	AluSx
CAediting_18107	chr1_16377474_+	SINE	Alu	AluSx
CAediting_18108	chr1_16377478_+	SINE	Alu	AluSx
CAediting_18109	chr1_16377506_+	SINE	Alu	AluSx
CAediting_18110	chr1_16378509_+	SINE	Alu	AluSx1
CAediting_18111	chr1_16379245_+	SINE	Alu	AluY
CAediting_18112	chr1_16379259_+	SINE	Alu	AluY
CAediting_18113	chr1_16379324_+	SINE	Alu	AluY
CAediting_18114	chr1_16379878_+	SINE	Alu	AluSx3
CAediting_18115	chr1_16379886_+	SINE	Alu	AluSx3
CAediting_18116	chr1_16380445_+	SINE	Alu	AluSz
CAediting_18117	chr1_16380569_+	SINE	Alu	AluSp
CAediting_18118	chr1_16380586_+	SINE	Alu	AluSp
CAediting_18119	chr1_16381012_+	SINE	Alu	AluJr
CAediting_18120	chr1_16381022_+	SINE	Alu	AluJr
CAediting_18121	chr1_16381111_+	SINE	Alu	AluJr
CAediting_18122	chr1_16381133_+	SINE	Alu	AluJr
CAediting_18123	chr1_16381147_+	SINE	Alu	AluJr
CAediting_18124	chr1_16381163_+	SINE	Alu	AluJr
CAediting_18125	chr1_16381174_+	SINE	Alu	AluJr
CAediting_18126	chr1_16381195_+	SINE	Alu	AluJr
CAediting_18127	chr1_16381234_+	SINE	Alu	AluJr
CAediting_18128	chr1_16381437_+	SINE	Alu	AluSz
CAediting_18129	chr1_16381773_+	SINE	Alu	AluSx1
CAediting_18130	chr1_16381776_+	SINE	Alu	AluSx1
CAediting_18131	chr1_16382715_+	SINE	Alu	AluSx
CAediting_18132	chr1_16382729_+	SINE	Alu	AluSx
CAediting_18133	chr1_16383005_+	SINE	Alu	AluSx1
CAediting_18134	chr1_16383068_+	SINE	Alu	AluSx1
CAediting_18135	chr1_16383417_+	SINE	Alu	AluJr
CAediting_18136	chr1_16384279_+	SINE	Alu	FLAM_C
CAediting_18137	chr1_16384289_+	SINE	Alu	FLAM_C
CAediting_18138	chr1_16384292_+	SINE	Alu	FLAM_C
CAediting_18139	chr1_16384306_+	SINE	Alu	FLAM_C
CAediting_18140	chr1_16384319_+	SINE	Alu	FLAM_C
CAediting_18141	chr1_16384336_+	SINE	Alu	FLAM_C

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RNA A-to-I editing events in the alternative splicing sites for SZRD1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000055070.15.SZRD1.

Correlation between RNA A-to-I editing and PSI for ENSG00000055070.15.SZRD1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SZRD1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SZRD1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SZRD1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000055070.15	ENST00000476423	hsa-miR-4477b	16393310	16393316	7mer-m8	16393292	16393317	150	-15.44
CAediting_1229415	chr17_67471547_+	ENSG00000055070.15	ENST00000401089	hsa-miR-548aa	16397497	16397502	6mer	16397477	16397503	140	-14.11
CAediting_1351755	chr19_40282625_-	ENSG00000055070.15	ENST00000401089	hsa-miR-641	16395558	16395564	7mer-m8	16395542	16395565	141	-13.74
CAediting_1368054	chr19_46709310_-	ENSG00000055070.15	ENST00000401089	hsa-miR-320e	16396282	16396289	8mer-1a	16396272	16396289	145	-15.53
CAediting_1368054	chr19_46709310_-	ENSG00000055070.15	ENST00000401089	hsa-miR-320e	16397587	16397593	7mer-m8	16397577	16397594	150	-22.42
CAediting_86358	chr1_109598906_+	ENSG00000055070.15	ENST00000401089	hsa-miR-197-5p	16398059	16398064	6mer	16398049	16398070	146	-30.91
CAediting_86358	chr1_109598906_+	ENSG00000055070.15	ENST00000401089	hsa-miR-197-5p	16398064	16398069	6mer	16398049	16398070	146	-30.91
CAediting_228905	chr2_188297554_+	ENSG00000055070.15	ENST00000401089	hsa-miR-561-3p	16396241	16396246	6mer	16396224	16396247	150	-16.35
CAediting_524911	chr7_5495852_-	ENSG00000055070.15	ENST00000401089	hsa-miR-589-3p	16397835	16397841	7mer-m8	16397819	16397842	140	-16.18
CAediting_77128	chr1_85133844_+	ENSG00000055070.15	ENST00000476423	hsa-miR-4423-3p	16393252	16393258	7mer-m8	16393239	16393259	140	-14.18
CAediting_396018	chr5_1062918_-	ENSG00000055070.15	ENST00000476423	hsa-miR-4635	16393311	16393318	8mer-1a	16393297	16393318	141	-13.21
CAediting_1229415	chr17_67471547_+	ENSG00000055070.15	ENST00000492354	hsa-miR-548aa	16397497	16397502	6mer	16397477	16397503	140	-14.11
CAediting_1351755	chr19_40282625_-	ENSG00000055070.15	ENST00000492354	hsa-miR-641	16395558	16395564	7mer-m8	16395542	16395565	141	-13.74
CAediting_1368054	chr19_46709310_-	ENSG00000055070.15	ENST00000492354	hsa-miR-320e	16396282	16396289	8mer-1a	16396272	16396289	145	-15.53
CAediting_1368054	chr19_46709310_-	ENSG00000055070.15	ENST00000492354	hsa-miR-320e	16397587	16397593	7mer-m8	16397577	16397594	150	-22.42
CAediting_86358	chr1_109598906_+	ENSG00000055070.15	ENST00000492354	hsa-miR-197-5p	16398059	16398064	6mer	16398049	16398070	146	-30.91
CAediting_86358	chr1_109598906_+	ENSG00000055070.15	ENST00000492354	hsa-miR-197-5p	16398064	16398069	6mer	16398049	16398070	146	-30.91
CAediting_228905	chr2_188297554_+	ENSG00000055070.15	ENST00000492354	hsa-miR-561-3p	16396241	16396246	6mer	16396224	16396247	150	-16.35
CAediting_524911	chr7_5495852_-	ENSG00000055070.15	ENST00000492354	hsa-miR-589-3p	16397835	16397841	7mer-m8	16397819	16397842	140	-16.18

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000471507	hsa-miR-27a-3p	16395285	16395291	7mer-m8	16395271	16395292	151	-15.86
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000471507	hsa-miR-27a-3p	16395285	16395291	7mer-m8	16395271	16395292	151	-15.86
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000471507	hsa-miR-27a-3p	16395307	16395313	7mer-m8	16395293	16395314	149	-14.37
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000471507	hsa-miR-27a-3p	16395307	16395313	7mer-m8	16395293	16395314	149	-14.37
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000471507	hsa-miR-27a-3p	16395337	16395343	7mer-m8	16395325	16395344	153	-16.8
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000471507	hsa-miR-27a-3p	16395337	16395343	7mer-m8	16395325	16395344	153	-16.8
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000401089	hsa-miR-27a-3p	16395285	16395291	7mer-m8	16395271	16395292	151	-15.86
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000401089	hsa-miR-27a-3p	16395285	16395291	7mer-m8	16395271	16395292	151	-15.86
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000401089	hsa-miR-27a-3p	16395307	16395313	7mer-m8	16395293	16395314	149	-14.37
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000401089	hsa-miR-27a-3p	16395307	16395313	7mer-m8	16395293	16395314	149	-14.37
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000401089	hsa-miR-27a-3p	16395337	16395343	7mer-m8	16395325	16395344	153	-16.8
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000401089	hsa-miR-27a-3p	16395337	16395343	7mer-m8	16395325	16395344	153	-16.8
CAediting_1229414	chr17_67471546_+	ENSG00000055070.15	ENST00000401089	hsa-miR-548aa	16395674	16395680	7mer-1a	16395665	16395689	141	-16.89
CAediting_1229415	chr17_67471547_+	ENSG00000055070.15	ENST00000401089	hsa-miR-548aa	16395674	16395680	7mer-1a	16395665	16395689	141	-16.89
CAediting_748296	chr10_51299626_+	ENSG00000055070.15	ENST00000401089	hsa-miR-605-3p	16397561	16397568	8mer-1a	16397548	16397568	145	-12.07
CAediting_580943	chr7_100356700_+	ENSG00000055070.15	ENST00000401089	hsa-miR-6840-3p	16395182	16395188	7mer-m8	16395167	16395189	153	-25.22
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000492354	hsa-miR-27a-3p	16395285	16395291	7mer-m8	16395271	16395292	151	-15.86
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000492354	hsa-miR-27a-3p	16395285	16395291	7mer-m8	16395271	16395292	151	-15.86
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000492354	hsa-miR-27a-3p	16395307	16395313	7mer-m8	16395293	16395314	149	-14.37
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000492354	hsa-miR-27a-3p	16395307	16395313	7mer-m8	16395293	16395314	149	-14.37
CAediting_1306324	chr19_13836464_-	ENSG00000055070.15	ENST00000492354	hsa-miR-27a-3p	16395337	16395343	7mer-m8	16395325	16395344	153	-16.8
CAediting_1306323	chr19_13836462_-	ENSG00000055070.15	ENST00000492354	hsa-miR-27a-3p	16395337	16395343	7mer-m8	16395325	16395344	153	-16.8
CAediting_1229414	chr17_67471546_+	ENSG00000055070.15	ENST00000492354	hsa-miR-548aa	16395674	16395680	7mer-1a	16395665	16395689	141	-16.89
CAediting_1229415	chr17_67471547_+	ENSG00000055070.15	ENST00000492354	hsa-miR-548aa	16395674	16395680	7mer-1a	16395665	16395689	141	-16.89
CAediting_748296	chr10_51299626_+	ENSG00000055070.15	ENST00000492354	hsa-miR-605-3p	16397561	16397568	8mer-1a	16397548	16397568	145	-12.07
CAediting_580943	chr7_100356700_+	ENSG00000055070.15	ENST00000492354	hsa-miR-6840-3p	16395182	16395188	7mer-m8	16395167	16395189	153	-25.22

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SZRD1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SZRD1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for SZRD1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for SZRD1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SZRD1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SZRD1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene