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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: PCDHGA12 (CAeditome ID:26025) |
Gene summary for PCDHGA12 |
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Gene information | Gene symbol | PCDHGA12 | Gene ID | 26025 |
Gene name | protocadherin gamma subfamily A, 12 | |
Synonyms | CDH21|FIB3|PCDH-GAMMA-A12 | |
Cytomap | 5q31.3 | |
Type of gene | protein-coding | |
Description | protocadherin gamma-A12cadherin 21fibroblast cadherin FIB3fibroblast cadherin-3 | |
Modification date | 20210518 | |
UniProtAcc | O60330 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for PCDHGA12 |
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CAediting_437309(141433238, +), CAediting_437310(141433245, +), CAediting_437311(141433273, +), CAediting_437312(141433297, +), CAediting_437313(141433323, +), CAediting_437314(141433420, +), CAediting_437315(141433424, +), CAediting_437316(141433494, +), CAediting_437317(141433495, +), CAediting_437318(141433508, +), CAediting_437319(141433717, +), CAediting_437320(141433757, +), CAediting_437321(141433758, +), CAediting_437322(141433778, +), CAediting_437323(141433787, +), CAediting_437324(141437940, +), CAediting_437325(141437993, +), CAediting_437326(141438010, +), CAediting_437327(141438015, +), CAediting_437328(141439113, +), CAediting_437329(141443285, +), CAediting_437330(141443405, +), CAediting_437331(141443471, +), CAediting_437332(141446741, +), CAediting_437333(141448011, +), CAediting_437334(141448076, +), CAediting_437335(141449329, +), CAediting_437336(141450550, +), CAediting_437337(141450673, +), CAediting_437338(141450674, +), CAediting_437339(141451010, +), CAediting_437340(141451696, +), CAediting_437341(141451698, +), CAediting_437342(141451856, +), CAediting_437343(141452672, +), CAediting_437344(141453177, +), CAediting_437345(141453183, +), CAediting_437346(141453256, +), CAediting_437347(141453386, +), CAediting_437348(141453394, +), CAediting_437349(141453406, +), CAediting_437350(141454486, +), CAediting_437351(141456096, +), CAediting_437352(141458845, +), CAediting_437353(141459957, +), CAediting_437354(141459958, +), CAediting_437355(141459998, +), CAediting_437356(141461693, +), CAediting_437357(141464010, +), CAediting_437358(141464031, +), CAediting_437359(141464100, +), CAediting_437360(141464154, +), CAediting_437361(141464167, +), CAediting_437362(141464171, +), CAediting_437363(141464190, +), CAediting_437364(141464217, +), CAediting_437365(141464755, +), CAediting_437366(141464808, +), CAediting_437367(141464813, +), CAediting_437368(141464851, +), CAediting_437369(141464856, +), CAediting_437370(141464864, +), CAediting_437371(141464868, +), CAediting_437372(141464872, +), CAediting_437373(141464878, +), CAediting_437374(141464880, +), CAediting_437375(141464900, +), CAediting_437376(141464977, +), CAediting_437377(141464994, +), CAediting_437378(141465010, +), CAediting_437379(141465868, +), CAediting_437380(141466210, +), CAediting_437381(141466283, +), CAediting_437382(141466310, +), CAediting_437383(141467122, +), CAediting_437384(141467200, +), CAediting_437385(141467287, +), CAediting_437386(141467327, +), CAediting_437387(141467336, +), CAediting_437388(141467685, +), CAediting_437389(141467712, +), CAediting_437390(141467726, +), CAediting_437391(141467731, +), CAediting_437392(141467742, +), CAediting_437393(141467762, +), CAediting_437394(141467776, +), CAediting_437395(141467784, +), CAediting_437396(141467785, +), CAediting_437397(141467788, +), CAediting_437398(141467798, +), CAediting_437399(141467800, +), CAediting_437400(141467806, +), CAediting_437401(141467811, +), CAediting_437402(141467816, +), CAediting_437403(141467856, +), CAediting_437404(141467859, +), CAediting_437405(141467879, +), CAediting_437406(141467893, +), CAediting_437407(141467894, +), CAediting_437408(141467906, +), CAediting_437409(141467911, +), CAediting_437410(141467921, +), CAediting_437411(141467927, +), CAediting_437412(141467933, +), CAediting_437413(141467936, +), CAediting_437414(141467939, +), CAediting_437415(141467951, +), CAediting_437416(141468061, +), CAediting_437417(141468063, +), CAediting_437418(141468069, +), CAediting_437419(141468070, +), CAediting_437420(141468075, +), CAediting_437421(141468124, +), CAediting_437422(141468126, +), CAediting_437423(141468147, +), CAediting_437424(141468149, +), CAediting_437425(141468163, +), CAediting_437426(141468169, +), CAediting_437427(141468172, +), CAediting_437428(141468173, +), CAediting_437429(141468174, +), CAediting_437430(141468175, +), CAediting_437431(141468186, +), CAediting_437432(141468204, +), CAediting_437433(141468205, +), CAediting_437434(141468210, +), CAediting_437435(141468224, +), CAediting_437436(141468231, +), CAediting_437437(141468237, +), CAediting_437438(141468245, +), CAediting_437439(141468246, +), CAediting_437440(141468257, +), CAediting_437441(141468270, +), CAediting_437442(141468275, +), CAediting_437443(141468280, +), CAediting_437444(141468745, +), CAediting_437445(141469021, +), CAediting_437446(141469022, +), CAediting_437447(141469043, +), CAediting_437448(141469086, +), CAediting_437449(141469094, +), CAediting_437450(141469118, +), CAediting_437451(141469129, +), CAediting_437452(141469133, +), CAediting_437453(141469147, +), CAediting_437454(141469155, +), CAediting_437455(141469165, +), CAediting_437456(141469182, +), CAediting_437457(141469183, +), CAediting_437458(141469196, +), CAediting_437459(141469206, +), CAediting_437460(141469232, +), CAediting_437461(141469257, +), CAediting_437462(141469264, +), CAediting_437463(141469265, +), CAediting_437464(141469313, +), CAediting_437465(141469321, +), CAediting_437466(141469322, +), CAediting_437467(141469364, +), CAediting_437468(141469454, +), CAediting_437469(141469671, +), CAediting_437470(141469691, +), CAediting_437471(141469710, +), CAediting_437472(141469713, +), CAediting_437473(141469724, +), CAediting_437474(141469726, +), CAediting_437475(141469727, +), CAediting_437476(141469728, +), CAediting_437477(141469860, +), CAediting_437478(141469893, +), CAediting_437479(141469906, +), CAediting_437480(141469921, +), CAediting_437481(141470009, +), CAediting_437482(141470050, +), CAediting_437483(141470084, +), CAediting_437484(141470092, +), CAediting_437485(141470108, +), CAediting_437486(141470765, +), CAediting_437487(141470788, +), CAediting_437488(141470792, +), CAediting_437489(141470800, +), CAediting_437490(141470821, +), CAediting_437491(141470830, +), CAediting_437492(141470937, +), CAediting_437493(141470951, +), CAediting_437494(141471150, +), CAediting_437495(141471234, +), CAediting_437496(141471251, +), CAediting_437497(141471294, +), CAediting_437498(141471325, +), CAediting_437499(141472364, +), CAediting_437500(141472387, +), CAediting_437501(141472461, +), CAediting_437502(141472465, +), CAediting_437503(141472724, +), CAediting_437504(141472730, +), CAediting_437505(141472731, +), CAediting_437506(141472784, +), CAediting_437507(141472785, +), CAediting_437508(141472796, +), CAediting_437509(141472809, +), CAediting_437510(141472822, +), CAediting_437511(141472825, +), CAediting_437512(141472826, +), CAediting_437513(141472829, +), CAediting_437514(141472831, +), CAediting_437515(141472839, +), CAediting_437516(141472892, +), CAediting_437517(141472898, +), CAediting_437518(141472907, +), CAediting_437519(141472911, +), CAediting_437520(141472912, +), CAediting_437521(141472935, +), CAediting_437522(141472936, +), CAediting_437523(141480318, +), CAediting_437524(141480354, +), CAediting_437525(141480378, +), CAediting_437526(141480650, +), CAediting_437527(141480655, +), CAediting_437528(141480656, +), CAediting_437529(141480858, +), CAediting_437530(141480861, +), CAediting_437531(141480880, +), CAediting_437532(141480906, +), CAediting_437533(141480918, +), CAediting_437534(141480930, +), CAediting_437535(141480983, +), CAediting_437536(141480993, +), CAediting_437537(141481040, +), CAediting_437538(141481075, +), CAediting_437539(141481590, +), CAediting_437540(141481964, +), CAediting_437541(141481974, +), CAediting_437542(141482034, +), CAediting_437543(141483067, +), CAediting_437544(141503492, +), CAediting_437545(141503493, +), CAediting_437546(141503501, +), CAediting_437547(141503505, +), CAediting_437548(141504978, +), CAediting_437549(141504986, +), |
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RNA editing positional annotations for PCDHGA12 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_437309 | chr5_141433238_+ | intronic |
CAediting_437310 | chr5_141433245_+ | intronic |
CAediting_437311 | chr5_141433273_+ | intronic |
CAediting_437312 | chr5_141433297_+ | intronic |
CAediting_437313 | chr5_141433323_+ | intronic |
CAediting_437314 | chr5_141433420_+ | intronic |
CAediting_437315 | chr5_141433424_+ | intronic |
CAediting_437316 | chr5_141433494_+ | intronic |
CAediting_437317 | chr5_141433495_+ | intronic |
CAediting_437318 | chr5_141433508_+ | intronic |
CAediting_437319 | chr5_141433717_+ | intronic |
CAediting_437320 | chr5_141433757_+ | intronic |
CAediting_437321 | chr5_141433758_+ | intronic |
CAediting_437322 | chr5_141433778_+ | intronic |
CAediting_437323 | chr5_141433787_+ | intronic |
CAediting_437324 | chr5_141437940_+ | intronic |
CAediting_437325 | chr5_141437993_+ | intronic |
CAediting_437326 | chr5_141438010_+ | intronic |
CAediting_437327 | chr5_141438015_+ | intronic |
CAediting_437328 | chr5_141439113_+ | intronic |
CAediting_437329 | chr5_141443285_+ | intronic |
CAediting_437330 | chr5_141443405_+ | intronic |
CAediting_437331 | chr5_141443471_+ | intronic |
CAediting_437332 | chr5_141446741_+ | intronic |
CAediting_437333 | chr5_141448011_+ | intronic |
CAediting_437334 | chr5_141448076_+ | intronic |
CAediting_437335 | chr5_141449329_+ | intronic |
CAediting_437336 | chr5_141450550_+ | intronic |
CAediting_437337 | chr5_141450673_+ | intronic |
CAediting_437338 | chr5_141450674_+ | intronic |
CAediting_437339 | chr5_141451010_+ | intronic |
CAediting_437340 | chr5_141451696_+ | intronic |
CAediting_437341 | chr5_141451698_+ | intronic |
CAediting_437342 | chr5_141451856_+ | intronic |
CAediting_437343 | chr5_141452672_+ | intronic |
CAediting_437344 | chr5_141453177_+ | intronic |
CAediting_437345 | chr5_141453183_+ | intronic |
CAediting_437346 | chr5_141453256_+ | intronic |
CAediting_437347 | chr5_141453386_+ | intronic |
CAediting_437348 | chr5_141453394_+ | intronic |
CAediting_437349 | chr5_141453406_+ | intronic |
CAediting_437350 | chr5_141454486_+ | intronic |
CAediting_437351 | chr5_141456096_+ | intronic |
CAediting_437352 | chr5_141458845_+ | intronic |
CAediting_437353 | chr5_141459957_+ | intronic |
CAediting_437354 | chr5_141459958_+ | intronic |
CAediting_437355 | chr5_141459998_+ | intronic |
CAediting_437356 | chr5_141461693_+ | intronic |
CAediting_437357 | chr5_141464010_+ | intronic |
CAediting_437358 | chr5_141464031_+ | intronic |
CAediting_437359 | chr5_141464100_+ | intronic |
CAediting_437360 | chr5_141464154_+ | intronic |
CAediting_437361 | chr5_141464167_+ | intronic |
CAediting_437362 | chr5_141464171_+ | intronic |
CAediting_437363 | chr5_141464190_+ | intronic |
CAediting_437364 | chr5_141464217_+ | intronic |
CAediting_437365 | chr5_141464755_+ | intronic |
CAediting_437366 | chr5_141464808_+ | intronic |
CAediting_437367 | chr5_141464813_+ | intronic |
CAediting_437368 | chr5_141464851_+ | intronic |
CAediting_437369 | chr5_141464856_+ | intronic |
CAediting_437370 | chr5_141464864_+ | intronic |
CAediting_437371 | chr5_141464868_+ | intronic |
CAediting_437372 | chr5_141464872_+ | intronic |
CAediting_437373 | chr5_141464878_+ | intronic |
CAediting_437374 | chr5_141464880_+ | intronic |
CAediting_437375 | chr5_141464900_+ | intronic |
CAediting_437376 | chr5_141464977_+ | intronic |
CAediting_437377 | chr5_141464994_+ | intronic |
CAediting_437378 | chr5_141465010_+ | intronic |
CAediting_437379 | chr5_141465868_+ | intronic |
CAediting_437380 | chr5_141466210_+ | intronic |
CAediting_437381 | chr5_141466283_+ | intronic |
CAediting_437382 | chr5_141466310_+ | intronic |
CAediting_437383 | chr5_141467122_+ | intronic |
CAediting_437384 | chr5_141467200_+ | intronic |
CAediting_437385 | chr5_141467287_+ | intronic |
CAediting_437386 | chr5_141467327_+ | intronic |
CAediting_437387 | chr5_141467336_+ | intronic |
CAediting_437388 | chr5_141467685_+ | intronic |
CAediting_437389 | chr5_141467712_+ | intronic |
CAediting_437390 | chr5_141467726_+ | intronic |
CAediting_437391 | chr5_141467731_+ | intronic |
CAediting_437392 | chr5_141467742_+ | intronic |
CAediting_437393 | chr5_141467762_+ | intronic |
CAediting_437394 | chr5_141467776_+ | intronic |
CAediting_437395 | chr5_141467784_+ | intronic |
CAediting_437396 | chr5_141467785_+ | intronic |
CAediting_437397 | chr5_141467788_+ | intronic |
CAediting_437398 | chr5_141467798_+ | intronic |
CAediting_437399 | chr5_141467800_+ | intronic |
CAediting_437400 | chr5_141467806_+ | intronic |
CAediting_437401 | chr5_141467811_+ | intronic |
CAediting_437402 | chr5_141467816_+ | intronic |
CAediting_437403 | chr5_141467856_+ | intronic |
CAediting_437404 | chr5_141467859_+ | intronic |
CAediting_437405 | chr5_141467879_+ | intronic |
CAediting_437406 | chr5_141467893_+ | intronic |
CAediting_437407 | chr5_141467894_+ | intronic |
CAediting_437408 | chr5_141467906_+ | intronic |
CAediting_437409 | chr5_141467911_+ | intronic |
CAediting_437410 | chr5_141467921_+ | intronic |
CAediting_437411 | chr5_141467927_+ | intronic |
CAediting_437412 | chr5_141467933_+ | intronic |
CAediting_437413 | chr5_141467936_+ | intronic |
CAediting_437414 | chr5_141467939_+ | intronic |
CAediting_437415 | chr5_141467951_+ | intronic |
CAediting_437416 | chr5_141468061_+ | intronic |
CAediting_437417 | chr5_141468063_+ | intronic |
CAediting_437418 | chr5_141468069_+ | intronic |
CAediting_437419 | chr5_141468070_+ | intronic |
CAediting_437420 | chr5_141468075_+ | intronic |
CAediting_437421 | chr5_141468124_+ | intronic |
CAediting_437422 | chr5_141468126_+ | intronic |
CAediting_437423 | chr5_141468147_+ | intronic |
CAediting_437424 | chr5_141468149_+ | intronic |
CAediting_437425 | chr5_141468163_+ | intronic |
CAediting_437426 | chr5_141468169_+ | intronic |
CAediting_437427 | chr5_141468172_+ | intronic |
CAediting_437428 | chr5_141468173_+ | intronic |
CAediting_437429 | chr5_141468174_+ | intronic |
CAediting_437430 | chr5_141468175_+ | intronic |
CAediting_437431 | chr5_141468186_+ | intronic |
CAediting_437432 | chr5_141468204_+ | intronic |
CAediting_437433 | chr5_141468205_+ | intronic |
CAediting_437434 | chr5_141468210_+ | intronic |
CAediting_437435 | chr5_141468224_+ | intronic |
CAediting_437436 | chr5_141468231_+ | intronic |
CAediting_437437 | chr5_141468237_+ | intronic |
CAediting_437438 | chr5_141468245_+ | intronic |
CAediting_437439 | chr5_141468246_+ | intronic |
CAediting_437440 | chr5_141468257_+ | intronic |
CAediting_437441 | chr5_141468270_+ | intronic |
CAediting_437442 | chr5_141468275_+ | intronic |
CAediting_437443 | chr5_141468280_+ | intronic |
CAediting_437444 | chr5_141468745_+ | ncRNA_intronic |
CAediting_437445 | chr5_141469021_+ | ncRNA_intronic |
CAediting_437446 | chr5_141469022_+ | ncRNA_intronic |
CAediting_437447 | chr5_141469043_+ | ncRNA_intronic |
CAediting_437448 | chr5_141469086_+ | ncRNA_intronic |
CAediting_437449 | chr5_141469094_+ | ncRNA_intronic |
CAediting_437450 | chr5_141469118_+ | ncRNA_intronic |
CAediting_437451 | chr5_141469129_+ | ncRNA_intronic |
CAediting_437452 | chr5_141469133_+ | ncRNA_intronic |
CAediting_437453 | chr5_141469147_+ | ncRNA_intronic |
CAediting_437454 | chr5_141469155_+ | ncRNA_intronic |
CAediting_437455 | chr5_141469165_+ | ncRNA_intronic |
CAediting_437456 | chr5_141469182_+ | ncRNA_intronic |
CAediting_437457 | chr5_141469183_+ | ncRNA_intronic |
CAediting_437458 | chr5_141469196_+ | ncRNA_intronic |
CAediting_437459 | chr5_141469206_+ | ncRNA_intronic |
CAediting_437460 | chr5_141469232_+ | ncRNA_intronic |
CAediting_437461 | chr5_141469257_+ | ncRNA_intronic |
CAediting_437462 | chr5_141469264_+ | ncRNA_intronic |
CAediting_437463 | chr5_141469265_+ | ncRNA_intronic |
CAediting_437464 | chr5_141469313_+ | ncRNA_intronic |
CAediting_437465 | chr5_141469321_+ | ncRNA_intronic |
CAediting_437466 | chr5_141469322_+ | ncRNA_intronic |
CAediting_437467 | chr5_141469364_+ | ncRNA_intronic |
CAediting_437468 | chr5_141469454_+ | ncRNA_intronic |
CAediting_437469 | chr5_141469671_+ | ncRNA_intronic |
CAediting_437470 | chr5_141469691_+ | ncRNA_intronic |
CAediting_437471 | chr5_141469710_+ | ncRNA_intronic |
CAediting_437472 | chr5_141469713_+ | ncRNA_intronic |
CAediting_437473 | chr5_141469724_+ | ncRNA_intronic |
CAediting_437474 | chr5_141469726_+ | ncRNA_intronic |
CAediting_437475 | chr5_141469727_+ | ncRNA_intronic |
CAediting_437476 | chr5_141469728_+ | ncRNA_intronic |
CAediting_437477 | chr5_141469860_+ | ncRNA_intronic |
CAediting_437478 | chr5_141469893_+ | ncRNA_intronic |
CAediting_437479 | chr5_141469906_+ | ncRNA_intronic |
CAediting_437480 | chr5_141469921_+ | ncRNA_intronic |
CAediting_437481 | chr5_141470009_+ | ncRNA_intronic |
CAediting_437482 | chr5_141470050_+ | ncRNA_intronic |
CAediting_437483 | chr5_141470084_+ | ncRNA_intronic |
CAediting_437484 | chr5_141470092_+ | ncRNA_intronic |
CAediting_437485 | chr5_141470108_+ | ncRNA_intronic |
CAediting_437486 | chr5_141470765_+ | ncRNA_intronic |
CAediting_437487 | chr5_141470788_+ | ncRNA_intronic |
CAediting_437488 | chr5_141470792_+ | ncRNA_intronic |
CAediting_437489 | chr5_141470800_+ | ncRNA_intronic |
CAediting_437490 | chr5_141470821_+ | ncRNA_intronic |
CAediting_437491 | chr5_141470830_+ | ncRNA_intronic |
CAediting_437492 | chr5_141470937_+ | ncRNA_intronic |
CAediting_437493 | chr5_141470951_+ | ncRNA_intronic |
CAediting_437494 | chr5_141471150_+ | ncRNA_intronic |
