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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

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Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: GIGYF2 (CAeditome ID:26058)

Gene summary for GIGYF2

check button Gene summary
Gene informationGene symbol

GIGYF2

Gene ID

26058

Gene nameGRB10 interacting GYF protein 2
SynonymsGYF2|PARK11|PERQ2|PERQ3|TNRC15
Cytomap

2q37.1

Type of geneprotein-coding
DescriptionGRB10-interacting GYF protein 2PERQ amino acid rich, with GYF domain 3PERQ amino acid-rich with GYF domain-containing protein 2Parkinson disease (autosomal recessive, early onset) 11trinucleotide repeat-containing gene 15 protein
Modification date20210518
UniProtAcc

Q6Y7W6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
GIGYF2

GO:0070064

GRB10-interacting GYF protein 2

20696395

GIGYF2

GO:0016441

GRB10-interacting GYF protein 2

27157137

GIGYF2

GO:0061157

GRB10-interacting GYF protein 2

27157137

GIGYF2

GO:0005768

GRB10-interacting GYF protein 2

20670374

GIGYF2

GO:0005783

GRB10-interacting GYF protein 2

20696395

GIGYF2

GO:0005794

GRB10-interacting GYF protein 2

20696395

GIGYF2

GO:0005829

GRB10-interacting GYF protein 2

0000052

GIGYF2

GO:0010494

GRB10-interacting GYF protein 2

20696395

GIGYF2

GO:0043204

GRB10-interacting GYF protein 2

20670374

GIGYF2

GO:1990635

GRB10-interacting GYF protein 2

20670374

GIGYF2

GO:0032991

GRB10-interacting GYF protein 2

20878056


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RNA A-to-I events for GIGYF2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000204120.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_248800(232701493, +), CAediting_248801(232701497, +), CAediting_248802(232701555, +), CAediting_248803(232701621, +), CAediting_248804(232701658, +), CAediting_248805(232701659, +), CAediting_248806(232701685, +), CAediting_248807(232701698, +), CAediting_248808(232701700, +), CAediting_248809(232701899, +), CAediting_248810(232701929, +), CAediting_248811(232701945, +), CAediting_248812(232702345, +), CAediting_248813(232703047, +), CAediting_248814(232703054, +), CAediting_248815(232704474, +), CAediting_248816(232704479, +), CAediting_248817(232704534, +), CAediting_248818(232704544, +), CAediting_248819(232704577, +), CAediting_248820(232704580, +), CAediting_248821(232704583, +), CAediting_248822(232704659, +), CAediting_248823(232705535, +), CAediting_248824(232705927, +), CAediting_248825(232705952, +), CAediting_248826(232706631, +), CAediting_248827(232706657, +), CAediting_248828(232706700, +), CAediting_248829(232706701, +), CAediting_248830(232706721, +), CAediting_248831(232706767, +), CAediting_248832(232706813, +), CAediting_248833(232706826, +), CAediting_248834(232706827, +), CAediting_248835(232706865, +), CAediting_248836(232706891, +), CAediting_248837(232708094, +), CAediting_248838(232708160, +), CAediting_248839(232708228, +), CAediting_248840(232708558, +), CAediting_248841(232708564, +), CAediting_248842(232708580, +), CAediting_248843(232708581, +), CAediting_248844(232708586, +), CAediting_248845(232708595, +), CAediting_248846(232708596, +), CAediting_248847(232708606, +), CAediting_248848(232708636, +), CAediting_248849(232708867, +), CAediting_248850(232708884, +), CAediting_248851(232708912, +), CAediting_248852(232708913, +), CAediting_248853(232708956, +), CAediting_248854(232708974, +), CAediting_248855(232709363, +), CAediting_248856(232709711, +), CAediting_248857(232710029, +), CAediting_248858(232710166, +), CAediting_248859(232710221, +), CAediting_248860(232710233, +), CAediting_248861(232710294, +), CAediting_248862(232710317, +), CAediting_248863(232710323, +), CAediting_248864(232710324, +), CAediting_248865(232713176, +), CAediting_248866(232717178, +), CAediting_248867(232717251, +), CAediting_248868(232718119, +), CAediting_248869(232718237, +), CAediting_248870(232724576, +), CAediting_248871(232724592, +), CAediting_248872(232724601, +), CAediting_248873(232724643, +), CAediting_248874(232724649, +), CAediting_248875(232724650, +), CAediting_248876(232724651, +), CAediting_248877(232724662, +), CAediting_248878(232724667, +), CAediting_248879(232724675, +), CAediting_248880(232724676, +), CAediting_248881(232724679, +), CAediting_248882(232724690, +), CAediting_248883(232724805, +), CAediting_248884(232724815, +), CAediting_248885(232726063, +), CAediting_248886(232726072, +), CAediting_248887(232726116, +), CAediting_248888(232726132, +), CAediting_248889(232726137, +), CAediting_248890(232726150, +), CAediting_248891(232726160, +), CAediting_248892(232726163, +), CAediting_248893(232726183, +), CAediting_248894(232726184, +), CAediting_248895(232726186, +), CAediting_248896(232726190, +), CAediting_248897(232726193, +), CAediting_248898(232726204, +), CAediting_248899(232726208, +), CAediting_248900(232726209, +), CAediting_248901(232726210, +), CAediting_248902(232726211, +), CAediting_248903(232726213, +), CAediting_248904(232726215, +), CAediting_248905(232726216, +), CAediting_248906(232726217, +), CAediting_248907(232726218, +), CAediting_248908(232726219, +), CAediting_248909(232726248, +), CAediting_248910(232726254, +), CAediting_248911(232726258, +), CAediting_248912(232726275, +), CAediting_248913(232726277, +), CAediting_248914(232726278, +), CAediting_248915(232726289, +), CAediting_248916(232726290, +), CAediting_248917(232726297, +), CAediting_248918(232726326, +), CAediting_248919(232726485, +), CAediting_248920(232726495, +), CAediting_248921(232727064, +), CAediting_248922(232727075, +), CAediting_248923(232727082, +), CAediting_248924(232727094, +), CAediting_248925(232727095, +), CAediting_248926(232727104, +), CAediting_248927(232727126, +), CAediting_248928(232727131, +), CAediting_248929(232727146, +), CAediting_248930(232727168, +), CAediting_248931(232730484, +), CAediting_248932(232730485, +), CAediting_248933(232730511, +), CAediting_248934(232730520, +), CAediting_248935(232730526, +), CAediting_248936(232730554, +), CAediting_248937(232732665, +), CAediting_248938(232732704, +), CAediting_248939(232732708, +), CAediting_248940(232732768, +), CAediting_248941(232732790, +), CAediting_248942(232732794, +), CAediting_248943(232732830, +), CAediting_248944(232733001, +), CAediting_248945(232733002, +), CAediting_248946(232733045, +), CAediting_248947(232733054, +), CAediting_248948(232733079, +), CAediting_248949(232733126, +), CAediting_248950(232733136, +), CAediting_248951(232733163, +), CAediting_248952(232733202, +), CAediting_248953(232733209, +), CAediting_248954(232734470, +), CAediting_248955(232734471, +), CAediting_248956(232734479, +), CAediting_248957(232738016, +), CAediting_248958(232738056, +), CAediting_248959(232738114, +), CAediting_248960(232739144, +), CAediting_248961(232739198, +), CAediting_248962(232739199, +), CAediting_248963(232739200, +), CAediting_248964(232739201, +), CAediting_248965(232739203, +), CAediting_248966(232739207, +), CAediting_248967(232739237, +), CAediting_248968(232739238, +), CAediting_248969(232739251, +), CAediting_248970(232739264, +), CAediting_248971(232739283, +), CAediting_248972(232739293, +), CAediting_248973(232739529, +), CAediting_248974(232739582, +), CAediting_248975(232739586, +), CAediting_248976(232739588, +), CAediting_248977(232739594, +), CAediting_248978(232739891, +), CAediting_248979(232739967, +), CAediting_248980(232739998, +), CAediting_248981(232740007, +), CAediting_248982(232740024, +), CAediting_248983(232740039, +), CAediting_248984(232741624, +), CAediting_248985(232742291, +), CAediting_248986(232742382, +), CAediting_248987(232742383, +), CAediting_248988(232742385, +), CAediting_248989(232742398, +), CAediting_248990(232743973, +), CAediting_248991(232744671, +), CAediting_248992(232744808, +), CAediting_248993(232750883, +), CAediting_248994(232750957, +), CAediting_248995(232753223, +), CAediting_248996(232753224, +), CAediting_248997(232753892, +), CAediting_248998(232753904, +), CAediting_248999(232753950, +), CAediting_249000(232753993, +), CAediting_249001(232753999, +), CAediting_249002(232754002, +), CAediting_249003(232754004, +), CAediting_249004(232754005, +), CAediting_249005(232754008, +), CAediting_249006(232754018, +), CAediting_249007(232754026, +), CAediting_249008(232754044, +), CAediting_249009(232754054, +), CAediting_249010(232754058, +), CAediting_249011(232754086, +), CAediting_249012(232754110, +), CAediting_249013(232754153, +), CAediting_249014(232782244, +), CAediting_249015(232782272, +), CAediting_249016(232784235, +), CAediting_249017(232784274, +), CAediting_249018(232797727, +), CAediting_249019(232801004, +), CAediting_249020(232807438, +), CAediting_249021(232807448, +), CAediting_249022(232809102, +), CAediting_249023(232812858, +), CAediting_249024(232812880, +), CAediting_249025(232812897, +), CAediting_249026(232812916, +), CAediting_249027(232812926, +), CAediting_249028(232812942, +), CAediting_249029(232812962, +), CAediting_249030(232814154, +), CAediting_249031(232820480, +), CAediting_249032(232823457, +), CAediting_249033(232828484, +), CAediting_249034(232828552, +), CAediting_249035(232828553, +), CAediting_249036(232828582, +), CAediting_249037(232828588, +), CAediting_249038(232828595, +), CAediting_249039(232830011, +), CAediting_249040(232830126, +), CAediting_249041(232830167, +), CAediting_249042(232830203, +), CAediting_249043(232836459, +), CAediting_249044(232836481, +), CAediting_249045(232848424, +), CAediting_249046(232848511, +), CAediting_249047(232851092, +), CAediting_249048(232851178, +), CAediting_249049(232851196, +), CAediting_249050(232854243, +), CAediting_249051(232855187, +), CAediting_249052(232855204, +), CAediting_249053(232856412, +), CAediting_249054(232856451, +), CAediting_249055(232856573, +), CAediting_249056(232856647, +), CAediting_249057(232860206, +), CAediting_249058(232860232, +),

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RNA editing positional annotations for GIGYF2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_248800chr2_232701493_+ncRNA_intronic
CAediting_248801chr2_232701497_+ncRNA_intronic
CAediting_248802chr2_232701555_+ncRNA_intronic
CAediting_248803chr2_232701621_+ncRNA_intronic
CAediting_248804chr2_232701658_+ncRNA_intronic
CAediting_248805chr2_232701659_+ncRNA_intronic
CAediting_248806chr2_232701685_+ncRNA_intronic
CAediting_248807chr2_232701698_+ncRNA_intronic
CAediting_248808chr2_232701700_+ncRNA_intronic
CAediting_248809chr2_232701899_+ncRNA_intronic
CAediting_248810chr2_232701929_+ncRNA_intronic
CAediting_248811chr2_232701945_+ncRNA_intronic
CAediting_248812chr2_232702345_+ncRNA_intronic
CAediting_248813chr2_232703047_+ncRNA_intronic
CAediting_248814chr2_232703054_+ncRNA_intronic
CAediting_248815chr2_232704474_+ncRNA_intronic
CAediting_248816chr2_232704479_+ncRNA_intronic
CAediting_248817chr2_232704534_+ncRNA_intronic
CAediting_248818chr2_232704544_+ncRNA_intronic
CAediting_248819chr2_232704577_+ncRNA_intronic
CAediting_248820chr2_232704580_+ncRNA_intronic
CAediting_248821chr2_232704583_+ncRNA_intronic
CAediting_248822chr2_232704659_+ncRNA_intronic
CAediting_248823chr2_232705535_+ncRNA_exonic
CAediting_248824chr2_232705927_+ncRNA_exonic
CAediting_248825chr2_232705952_+ncRNA_intronic
CAediting_248826chr2_232706631_+ncRNA_intronic
CAediting_248827chr2_232706657_+ncRNA_intronic
CAediting_248828chr2_232706700_+ncRNA_intronic
CAediting_248829chr2_232706701_+ncRNA_intronic
CAediting_248830chr2_232706721_+ncRNA_intronic
CAediting_248831chr2_232706767_+ncRNA_intronic
CAediting_248832chr2_232706813_+ncRNA_intronic
CAediting_248833chr2_232706826_+ncRNA_intronic
CAediting_248834chr2_232706827_+ncRNA_intronic
CAediting_248835chr2_232706865_+ncRNA_intronic
CAediting_248836chr2_232706891_+ncRNA_intronic
CAediting_248837chr2_232708094_+ncRNA_intronic
CAediting_248838chr2_232708160_+ncRNA_intronic
CAediting_248839chr2_232708228_+ncRNA_intronic
CAediting_248840chr2_232708558_+ncRNA_intronic
CAediting_248841chr2_232708564_+ncRNA_intronic
CAediting_248842chr2_232708580_+ncRNA_intronic
CAediting_248843chr2_232708581_+ncRNA_intronic
CAediting_248844chr2_232708586_+ncRNA_intronic
CAediting_248845chr2_232708595_+ncRNA_intronic
CAediting_248846chr2_232708596_+ncRNA_intronic
CAediting_248847chr2_232708606_+ncRNA_intronic
CAediting_248848chr2_232708636_+ncRNA_intronic
CAediting_248849chr2_232708867_+ncRNA_intronic
CAediting_248850chr2_232708884_+ncRNA_intronic
CAediting_248851chr2_232708912_+ncRNA_intronic
CAediting_248852chr2_232708913_+ncRNA_intronic
CAediting_248853chr2_232708956_+ncRNA_intronic
CAediting_248854chr2_232708974_+ncRNA_intronic
CAediting_248855chr2_232709363_+ncRNA_intronic
CAediting_248856chr2_232709711_+ncRNA_intronic
CAediting_248857chr2_232710029_+ncRNA_intronic
CAediting_248858chr2_232710166_+ncRNA_intronic
CAediting_248859chr2_232710221_+ncRNA_intronic
CAediting_248860chr2_232710233_+ncRNA_intronic
CAediting_248861chr2_232710294_+ncRNA_intronic
CAediting_248862chr2_232710317_+ncRNA_intronic
CAediting_248863chr2_232710323_+ncRNA_intronic
CAediting_248864chr2_232710324_+ncRNA_intronic
CAediting_248865chr2_232713176_+ncRNA_intronic
CAediting_248866chr2_232717178_+ncRNA_intronic
CAediting_248867chr2_232717251_+ncRNA_intronic
CAediting_248868chr2_232718119_+ncRNA_intronic
CAediting_248869chr2_232718237_+ncRNA_intronic
CAediting_248870chr2_232724576_+ncRNA_exonic
CAediting_248871chr2_232724592_+ncRNA_exonic
CAediting_248872chr2_232724601_+ncRNA_exonic
CAediting_248873chr2_232724643_+ncRNA_exonic
CAediting_248874chr2_232724649_+ncRNA_exonic
CAediting_248875chr2_232724650_+ncRNA_exonic
CAediting_248876chr2_232724651_+ncRNA_exonic
CAediting_248877chr2_232724662_+ncRNA_exonic
CAediting_248878chr2_232724667_+ncRNA_exonic
CAediting_248879chr2_232724675_+ncRNA_exonic
CAediting_248880chr2_232724676_+ncRNA_exonic
CAediting_248881chr2_232724679_+ncRNA_exonic
CAediting_248882chr2_232724690_+ncRNA_exonic
CAediting_248883chr2_232724805_+ncRNA_intronic
CAediting_248884chr2_232724815_+ncRNA_intronic
CAediting_248885chr2_232726063_+ncRNA_intronic
CAediting_248886chr2_232726072_+ncRNA_intronic
CAediting_248887chr2_232726116_+ncRNA_intronic
CAediting_248888chr2_232726132_+ncRNA_intronic
CAediting_248889chr2_232726137_+ncRNA_intronic
CAediting_248890chr2_232726150_+ncRNA_intronic
CAediting_248891chr2_232726160_+ncRNA_intronic
CAediting_248892chr2_232726163_+ncRNA_intronic
CAediting_248893chr2_232726183_+ncRNA_intronic
CAediting_248894chr2_232726184_+ncRNA_intronic
CAediting_248895chr2_232726186_+ncRNA_intronic
CAediting_248896chr2_232726190_+ncRNA_intronic
CAediting_248897chr2_232726193_+ncRNA_intronic
CAediting_248898chr2_232726204_+ncRNA_intronic
CAediting_248899chr2_232726208_+ncRNA_intronic
CAediting_248900chr2_232726209_+ncRNA_intronic
CAediting_248901chr2_232726210_+ncRNA_intronic
CAediting_248902chr2_232726211_+ncRNA_intronic
CAediting_248903chr2_232726213_+ncRNA_intronic
CAediting_248904chr2_232726215_+ncRNA_intronic
CAediting_248905chr2_232726216_+ncRNA_intronic
CAediting_248906chr2_232726217_+ncRNA_intronic
CAediting_248907chr2_232726218_+ncRNA_intronic
CAediting_248908chr2_232726219_+ncRNA_intronic
CAediting_248909chr2_232726248_+ncRNA_intronic
CAediting_248910chr2_232726254_+ncRNA_intronic
CAediting_248911chr2_232726258_+ncRNA_intronic
CAediting_248912chr2_232726275_+ncRNA_intronic
CAediting_248913chr2_232726277_+ncRNA_intronic
CAediting_248914chr2_232726278_+ncRNA_intronic
CAediting_248915chr2_232726289_+ncRNA_intronic
CAediting_248916chr2_232726290_+ncRNA_intronic
CAediting_248917chr2_232726297_+ncRNA_intronic
CAediting_248918chr2_232726326_+ncRNA_intronic
CAediting_248919chr2_232726485_+ncRNA_intronic
CAediting_248920chr2_232726495_+ncRNA_intronic
CAediting_248921chr2_232727064_+ncRNA_intronic
CAediting_248922chr2_232727075_+ncRNA_intronic
CAediting_248923chr2_232727082_+ncRNA_intronic
CAediting_248924chr2_232727094_+ncRNA_intronic
CAediting_248925chr2_232727095_+ncRNA_intronic
CAediting_248926chr2_232727104_+ncRNA_intronic
CAediting_248927chr2_232727126_+ncRNA_intronic
CAediting_248928chr2_232727131_+ncRNA_intronic
CAediting_248929chr2_232727146_+ncRNA_intronic
CAediting_248930chr2_232727168_+ncRNA_intronic
CAediting_248931chr2_232730484_+ncRNA_intronic
CAediting_248932chr2_232730485_+ncRNA_intronic
CAediting_248933chr2_232730511_+ncRNA_intronic
CAediting_248934chr2_232730520_+ncRNA_intronic
CAediting_248935chr2_232730526_+ncRNA_intronic
CAediting_248936chr2_232730554_+ncRNA_intronic
CAediting_248937chr2_232732665_+ncRNA_intronic
CAediting_248938chr2_232732704_+ncRNA_intronic
CAediting_248939chr2_232732708_+ncRNA_intronic
CAediting_248940chr2_232732768_+ncRNA_intronic
CAediting_248941chr2_232732790_+ncRNA_intronic
CAediting_248942chr2_232732794_+ncRNA_intronic
CAediting_248943chr2_232732830_+ncRNA_intronic
CAediting_248944chr2_232733001_+ncRNA_intronic
CAediting_248945chr2_232733002_+ncRNA_intronic
CAediting_248946chr2_232733045_+ncRNA_intronic
CAediting_248947chr2_232733054_+ncRNA_intronic
CAediting_248948chr2_232733079_+ncRNA_intronic
CAediting_248949chr2_232733126_+ncRNA_intronic
CAediting_248950chr2_232733136_+ncRNA_intronic
CAediting_248951chr2_232733163_+ncRNA_intronic
CAediting_248952chr2_232733202_+ncRNA_intronic
CAediting_248953chr2_232733209_+ncRNA_intronic
CAediting_248954chr2_232734470_+ncRNA_exonic
CAediting_248955chr2_232734471_+ncRNA_exonic
CAediting_248956chr2_232734479_+ncRNA_exonic
CAediting_248957chr2_232738016_+ncRNA_intronic
CAediting_248958chr2_232738056_+ncRNA_intronic
CAediting_248959chr2_232738114_+ncRNA_intronic
CAediting_248960chr2_232739144_+ncRNA_intronic
CAediting_248961chr2_232739198_+ncRNA_intronic
CAediting_248962chr2_232739199_+ncRNA_intronic
CAediting_248963chr2_232739200_+ncRNA_intronic
CAediting_248964chr2_232739201_+ncRNA_intronic
CAediting_248965chr2_232739203_+ncRNA_intronic
CAediting_248966chr2_232739207_+ncRNA_intronic
CAediting_248967chr2_232739237_+ncRNA_intronic
CAediting_248968chr2_232739238_+ncRNA_intronic
CAediting_248969chr2_232739251_+ncRNA_intronic
CAediting_248970chr2_232739264_+ncRNA_intronic
CAediting_248971chr2_232739283_+ncRNA_intronic
CAediting_248972chr2_232739293_+ncRNA_intronic
CAediting_248973chr2_232739529_+ncRNA_intronic
CAediting_248974chr2_232739582_+ncRNA_intronic
CAediting_248975chr2_232739586_+ncRNA_intronic
CAediting_248976chr2_232739588_+ncRNA_intronic
CAediting_248977chr2_232739594_+ncRNA_intronic
CAediting_248978chr2_232739891_+ncRNA_intronic
CAediting_248979chr2_232739967_+ncRNA_intronic
CAediting_248980chr2_232739998_+ncRNA_intronic
CAediting_248981chr2_232740007_+ncRNA_intronic
CAediting_248982chr2_232740024_+ncRNA_intronic
CAediting_248983chr2_232740039_+ncRNA_intronic
CAediting_248984chr2_232741624_+ncRNA_intronic
CAediting_248985chr2_232742291_+ncRNA_intronic
CAediting_248986chr2_232742382_+ncRNA_intronic
CAediting_248987chr2_232742383_+ncRNA_intronic
CAediting_248988chr2_232742385_+ncRNA_intronic
CAediting_248989chr2_232742398_+ncRNA_intronic
CAediting_248990chr2_232743973_+ncRNA_intronic
CAediting_248991chr2_232744671_+ncRNA_intronic
CAediting_248992chr2_232744808_+ncRNA_intronic
CAediting_248993chr2_232750883_+ncRNA_intronic
CAediting_248994chr2_232750957_+ncRNA_intronic
CAediting_248995chr2_232753223_+ncRNA_intronic
CAediting_248996chr2_232753224_+ncRNA_intronic
CAediting_248997chr2_232753892_+ncRNA_intronic
CAediting_248998chr2_232753904_+ncRNA_intronic
CAediting_248999chr2_232753950_+ncRNA_intronic
CAediting_249000chr2_232753993_+ncRNA_intronic
CAediting_249001chr2_232753999_+ncRNA_intronic
CAediting_249002chr2_232754002_+ncRNA_intronic
CAediting_249003chr2_232754004_+ncRNA_intronic
CAediting_249004chr2_232754005_+ncRNA_intronic
CAediting_249005chr2_232754008_+ncRNA_intronic
CAediting_249006chr2_232754018_+ncRNA_intronic
CAediting_249007chr2_232754026_+ncRNA_intronic
CAediting_249008chr2_232754044_+ncRNA_intronic
CAediting_249009chr2_232754054_+ncRNA_intronic
CAediting_249010chr2_232754058_+ncRNA_intronic
CAediting_249011chr2_232754086_+ncRNA_intronic
CAediting_249012chr2_232754110_+ncRNA_intronic
CAediting_249013chr2_232754153_+ncRNA_intronic
CAediting_249014chr2_232782244_+intronic
CAediting_249015chr2_232782272_+intronic
CAediting_249016chr2_232784235_+intronic
CAediting_249017chr2_232784274_+intronic
CAediting_249018chr2_232797727_+intronic
CAediting_249019chr2_232801004_+intronic
CAediting_249020chr2_232807438_+ncRNA_intronic
CAediting_249021chr2_232807448_+ncRNA_intronic
CAediting_249022chr2_232809102_+ncRNA_intronic
CAediting_249023chr2_232812858_+ncRNA_intronic
CAediting_249024chr2_232812880_+ncRNA_intronic
CAediting_249025chr2_232812897_+ncRNA_intronic
CAediting_249026chr2_232812916_+ncRNA_intronic
CAediting_249027chr2_232812926_+ncRNA_intronic
CAediting_249028chr2_232812942_+ncRNA_intronic
CAediting_249029chr2_232812962_+ncRNA_intronic
CAediting_249030chr2_232814154_+ncRNA_intronic
CAediting_249031chr2_232820480_+ncRNA_intronic
CAediting_249032chr2_232823457_+ncRNA_intronic
CAediting_249033chr2_232828484_+ncRNA_intronic
CAediting_249034chr2_232828552_+ncRNA_intronic
CAediting_249035chr2_232828553_+ncRNA_intronic
CAediting_249036chr2_232828582_+ncRNA_intronic
CAediting_249037chr2_232828588_+ncRNA_intronic
CAediting_249038chr2_232828595_+ncRNA_intronic
CAediting_249039chr2_232830011_+ncRNA_intronic
CAediting_249040chr2_232830126_+ncRNA_intronic
CAediting_249041chr2_232830167_+ncRNA_intronic
CAediting_249042chr2_232830203_+ncRNA_intronic
CAediting_249043chr2_232836459_+ncRNA_intronic
CAediting_249044chr2_232836481_+ncRNA_intronic
CAediting_249045chr2_232848424_+ncRNA_intronic
CAediting_249046chr2_232848511_+ncRNA_intronic
CAediting_249047chr2_232851092_+ncRNA_intronic
CAediting_249048chr2_232851178_+ncRNA_intronic
CAediting_249049chr2_232851196_+ncRNA_intronic
CAediting_249050chr2_232854243_+ncRNA_intronic
CAediting_249051chr2_232855187_+ncRNA_intronic
CAediting_249052chr2_232855204_+ncRNA_intronic
CAediting_249053chr2_232856412_+ncRNA_intronic
CAediting_249054chr2_232856451_+ncRNA_intronic
CAediting_249055chr2_232856573_+ncRNA_intronic
CAediting_249056chr2_232856647_+ncRNA_intronic
CAediting_249057chr2_232860206_+UTR3
CAediting_249058chr2_232860232_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_248800chr2_232701493_+SINEAluAluJb
CAediting_248801chr2_232701497_+SINEAluAluJb
CAediting_248802chr2_232701555_+SINEAluAluJb
CAediting_248803chr2_232701621_+SINEAluAluJb
CAediting_248804chr2_232701658_+SINEAluAluJb
CAediting_248805chr2_232701659_+SINEAluAluJb
CAediting_248806chr2_232701685_+SINEAluAluJb
CAediting_248807chr2_232701698_+SINEAluAluJb
CAediting_248808chr2_232701700_+SINEAluAluJb
CAediting_248809chr2_232701899_+SINEAluAluJr
CAediting_248810chr2_232701929_+SINEAluAluJr
CAediting_248811chr2_232701945_+SINEAluAluJr
CAediting_248812chr2_232702345_+SINEAluAluSz6
CAediting_248813chr2_232703047_+SINEAluAluJb
CAediting_248814chr2_232703054_+SINEAluAluJb
CAediting_248815chr2_232704474_+SINEAluAluSz6
CAediting_248816chr2_232704479_+SINEAluAluSz6
CAediting_248817chr2_232704534_+SINEAluAluSz6
CAediting_248818chr2_232704544_+SINEAluAluSz6
CAediting_248819chr2_232704577_+SINEAluAluSz6
CAediting_248820chr2_232704580_+SINEAluAluSz6
CAediting_248821chr2_232704583_+SINEAluAluSz6
CAediting_248822chr2_232704659_+SINEAluAluSz6
CAediting_248823chr2_232705535_+SINEAluAluSp
CAediting_248824chr2_232705927_+SINEAluAluSq2
CAediting_248825chr2_232705952_+SINEAluAluSq2
CAediting_248826chr2_232706631_+SINEAluAluSz
CAediting_248827chr2_232706657_+SINEAluAluSz
CAediting_248828chr2_232706700_+SINEAluAluSz
CAediting_248829chr2_232706701_+SINEAluAluSz
CAediting_248830chr2_232706721_+SINEAluAluSz
CAediting_248831chr2_232706767_+SINEAluAluSz
CAediting_248832chr2_232706813_+SINEAluAluJb
CAediting_248833chr2_232706826_+SINEAluAluJb
CAediting_248834chr2_232706827_+SINEAluAluJb
CAediting_248835chr2_232706865_+SINEAluAluJb
CAediting_248836chr2_232706891_+SINEAluAluJb
CAediting_248837chr2_232708094_+SINEAluAluJb
CAediting_248838chr2_232708160_+SINEAluAluJb
CAediting_248839chr2_232708228_+SINEAluAluJb
CAediting_248840chr2_232708558_+SINEAluAluJo
CAediting_248841chr2_232708564_+SINEAluAluJo
CAediting_248842chr2_232708580_+SINEAluAluJo
CAediting_248843chr2_232708581_+SINEAluAluJo
CAediting_248844chr2_232708586_+SINEAluAluJo
CAediting_248845chr2_232708595_+SINEAluAluJo
CAediting_248846chr2_232708596_+SINEAluAluJo
CAediting_248847chr2_232708606_+SINEAluAluJo
CAediting_248848chr2_232708636_+SINEAluAluJo
CAediting_248849chr2_232708867_+SINEAluAluSx1
CAediting_248850chr2_232708884_+SINEAluAluSx1
CAediting_248851chr2_232708912_+SINEAluAluSx1
CAediting_248852chr2_232708913_+SINEAluAluSx1
CAediting_248853chr2_232708956_+SINEAluAluSx1
CAediting_248854chr2_232708974_+SINEAluAluSx1
CAediting_248855chr2_232709363_+SINEAluAluJo
CAediting_248856chr2_232709711_+SINEAluAluSg
CAediting_248857chr2_232710029_+SINEAluAluY
CAediting_248858chr2_232710166_+SINEAluAluY
CAediting_248859chr2_232710221_+SINEAluAluY
CAediting_248860chr2_232710233_+SINEAluAluY
CAediting_248861chr2_232710294_+SINEAluFLAM_C
CAediting_248862chr2_232710317_+SINEAluFLAM_C
CAediting_248863chr2_232710323_+SINEAluFLAM_C
CAediting_248864chr2_232710324_+SINEAluFLAM_C
CAediting_248865chr2_232713176_+SINEAluAluSx1
CAediting_248866chr2_232717178_+SINEAluAluJr4
CAediting_248867chr2_232717251_+SINEAluAluJr4
CAediting_248868chr2_232718119_+SINEAluAluSx1
CAediting_248869chr2_232718237_+SINEAluAluSx1
CAediting_248870chr2_232724576_+SINEAluAluJr
CAediting_248871chr2_232724592_+SINEAluAluJr
CAediting_248872chr2_232724601_+SINEAluAluJr
CAediting_248873chr2_232724643_+SINEAluAluJr
CAediting_248874chr2_232724649_+SINEAluAluJr
CAediting_248875chr2_232724650_+SINEAluAluJr
CAediting_248876chr2_232724651_+SINEAluAluJr
CAediting_248877chr2_232724662_+SINEAluAluJr
CAediting_248878chr2_232724667_+SINEAluAluJr
CAediting_248879chr2_232724675_+SINEAluAluJr
CAediting_248880chr2_232724676_+SINEAluAluJr
CAediting_248881chr2_232724679_+SINEAluAluJr
CAediting_248882chr2_232724690_+SINEAluAluJr
CAediting_248883chr2_232724805_+SINEAluAluJr
CAediting_248884chr2_232724815_+SINEAluAluJr
CAediting_248887chr2_232726116_+SINEAluAluSx1
CAediting_248888chr2_232726132_+SINEAluAluSx1
CAediting_248889chr2_232726137_+SINEAluAluSx1
CAediting_248890chr2_232726150_+SINEAluAluSx1
CAediting_248891chr2_232726160_+SINEAluAluSx1
CAediting_248892chr2_232726163_+SINEAluAluSx1
CAediting_248893chr2_232726183_+SINEAluAluSx1
CAediting_248894chr2_232726184_+SINEAluAluSx1
CAediting_248895chr2_232726186_+SINEAluAluSx1
CAediting_248896chr2_232726190_+SINEAluAluSx1
CAediting_248897chr2_232726193_+SINEAluAluSx1
CAediting_248898chr2_232726204_+SINEAluAluSx1
CAediting_248899chr2_232726208_+SINEAluAluSx1
CAediting_248900chr2_232726209_+SINEAluAluSx1
CAediting_248901chr2_232726210_+SINEAluAluSx1
CAediting_248902chr2_232726211_+SINEAluAluSx1
CAediting_248903chr2_232726213_+SINEAluAluSx1
CAediting_248904chr2_232726215_+SINEAluAluSx1
CAediting_248905chr2_232726216_+SINEAluAluSx1
CAediting_248906chr2_232726217_+SINEAluAluSx1
CAediting_248907chr2_232726218_+SINEAluAluSx1
CAediting_248908chr2_232726219_+SINEAluAluSx1
CAediting_248909chr2_232726248_+SINEAluAluSx1
CAediting_248910chr2_232726254_+SINEAluAluSx1
CAediting_248911chr2_232726258_+SINEAluAluSx1
CAediting_248912chr2_232726275_+SINEAluAluSx1
CAediting_248913chr2_232726277_+SINEAluAluSx1
CAediting_248914chr2_232726278_+SINEAluAluSx1
CAediting_248915chr2_232726289_+SINEAluAluSx1
CAediting_248916chr2_232726290_+SINEAluAluSx1
CAediting_248917chr2_232726297_+SINEAluAluSx1
CAediting_248918chr2_232726326_+SINEAluAluSx1
CAediting_248919chr2_232726485_+SINEAluAluJb
CAediting_248920chr2_232726495_+SINEAluAluJb
CAediting_248921chr2_232727064_+SINEAluAluSz6
CAediting_248922chr2_232727075_+SINEAluAluSz6
CAediting_248923chr2_232727082_+SINEAluAluSz6
CAediting_248924chr2_232727094_+SINEAluAluSz6
CAediting_248925chr2_232727095_+SINEAluAluSz6
CAediting_248926chr2_232727104_+SINEAluAluSz6
CAediting_248927chr2_232727126_+SINEAluAluSz6
CAediting_248928chr2_232727131_+SINEAluAluSz6
CAediting_248929chr2_232727146_+SINEAluAluSz6
CAediting_248930chr2_232727168_+SINEAluAluSz6
CAediting_248931chr2_232730484_+SINEAluAluSz
CAediting_248932chr2_232730485_+SINEAluAluSz
CAediting_248933chr2_232730511_+SINEAluAluSz
CAediting_248934chr2_232730520_+SINEAluAluSz
CAediting_248935chr2_232730526_+SINEAluAluSz
CAediting_248936chr2_232730554_+SINEAluAluSz
CAediting_248937chr2_232732665_+SINEAluAluJb
CAediting_248938chr2_232732704_+SINEAluAluJb
CAediting_248939chr2_232732708_+SINEAluAluJb
CAediting_248940chr2_232732768_+SINEAluAluJb
CAediting_248941chr2_232732790_+SINEAluAluJb
CAediting_248942chr2_232732794_+SINEAluAluJb
CAediting_248943chr2_232732830_+SINEAluAluJb
CAediting_248944chr2_232733001_+SINEAluAluY
CAediting_248945chr2_232733002_+SINEAluAluY
CAediting_248946chr2_232733045_+SINEAluAluY
CAediting_248947chr2_232733054_+SINEAluAluY
CAediting_248948chr2_232733079_+SINEAluAluY
CAediting_248949chr2_232733126_+SINEAluAluY
CAediting_248950chr2_232733136_+SINEAluAluY
CAediting_248951chr2_232733163_+SINEAluAluY
CAediting_248952chr2_232733202_+SINEAluAluY
CAediting_248953chr2_232733209_+SINEAluAluY
CAediting_248954chr2_232734470_+SINEAluAluJr
CAediting_248955chr2_232734471_+SINEAluAluJr
CAediting_248956chr2_232734479_+SINEAluAluJr
CAediting_248957chr2_232738016_+SINEAluAluSx1
CAediting_248958chr2_232738056_+SINEAluAluSx1
CAediting_248959chr2_232738114_+SINEAluAluSx1
CAediting_248960chr2_232739144_+SINEAluAluSq2
CAediting_248961chr2_232739198_+SINEAluAluSq2
CAediting_248962chr2_232739199_+SINEAluAluSq2
CAediting_248963chr2_232739200_+SINEAluAluSq2
CAediting_248964chr2_232739201_+SINEAluAluSq2
CAediting_248965chr2_232739203_+SINEAluAluSq2
CAediting_248966chr2_232739207_+SINEAluAluSq2
CAediting_248967chr2_232739237_+SINEAluAluSq2
CAediting_248968chr2_232739238_+SINEAluAluSq2
CAediting_248969chr2_232739251_+SINEAluAluSq2
CAediting_248970chr2_232739264_+SINEAluAluSq2
CAediting_248971chr2_232739283_+SINEAluAluSq2
CAediting_248972chr2_232739293_+SINEAluAluSq2
CAediting_248973chr2_232739529_+SINEAluAluJb
CAediting_248974chr2_232739582_+SINEAluAluJb
CAediting_248975chr2_232739586_+SINEAluAluJb
CAediting_248976chr2_232739588_+SINEAluAluJb
CAediting_248977chr2_232739594_+SINEAluAluJb
CAediting_248978chr2_232739891_+SINEAluAluSz
CAediting_248979chr2_232739967_+SINEAluAluSz
CAediting_248980chr2_232739998_+SINEAluAluSz
CAediting_248981chr2_232740007_+SINEAluAluSz
CAediting_248982chr2_232740024_+SINEAluAluSz
CAediting_248983chr2_232740039_+SINEAluAluSz
CAediting_248984chr2_232741624_+SINEAluAluSz
CAediting_248985chr2_232742291_+SINEAluAluSx
CAediting_248986chr2_232742382_+SINEAluAluSx
CAediting_248987chr2_232742383_+SINEAluAluSx
CAediting_248988chr2_232742385_+SINEAluAluSx
CAediting_248989chr2_232742398_+SINEAluAluSx
CAediting_248990chr2_232743973_+SINEAluAluJr
CAediting_248991chr2_232744671_+SINEAluAluJb
CAediting_248992chr2_232744808_+SINEAluAluJb
CAediting_248993chr2_232750883_+SINEAluAluJr
CAediting_248994chr2_232750957_+SINEAluAluJr
CAediting_248995chr2_232753223_+SINEAluAluSx1
CAediting_248996chr2_232753224_+SINEAluAluSx1
CAediting_248997chr2_232753892_+SINEAluAluSc8
CAediting_248998chr2_232753904_+SINEAluAluSc8
CAediting_248999chr2_232753950_+SINEAluAluSc8
CAediting_249000chr2_232753993_+SINEAluAluSc8
CAediting_249001chr2_232753999_+SINEAluAluSc8
CAediting_249002chr2_232754002_+SINEAluAluSc8
CAediting_249003chr2_232754004_+SINEAluAluSc8
CAediting_249004chr2_232754005_+SINEAluAluSc8
CAediting_249005chr2_232754008_+SINEAluAluSc8
CAediting_249006chr2_232754018_+SINEAluAluSc8
CAediting_249007chr2_232754026_+SINEAluAluSc8
CAediting_249008chr2_232754044_+SINEAluAluSc8
CAediting_249009chr2_232754054_+SINEAluAluSc8
CAediting_249010chr2_232754058_+SINEAluAluSc8
CAediting_249011chr2_232754086_+SINEAluAluSc8
CAediting_249012chr2_232754110_+SINEAluAluSc8
CAediting_249013chr2_232754153_+SINEAluAluSc8
CAediting_249015chr2_232782272_+SINEAluAluJb
CAediting_249016chr2_232784235_+SINEAluAluJr
CAediting_249017chr2_232784274_+SINEAluAluJr
CAediting_249018chr2_232797727_+SINEAluAluSz6
CAediting_249019chr2_232801004_+SINEAluAluSz6
CAediting_249020chr2_232807438_+SINEAluAluJo
CAediting_249021chr2_232807448_+SINEAluAluJo
CAediting_249022chr2_232809102_+SINEAluAluSg
CAediting_249023chr2_232812858_+SINEAluAluJr
CAediting_249024chr2_232812880_+SINEAluAluJr
CAediting_249025chr2_232812897_+SINEAluAluJr
CAediting_249026chr2_232812916_+SINEAluAluJr
CAediting_249027chr2_232812926_+SINEAluAluJr
CAediting_249028chr2_232812942_+SINEAluAluJr
CAediting_249029chr2_232812962_+SINEAluAluJr
CAediting_249030chr2_232814154_+SINEAluAluSx1
CAediting_249031chr2_232820480_+SINEAluAluY
CAediting_249032chr2_232823457_+SINEAluAluJr
CAediting_249033chr2_232828484_+SINEAluAluJr
CAediting_249034chr2_232828552_+SINEAluAluJr
CAediting_249035chr2_232828553_+SINEAluAluJr
CAediting_249036chr2_232828582_+SINEAluAluJr
CAediting_249037chr2_232828588_+SINEAluAluJr
CAediting_249038chr2_232828595_+SINEAluAluJr
CAediting_249039chr2_232830011_+SINEAluAluJr
CAediting_249040chr2_232830126_+SINEAluAluJr
CAediting_249041chr2_232830167_+SINEAluAluJr
CAediting_249042chr2_232830203_+SINEAluAluJr
CAediting_249043chr2_232836459_+SINEAluAluJb
CAediting_249044chr2_232836481_+SINEAluAluJb
CAediting_249045chr2_232848424_+SINEAluAluSg7
CAediting_249046chr2_232848511_+SINEAluAluSg7
CAediting_249047chr2_232851092_+SINEAluAluJr
CAediting_249048chr2_232851178_+SINEAluAluJr
CAediting_249049chr2_232851196_+SINEAluAluJr
CAediting_249050chr2_232854243_+SINEAluAluJb
CAediting_249051chr2_232855187_+SINEAluAluSz6
CAediting_249052chr2_232855204_+SINEAluAluSz6
CAediting_249053chr2_232856412_+SINEAluAluSz
CAediting_249054chr2_232856451_+SINEAluAluSz
CAediting_249055chr2_232856573_+SINEAluAluSz
CAediting_249056chr2_232856647_+SINEAluAluSz
CAediting_249057chr2_232860206_+SINEAluFLAM_A
CAediting_249058chr2_232860232_+SINEAluFLAM_A

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RNA A-to-I editing events in the alternative splicing sites for GIGYF2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_248870chr2_232724576_+232724555:2327245773SS2+0iATTTTTTTTTTCCTTTTAGAGAC-4.91ATTTTTTTTTTCCTTTTAGAGGC-5.05
MEX_1CAediting_248870chr2_232724576_+232724555:2327245773SS2+0iATTTTTTTTTTCCTTTTAGAGAC-4.91ATTTTTTTTTTCCTTTTAGAGGC-5.05
MEX_2CAediting_248870chr2_232724576_+232724555:2327245773SS2+0iATTTTTTTTTTCCTTTTAGAGAC-4.91ATTTTTTTTTTCCTTTTAGAGGC-5.05
ESCAediting_248871chr2_232724592_+232724577:2327245993SS0+5iCTGTCTCGCTCTGTCACCCAGGC-5.97CTGTCTCGCTCTGTCGCCCAGGC-7.06
MEX_1CAediting_248871chr2_232724592_+232724577:2327245993SS0+5iCTGTCTCGCTCTGTCACCCAGGC-5.97CTGTCTCGCTCTGTCGCCCAGGC-7.06
ESCAediting_248882chr2_232724690_+232724689:2327246975SS2+0iAAGGCAAGT3.24AGGGCAAGT2.7
MEX_1CAediting_248882chr2_232724690_+232724689:2327246975SS2+0iAAGGCAAGT3.24AGGGCAAGT2.7
MEX_2CAediting_248882chr2_232724690_+232724689:2327246975SS2+0iAAGGCAAGT3.24AGGGCAAGT2.7

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000204120.13.GIGYF2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000204120.13.GIGYF2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GIGYF2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for GIGYF2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GIGYF2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-3940-3p2328602032328602097mer-m8232860189232860210142.00-21.15
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-7112-5p2328602002328602056mer232860183232860206143.00-24.03
CAediting_249058chr2_232860232_+ENSG00000204120.13ENST00000629305hsa-miR-1199-5p2328602252328602317mer-m8232860213232860232156.00-28.10
CAediting_249058chr2_232860232_+ENSG00000204120.13ENST00000629305hsa-miR-3622a-3p2328602282328602358mer-1a232860214232860235148.00-19.39
CAediting_249058chr2_232860232_+ENSG00000204120.13ENST00000629305hsa-miR-3622b-3p2328602282328602358mer-1a232860215232860235157.00-23.90
CAediting_249058chr2_232860232_+ENSG00000204120.13ENST00000629305hsa-miR-6751-3p2328602252328602317mer-m8232860212232860232141.00-13.15

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-31162328602032328602086mer232860186232860209147-31.34
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-31162328602032328602086mer232860186232860209147-31.34
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-5189-5p2328602002328602067mer-m8232860184232860207150-20.87
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-6122328602002328602067mer-m8232860184232860207149-21.95
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-6612328602022328602087mer-m8232860185232860209142-18.63
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-68602328602002328602067mer-m8232860186232860207148-22.51
CAediting_249057chr2_232860206_+ENSG00000204120.13ENST00000629305hsa-miR-939-3p2328602012328602077mer-m8232860188232860208140-15.63

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000204120.13ENST00000629305hsa-miR-605-3p2328588772328588848mer-1a232858863232858884152-16.18
CAediting_980496chr14_31014685_-ENSG00000204120.13ENST00000629305hsa-miR-624-3p2328570722328570787mer-m8232857061232857079147-19.64
CAediting_980496chr14_31014685_-ENSG00000204120.13ENST00000409480hsa-miR-624-3p2328570722328570787mer-m8232857061232857079147-19.64
CAediting_980496chr14_31014685_-ENSG00000204120.13ENST00000409547hsa-miR-624-3p2328570722328570787mer-m8232857061232857079147-19.64
CAediting_980496chr14_31014685_-ENSG00000204120.13ENST00000409196hsa-miR-624-3p2328570722328570787mer-m8232857061232857079147-19.64
CAediting_980496chr14_31014685_-ENSG00000204120.13ENST00000409451hsa-miR-624-3p2328570722328570787mer-m8232857061232857079147-19.64
CAediting_1229415chr17_67471547_+ENSG00000204120.13ENST00000629305hsa-miR-548aa2328601402328601478mer-1a232860123232860147140-9.58
CAediting_1229415chr17_67471547_+ENSG00000204120.13ENST00000629305hsa-miR-548aa2328603332328603408mer-1a232860316232860340168-11.76
CAediting_1351755chr19_40282625_-ENSG00000204120.13ENST00000629305hsa-miR-6412328571622328571676mer232857145232857168145-19.4
CAediting_1368054chr19_46709310_-ENSG00000204120.13ENST00000629305hsa-miR-320e2328594242328594307mer-m8232859413232859431147-19.97
CAediting_524911chr7_5495852_-ENSG00000204120.13ENST00000629305hsa-miR-589-3p2328582822328582898mer-1a232858266232858289156-23.41
CAediting_1351755chr19_40282625_-ENSG00000204120.13ENST00000409480hsa-miR-6412328571622328571676mer232857145232857168145-19.4
CAediting_524911chr7_5495852_-ENSG00000204120.13ENST00000409480hsa-miR-589-3p2328582822328582898mer-1a232858266232858289156-23.41
CAediting_1351755chr19_40282625_-ENSG00000204120.13ENST00000409547hsa-miR-6412328571622328571676mer232857145232857168145-19.4
CAediting_524911chr7_5495852_-ENSG00000204120.13ENST00000409547hsa-miR-589-3p2328582822328582898mer-1a232858266232858289156-23.41
CAediting_1351755chr19_40282625_-ENSG00000204120.13ENST00000409196hsa-miR-6412328571622328571676mer232857145232857168145-19.4
CAediting_524911chr7_5495852_-ENSG00000204120.13ENST00000409196hsa-miR-589-3p2328582822328582898mer-1a232858266232858289156-23.41
CAediting_1351755chr19_40282625_-ENSG00000204120.13ENST00000409451hsa-miR-6412328571622328571676mer232857145232857168145-19.4
CAediting_524911chr7_5495852_-ENSG00000204120.13ENST00000409451hsa-miR-589-3p2328582822328582898mer-1a232858266232858289156-23.41
CAediting_77128chr1_85133844_+ENSG00000204120.13ENST00000458528hsa-miR-4423-3p2327914272327914337mer-m8232791414232791434140-12.68
CAediting_604450chr7_133034877_-ENSG00000204120.13ENST00000458528hsa-miR-36542327947612327947688mer-1a232794748232794768147-16.58

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1368054chr19_46709310_-ENSG00000204120.13ENST00000629305hsa-miR-320e2328602902328602967mer-m8232860280232860297150-17.95
CAediting_396018chr5_1062918_-ENSG00000204120.13ENST00000629305hsa-miR-46352328580742328580807mer-m8232858061232858081145-10.54
CAediting_1351755chr19_40282625_-ENSG00000204120.13ENST00000629305hsa-miR-6412328596582328596647mer-m8232859641232859665155-15.45
CAediting_396018chr5_1062918_-ENSG00000204120.13ENST00000409480hsa-miR-46352328580742328580807mer-m8232858061232858081145-10.54
CAediting_396018chr5_1062918_-ENSG00000204120.13ENST00000409547hsa-miR-46352328580742328580807mer-m8232858061232858081145-10.54
CAediting_396018chr5_1062918_-ENSG00000204120.13ENST00000409196hsa-miR-46352328580742328580807mer-m8232858061232858081145-10.54
CAediting_396018chr5_1062918_-ENSG00000204120.13ENST00000409451hsa-miR-46352328580742328580807mer-m8232858061232858081145-10.54

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GIGYF2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000409547.4protein_codingSoverviewSoverview
ENST00000425040.4protein_codingSoverviewSoverview
ENST00000427233.4protein_codingSoverviewSoverview
ENST00000428883.4protein_codingSoverviewSoverview
ENST00000430720.4protein_codingSoverviewSoverview
ENST00000464402.4processed_transcriptSoverviewSoverview
ENST00000464805.4processed_transcriptSoverviewSoverview
ENST00000474465.4processed_transcriptSoverviewSoverview
ENST00000476995.4processed_transcriptSoverviewSoverview
ENST00000482666.4processed_transcriptSoverviewSoverview
ENST00000483164.4processed_transcriptSoverviewSoverview
ENST00000490229.4processed_transcriptSoverviewSoverview
ENST00000490612.4processed_transcriptSoverviewSoverview
ENST00000629305.1protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_248954ENST00000409547.4chr2_232734470_+-1888.80-1887.50-1889.00
CAediting_248955ENST00000409547.4chr2_232734471_+-1887.50-1887.50-1889.00
CAediting_248956ENST00000409547.4chr2_232734479_+-1886.90-1887.50-1889.00
CAediting_248870ENST00000425040.4chr2_232724576_+-172.90-172.90-185.90
CAediting_248871ENST00000425040.4chr2_232724592_+-173.70-172.90-185.90
CAediting_248872ENST00000425040.4chr2_232724601_+-172.20-172.90-185.90
CAediting_248873ENST00000425040.4chr2_232724643_+-177.40-172.90-185.90
CAediting_248874ENST00000425040.4chr2_232724649_+-173.10-172.90-185.90
CAediting_248875ENST00000425040.4chr2_232724650_+-172.90-172.90-185.90
CAediting_248876ENST00000425040.4chr2_232724651_+-172.90-172.90-185.90
CAediting_248877ENST00000425040.4chr2_232724662_+-174.40-172.90-185.90
CAediting_248878ENST00000425040.4chr2_232724667_+-172.20-172.90-185.90
CAediting_248879ENST00000425040.4chr2_232724675_+-172.30-172.90-185.90
CAediting_248880ENST00000425040.4chr2_232724676_+-176.50-172.90-185.90
CAediting_248881ENST00000425040.4chr2_232724679_+-177.20-172.90-185.90
CAediting_248882ENST00000425040.4chr2_232724690_+-175.20-172.90-185.90
CAediting_248870ENST00000427233.4chr2_232724576_+-158.70-158.90-173.40
CAediting_248871ENST00000427233.4chr2_232724592_+-160.20-158.90-173.40
CAediting_248872ENST00000427233.4chr2_232724601_+-158.50-158.90-173.40
CAediting_248873ENST00000427233.4chr2_232724643_+-163.40-158.90-173.40
CAediting_248874ENST00000427233.4chr2_232724649_+-159.40-158.90-173.40
CAediting_248875ENST00000427233.4chr2_232724650_+-159.00-158.90-173.40
CAediting_248876ENST00000427233.4chr2_232724651_+-161.80-158.90-173.40
CAediting_248877ENST00000427233.4chr2_232724662_+-160.00-158.90-173.40
CAediting_248878ENST00000427233.4chr2_232724667_+-158.90-158.90-173.40
CAediting_248879ENST00000427233.4chr2_232724675_+-159.70-158.90-173.40
CAediting_248880ENST00000427233.4chr2_232724676_+-162.70-158.90-173.40
CAediting_248881ENST00000427233.4chr2_232724679_+-162.40-158.90-173.40
CAediting_248882ENST00000427233.4chr2_232724690_+-159.10-158.90-173.40
CAediting_248954ENST00000428883.4chr2_232734470_+-169.40-168.70-173.20
CAediting_248955ENST00000428883.4chr2_232734471_+-168.30-168.70-173.20
CAediting_248956ENST00000428883.4chr2_232734479_+-168.70-168.70-173.20
CAediting_248870ENST00000430720.4chr2_232724576_+-175.60-174.70-191.40
CAediting_248871ENST00000430720.4chr2_232724592_+-175.50-174.70-191.40
CAediting_248872ENST00000430720.4chr2_232724601_+-174.00-174.70-191.40
CAediting_248873ENST00000430720.4chr2_232724643_+-179.20-174.70-191.40
CAediting_248874ENST00000430720.4chr2_232724649_+-175.50-174.70-191.40
CAediting_248875ENST00000430720.4chr2_232724650_+-175.60-174.70-191.40
CAediting_248876ENST00000430720.4chr2_232724651_+-175.70-174.70-191.40
CAediting_248877ENST00000430720.4chr2_232724662_+-178.10-174.70-191.40
CAediting_248878ENST00000430720.4chr2_232724667_+-174.00-174.70-191.40
CAediting_248879ENST00000430720.4chr2_232724675_+-174.00-174.70-191.40
CAediting_248880ENST00000430720.4chr2_232724676_+-178.30-174.70-191.40
CAediting_248881ENST00000430720.4chr2_232724679_+-177.40-174.70-191.40
CAediting_248882ENST00000430720.4chr2_232724690_+-174.40-174.70-191.40
CAediting_248870ENST00000464402.4chr2_232724576_+-152.00-152.00-165.00
CAediting_248871ENST00000464402.4chr2_232724592_+-152.80-152.00-165.00
CAediting_248872ENST00000464402.4chr2_232724601_+-151.30-152.00-165.00
CAediting_248873ENST00000464402.4chr2_232724643_+-156.50-152.00-165.00
CAediting_248874ENST00000464402.4chr2_232724649_+-152.20-152.00-165.00
CAediting_248875ENST00000464402.4chr2_232724650_+-152.00-152.00-165.00
CAediting_248876ENST00000464402.4chr2_232724651_+-153.60-152.00-165.00
CAediting_248877ENST00000464402.4chr2_232724662_+-152.20-152.00-165.00
CAediting_248878ENST00000464402.4chr2_232724667_+-151.30-152.00-165.00
CAediting_248879ENST00000464402.4chr2_232724675_+-151.30-152.00-165.00
CAediting_248880ENST00000464402.4chr2_232724676_+-155.60-152.00-165.00
CAediting_248881ENST00000464402.4chr2_232724679_+-153.30-152.00-165.00
CAediting_248882ENST00000464402.4chr2_232724690_+-152.60-152.00-165.00
CAediting_248954ENST00000464805.4chr2_232734470_+-273.00-270.80-279.30
CAediting_248955ENST00000464805.4chr2_232734471_+-273.90-270.80-279.30
CAediting_248956ENST00000464805.4chr2_232734479_+-272.90-270.80-279.30
CAediting_248823ENST00000474465.4chr2_232705535_+-215.60-215.60-216.30
CAediting_248824ENST00000474465.4chr2_232705927_+-216.60-215.60-216.30
CAediting_248954ENST00000476995.4chr2_232734470_+-203.10-200.50-205.30
CAediting_248955ENST00000476995.4chr2_232734471_+-203.30-200.50-205.30
CAediting_248956ENST00000476995.4chr2_232734479_+-201.70-200.50-205.30
CAediting_248870ENST00000482666.4chr2_232724576_+-312.20-312.80-325.90
CAediting_248871ENST00000482666.4chr2_232724592_+-312.80-312.80-325.90
CAediting_248872ENST00000482666.4chr2_232724601_+-312.50-312.80-325.90
CAediting_248873ENST00000482666.4chr2_232724643_+-317.30-312.80-325.90
CAediting_248874ENST00000482666.4chr2_232724649_+-316.70-312.80-325.90
CAediting_248875ENST00000482666.4chr2_232724650_+-313.20-312.80-325.90
CAediting_248876ENST00000482666.4chr2_232724651_+-312.80-312.80-325.90
CAediting_248877ENST00000482666.4chr2_232724662_+-312.40-312.80-325.90
CAediting_248878ENST00000482666.4chr2_232724667_+-312.00-312.80-325.90
CAediting_248879ENST00000482666.4chr2_232724675_+-312.50-312.80-325.90
CAediting_248880ENST00000482666.4chr2_232724676_+-316.20-312.80-325.90
CAediting_248881ENST00000482666.4chr2_232724679_+-313.70-312.80-325.90
CAediting_248882ENST00000482666.4chr2_232724690_+-312.80-312.80-325.90
CAediting_248954ENST00000483164.4chr2_232734470_+-156.20-152.70-156.60
CAediting_248955ENST00000483164.4chr2_232734471_+-154.60-152.70-156.60
CAediting_248956ENST00000483164.4chr2_232734479_+-152.70-152.70-156.60
CAediting_248954ENST00000490229.4chr2_232734470_+-195.70-192.50-198.40
CAediting_248955ENST00000490229.4chr2_232734471_+-195.20-192.50-198.40
CAediting_248956ENST00000490229.4chr2_232734479_+-193.60-192.50-198.40
CAediting_248954ENST00000490612.4chr2_232734470_+-153.60-151.40-156.40
CAediting_248955ENST00000490612.4chr2_232734471_+-152.40-151.40-156.40
CAediting_248956ENST00000490612.4chr2_232734479_+-152.80-151.40-156.40
CAediting_249057ENST00000629305.1chr2_232860206_+-2498.20-2498.10-2500.00
CAediting_249058ENST00000629305.1chr2_232860232_+-2498.30-2498.10-2500.00

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Relation with ADAR for GIGYF2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_248900chr2_232726209_+0.04662140173438980.24217450092233....

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Relation with cancer stages for GIGYF2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for GIGYF2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for GIGYF2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GIGYF2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
GIGYF2C4083045PARKINSON DISEASE 11, AUTOSOMAL DOMINANT, SUSCEPTIBILITY TO5CTD_human;GENOMICS_ENGLAND;UNIPROT
GIGYF2C1535926Neurodevelopmental Disorders1CTD_human