CAediting_437495 | chr5_141471234_+ | ncRNA_intronic |
CAediting_437496 | chr5_141471251_+ | ncRNA_intronic |
CAediting_437497 | chr5_141471294_+ | ncRNA_intronic |
CAediting_437498 | chr5_141471325_+ | ncRNA_exonic |
CAediting_437499 | chr5_141472364_+ | intronic |
CAediting_437500 | chr5_141472387_+ | intronic |
CAediting_437501 | chr5_141472461_+ | intronic |
CAediting_437502 | chr5_141472465_+ | intronic |
CAediting_437503 | chr5_141472724_+ | intronic |
CAediting_437504 | chr5_141472730_+ | intronic |
CAediting_437505 | chr5_141472731_+ | intronic |
CAediting_437506 | chr5_141472784_+ | intronic |
CAediting_437507 | chr5_141472785_+ | intronic |
CAediting_437508 | chr5_141472796_+ | intronic |
CAediting_437509 | chr5_141472809_+ | intronic |
CAediting_437510 | chr5_141472822_+ | intronic |
CAediting_437511 | chr5_141472825_+ | intronic |
CAediting_437512 | chr5_141472826_+ | intronic |
CAediting_437513 | chr5_141472829_+ | intronic |
CAediting_437514 | chr5_141472831_+ | intronic |
CAediting_437515 | chr5_141472839_+ | intronic |
CAediting_437516 | chr5_141472892_+ | intronic |
CAediting_437517 | chr5_141472898_+ | intronic |
CAediting_437518 | chr5_141472907_+ | intronic |
CAediting_437519 | chr5_141472911_+ | intronic |
CAediting_437520 | chr5_141472912_+ | intronic |
CAediting_437521 | chr5_141472935_+ | intronic |
CAediting_437522 | chr5_141472936_+ | intronic |
CAediting_437523 | chr5_141480318_+ | ncRNA_intronic |
CAediting_437524 | chr5_141480354_+ | ncRNA_intronic |
CAediting_437525 | chr5_141480378_+ | ncRNA_intronic |
CAediting_437526 | chr5_141480650_+ | ncRNA_intronic |
CAediting_437527 | chr5_141480655_+ | ncRNA_intronic |
CAediting_437528 | chr5_141480656_+ | ncRNA_intronic |
CAediting_437529 | chr5_141480858_+ | ncRNA_intronic |
CAediting_437530 | chr5_141480861_+ | ncRNA_intronic |
CAediting_437531 | chr5_141480880_+ | ncRNA_intronic |
CAediting_437532 | chr5_141480906_+ | ncRNA_intronic |
CAediting_437533 | chr5_141480918_+ | ncRNA_intronic |
CAediting_437534 | chr5_141480930_+ | ncRNA_intronic |
CAediting_437535 | chr5_141480983_+ | ncRNA_intronic |
CAediting_437536 | chr5_141480993_+ | ncRNA_intronic |
CAediting_437537 | chr5_141481040_+ | ncRNA_intronic |
CAediting_437538 | chr5_141481075_+ | ncRNA_intronic |
CAediting_437539 | chr5_141481590_+ | ncRNA_intronic |
CAediting_437540 | chr5_141481964_+ | ncRNA_intronic |
CAediting_437541 | chr5_141481974_+ | ncRNA_intronic |
CAediting_437542 | chr5_141482034_+ | ncRNA_intronic |
CAediting_437543 | chr5_141483067_+ | ncRNA_intronic |
CAediting_437544 | chr5_141503492_+ | ncRNA_intronic |
CAediting_437545 | chr5_141503493_+ | ncRNA_intronic |
CAediting_437546 | chr5_141503501_+ | ncRNA_intronic |
CAediting_437547 | chr5_141503505_+ | ncRNA_intronic |
CAediting_437548 | chr5_141504978_+ | ncRNA_intronic |
CAediting_437549 | chr5_141504986_+ | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_437309 | chr5_141433238_+ | SINE | Alu | AluJo |
CAediting_437310 | chr5_141433245_+ | SINE | Alu | AluJo |
CAediting_437311 | chr5_141433273_+ | SINE | Alu | AluJo |
CAediting_437312 | chr5_141433297_+ | SINE | Alu | AluJo |
CAediting_437313 | chr5_141433323_+ | SINE | Alu | AluJo |
CAediting_437314 | chr5_141433420_+ | SINE | Alu | AluJo |
CAediting_437315 | chr5_141433424_+ | SINE | Alu | AluJo |
CAediting_437316 | chr5_141433494_+ | SINE | Alu | AluJo |
CAediting_437317 | chr5_141433495_+ | SINE | Alu | AluJo |
CAediting_437318 | chr5_141433508_+ | SINE | Alu | AluJo |
CAediting_437319 | chr5_141433717_+ | SINE | Alu | AluSp |
CAediting_437320 | chr5_141433757_+ | SINE | Alu | AluSp |
CAediting_437321 | chr5_141433758_+ | SINE | Alu | AluSp |
CAediting_437322 | chr5_141433778_+ | SINE | Alu | AluSp |
CAediting_437323 | chr5_141433787_+ | SINE | Alu | AluSp |
CAediting_437324 | chr5_141437940_+ | SINE | Alu | AluSc |
CAediting_437325 | chr5_141437993_+ | SINE | Alu | AluSc |
CAediting_437326 | chr5_141438010_+ | SINE | Alu | AluSc |
CAediting_437327 | chr5_141438015_+ | SINE | Alu | AluSc |
CAediting_437328 | chr5_141439113_+ | SINE | Alu | AluSx1 |
CAediting_437329 | chr5_141443285_+ | SINE | Alu | AluJb |
CAediting_437330 | chr5_141443405_+ | SINE | Alu | AluJb |
CAediting_437331 | chr5_141443471_+ | SINE | Alu | AluJb |
CAediting_437332 | chr5_141446741_+ | SINE | Alu | AluSx4 |
CAediting_437333 | chr5_141448011_+ | SINE | Alu | AluSq2 |
CAediting_437334 | chr5_141448076_+ | SINE | Alu | AluSq2 |
CAediting_437335 | chr5_141449329_+ | SINE | Alu | AluSz6 |
CAediting_437336 | chr5_141450550_+ | SINE | Alu | AluSq2 |
CAediting_437337 | chr5_141450673_+ | SINE | Alu | AluSq2 |
CAediting_437338 | chr5_141450674_+ | SINE | Alu | AluSq2 |
CAediting_437339 | chr5_141451010_+ | SINE | Alu | AluSx3 |
CAediting_437340 | chr5_141451696_+ | SINE | Alu | AluSz6 |
CAediting_437341 | chr5_141451698_+ | SINE | Alu | AluSz6 |
CAediting_437342 | chr5_141451856_+ | SINE | Alu | AluSz6 |
CAediting_437343 | chr5_141452672_+ | SINE | Alu | AluJo |
CAediting_437344 | chr5_141453177_+ | SINE | Alu | AluJb |
CAediting_437345 | chr5_141453183_+ | SINE | Alu | AluJb |
CAediting_437346 | chr5_141453256_+ | SINE | Alu | AluJb |
CAediting_437347 | chr5_141453386_+ | SINE | Alu | AluJb |
CAediting_437348 | chr5_141453394_+ | SINE | Alu | AluJb |
CAediting_437349 | chr5_141453406_+ | SINE | Alu | AluJb |
CAediting_437350 | chr5_141454486_+ | SINE | Alu | AluSp |
CAediting_437351 | chr5_141456096_+ | SINE | Alu | AluY |
CAediting_437352 | chr5_141458845_+ | SINE | Alu | AluJr |
CAediting_437353 | chr5_141459957_+ | SINE | Alu | AluSx1 |
CAediting_437354 | chr5_141459958_+ | SINE | Alu | AluSx1 |
CAediting_437355 | chr5_141459998_+ | SINE | Alu | AluSx1 |
CAediting_437356 | chr5_141461693_+ | SINE | Alu | AluSq |
CAediting_437357 | chr5_141464010_+ | SINE | Alu | AluSx1 |
CAediting_437358 | chr5_141464031_+ | SINE | Alu | AluSx1 |
CAediting_437359 | chr5_141464100_+ | SINE | Alu | AluSx1 |
CAediting_437360 | chr5_141464154_+ | SINE | Alu | AluSx1 |
CAediting_437361 | chr5_141464167_+ | SINE | Alu | AluSx1 |
CAediting_437362 | chr5_141464171_+ | SINE | Alu | AluSx1 |
CAediting_437363 | chr5_141464190_+ | SINE | Alu | AluSx1 |
CAediting_437364 | chr5_141464217_+ | SINE | Alu | AluSx1 |
CAediting_437365 | chr5_141464755_+ | SINE | Alu | AluJr4 |
CAediting_437366 | chr5_141464808_+ | SINE | Alu | AluJr4 |
CAediting_437367 | chr5_141464813_+ | SINE | Alu | AluJr4 |
CAediting_437368 | chr5_141464851_+ | SINE | Alu | AluJr4 |
CAediting_437369 | chr5_141464856_+ | SINE | Alu | AluJr4 |
CAediting_437370 | chr5_141464864_+ | SINE | Alu | AluJr4 |
CAediting_437371 | chr5_141464868_+ | SINE | Alu | AluJr4 |
CAediting_437372 | chr5_141464872_+ | SINE | Alu | AluJr4 |
CAediting_437373 | chr5_141464878_+ | SINE | Alu | AluJr4 |
CAediting_437374 | chr5_141464880_+ | SINE | Alu | AluJr4 |
CAediting_437375 | chr5_141464900_+ | SINE | Alu | AluJr4 |
CAediting_437376 | chr5_141464977_+ | SINE | Alu | AluJr4 |
CAediting_437377 | chr5_141464994_+ | SINE | Alu | AluJr4 |
CAediting_437378 | chr5_141465010_+ | SINE | Alu | AluJr4 |
CAediting_437379 | chr5_141465868_+ | SINE | Alu | AluY |
CAediting_437380 | chr5_141466210_+ | SINE | Alu | AluJb |
CAediting_437381 | chr5_141466283_+ | SINE | Alu | AluJb |
CAediting_437382 | chr5_141466310_+ | SINE | Alu | AluJb |
CAediting_437383 | chr5_141467122_+ | SINE | Alu | AluSz |
CAediting_437384 | chr5_141467200_+ | SINE | Alu | AluSz |
CAediting_437385 | chr5_141467287_+ | SINE | Alu | AluSz |
CAediting_437386 | chr5_141467327_+ | SINE | Alu | AluSz |
CAediting_437387 | chr5_141467336_+ | SINE | Alu | AluSz |
CAediting_437388 | chr5_141467685_+ | SINE | Alu | AluJb |
CAediting_437389 | chr5_141467712_+ | SINE | Alu | AluJb |
CAediting_437390 | chr5_141467726_+ | SINE | Alu | AluJb |
CAediting_437391 | chr5_141467731_+ | SINE | Alu | AluJb |
CAediting_437392 | chr5_141467742_+ | SINE | Alu | AluJb |
CAediting_437393 | chr5_141467762_+ | SINE | Alu | AluJb |
CAediting_437394 | chr5_141467776_+ | SINE | Alu | AluJb |
CAediting_437395 | chr5_141467784_+ | SINE | Alu | AluJb |
CAediting_437396 | chr5_141467785_+ | SINE | Alu | AluJb |
CAediting_437397 | chr5_141467788_+ | SINE | Alu | AluJb |
CAediting_437398 | chr5_141467798_+ | SINE | Alu | AluJb |
CAediting_437399 | chr5_141467800_+ | SINE | Alu | AluJb |
CAediting_437400 | chr5_141467806_+ | SINE | Alu | AluJb |
CAediting_437401 | chr5_141467811_+ | SINE | Alu | AluJb |
CAediting_437402 | chr5_141467816_+ | SINE | Alu | AluJb |
CAediting_437403 | chr5_141467856_+ | SINE | Alu | AluJb |
CAediting_437404 | chr5_141467859_+ | SINE | Alu | AluJb |
CAediting_437405 | chr5_141467879_+ | SINE | Alu | AluJb |
CAediting_437406 | chr5_141467893_+ | SINE | Alu | AluJb |
CAediting_437407 | chr5_141467894_+ | SINE | Alu | AluJb |
CAediting_437408 | chr5_141467906_+ | SINE | Alu | AluJb |
CAediting_437409 | chr5_141467911_+ | SINE | Alu | AluJb |
CAediting_437410 | chr5_141467921_+ | SINE | Alu | AluJb |
CAediting_437411 | chr5_141467927_+ | SINE | Alu | AluJb |
CAediting_437412 | chr5_141467933_+ | SINE | Alu | AluJb |
CAediting_437413 | chr5_141467936_+ | SINE | Alu | AluJb |
CAediting_437414 | chr5_141467939_+ | SINE | Alu | AluJb |
CAediting_437415 | chr5_141467951_+ | SINE | Alu | AluJb |
CAediting_437416 | chr5_141468061_+ | SINE | Alu | AluSq2 |
CAediting_437417 | chr5_141468063_+ | SINE | Alu | AluSq2 |
CAediting_437418 | chr5_141468069_+ | SINE | Alu | AluSq2 |
CAediting_437419 | chr5_141468070_+ | SINE | Alu | AluSq2 |
CAediting_437420 | chr5_141468075_+ | SINE | Alu | AluSq2 |
CAediting_437421 | chr5_141468124_+ | SINE | Alu | AluSq2 |
CAediting_437422 | chr5_141468126_+ | SINE | Alu | AluSq2 |
CAediting_437423 | chr5_141468147_+ | SINE | Alu | AluSq2 |
CAediting_437424 | chr5_141468149_+ | SINE | Alu | AluSq2 |
CAediting_437425 | chr5_141468163_+ | SINE | Alu | AluSq2 |
CAediting_437426 | chr5_141468169_+ | SINE | Alu | AluSq2 |
CAediting_437427 | chr5_141468172_+ | SINE | Alu | AluSq2 |
CAediting_437428 | chr5_141468173_+ | SINE | Alu | AluSq2 |
CAediting_437429 | chr5_141468174_+ | SINE | Alu | AluSq2 |
CAediting_437430 | chr5_141468175_+ | SINE | Alu | AluSq2 |
CAediting_437431 | chr5_141468186_+ | SINE | Alu | AluSq2 |
CAediting_437432 | chr5_141468204_+ | SINE | Alu | AluSq2 |
CAediting_437433 | chr5_141468205_+ | SINE | Alu | AluSq2 |
CAediting_437434 | chr5_141468210_+ | SINE | Alu | AluSq2 |
CAediting_437435 | chr5_141468224_+ | SINE | Alu | AluSq2 |
CAediting_437436 | chr5_141468231_+ | SINE | Alu | AluSq2 |
CAediting_437437 | chr5_141468237_+ | SINE | Alu | AluSq2 |
CAediting_437438 | chr5_141468245_+ | SINE | Alu | AluSq2 |
CAediting_437439 | chr5_141468246_+ | SINE | Alu | AluSq2 |
CAediting_437440 | chr5_141468257_+ | SINE | Alu | AluSq2 |
CAediting_437441 | chr5_141468270_+ | SINE | Alu | AluSq2 |
CAediting_437442 | chr5_141468275_+ | SINE | Alu | AluSq2 |
CAediting_437443 | chr5_141468280_+ | SINE | Alu | AluSq2 |
CAediting_437444 | chr5_141468745_+ | SINE | Alu | AluY |
CAediting_437445 | chr5_141469021_+ | SINE | Alu | AluJo |
CAediting_437446 | chr5_141469022_+ | SINE | Alu | AluJo |
CAediting_437447 | chr5_141469043_+ | SINE | Alu | AluJo |
CAediting_437448 | chr5_141469086_+ | SINE | Alu | AluJo |
CAediting_437449 | chr5_141469094_+ | SINE | Alu | AluJo |
CAediting_437450 | chr5_141469118_+ | SINE | Alu | AluJo |
CAediting_437451 | chr5_141469129_+ | SINE | Alu | AluJo |
CAediting_437452 | chr5_141469133_+ | SINE | Alu | AluJo |
CAediting_437453 | chr5_141469147_+ | SINE | Alu | AluJo |
CAediting_437454 | chr5_141469155_+ | SINE | Alu | AluJo |
CAediting_437455 | chr5_141469165_+ | SINE | Alu | AluJo |
CAediting_437456 | chr5_141469182_+ | SINE | Alu | AluJo |
CAediting_437457 | chr5_141469183_+ | SINE | Alu | AluJo |
CAediting_437458 | chr5_141469196_+ | SINE | Alu | AluJo |
CAediting_437459 | chr5_141469206_+ | SINE | Alu | AluJo |
CAediting_437460 | chr5_141469232_+ | SINE | Alu | AluJo |
CAediting_437461 | chr5_141469257_+ | SINE | Alu | AluJo |
CAediting_437462 | chr5_141469264_+ | SINE | Alu | AluJo |
CAediting_437463 | chr5_141469265_+ | SINE | Alu | AluJo |
CAediting_437464 | chr5_141469313_+ | SINE | Alu | AluSc |
CAediting_437465 | chr5_141469321_+ | SINE | Alu | AluSc |
CAediting_437466 | chr5_141469322_+ | SINE | Alu | AluSc |
CAediting_437467 | chr5_141469364_+ | SINE | Alu | AluSc |
CAediting_437468 | chr5_141469454_+ | SINE | Alu | AluSc |
CAediting_437469 | chr5_141469671_+ | LINE | L1 | L1MC5a |
CAediting_437470 | chr5_141469691_+ | LINE | L1 | L1MC5a |
CAediting_437471 | chr5_141469710_+ | LINE | L1 | L1MC5a |
CAediting_437472 | chr5_141469713_+ | LINE | L1 | L1MC5a |
CAediting_437473 | chr5_141469724_+ | LINE | L1 | L1MC5a |
CAediting_437474 | chr5_141469726_+ | LINE | L1 | L1MC5a |
CAediting_437475 | chr5_141469727_+ | LINE | L1 | L1MC5a |
CAediting_437476 | chr5_141469728_+ | LINE | L1 | L1MC5a |
CAediting_437477 | chr5_141469860_+ | SINE | Alu | AluSx |
CAediting_437478 | chr5_141469893_+ | SINE | Alu | AluSx |
CAediting_437479 | chr5_141469906_+ | SINE | Alu | AluSx |
CAediting_437480 | chr5_141469921_+ | SINE | Alu | AluSx |
CAediting_437481 | chr5_141470009_+ | SINE | Alu | AluSx |
CAediting_437482 | chr5_141470050_+ | SINE | Alu | AluSx |
CAediting_437483 | chr5_141470084_+ | SINE | Alu | AluSx |
CAediting_437484 | chr5_141470092_+ | SINE | Alu | AluSx |
CAediting_437485 | chr5_141470108_+ | SINE | Alu | AluSx |
CAediting_437486 | chr5_141470765_+ | SINE | Alu | AluJr |
CAediting_437487 | chr5_141470788_+ | SINE | Alu | AluJr |
CAediting_437488 | chr5_141470792_+ | SINE | Alu | AluJr |
CAediting_437489 | chr5_141470800_+ | SINE | Alu | AluJr |
CAediting_437490 | chr5_141470821_+ | SINE | Alu | AluJr |
CAediting_437491 | chr5_141470830_+ | SINE | Alu | AluJr |
CAediting_437492 | chr5_141470937_+ | SINE | Alu | AluJr |
CAediting_437493 | chr5_141470951_+ | SINE | Alu | AluJr |
CAediting_437494 | chr5_141471150_+ | SINE | Alu | AluSx1 |
CAediting_437495 | chr5_141471234_+ | SINE | Alu | AluSx1 |
CAediting_437496 | chr5_141471251_+ | SINE | Alu | AluSx1 |
CAediting_437497 | chr5_141471294_+ | SINE | Alu | AluSx1 |
CAediting_437498 | chr5_141471325_+ | SINE | Alu | AluSx1 |
CAediting_437499 | chr5_141472364_+ | SINE | Alu | AluSc8 |
CAediting_437500 | chr5_141472387_+ | SINE | Alu | AluSc8 |
CAediting_437501 | chr5_141472461_+ | SINE | Alu | AluSc8 |
CAediting_437502 | chr5_141472465_+ | SINE | Alu | AluSc8 |
CAediting_437503 | chr5_141472724_+ | SINE | Alu | AluSp |
CAediting_437504 | chr5_141472730_+ | SINE | Alu | AluSp |
CAediting_437505 | chr5_141472731_+ | SINE | Alu | AluSp |
CAediting_437506 | chr5_141472784_+ | SINE | Alu | AluSp |
CAediting_437507 | chr5_141472785_+ | SINE | Alu | AluSp |
CAediting_437508 | chr5_141472796_+ | SINE | Alu | AluSp |
CAediting_437509 | chr5_141472809_+ | SINE | Alu | AluSp |
CAediting_437510 | chr5_141472822_+ | SINE | Alu | AluSp |
CAediting_437511 | chr5_141472825_+ | SINE | Alu | AluSp |
CAediting_437512 | chr5_141472826_+ | SINE | Alu | AluSp |
CAediting_437513 | chr5_141472829_+ | SINE | Alu | AluSp |
CAediting_437514 | chr5_141472831_+ | SINE | Alu | AluSp |
CAediting_437515 | chr5_141472839_+ | SINE | Alu | AluSp |
CAediting_437516 | chr5_141472892_+ | SINE | Alu | AluSp |
CAediting_437517 | chr5_141472898_+ | SINE | Alu | AluSp |
CAediting_437518 | chr5_141472907_+ | SINE | Alu | AluSp |
CAediting_437519 | chr5_141472911_+ | SINE | Alu | AluSp |
CAediting_437520 | chr5_141472912_+ | SINE | Alu | AluSp |
CAediting_437521 | chr5_141472935_+ | SINE | Alu | AluSp |
CAediting_437522 | chr5_141472936_+ | SINE | Alu | AluSp |
CAediting_437523 | chr5_141480318_+ | SINE | Alu | AluJr |
CAediting_437524 | chr5_141480354_+ | SINE | Alu | AluJr |
CAediting_437525 | chr5_141480378_+ | SINE | Alu | AluJr |
CAediting_437526 | chr5_141480650_+ | DNA | hAT-Charlie | MER5B |
CAediting_437527 | chr5_141480655_+ | DNA | hAT-Charlie | MER5B |
CAediting_437528 | chr5_141480656_+ | DNA | hAT-Charlie | MER5B |
CAediting_437529 | chr5_141480858_+ | SINE | Alu | AluSx4 |
CAediting_437530 | chr5_141480861_+ | SINE | Alu | AluSx4 |
CAediting_437531 | chr5_141480880_+ | SINE | Alu | AluSx4 |
CAediting_437532 | chr5_141480906_+ | SINE | Alu | AluSx4 |
CAediting_437533 | chr5_141480918_+ | SINE | Alu | AluSx4 |
CAediting_437534 | chr5_141480930_+ | SINE | Alu | AluSx4 |
CAediting_437535 | chr5_141480983_+ | SINE | Alu | AluSx4 |
CAediting_437536 | chr5_141480993_+ | SINE | Alu | AluSx4 |
CAediting_437537 | chr5_141481040_+ | SINE | Alu | AluSx4 |
CAediting_437538 | chr5_141481075_+ | SINE | Alu | AluSx4 |
CAediting_437539 | chr5_141481590_+ | SINE | Alu | AluSq2 |
CAediting_437540 | chr5_141481964_+ | SINE | Alu | AluSq2 |
CAediting_437541 | chr5_141481974_+ | SINE | Alu | AluSq2 |
CAediting_437542 | chr5_141482034_+ | SINE | Alu | AluSq2 |
CAediting_437543 | chr5_141483067_+ | SINE | Alu | AluSx1 |
CAediting_437544 | chr5_141503492_+ | SINE | Alu | AluSx4 |
CAediting_437545 | chr5_141503493_+ | SINE | Alu | AluSx4 |
CAediting_437546 | chr5_141503501_+ | SINE | Alu | AluSx4 |
CAediting_437547 | chr5_141503505_+ | SINE | Alu | AluSx4 |
CAediting_437548 | chr5_141504978_+ | SINE | Alu | AluSx1 |
CAediting_437549 | chr5_141504986_+ | SINE | Alu | AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for PCDHGA12 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PCDHGA12 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for PCDHGA12 |
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The effects of the RNA editing to the miRNA binding sites for PCDHGA12 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for PCDHGA12 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for PCDHGA12 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for PCDHGA12 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for PCDHGA12 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for PCDHGA12 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PCDHGA12 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |