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Editing gene: MMACHC (CAeditome ID:25974)

Gene summary for MMACHC

Gene summary

Gene information	Gene symbol	MMACHC
	Gene ID	25974
	Gene name	metabolism of cobalamin associated C
	Synonyms	cblC
	Cytomap	1p34.1
	Type of gene	protein-coding
	Description	cyanocobalamin reductase / alkylcobalamin dealkylasealkylcobalamin:glutathione S-alkyltransferasecyanocobalamin reductase (cyanide-eliminating)methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuriamethylmalonic aciduria and homoc
	Modification date	20210518
	UniProtAcc	Q9Y4U1
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
MMACHC	GO:0016491	Cyanocobalamin reductase / alkylcobalamin dealkylase	19801555
MMACHC	GO:0032451	Cyanocobalamin reductase / alkylcobalamin dealkylase	19801555
MMACHC	GO:0033787	Cyanocobalamin reductase / alkylcobalamin dealkylase	19700356
MMACHC	GO:0043295	Cyanocobalamin reductase / alkylcobalamin dealkylase	22642810
MMACHC	GO:0071949	Cyanocobalamin reductase / alkylcobalamin dealkylase	19700356
MMACHC	GO:0006749	Cyanocobalamin reductase / alkylcobalamin dealkylase	19801555
MMACHC	GO:0006749	Cyanocobalamin reductase / alkylcobalamin dealkylase	22642810
MMACHC	GO:0009235	Cyanocobalamin reductase / alkylcobalamin dealkylase	19700356
MMACHC	GO:0009235	Cyanocobalamin reductase / alkylcobalamin dealkylase	22642810
MMACHC	GO:0070988	Cyanocobalamin reductase / alkylcobalamin dealkylase	19801555
MMACHC	GO:0005737	Cyanocobalamin reductase / alkylcobalamin dealkylase	23270877

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RNA A-to-I events for MMACHC

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000132763.13

RNA A-to-I editing events in Cancer.

CAediting_57396(45502339, +), CAediting_57397(45502844, +), CAediting_57398(45503497, +), CAediting_57399(45508804, +), CAediting_57400(45509433, +), CAediting_57401(45509437, +), CAediting_57402(45509439, +), CAediting_57403(45509453, +), CAediting_57404(45509464, +), CAediting_57405(45509469, +), CAediting_57406(45509475, +), CAediting_57407(45509477, +), CAediting_57408(45509488, +), CAediting_57409(45509493, +), CAediting_57410(45509513, +), CAediting_57411(45509517, +), CAediting_57412(45509518, +), CAediting_57413(45509521, +), CAediting_57414(45509530, +), CAediting_57415(45509539, +), CAediting_57416(45509542, +), CAediting_57417(45509549, +), CAediting_57418(45509552, +), CAediting_57419(45509554, +), CAediting_57420(45509568, +), CAediting_57421(45509570, +), CAediting_57422(45509578, +), CAediting_57423(45509579, +), CAediting_57424(45509594, +), CAediting_57425(45509599, +), CAediting_57426(45509611, +), CAediting_57427(45509614, +), CAediting_57428(45509616, +), CAediting_57429(45509623, +), CAediting_57430(45509635, +), CAediting_57431(45509636, +), CAediting_57432(45509643, +), CAediting_57433(45509651, +), CAediting_57434(45509655, +), CAediting_57435(45509672, +), CAediting_57436(45509673, +), CAediting_57437(45509674, +), CAediting_57438(45509683, +), CAediting_57439(45509686, +), CAediting_57440(45509688, +), CAediting_57441(45509691, +), CAediting_57442(45509692, +), CAediting_57443(45509826, +), CAediting_57444(45509827, +), CAediting_57445(45509832, +), CAediting_57446(45509835, +), CAediting_57447(45509843, +), CAediting_57448(45509853, +), CAediting_57449(45509862, +), CAediting_57450(45509865, +), CAediting_57451(45509871, +), CAediting_57452(45509877, +), CAediting_57453(45509879, +), CAediting_57454(45509882, +), CAediting_57455(45509891, +), CAediting_57456(45509894, +), CAediting_57457(45509896, +), CAediting_57458(45509900, +), CAediting_57459(45509901, +), CAediting_57460(45509902, +), CAediting_57461(45509916, +), CAediting_57462(45509918, +), CAediting_57463(45509919, +), CAediting_57464(45509920, +), CAediting_57465(45509925, +), CAediting_57466(45509926, +), CAediting_57467(45509930, +), CAediting_57468(45509943, +), CAediting_57469(45509948, +), CAediting_57470(45509956, +), CAediting_57471(45509962, +), CAediting_57472(45509966, +), CAediting_57473(45509970, +), CAediting_57474(45509983, +), CAediting_57475(45509986, +), CAediting_57476(45509989, +), CAediting_57477(45509992, +), CAediting_57478(45509997, +), CAediting_57479(45509998, +), CAediting_57480(45510005, +), CAediting_57481(45510009, +), CAediting_57482(45510011, +), CAediting_57483(45510013, +), CAediting_57484(45510018, +), CAediting_57485(45510022, +), CAediting_57486(45510027, +), CAediting_57487(45510034, +), CAediting_57488(45510042, +), CAediting_57489(45510059, +), CAediting_57490(45510065, +), CAediting_57491(45510067, +), CAediting_57492(45510082, +), CAediting_57493(45510083, +), CAediting_57494(45510085, +), CAediting_57495(45510086, +), CAediting_57496(45510334, +), CAediting_57497(45510418, +), CAediting_57498(45510422, +), CAediting_57499(45510434, +), CAediting_57500(45510440, +), CAediting_57501(45510441, +), CAediting_57502(45510446, +), CAediting_57503(45510457, +), CAediting_57504(45510472, +), CAediting_57505(45510489, +), CAediting_57506(45510493, +), CAediting_57507(45510513, +),

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RNA editing positional annotations for MMACHC using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_57396	chr1_45502339_+	intronic
CAediting_57397	chr1_45502844_+	intronic
CAediting_57398	chr1_45503497_+	intronic
CAediting_57399	chr1_45508804_+	exonic
CAediting_57400	chr1_45509433_+	ncRNA_exonic
CAediting_57401	chr1_45509437_+	ncRNA_exonic
CAediting_57402	chr1_45509439_+	ncRNA_exonic
CAediting_57403	chr1_45509453_+	ncRNA_exonic
CAediting_57404	chr1_45509464_+	ncRNA_exonic
CAediting_57405	chr1_45509469_+	ncRNA_exonic
CAediting_57406	chr1_45509475_+	ncRNA_exonic
CAediting_57407	chr1_45509477_+	ncRNA_exonic
CAediting_57408	chr1_45509488_+	ncRNA_exonic
CAediting_57409	chr1_45509493_+	ncRNA_exonic
CAediting_57410	chr1_45509513_+	ncRNA_intronic
CAediting_57411	chr1_45509517_+	ncRNA_intronic
CAediting_57412	chr1_45509518_+	ncRNA_intronic
CAediting_57413	chr1_45509521_+	ncRNA_intronic
CAediting_57414	chr1_45509530_+	ncRNA_intronic
CAediting_57415	chr1_45509539_+	ncRNA_intronic
CAediting_57416	chr1_45509542_+	ncRNA_intronic
CAediting_57417	chr1_45509549_+	ncRNA_intronic
CAediting_57418	chr1_45509552_+	ncRNA_intronic
CAediting_57419	chr1_45509554_+	ncRNA_intronic
CAediting_57420	chr1_45509568_+	ncRNA_intronic
CAediting_57421	chr1_45509570_+	ncRNA_intronic
CAediting_57422	chr1_45509578_+	ncRNA_intronic
CAediting_57423	chr1_45509579_+	ncRNA_intronic
CAediting_57424	chr1_45509594_+	ncRNA_intronic
CAediting_57425	chr1_45509599_+	ncRNA_intronic
CAediting_57426	chr1_45509611_+	ncRNA_intronic
CAediting_57427	chr1_45509614_+	ncRNA_intronic
CAediting_57428	chr1_45509616_+	ncRNA_intronic
CAediting_57429	chr1_45509623_+	ncRNA_intronic
CAediting_57430	chr1_45509635_+	ncRNA_intronic
CAediting_57431	chr1_45509636_+	ncRNA_intronic
CAediting_57432	chr1_45509643_+	ncRNA_intronic
CAediting_57433	chr1_45509651_+	ncRNA_intronic
CAediting_57434	chr1_45509655_+	ncRNA_intronic
CAediting_57435	chr1_45509672_+	ncRNA_intronic
CAediting_57436	chr1_45509673_+	ncRNA_intronic
CAediting_57437	chr1_45509674_+	ncRNA_intronic
CAediting_57438	chr1_45509683_+	ncRNA_intronic
CAediting_57439	chr1_45509686_+	ncRNA_intronic
CAediting_57440	chr1_45509688_+	ncRNA_intronic
CAediting_57441	chr1_45509691_+	ncRNA_intronic
CAediting_57442	chr1_45509692_+	ncRNA_intronic
CAediting_57443	chr1_45509826_+	ncRNA_intronic
CAediting_57444	chr1_45509827_+	ncRNA_intronic
CAediting_57445	chr1_45509832_+	ncRNA_intronic
CAediting_57446	chr1_45509835_+	ncRNA_intronic
CAediting_57447	chr1_45509843_+	ncRNA_intronic
CAediting_57448	chr1_45509853_+	ncRNA_intronic
CAediting_57449	chr1_45509862_+	ncRNA_intronic
CAediting_57450	chr1_45509865_+	ncRNA_intronic
CAediting_57451	chr1_45509871_+	ncRNA_intronic
CAediting_57452	chr1_45509877_+	ncRNA_intronic
CAediting_57453	chr1_45509879_+	ncRNA_intronic
CAediting_57454	chr1_45509882_+	ncRNA_intronic
CAediting_57455	chr1_45509891_+	ncRNA_intronic
CAediting_57456	chr1_45509894_+	ncRNA_intronic
CAediting_57457	chr1_45509896_+	ncRNA_intronic
CAediting_57458	chr1_45509900_+	ncRNA_intronic
CAediting_57459	chr1_45509901_+	ncRNA_intronic
CAediting_57460	chr1_45509902_+	ncRNA_intronic
CAediting_57461	chr1_45509916_+	ncRNA_intronic
CAediting_57462	chr1_45509918_+	ncRNA_intronic
CAediting_57463	chr1_45509919_+	ncRNA_intronic
CAediting_57464	chr1_45509920_+	ncRNA_intronic
CAediting_57465	chr1_45509925_+	ncRNA_intronic
CAediting_57466	chr1_45509926_+	ncRNA_intronic
CAediting_57467	chr1_45509930_+	ncRNA_intronic
CAediting_57468	chr1_45509943_+	ncRNA_intronic
CAediting_57469	chr1_45509948_+	ncRNA_intronic
CAediting_57470	chr1_45509956_+	ncRNA_intronic
CAediting_57471	chr1_45509962_+	ncRNA_intronic
CAediting_57472	chr1_45509966_+	ncRNA_intronic
CAediting_57473	chr1_45509970_+	ncRNA_intronic
CAediting_57474	chr1_45509983_+	ncRNA_exonic
CAediting_57475	chr1_45509986_+	ncRNA_exonic
CAediting_57476	chr1_45509989_+	ncRNA_exonic
CAediting_57477	chr1_45509992_+	ncRNA_exonic
CAediting_57478	chr1_45509997_+	ncRNA_exonic
CAediting_57479	chr1_45509998_+	ncRNA_exonic
CAediting_57480	chr1_45510005_+	ncRNA_exonic
CAediting_57481	chr1_45510009_+	ncRNA_exonic
CAediting_57482	chr1_45510011_+	ncRNA_exonic
CAediting_57483	chr1_45510013_+	ncRNA_exonic
CAediting_57484	chr1_45510018_+	ncRNA_exonic
CAediting_57485	chr1_45510022_+	ncRNA_exonic
CAediting_57486	chr1_45510027_+	ncRNA_exonic
CAediting_57487	chr1_45510034_+	ncRNA_exonic
CAediting_57488	chr1_45510042_+	ncRNA_exonic
CAediting_57489	chr1_45510059_+	ncRNA_exonic
CAediting_57490	chr1_45510065_+	ncRNA_exonic
CAediting_57491	chr1_45510067_+	ncRNA_exonic
CAediting_57492	chr1_45510082_+	ncRNA_exonic
CAediting_57493	chr1_45510083_+	ncRNA_exonic
CAediting_57494	chr1_45510085_+	ncRNA_exonic
CAediting_57495	chr1_45510086_+	ncRNA_exonic
CAediting_57496	chr1_45510334_+	ncRNA_exonic
CAediting_57497	chr1_45510418_+	ncRNA_exonic
CAediting_57498	chr1_45510422_+	ncRNA_exonic
CAediting_57499	chr1_45510434_+	ncRNA_exonic
CAediting_57500	chr1_45510440_+	ncRNA_exonic
CAediting_57501	chr1_45510441_+	ncRNA_exonic
CAediting_57502	chr1_45510446_+	ncRNA_exonic
CAediting_57503	chr1_45510457_+	ncRNA_exonic
CAediting_57504	chr1_45510472_+	ncRNA_exonic
CAediting_57505	chr1_45510489_+	ncRNA_exonic
CAediting_57506	chr1_45510493_+	ncRNA_exonic
CAediting_57507	chr1_45510513_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_57396	chr1_45502339_+	SINE	Alu	AluJr
CAediting_57397	chr1_45502844_+	SINE	Alu	AluSp
CAediting_57398	chr1_45503497_+	SINE	Alu	AluSx
CAediting_57400	chr1_45509433_+	SINE	Alu	AluSg7
CAediting_57401	chr1_45509437_+	SINE	Alu	AluSg7
CAediting_57402	chr1_45509439_+	SINE	Alu	AluSg7
CAediting_57403	chr1_45509453_+	SINE	Alu	AluSg7
CAediting_57404	chr1_45509464_+	SINE	Alu	AluSg7
CAediting_57405	chr1_45509469_+	SINE	Alu	AluSg7
CAediting_57406	chr1_45509475_+	SINE	Alu	AluSg7
CAediting_57407	chr1_45509477_+	SINE	Alu	AluSg7
CAediting_57408	chr1_45509488_+	SINE	Alu	AluSg7
CAediting_57409	chr1_45509493_+	SINE	Alu	AluSg7
CAediting_57410	chr1_45509513_+	SINE	Alu	AluSg7
CAediting_57411	chr1_45509517_+	SINE	Alu	AluSg7
CAediting_57412	chr1_45509518_+	SINE	Alu	AluSg7
CAediting_57413	chr1_45509521_+	SINE	Alu	AluSg7
CAediting_57414	chr1_45509530_+	SINE	Alu	AluSg7
CAediting_57415	chr1_45509539_+	SINE	Alu	AluSg7
CAediting_57416	chr1_45509542_+	SINE	Alu	AluSg7
CAediting_57417	chr1_45509549_+	SINE	Alu	AluSg7
CAediting_57418	chr1_45509552_+	SINE	Alu	AluSg7
CAediting_57419	chr1_45509554_+	SINE	Alu	AluSg7
CAediting_57420	chr1_45509568_+	SINE	Alu	AluSg7
CAediting_57421	chr1_45509570_+	SINE	Alu	AluSg7
CAediting_57422	chr1_45509578_+	SINE	Alu	AluSg7
CAediting_57423	chr1_45509579_+	SINE	Alu	AluSg7
CAediting_57424	chr1_45509594_+	SINE	Alu	AluSg7
CAediting_57425	chr1_45509599_+	SINE	Alu	AluSg7
CAediting_57426	chr1_45509611_+	SINE	Alu	AluSg7
CAediting_57427	chr1_45509614_+	SINE	Alu	AluSg7
CAediting_57428	chr1_45509616_+	SINE	Alu	AluSg7
CAediting_57429	chr1_45509623_+	SINE	Alu	AluSg7
CAediting_57430	chr1_45509635_+	SINE	Alu	AluSg7
CAediting_57431	chr1_45509636_+	SINE	Alu	AluSg7
CAediting_57432	chr1_45509643_+	SINE	Alu	AluSg7
CAediting_57433	chr1_45509651_+	SINE	Alu	AluSg7
CAediting_57434	chr1_45509655_+	SINE	Alu	AluSg7
CAediting_57435	chr1_45509672_+	SINE	Alu	AluSg7
CAediting_57436	chr1_45509673_+	SINE	Alu	AluSg7
CAediting_57437	chr1_45509674_+	SINE	Alu	AluSg7
CAediting_57438	chr1_45509683_+	SINE	Alu	AluSg7
CAediting_57439	chr1_45509686_+	SINE	Alu	AluSg7
CAediting_57440	chr1_45509688_+	SINE	Alu	AluSg7
CAediting_57441	chr1_45509691_+	SINE	Alu	AluSg7
CAediting_57442	chr1_45509692_+	SINE	Alu	AluSg7
CAediting_57443	chr1_45509826_+	SINE	Alu	AluSx4
CAediting_57444	chr1_45509827_+	SINE	Alu	AluSx4
CAediting_57445	chr1_45509832_+	SINE	Alu	AluSx4
CAediting_57446	chr1_45509835_+	SINE	Alu	AluSx4
CAediting_57447	chr1_45509843_+	SINE	Alu	AluSx4
CAediting_57448	chr1_45509853_+	SINE	Alu	AluSx4
CAediting_57449	chr1_45509862_+	SINE	Alu	AluSx4
CAediting_57450	chr1_45509865_+	SINE	Alu	AluSx4
CAediting_57451	chr1_45509871_+	SINE	Alu	AluSx4
CAediting_57452	chr1_45509877_+	SINE	Alu	AluSx4
CAediting_57453	chr1_45509879_+	SINE	Alu	AluSx4
CAediting_57454	chr1_45509882_+	SINE	Alu	AluSx4
CAediting_57455	chr1_45509891_+	SINE	Alu	AluSx4
CAediting_57456	chr1_45509894_+	SINE	Alu	AluSx4
CAediting_57457	chr1_45509896_+	SINE	Alu	AluSx4
CAediting_57458	chr1_45509900_+	SINE	Alu	AluSx4
CAediting_57459	chr1_45509901_+	SINE	Alu	AluSx4
CAediting_57460	chr1_45509902_+	SINE	Alu	AluSx4
CAediting_57461	chr1_45509916_+	SINE	Alu	AluSx4
CAediting_57462	chr1_45509918_+	SINE	Alu	AluSx4
CAediting_57463	chr1_45509919_+	SINE	Alu	AluSx4
CAediting_57464	chr1_45509920_+	SINE	Alu	AluSx4
CAediting_57465	chr1_45509925_+	SINE	Alu	AluSx4
CAediting_57466	chr1_45509926_+	SINE	Alu	AluSx4
CAediting_57467	chr1_45509930_+	SINE	Alu	AluSx4
CAediting_57468	chr1_45509943_+	SINE	Alu	AluSx4
CAediting_57469	chr1_45509948_+	SINE	Alu	AluSx4
CAediting_57470	chr1_45509956_+	SINE	Alu	AluSx4
CAediting_57471	chr1_45509962_+	SINE	Alu	AluSx4
CAediting_57472	chr1_45509966_+	SINE	Alu	AluSx4
CAediting_57473	chr1_45509970_+	SINE	Alu	AluSx4
CAediting_57474	chr1_45509983_+	SINE	Alu	AluSx4
CAediting_57475	chr1_45509986_+	SINE	Alu	AluSx4
CAediting_57476	chr1_45509989_+	SINE	Alu	AluSx4
CAediting_57477	chr1_45509992_+	SINE	Alu	AluSx4
CAediting_57478	chr1_45509997_+	SINE	Alu	AluSx4
CAediting_57479	chr1_45509998_+	SINE	Alu	AluSx4
CAediting_57480	chr1_45510005_+	SINE	Alu	AluSx4
CAediting_57481	chr1_45510009_+	SINE	Alu	AluSx4
CAediting_57482	chr1_45510011_+	SINE	Alu	AluSx4
CAediting_57483	chr1_45510013_+	SINE	Alu	AluSx4
CAediting_57484	chr1_45510018_+	SINE	Alu	AluSx4
CAediting_57485	chr1_45510022_+	SINE	Alu	AluSx4
CAediting_57486	chr1_45510027_+	SINE	Alu	AluSx4
CAediting_57487	chr1_45510034_+	SINE	Alu	AluSx4
CAediting_57488	chr1_45510042_+	SINE	Alu	AluSx4
CAediting_57489	chr1_45510059_+	SINE	Alu	AluSx4
CAediting_57490	chr1_45510065_+	SINE	Alu	AluSx4
CAediting_57491	chr1_45510067_+	SINE	Alu	AluSx4
CAediting_57492	chr1_45510082_+	SINE	Alu	AluSx4
CAediting_57493	chr1_45510083_+	SINE	Alu	AluSx4
CAediting_57494	chr1_45510085_+	SINE	Alu	AluSx4
CAediting_57495	chr1_45510086_+	SINE	Alu	AluSx4
CAediting_57497	chr1_45510418_+	SINE	Alu	AluJr
CAediting_57498	chr1_45510422_+	SINE	Alu	AluJr
CAediting_57499	chr1_45510434_+	SINE	Alu	AluJr
CAediting_57500	chr1_45510440_+	SINE	Alu	AluJr
CAediting_57501	chr1_45510441_+	SINE	Alu	AluJr
CAediting_57502	chr1_45510446_+	SINE	Alu	AluJr
CAediting_57503	chr1_45510457_+	SINE	Alu	AluJr
CAediting_57504	chr1_45510472_+	SINE	Alu	AluJr
CAediting_57505	chr1_45510489_+	SINE	Alu	AluJr
CAediting_57506	chr1_45510493_+	SINE	Alu	AluJr
CAediting_57507	chr1_45510513_+	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for MMACHC

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_57410	chr1_45509513_+	45509506:45509514	5SS	0+5i	TGGGTTCAA	-10.77	TGGGTTCGA	-3.14
IR	CAediting_57470	chr1_45509956_+	45509954:45509976	3SS	0+18i	GTAGTCCCAGCTACTCAGGAGGC	-34.13	GTGGTCCCAGCTACTCAGGAGGC	-32.28
IR	CAediting_57471	chr1_45509962_+	45509954:45509976	3SS	0+12i	GTAGTCCCAGCTACTCAGGAGGC	-34.13	GTAGTCCCGGCTACTCAGGAGGC	-30.03
IR	CAediting_57472	chr1_45509966_+	45509954:45509976	3SS	0+8i	GTAGTCCCAGCTACTCAGGAGGC	-34.13	GTAGTCCCAGCTGCTCAGGAGGC	-33.16
IR	CAediting_57473	chr1_45509970_+	45509954:45509976	3SS	0+4i	GTAGTCCCAGCTACTCAGGAGGC	-34.13	GTAGTCCCAGCTACTCGGGAGGC	-34.47

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000132763.13.MMACHC.

Correlation between RNA A-to-I editing and PSI for ENSG00000132763.13.MMACHC.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MMACHC

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LGG.CAediting_57479.ENSG00000132763.MMACHC.png
Soverview

LIHC.CAediting_57436.ENSG00000132763.MMACHC.png
Soverview

OV.CAediting_57422.ENSG00000132763.MMACHC.png
Soverview

THYM.CAediting_57479.ENSG00000132763.MMACHC.png
Soverview

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Protein coding region RNA A-to-I editings for MMACHC

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for MMACHC

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_57406	chr1_45509475_+	ENSG00000132763.13	ENST00000401061	hsa-miR-191-3p	45509472	45509477	6mer	45509455	45509478	143.00	-23.96
CAediting_57413	chr1_45509521_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3166	45509519	45509525	7mer-m8	45509504	45509526	154.00	-18.06
CAediting_57413	chr1_45509521_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7849-3p	45509515	45509521	7mer-m8	45509500	45509522	166.00	-21.86
CAediting_57416	chr1_45509542_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4691-3p	45509539	45509545	7mer-m8	45509519	45509546	150.00	-26.73
CAediting_57418	chr1_45509552_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4722-3p	45509549	45509555	7mer-m8	45509537	45509556	145.00	-23.37
CAediting_57418	chr1_45509552_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4769-3p	45509548	45509554	7mer-m8	45509534	45509555	159.00	-21.65
CAediting_57418	chr1_45509552_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6727-3p	45509549	45509555	7mer-m8	45509537	45509556	150.00	-20.51
CAediting_57418	chr1_45509552_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6817-5p	45509548	45509554	7mer-m8	45509529	45509555	147.00	-25.38
CAediting_57420	chr1_45509568_+	ENSG00000132763.13	ENST00000401061	hsa-miR-143-5p	45509564	45509570	7mer-m8	45509548	45509571	158.00	-24.72
CAediting_57420	chr1_45509568_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5693	45509561	45509567	7mer-m8	45509547	45509568	140.00	-19.15
CAediting_57422	chr1_45509578_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3157-5p	45509572	45509578	7mer-m8	45509556	45509579	169.00	-27.24
CAediting_57422	chr1_45509578_+	ENSG00000132763.13	ENST00000401061	hsa-miR-34a-3p	45509574	45509580	7mer-m8	45509559	45509581	159.00	-9.31
CAediting_57431	chr1_45509636_+	ENSG00000132763.13	ENST00000401061	hsa-miR-28-5p	45509634	45509640	7mer-m8	45509621	45509641	151.00	-18.70
CAediting_57431	chr1_45509636_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3139	45509634	45509640	7mer-m8	45509619	45509641	165.00	-23.25
CAediting_57431	chr1_45509636_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4633-3p	45509633	45509639	7mer-m8	45509616	45509640	146.00	-21.78
CAediting_57431	chr1_45509636_+	ENSG00000132763.13	ENST00000401061	hsa-miR-610	45509632	45509638	7mer-m8	45509618	45509639	154.00	-16.27
CAediting_57431	chr1_45509636_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6500-5p	45509633	45509639	7mer-m8	45509615	45509640	147.00	-21.92
CAediting_57431	chr1_45509636_+	ENSG00000132763.13	ENST00000401061	hsa-miR-708-5p	45509634	45509640	7mer-m8	45509620	45509641	154.00	-22.05
CAediting_57433	chr1_45509651_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3138	45509650	45509655	6mer	45509633	45509656	141.00	-32.08
CAediting_57433	chr1_45509651_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4776-5p	45509648	45509654	7mer-m8	45509634	45509655	164.00	-27.73
CAediting_57433	chr1_45509651_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4776-5p	45509648	45509654	7mer-m8	45509634	45509655	164.00	-27.73
CAediting_57433	chr1_45509651_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4800-5p	45509649	45509655	7mer-m8	45509633	45509656	155.00	-24.83
CAediting_57435	chr1_45509672_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6771-5p	45509666	45509673	8mer-1a	45509652	45509673	155.00	-26.64
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3192-5p	45509666	45509673	8mer-1a	45509650	45509673	152.00	-28.02
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-326	45509668	45509674	7mer-m8	45509656	45509675	140.00	-14.14
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-330-5p	45509668	45509674	7mer-m8	45509654	45509675	140.00	-19.02
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4314	45509667	45509673	7mer-m8	45509657	45509674	140.00	-19.14
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4522	45509670	45509676	7mer-m8	45509660	45509677	151.00	-21.00
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-514a-5p	45509669	45509675	7mer-m8	45509656	45509676	154.00	-18.58
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-514a-5p	45509669	45509675	7mer-m8	45509656	45509676	154.00	-18.58
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-514a-5p	45509669	45509675	7mer-m8	45509656	45509676	154.00	-18.58
CAediting_57437	chr1_45509674_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3189-3p	45509668	45509674	7mer-m8	45509651	45509675	147.00	-24.20
CAediting_57437	chr1_45509674_+	ENSG00000132763.13	ENST00000401061	hsa-miR-659-5p	45509671	45509677	7mer-m8	45509658	45509678	146.00	-21.67
CAediting_57437	chr1_45509674_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6813-3p	45509669	45509675	7mer-m8	45509656	45509676	140.00	-11.95
CAediting_57442	chr1_45509692_+	ENSG00000132763.13	ENST00000401061	hsa-miR-483-3p	45509687	45509694	8mer-1a	45509674	45509694	157.00	-21.42
CAediting_57443	chr1_45509826_+	ENSG00000132763.13	ENST00000401061	hsa-miR-513a-5p	45509820	45509826	7mer-m8	45509810	45509827	152.00	-20.34
CAediting_57443	chr1_45509826_+	ENSG00000132763.13	ENST00000401061	hsa-miR-513a-5p	45509820	45509826	7mer-m8	45509810	45509827	152.00	-20.34
CAediting_57443	chr1_45509826_+	ENSG00000132763.13	ENST00000401061	hsa-miR-638	45509825	45509831	7mer-1a	45509807	45509831	167.00	-42.95
CAediting_57444	chr1_45509827_+	ENSG00000132763.13	ENST00000401061	hsa-miR-8052	45509825	45509831	7mer-1a	45509810	45509831	141.00	-24.50
CAediting_57445	chr1_45509832_+	ENSG00000132763.13	ENST00000401061	hsa-miR-371a-3p	45509830	45509836	7mer-m8	45509815	45509837	144.00	-13.78
CAediting_57447	chr1_45509843_+	ENSG00000132763.13	ENST00000401061	hsa-miR-10392-3p	45509841	45509848	8mer-1a	45509824	45509848	144.00	-24.04
CAediting_57447	chr1_45509843_+	ENSG00000132763.13	ENST00000401061	hsa-miR-361-3p	45509837	45509843	7mer-m8	45509824	45509844	153.00	-25.10
CAediting_57453	chr1_45509879_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3176	45509876	45509882	7mer-m8	45509863	45509883	156.00	-22.90
CAediting_57453	chr1_45509879_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3922-3p	45509876	45509882	7mer-m8	45509861	45509883	165.00	-25.48
CAediting_57453	chr1_45509879_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6878-3p	45509875	45509881	7mer-m8	45509862	45509882	147.00	-23.30
CAediting_57456	chr1_45509894_+	ENSG00000132763.13	ENST00000401061	hsa-miR-20a-3p	45509890	45509896	7mer-m8	45509876	45509897	140.00	-11.91
CAediting_57456	chr1_45509894_+	ENSG00000132763.13	ENST00000401061	hsa-miR-217-5p	45509891	45509897	7mer-m8	45509874	45509898	144.00	-19.69
CAediting_57456	chr1_45509894_+	ENSG00000132763.13	ENST00000401061	hsa-miR-33a-5p	45509889	45509895	7mer-m8	45509876	45509896	140.00	-10.70
CAediting_57456	chr1_45509894_+	ENSG00000132763.13	ENST00000401061	hsa-miR-33b-5p	45509889	45509895	7mer-m8	45509877	45509896	140.00	-10.75
CAediting_57456	chr1_45509894_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6807-3p	45509891	45509897	7mer-m8	45509874	45509898	159.00	-22.66
CAediting_57458	chr1_45509900_+	ENSG00000132763.13	ENST00000401061	hsa-miR-23a-5p	45509898	45509904	7mer-m8	45509884	45509905	150.00	-21.85
CAediting_57458	chr1_45509900_+	ENSG00000132763.13	ENST00000401061	hsa-miR-23b-5p	45509898	45509904	7mer-m8	45509876	45509905	142.00	-22.32
CAediting_57458	chr1_45509900_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6509-3p	45509894	45509901	8mer-1a	45509880	45509901	140.00	-13.78
CAediting_57459	chr1_45509901_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1304-3p	45509894	45509901	8mer-1a	45509880	45509901	150.00	-20.12
CAediting_57460	chr1_45509902_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4508	45509900	45509906	7mer-m8	45509891	45509907	140.00	-21.04
CAediting_57460	chr1_45509902_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6837-3p	45509895	45509901	7mer-m8	45509877	45509902	155.00	-20.70
CAediting_57461	chr1_45509916_+	ENSG00000132763.13	ENST00000401061	hsa-miR-222-5p	45509910	45509917	8mer-1a	45509896	45509917	140.00	-9.13
CAediting_57461	chr1_45509916_+	ENSG00000132763.13	ENST00000401061	hsa-miR-30a-3p	45509912	45509919	8mer-1a	45509895	45509919	150.00	-12.23
CAediting_57461	chr1_45509916_+	ENSG00000132763.13	ENST00000401061	hsa-miR-30d-3p	45509912	45509919	8mer-1a	45509893	45509919	150.00	-16.61
CAediting_57461	chr1_45509916_+	ENSG00000132763.13	ENST00000401061	hsa-miR-30e-3p	45509912	45509919	8mer-1a	45509895	45509919	150.00	-14.38
CAediting_57461	chr1_45509916_+	ENSG00000132763.13	ENST00000401061	hsa-miR-936	45509909	45509916	8mer-1a	45509894	45509916	159.00	-22.30
CAediting_57464	chr1_45509920_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4325	45509917	45509924	8mer-1a	45509907	45509924	143.00	-12.13
CAediting_57465	chr1_45509925_+	ENSG00000132763.13	ENST00000401061	hsa-miR-20a-3p	45509918	45509925	8mer-1a	45509904	45509925	151.00	-10.59
CAediting_57466	chr1_45509926_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3200-3p	45509921	45509927	7mer-m8	45509907	45509928	143.00	-11.73
CAediting_57466	chr1_45509926_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6841-3p	45509920	45509926	7mer-m8	45509907	45509927	147.00	-13.98
CAediting_57470	chr1_45509956_+	ENSG00000132763.13	ENST00000401061	hsa-miR-140-3p	45509951	45509957	7mer-m8	45509938	45509958	151.00	-18.59
CAediting_57470	chr1_45509956_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3619-3p	45509954	45509959	6mer	45509935	45509960	146.00	-34.19
CAediting_57472	chr1_45509966_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1207-3p	45509959	45509965	7mer-m8	45509948	45509966	145.00	-13.82
CAediting_57472	chr1_45509966_+	ENSG00000132763.13	ENST00000401061	hsa-miR-503-5p	45509962	45509967	6mer	45509943	45509968	144.00	-30.38
CAediting_57472	chr1_45509966_+	ENSG00000132763.13	ENST00000401061	hsa-miR-646	45509961	45509967	7mer-m8	45509949	45509968	148.00	-21.05
CAediting_57478	chr1_45509997_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3663-5p	45509996	45510001	6mer	45509982	45510002	146.00	-18.09
CAediting_57478	chr1_45509997_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7152-3p	45509995	45510001	7mer-m8	45509983	45510002	140.00	-16.13
CAediting_57479	chr1_45509998_+	ENSG00000132763.13	ENST00000401061	hsa-miR-149-5p	45509995	45510001	7mer-m8	45509979	45510002	151.00	-21.39
CAediting_57479	chr1_45509998_+	ENSG00000132763.13	ENST00000401061	hsa-miR-372-5p	45509991	45509997	7mer-m8	45509976	45509998	145.00	-12.33
CAediting_57480	chr1_45510005_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1913	45510003	45510010	8mer-1a	45509989	45510010	147.00	-21.73
CAediting_57480	chr1_45510005_+	ENSG00000132763.13	ENST00000401061	hsa-miR-331-3p	45509998	45510004	7mer-m8	45509985	45510005	141.00	-16.58
CAediting_57481	chr1_45510009_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1281	45510002	45510008	7mer-m8	45509993	45510009	141.00	-17.27
CAediting_57484	chr1_45510018_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6511b-3p	45510017	45510022	6mer	45510001	45510023	140.00	-26.30
CAediting_57484	chr1_45510018_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6511b-3p	45510017	45510022	6mer	45510001	45510023	140.00	-26.30
CAediting_57484	chr1_45510018_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6784-3p	45510017	45510022	6mer	45510001	45510023	151.00	-31.20
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-125a-5p	45510329	45510335	7mer-m8	45510313	45510336	147.00	-18.02
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-125b-5p	45510329	45510335	7mer-m8	45510315	45510336	147.00	-18.02
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-125b-5p	45510329	45510335	7mer-m8	45510315	45510336	147.00	-18.02
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-210-5p	45510331	45510337	7mer-m8	45510315	45510338	142.00	-17.51
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-331-3p	45510331	45510336	6mer	45510317	45510337	143.00	-27.50
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4319	45510329	45510335	7mer-m8	45510319	45510336	148.00	-18.89
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4649-3p	45510327	45510333	7mer-m8	45510314	45510334	145.00	-17.38
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-544b	45510328	45510334	7mer-m8	45510311	45510335	149.00	-16.40
CAediting_57499	chr1_45510434_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3937	45510432	45510437	6mer	45510416	45510438	143.00	-21.43
CAediting_57500	chr1_45510440_+	ENSG00000132763.13	ENST00000401061	hsa-miR-513a-5p	45510434	45510440	7mer-m8	45510424	45510441	152.00	-22.25
CAediting_57500	chr1_45510440_+	ENSG00000132763.13	ENST00000401061	hsa-miR-513a-5p	45510434	45510440	7mer-m8	45510424	45510441	152.00	-22.25
CAediting_57500	chr1_45510440_+	ENSG00000132763.13	ENST00000401061	hsa-miR-638	45510439	45510445	7mer-1a	45510421	45510445	157.00	-33.44
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-10a-5p	45509434	45509440	7mer-m8	45509419	45509441	141.00	-11.43
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-10b-5p	45509434	45509440	7mer-m8	45509419	45509441	149.00	-11.50
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-339-5p	45509433	45509439	7mer-m8	45509419	45509440	143.00	-14.31
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3667-5p	45509437	45509444	8mer-1a	45509422	45509444	155.00	-18.30
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4725-5p	45509435	45509441	7mer-m8	45509422	45509442	140.00	-15.96
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-504-5p	45509435	45509441	7mer-m8	45509422	45509442	149.00	-18.80
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5699-3p	45509432	45509438	7mer-m8	45509418	45509439	140.00	-16.12
CAediting_57403	chr1_45509453_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1273c	45509448	45509453	6mer	45509433	45509454	140.00	-26.13
CAediting_57415	chr1_45509539_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6764-5p	45509534	45509539	6mer	45509517	45509540	140.00	-23.81
CAediting_57415	chr1_45509539_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6840-3p	45509533	45509539	7mer-m8	45509518	45509540	150.00	-24.10
CAediting_57417	chr1_45509549_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6802-3p	45509545	45509551	7mer-m8	45509531	45509552	147.00	-18.22
CAediting_57417	chr1_45509549_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6879-3p	45509546	45509553	8mer-1a	45509531	45509553	151.00	-21.82
CAediting_57429	chr1_45509623_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3940-3p	45509620	45509626	7mer-m8	45509606	45509627	140.00	-22.76
CAediting_57432	chr1_45509643_+	ENSG00000132763.13	ENST00000401061	hsa-miR-665	45509636	45509642	7mer-m8	45509624	45509643	153.00	-23.28
CAediting_57434	chr1_45509655_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1228-5p	45509652	45509658	7mer-m8	45509637	45509659	146.00	-24.79
CAediting_57441	chr1_45509691_+	ENSG00000132763.13	ENST00000401061	hsa-miR-146b-3p	45509685	45509691	7mer-1a	45509670	45509691	147.00	-24.23
CAediting_57441	chr1_45509691_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6870-3p	45509689	45509695	7mer-m8	45509674	45509696	148.00	-21.99
CAediting_57469	chr1_45509948_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4747-3p	45509946	45509952	7mer-m8	45509932	45509953	164.00	-28.66
CAediting_57475	chr1_45509986_+	ENSG00000132763.13	ENST00000401061	hsa-miR-324-3p	45509980	45509987	8mer-1a	45509964	45509987	162.00	-27.27
CAediting_57475	chr1_45509986_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6509-3p	45509981	45509988	8mer-1a	45509967	45509988	161.00	-24.54
CAediting_57475	chr1_45509986_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6890-3p	45509979	45509985	7mer-m8	45509967	45509986	156.00	-27.71
CAediting_57485	chr1_45510022_+	ENSG00000132763.13	ENST00000401061	hsa-miR-324-3p	45510015	45510021	7mer-m8	45510003	45510022	145.00	-23.34
CAediting_57485	chr1_45510022_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6075	45510019	45510026	8mer-1a	45510008	45510026	146.00	-20.11
CAediting_57490	chr1_45510065_+	ENSG00000132763.13	ENST00000401061	hsa-miR-188-3p	45510060	45510066	7mer-m8	45510042	45510067	144.00	-17.80
CAediting_57490	chr1_45510065_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4433a-5p	45510061	45510067	7mer-m8	45510047	45510068	148.00	-20.46
CAediting_57490	chr1_45510065_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5588-3p	45510062	45510068	7mer-m8	45510052	45510069	155.00	-17.82
CAediting_57491	chr1_45510067_+	ENSG00000132763.13	ENST00000401061	hsa-miR-2114-3p	45510063	45510069	7mer-m8	45510050	45510070	148.00	-16.59
CAediting_57491	chr1_45510067_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6823-3p	45510063	45510069	7mer-m8	45510048	45510070	152.00	-23.83
CAediting_57502	chr1_45510446_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6787-5p	45510442	45510448	7mer-1a	45510427	45510448	146.00	-26.55
CAediting_57503	chr1_45510457_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3943	45510454	45510460	7mer-m8	45510439	45510461	140.00	-19.77
CAediting_57505	chr1_45510489_+	ENSG00000132763.13	ENST00000401061	hsa-miR-12113	45510487	45510494	8mer-1a	45510473	45510494	154.00	-19.92
CAediting_57505	chr1_45510489_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4539	45510487	45510494	8mer-1a	45510470	45510494	147.00	-20.98
CAediting_57505	chr1_45510489_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4680-5p	45510486	45510492	7mer-1a	45510472	45510492	140.00	-20.85
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548ae-3p	45509577	45509583	7mer-m8	45509563	45509584	143.00	-6.23
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548ae-3p	45509577	45509583	7mer-m8	45509563	45509584	143.00	-6.23
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548ah-3p	45509577	45509583	7mer-m8	45509561	45509584	145.00	-8.21
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548aj-3p	45509577	45509583	7mer-m8	45509563	45509584	143.00	-7.13
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548aj-3p	45509577	45509583	7mer-m8	45509563	45509584	143.00	-7.13
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548am-3p	45509577	45509583	7mer-m8	45509561	45509584	145.00	-7.48
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548aq-3p	45509577	45509583	7mer-m8	45509562	45509584	143.00	-6.23
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548j-3p	45509577	45509583	7mer-m8	45509564	45509584	141.00	-6.23
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548x-3p	45509577	45509583	7mer-m8	45509564	45509584	143.00	-7.13
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548x-3p	45509577	45509583	7mer-m8	45509564	45509584	143.00	-7.13
CAediting_57423	chr1_45509579_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7844-5p	45509575	45509581	7mer-m8	45509561	45509582	164.00	-20.45
CAediting_57482	chr1_45510011_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6747-3p	45510004	45510010	7mer-m8	45509991	45510011	156.00	-23.73
CAediting_57482	chr1_45510011_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6752-3p	45510005	45510012	8mer-1a	45509992	45510012	150.00	-24.19
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6720-3p	45510416	45510422	7mer-m8	45510401	45510423	154.00	-17.54
CAediting_57504	chr1_45510472_+	ENSG00000132763.13	ENST00000401061	hsa-miR-10392-3p	45510469	45510474	6mer	45510450	45510475	141.00	-37.19
CAediting_57504	chr1_45510472_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1470	45510465	45510471	7mer-m8	45510451	45510472	158.00	-37.00
CAediting_57504	chr1_45510472_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4290	45510466	45510472	7mer-m8	45510454	45510473	147.00	-23.95
CAediting_57504	chr1_45510472_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6851-3p	45510468	45510473	6mer	45510452	45510474	142.00	-30.12
CAediting_57507	chr1_45510513_+	ENSG00000132763.13	ENST00000401061	hsa-miR-96-3p	45510508	45510514	7mer-m8	45510498	45510515	143.00	-12.35

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_57500	chr1_45510440_+	ENSG00000132763.13	ENST00000401061	hsa-miR-10399-5p	45510435	45510441	7mer-m8	45510419	45510442	149	-15.29
CAediting_57501	chr1_45510441_+	ENSG00000132763.13	ENST00000401061	hsa-miR-10399-5p	45510435	45510441	7mer-m8	45510419	45510442	149	-15.29
CAediting_57443	chr1_45509826_+	ENSG00000132763.13	ENST00000401061	hsa-miR-10399-5p	45509821	45509827	7mer-m8	45509808	45509828	140	-9.22
CAediting_57444	chr1_45509827_+	ENSG00000132763.13	ENST00000401061	hsa-miR-10399-5p	45509821	45509827	7mer-m8	45509808	45509828	140	-9.22
CAediting_57473	chr1_45509970_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1200	45509966	45509972	7mer-m8	45509952	45509973	141	-18.61
CAediting_57406	chr1_45509475_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1227-3p	45509469	45509476	8mer-1a	45509457	45509476	148	-18.2
CAediting_57499	chr1_45510434_+	ENSG00000132763.13	ENST00000401061	hsa-miR-125a-3p	45510431	45510437	7mer-m8	45510417	45510438	149	-23.27
CAediting_57497	chr1_45510418_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1271-3p	45510416	45510422	7mer-m8	45510401	45510423	142	-21.06
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1271-3p	45510416	45510422	7mer-m8	45510401	45510423	142	-21.06
CAediting_57426	chr1_45509611_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1272	45509608	45509615	8mer-1a	45509592	45509615	148	-15.96
CAediting_57427	chr1_45509614_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1272	45509608	45509615	8mer-1a	45509592	45509615	148	-15.96
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-128-3p	45510420	45510426	7mer-m8	45510408	45510427	146	-20.28
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-128-3p	45510420	45510426	7mer-m8	45510408	45510427	146	-20.28
CAediting_57488	chr1_45510042_+	ENSG00000132763.13	ENST00000401061	hsa-miR-143-5p	45510037	45510042	6mer	45510021	45510043	151	-25.59
CAediting_57503	chr1_45510457_+	ENSG00000132763.13	ENST00000401061	hsa-miR-150-5p	45510451	45510457	7mer-m8	45510437	45510458	140	-12.95
CAediting_57506	chr1_45510493_+	ENSG00000132763.13	ENST00000401061	hsa-miR-152-5p	45510491	45510498	8mer-1a	45510477	45510498	145	-13.67
CAediting_57462	chr1_45509918_+	ENSG00000132763.13	ENST00000401061	hsa-miR-153-5p	45509915	45509921	7mer-m8	45509900	45509922	144	-8.17
CAediting_57463	chr1_45509919_+	ENSG00000132763.13	ENST00000401061	hsa-miR-153-5p	45509915	45509921	7mer-m8	45509900	45509922	144	-8.17
CAediting_57464	chr1_45509920_+	ENSG00000132763.13	ENST00000401061	hsa-miR-153-5p	45509915	45509921	7mer-m8	45509900	45509922	144	-8.17
CAediting_57469	chr1_45509948_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1539	45509943	45509949	7mer-m8	45509933	45509950	150	-25.96
CAediting_57469	chr1_45509948_+	ENSG00000132763.13	ENST00000401061	hsa-miR-191-3p	45509942	45509948	7mer-m8	45509927	45509949	146	-20.16
CAediting_57459	chr1_45509901_+	ENSG00000132763.13	ENST00000401061	hsa-miR-193b-5p	45509899	45509905	7mer-m8	45509885	45509906	142	-19.59
CAediting_57460	chr1_45509902_+	ENSG00000132763.13	ENST00000401061	hsa-miR-193b-5p	45509899	45509905	7mer-m8	45509885	45509906	142	-19.59
CAediting_57418	chr1_45509552_+	ENSG00000132763.13	ENST00000401061	hsa-miR-215-3p	45509548	45509554	7mer-m8	45509533	45509555	147	-21.35
CAediting_57419	chr1_45509554_+	ENSG00000132763.13	ENST00000401061	hsa-miR-215-3p	45509548	45509554	7mer-m8	45509533	45509555	147	-21.35
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-216a-3p	45510420	45510426	7mer-m8	45510409	45510427	144	-20.63
CAediting_57482	chr1_45510011_+	ENSG00000132763.13	ENST00000401061	hsa-miR-216b-5p	45510008	45510014	7mer-m8	45509994	45510015	150	-15.59
CAediting_57483	chr1_45510013_+	ENSG00000132763.13	ENST00000401061	hsa-miR-216b-5p	45510008	45510014	7mer-m8	45509994	45510015	150	-15.59
CAediting_57478	chr1_45509997_+	ENSG00000132763.13	ENST00000401061	hsa-miR-29b-1-5p	45509996	45510001	6mer	45509982	45510002	141	-15.02
CAediting_57479	chr1_45509998_+	ENSG00000132763.13	ENST00000401061	hsa-miR-29b-1-5p	45509996	45510001	6mer	45509982	45510002	141	-15.02
CAediting_57411	chr1_45509517_+	ENSG00000132763.13	ENST00000401061	hsa-miR-302f	45509513	45509520	8mer-1a	45509504	45509520	145	-10.96
CAediting_57412	chr1_45509518_+	ENSG00000132763.13	ENST00000401061	hsa-miR-302f	45509513	45509520	8mer-1a	45509504	45509520	145	-10.96
CAediting_57435	chr1_45509672_+	ENSG00000132763.13	ENST00000401061	hsa-miR-30b-3p	45509665	45509672	8mer-1a	45509649	45509672	149	-18.3
CAediting_57434	chr1_45509655_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3165	45509650	45509656	7mer-m8	45509635	45509657	148	-14.49
CAediting_57497	chr1_45510418_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3190-5p	45510412	45510418	7mer-m8	45510399	45510419	148	-21.18
CAediting_57429	chr1_45509623_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3190-5p	45509617	45509623	7mer-m8	45509606	45509624	144	-16.24
CAediting_57405	chr1_45509469_+	ENSG00000132763.13	ENST00000401061	hsa-miR-324-3p	45509466	45509472	7mer-m8	45509449	45509473	147	-22.82
CAediting_57490	chr1_45510065_+	ENSG00000132763.13	ENST00000401061	hsa-miR-342-3p	45510059	45510066	8mer-1a	45510045	45510066	148	-22.32
CAediting_57453	chr1_45509879_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3663-5p	45509876	45509882	7mer-m8	45509863	45509883	140	-24.99
CAediting_57454	chr1_45509882_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3663-5p	45509876	45509882	7mer-m8	45509863	45509883	140	-24.99
CAediting_57401	chr1_45509437_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3664-5p	45509434	45509440	7mer-m8	45509420	45509441	150	-14.83
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3664-5p	45509434	45509440	7mer-m8	45509420	45509441	150	-14.83
CAediting_57425	chr1_45509599_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3675-3p	45509595	45509601	7mer-m8	45509581	45509602	145	-12.58
CAediting_57465	chr1_45509925_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3680-3p	45509919	45509925	7mer-m8	45509904	45509926	140	-14.39
CAediting_57466	chr1_45509926_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3680-3p	45509919	45509925	7mer-m8	45509904	45509926	140	-14.39
CAediting_57465	chr1_45509925_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3680-3p	45509919	45509925	7mer-m8	45509904	45509926	140	-14.39
CAediting_57466	chr1_45509926_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3680-3p	45509919	45509925	7mer-m8	45509904	45509926	140	-14.39
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3681-3p	45510420	45510426	7mer-m8	45510406	45510427	153	-19.36
CAediting_57435	chr1_45509672_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3689a-3p	45509665	45509672	8mer-1a	45509651	45509672	149	-21.92
CAediting_57435	chr1_45509672_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3689b-3p	45509665	45509672	8mer-1a	45509651	45509672	149	-21.97
CAediting_57435	chr1_45509672_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3689c	45509665	45509672	8mer-1a	45509651	45509672	149	-21.97
CAediting_57452	chr1_45509877_+	ENSG00000132763.13	ENST00000401061	hsa-miR-371a-5p	45509871	45509878	8mer-1a	45509859	45509878	145	-13.49
CAediting_57409	chr1_45509493_+	ENSG00000132763.13	ENST00000401061	hsa-miR-377-5p	45509491	45509497	7mer-m8	45509477	45509498	155	-18.38
CAediting_57414	chr1_45509530_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3929	45509527	45509533	7mer-m8	45509512	45509534	153	-19.03
CAediting_57421	chr1_45509570_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3934-5p	45509567	45509573	7mer-m8	45509555	45509574	149	-23.88
CAediting_57488	chr1_45510042_+	ENSG00000132763.13	ENST00000401061	hsa-miR-3944-5p	45510036	45510042	7mer-m8	45510023	45510043	149	-15.96
CAediting_57405	chr1_45509469_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4252	45509467	45509474	8mer-1a	45509454	45509474	149	-22.82
CAediting_57485	chr1_45510022_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4284	45510018	45510024	7mer-m8	45510008	45510025	144	-12.71
CAediting_57430	chr1_45509635_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4424	45509632	45509638	7mer-m8	45509616	45509639	143	-12.87
CAediting_57431	chr1_45509636_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4424	45509632	45509638	7mer-m8	45509616	45509639	143	-12.87
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4432	45509437	45509444	8mer-1a	45509424	45509444	154	-14.4
CAediting_57497	chr1_45510418_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4435	45510412	45510417	6mer	45510397	45510418	149	-22.24
CAediting_57497	chr1_45510418_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4435	45510412	45510417	6mer	45510397	45510418	149	-22.24
CAediting_57455	chr1_45509891_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4435	45509884	45509891	8mer-1a	45509870	45509891	149	-18.63
CAediting_57455	chr1_45509891_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4435	45509884	45509891	8mer-1a	45509870	45509891	149	-18.63
CAediting_57414	chr1_45509530_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4478	45509527	45509533	7mer-m8	45509517	45509534	148	-19.55
CAediting_57401	chr1_45509437_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4522	45509435	45509441	7mer-m8	45509422	45509442	152	-14.23
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4522	45509435	45509441	7mer-m8	45509422	45509442	152	-14.23
CAediting_57486	chr1_45510027_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4638-5p	45510021	45510028	8mer-1a	45510009	45510028	146	-18.74
CAediting_57414	chr1_45509530_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4649-3p	45509524	45509530	7mer-m8	45509511	45509531	140	-12.17
CAediting_57502	chr1_45510446_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4654	45510440	45510446	7mer-m8	45510427	45510447	149	-17.82
CAediting_57505	chr1_45510489_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4680-3p	45510487	45510494	8mer-1a	45510474	45510494	140	-11.04
CAediting_57506	chr1_45510493_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4680-3p	45510487	45510494	8mer-1a	45510474	45510494	140	-11.04
CAediting_57456	chr1_45509894_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4742-3p	45509890	45509896	7mer-m8	45509877	45509897	145	-13.7
CAediting_57457	chr1_45509896_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4742-3p	45509890	45509896	7mer-m8	45509877	45509897	145	-13.7
CAediting_57502	chr1_45510446_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4769-5p	45510440	45510446	7mer-m8	45510420	45510447	141	-23.44
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4780	45510330	45510336	7mer-m8	45510316	45510337	154	-17.59
CAediting_57405	chr1_45509469_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4793-3p	45509463	45509469	7mer-m8	45509448	45509470	153	-20.11
CAediting_57414	chr1_45509530_+	ENSG00000132763.13	ENST00000401061	hsa-miR-485-5p	45509528	45509534	7mer-m8	45509514	45509535	153	-18.24
CAediting_57481	chr1_45510009_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5001-3p	45510004	45510010	7mer-m8	45509987	45510011	153	-20.4
CAediting_57482	chr1_45510011_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5001-3p	45510004	45510010	7mer-m8	45509987	45510011	153	-20.4
CAediting_57491	chr1_45510067_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5007-5p	45510064	45510070	7mer-m8	45510048	45510071	144	-16.06
CAediting_57404	chr1_45509464_+	ENSG00000132763.13	ENST00000401061	hsa-miR-508-5p	45509459	45509465	7mer-m8	45509444	45509466	146	-17.52
CAediting_57501	chr1_45510441_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5089-5p	45510439	45510445	7mer-m8	45510426	45510446	151	-20.46
CAediting_57502	chr1_45510446_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5089-5p	45510439	45510445	7mer-m8	45510426	45510446	151	-20.46
CAediting_57444	chr1_45509827_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5089-5p	45509825	45509831	7mer-m8	45509810	45509832	145	-13.34
CAediting_57445	chr1_45509832_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5089-5p	45509825	45509831	7mer-m8	45509810	45509832	145	-13.34
CAediting_57445	chr1_45509832_+	ENSG00000132763.13	ENST00000401061	hsa-miR-512-3p	45509830	45509836	7mer-m8	45509816	45509837	149	-15.5
CAediting_57446	chr1_45509835_+	ENSG00000132763.13	ENST00000401061	hsa-miR-512-3p	45509830	45509836	7mer-m8	45509816	45509837	149	-15.5
CAediting_57445	chr1_45509832_+	ENSG00000132763.13	ENST00000401061	hsa-miR-512-3p	45509830	45509836	7mer-m8	45509816	45509837	149	-15.5
CAediting_57446	chr1_45509835_+	ENSG00000132763.13	ENST00000401061	hsa-miR-512-3p	45509830	45509836	7mer-m8	45509816	45509837	149	-15.5
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-515-3p	45510417	45510423	7mer-m8	45510403	45510424	140	-17.47
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-515-3p	45510417	45510423	7mer-m8	45510403	45510424	140	-17.47
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-519e-3p	45510417	45510423	7mer-m8	45510403	45510424	140	-17.02
CAediting_57429	chr1_45509623_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548s	45509616	45509622	7mer-m8	45509602	45509623	143	-10.86
CAediting_57497	chr1_45510418_+	ENSG00000132763.13	ENST00000401061	hsa-miR-550a-3-5p	45510416	45510422	7mer-m8	45510404	45510423	140	-17.55
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-550a-3-5p	45510416	45510422	7mer-m8	45510404	45510423	140	-17.55
CAediting_57497	chr1_45510418_+	ENSG00000132763.13	ENST00000401061	hsa-miR-550a-5p	45510416	45510422	7mer-m8	45510401	45510423	140	-19.05
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-550a-5p	45510416	45510422	7mer-m8	45510401	45510423	140	-19.05
CAediting_57497	chr1_45510418_+	ENSG00000132763.13	ENST00000401061	hsa-miR-550a-5p	45510416	45510422	7mer-m8	45510401	45510423	140	-19.05
CAediting_57498	chr1_45510422_+	ENSG00000132763.13	ENST00000401061	hsa-miR-550a-5p	45510416	45510422	7mer-m8	45510401	45510423	140	-19.05
CAediting_57499	chr1_45510434_+	ENSG00000132763.13	ENST00000401061	hsa-miR-552-3p	45510432	45510439	8mer-1a	45510419	45510439	148	-17.31
CAediting_57416	chr1_45509542_+	ENSG00000132763.13	ENST00000401061	hsa-miR-5690	45509539	45509545	7mer-m8	45509526	45509546	145	-17.72
CAediting_57478	chr1_45509997_+	ENSG00000132763.13	ENST00000401061	hsa-miR-607	45509991	45509997	7mer-m8	45509980	45509998	145	-11.64
CAediting_57479	chr1_45509998_+	ENSG00000132763.13	ENST00000401061	hsa-miR-607	45509991	45509997	7mer-m8	45509980	45509998	145	-11.64
CAediting_57409	chr1_45509493_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6086	45509491	45509497	7mer-m8	45509479	45509498	150	-20.42
CAediting_57453	chr1_45509879_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6131	45509877	45509883	7mer-m8	45509864	45509884	143	-18.2
CAediting_57454	chr1_45509882_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6131	45509877	45509883	7mer-m8	45509864	45509884	143	-18.2
CAediting_57449	chr1_45509862_+	ENSG00000132763.13	ENST00000401061	hsa-miR-640	45509855	45509861	7mer-m8	45509846	45509862	154	-26.45
CAediting_57500	chr1_45510440_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6504-3p	45510435	45510441	7mer-m8	45510423	45510442	146	-12.87
CAediting_57501	chr1_45510441_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6504-3p	45510435	45510441	7mer-m8	45510423	45510442	146	-12.87
CAediting_57443	chr1_45509826_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6504-3p	45509821	45509827	7mer-m8	45509807	45509828	148	-14.48
CAediting_57444	chr1_45509827_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6504-3p	45509821	45509827	7mer-m8	45509807	45509828	148	-14.48
CAediting_57445	chr1_45509832_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6506-5p	45509826	45509832	7mer-m8	45509811	45509833	144	-14.98
CAediting_57404	chr1_45509464_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6512-3p	45509457	45509463	7mer-m8	45509443	45509464	142	-19.67
CAediting_57409	chr1_45509493_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6516-5p	45509487	45509493	7mer-m8	45509469	45509494	147	-13.95
CAediting_57404	chr1_45509464_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6720-5p	45509457	45509463	7mer-m8	45509443	45509464	152	-24.83
CAediting_57448	chr1_45509853_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6747-3p	45509848	45509854	7mer-m8	45509834	45509855	150	-25.36
CAediting_57434	chr1_45509655_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6756-5p	45509652	45509658	7mer-1a	45509636	45509658	153	-28.86
CAediting_57441	chr1_45509691_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6758-3p	45509689	45509695	7mer-m8	45509678	45509696	146	-14.95
CAediting_57442	chr1_45509692_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6758-3p	45509689	45509695	7mer-m8	45509678	45509696	146	-14.95
CAediting_57489	chr1_45510059_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6760-3p	45510055	45510061	7mer-m8	45510042	45510062	148	-19.47
CAediting_57489	chr1_45510059_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6773-3p	45510053	45510059	7mer-m8	45510039	45510060	142	-14.97
CAediting_57503	chr1_45510457_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6778-3p	45510453	45510459	7mer-m8	45510441	45510460	144	-14.16
CAediting_57447	chr1_45509843_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6778-3p	45509839	45509845	7mer-m8	45509826	45509846	147	-15.69
CAediting_57480	chr1_45510005_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6778-3p	45510001	45510008	8mer-1a	45509990	45510008	151	-21.71
CAediting_57435	chr1_45509672_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6779-5p	45509665	45509672	8mer-1a	45509649	45509672	151	-22.6
CAediting_57480	chr1_45510005_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6791-3p	45510002	45510008	7mer-1a	45509989	45510008	145	-23.91
CAediting_57480	chr1_45510005_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6836-3p	45510002	45510008	7mer-m8	45509989	45510009	145	-19.32
CAediting_57481	chr1_45510009_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6836-3p	45510002	45510008	7mer-m8	45509989	45510009	145	-19.32
CAediting_57452	chr1_45509877_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6843-3p	45509875	45509881	7mer-m8	45509862	45509882	146	-16.77
CAediting_57453	chr1_45509879_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6843-3p	45509875	45509881	7mer-m8	45509862	45509882	146	-16.77
CAediting_57454	chr1_45509882_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6843-3p	45509875	45509881	7mer-m8	45509862	45509882	146	-16.77
CAediting_57452	chr1_45509877_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6848-3p	45509875	45509881	7mer-m8	45509860	45509882	143	-18.78
CAediting_57453	chr1_45509879_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6848-3p	45509875	45509881	7mer-m8	45509860	45509882	143	-18.78
CAediting_57454	chr1_45509882_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6848-3p	45509875	45509881	7mer-m8	45509860	45509882	143	-18.78
CAediting_57496	chr1_45510334_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6851-3p	45510332	45510338	7mer-m8	45510319	45510339	142	-14.11
CAediting_57408	chr1_45509488_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6869-5p	45509481	45509487	7mer-m8	45509466	45509488	154	-23.16
CAediting_57472	chr1_45509966_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6869-5p	45509963	45509969	7mer-m8	45509947	45509970	152	-21.14
CAediting_57473	chr1_45509970_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6869-5p	45509963	45509969	7mer-m8	45509947	45509970	152	-21.14
CAediting_57401	chr1_45509437_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6888-3p	45509432	45509438	7mer-m8	45509419	45509439	143	-9.14
CAediting_57402	chr1_45509439_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6888-3p	45509432	45509438	7mer-m8	45509419	45509439	143	-9.14
CAediting_57480	chr1_45510005_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7113-3p	45509999	45510005	7mer-m8	45509984	45510006	140	-18.83
CAediting_57443	chr1_45509826_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7151-3p	45509819	45509826	8mer-1a	45509806	45509826	152	-18.13
CAediting_57470	chr1_45509956_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7151-3p	45509949	45509955	7mer-m8	45509936	45509956	143	-20.23
CAediting_57440	chr1_45509688_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7152-5p	45509685	45509691	7mer-m8	45509671	45509692	151	-16.69
CAediting_57441	chr1_45509691_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7152-5p	45509685	45509691	7mer-m8	45509671	45509692	151	-16.69
CAediting_57442	chr1_45509692_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7152-5p	45509685	45509691	7mer-m8	45509671	45509692	151	-16.69
CAediting_57488	chr1_45510042_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7156-3p	45510035	45510041	7mer-m8	45510014	45510042	148	-25.2
CAediting_57406	chr1_45509475_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7157-3p	45509472	45509477	6mer	45509457	45509478	147	-24.29
CAediting_57407	chr1_45509477_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7157-3p	45509472	45509477	6mer	45509457	45509478	147	-24.29
CAediting_57414	chr1_45509530_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7160-5p	45509525	45509531	7mer-m8	45509512	45509532	141	-18.59
CAediting_57446	chr1_45509835_+	ENSG00000132763.13	ENST00000401061	hsa-miR-759	45509833	45509839	7mer-m8	45509819	45509840	145	-14.48
CAediting_57404	chr1_45509464_+	ENSG00000132763.13	ENST00000401061	hsa-miR-766-3p	45509458	45509464	7mer-m8	45509444	45509465	145	-20.72
CAediting_57417	chr1_45509549_+	ENSG00000132763.13	ENST00000401061	hsa-miR-7977	45509542	45509548	7mer-m8	45509533	45509549	145	-13.47
CAediting_57437	chr1_45509674_+	ENSG00000132763.13	ENST00000401061	hsa-miR-8083	45509672	45509678	7mer-m8	45509659	45509679	143	-19.24
CAediting_57407	chr1_45509477_+	ENSG00000132763.13	ENST00000401061	hsa-miR-873-3p	45509475	45509481	7mer-m8	45509456	45509482	141	-22.88
CAediting_57435	chr1_45509672_+	ENSG00000132763.13	ENST00000401061	hsa-miR-887-5p	45509666	45509673	8mer-1a	45509653	45509673	147	-15.68
CAediting_57436	chr1_45509673_+	ENSG00000132763.13	ENST00000401061	hsa-miR-887-5p	45509666	45509673	8mer-1a	45509653	45509673	147	-15.68
CAediting_57490	chr1_45510065_+	ENSG00000132763.13	ENST00000401061	hsa-miR-924	45510064	45510069	6mer	45510051	45510070	144	-18.22
CAediting_57491	chr1_45510067_+	ENSG00000132763.13	ENST00000401061	hsa-miR-924	45510064	45510069	6mer	45510051	45510070	144	-18.22

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000132763.13	ENST00000401061	hsa-miR-200b-3p	45511821	45511827	7mer-m8	45511807	45511828	140	-13.18
CAediting_1229414	chr17_67471546_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548aa	45509626	45509632	7mer-m8	45509609	45509633	140	-12.31
CAediting_1229415	chr17_67471547_+	ENSG00000132763.13	ENST00000401061	hsa-miR-548aa	45509265	45509271	7mer-m8	45509248	45509272	155	-10.74
CAediting_1368054	chr19_46709310_-	ENSG00000132763.13	ENST00000401061	hsa-miR-320e	45510661	45510667	7mer-m8	45510649	45510668	142	-16.69
CAediting_86358	chr1_109598906_+	ENSG00000132763.13	ENST00000401061	hsa-miR-197-5p	45511178	45511184	7mer-m8	45511163	45511185	169	-29.93
CAediting_86358	chr1_109598906_+	ENSG00000132763.13	ENST00000401061	hsa-miR-197-5p	45509651	45509658	8mer-1a	45509632	45509658	154	-27.41
CAediting_1399425	chr20_1392958_-	ENSG00000132763.13	ENST00000401061	hsa-miR-6869-5p	45510598	45510605	8mer-1a	45510585	45510605	147	-23.33
CAediting_396018	chr5_1062918_-	ENSG00000132763.13	ENST00000401061	hsa-miR-4635	45510328	45510334	7mer-m8	45510315	45510335	152	-19.19
CAediting_580943	chr7_100356700_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6840-3p	45512174	45512180	7mer-m8	45512160	45512181	143	-25.48
CAediting_524911	chr7_5495852_-	ENSG00000132763.13	ENST00000401061	hsa-miR-589-3p	45510819	45510825	7mer-m8	45510802	45510826	147	-21.01
CAediting_1229415	chr17_67471547_+	ENSG00000132763.13	ENST00000616135	hsa-miR-548aa	45509265	45509271	7mer-m8	45509248	45509272	155	-10.74
CAediting_1368054	chr19_46709310_-	ENSG00000132763.13	ENST00000616135	hsa-miR-320e	45510661	45510667	7mer-m8	45510649	45510668	142	-16.69
CAediting_1399425	chr20_1392958_-	ENSG00000132763.13	ENST00000616135	hsa-miR-6869-5p	45510598	45510605	8mer-1a	45510585	45510605	147	-23.33
CAediting_524911	chr7_5495852_-	ENSG00000132763.13	ENST00000616135	hsa-miR-589-3p	45510819	45510825	7mer-m8	45510802	45510826	147	-21.01

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573000	chr7_92204081_-	ENSG00000132763.13	ENST00000401061	hsa-miR-1285-5p	45513271	45513277	7mer-m8	45513255	45513278	142	-17.87
CAediting_573001	chr7_92204086_-	ENSG00000132763.13	ENST00000401061	hsa-miR-1285-5p	45513271	45513277	7mer-m8	45513255	45513278	142	-17.87
CAediting_442554	chr5_154685830_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1303	45510532	45510538	7mer-m8	45510520	45510539	150	-14.42
CAediting_442554	chr5_154685830_+	ENSG00000132763.13	ENST00000401061	hsa-miR-1303	45511694	45511700	7mer-m8	45511683	45511701	142	-10.29
CAediting_86358	chr1_109598906_+	ENSG00000132763.13	ENST00000401061	hsa-miR-197-5p	45511918	45511924	7mer-m8	45511905	45511925	154	-23.19
CAediting_604450	chr7_133034877_-	ENSG00000132763.13	ENST00000401061	hsa-miR-3654	45512706	45512712	7mer-m8	45512695	45512713	149	-19.44
CAediting_688080	chr9_63819626_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4477b	45511701	45511707	7mer-m8	45511689	45511708	153	-9.74
CAediting_688081	chr9_63819627_+	ENSG00000132763.13	ENST00000401061	hsa-miR-4477b	45511701	45511707	7mer-m8	45511689	45511708	153	-9.74
CAediting_1524209	chrX_134546392_-	ENSG00000132763.13	ENST00000401061	hsa-miR-503-5p	45510207	45510212	6mer	45510190	45510213	146	-22.8
CAediting_580943	chr7_100356700_+	ENSG00000132763.13	ENST00000401061	hsa-miR-6840-3p	45509502	45509508	7mer-m8	45509488	45509509	140	-22.98
CAediting_1399425	chr20_1392958_-	ENSG00000132763.13	ENST00000401061	hsa-miR-6869-5p	45509481	45509487	7mer-m8	45509466	45509488	154	-23.16
CAediting_1399425	chr20_1392958_-	ENSG00000132763.13	ENST00000401061	hsa-miR-6869-5p	45512420	45512426	7mer-m8	45512404	45512427	150	-20.35
CAediting_1399425	chr20_1392958_-	ENSG00000132763.13	ENST00000401061	hsa-miR-6869-5p	45509963	45509969	7mer-m8	45509947	45509970	152	-21.14
CAediting_468389	chr6_31355314_-	ENSG00000132763.13	ENST00000401061	hsa-miR-6891-5p	45512738	45512744	7mer-m8	45512727	45512745	149	-18.36

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for MMACHC

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000401061.7	protein_coding
ENST00000616135.1	protein_coding
ENST00000477188.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_57399	ENST00000401061.7	chr1_45508804_+	-2077.11	-2074.60	-2107.40
CAediting_57400	ENST00000401061.7	chr1_45509433_+	-2076.60	-2074.60	-2107.40
CAediting_57401	ENST00000401061.7	chr1_45509437_+	-2073.90	-2074.60	-2107.40
CAediting_57402	ENST00000401061.7	chr1_45509439_+	-2073.70	-2074.60	-2107.40
CAediting_57403	ENST00000401061.7	chr1_45509453_+	-2074.20	-2074.60	-2107.40
CAediting_57404	ENST00000401061.7	chr1_45509464_+	-2073.70	-2074.60	-2107.40
CAediting_57405	ENST00000401061.7	chr1_45509469_+	-2073.90	-2074.60	-2107.40
CAediting_57406	ENST00000401061.7	chr1_45509475_+	-2079.70	-2074.60	-2107.40
CAediting_57407	ENST00000401061.7	chr1_45509477_+	-2073.80	-2074.60	-2107.40
CAediting_57408	ENST00000401061.7	chr1_45509488_+	-2074.20	-2074.60	-2107.40
CAediting_57409	ENST00000401061.7	chr1_45509493_+	-2074.30	-2074.60	-2107.40
CAediting_57410	ENST00000401061.7	chr1_45509513_+	-2074.30	-2074.60	-2107.40
CAediting_57411	ENST00000401061.7	chr1_45509517_+	-2079.10	-2074.60	-2107.40
CAediting_57412	ENST00000401061.7	chr1_45509518_+	-2074.40	-2074.60	-2107.40
CAediting_57413	ENST00000401061.7	chr1_45509521_+	-2076.40	-2074.60	-2107.40
CAediting_57414	ENST00000401061.7	chr1_45509530_+	-2073.90	-2074.60	-2107.40
CAediting_57415	ENST00000401061.7	chr1_45509539_+	-2073.70	-2074.60	-2107.40
CAediting_57416	ENST00000401061.7	chr1_45509542_+	-2074.30	-2074.60	-2107.40
CAediting_57417	ENST00000401061.7	chr1_45509549_+	-2072.10	-2074.60	-2107.40
CAediting_57418	ENST00000401061.7	chr1_45509552_+	-2074.90	-2074.60	-2107.40
CAediting_57419	ENST00000401061.7	chr1_45509554_+	-2073.90	-2074.60	-2107.40
CAediting_57420	ENST00000401061.7	chr1_45509568_+	-2075.40	-2074.60	-2107.40
CAediting_57421	ENST00000401061.7	chr1_45509570_+	-2078.40	-2074.60	-2107.40
CAediting_57422	ENST00000401061.7	chr1_45509578_+	-2074.70	-2074.60	-2107.40
CAediting_57423	ENST00000401061.7	chr1_45509579_+	-2073.50	-2074.60	-2107.40
CAediting_57424	ENST00000401061.7	chr1_45509594_+	-2074.30	-2074.60	-2107.40
CAediting_57425	ENST00000401061.7	chr1_45509599_+	-2073.70	-2074.60	-2107.40
CAediting_57426	ENST00000401061.7	chr1_45509611_+	-2071.60	-2074.60	-2107.40
CAediting_57427	ENST00000401061.7	chr1_45509614_+	-2078.00	-2074.60	-2107.40
CAediting_57428	ENST00000401061.7	chr1_45509616_+	-2074.60	-2074.60	-2107.40
CAediting_57429	ENST00000401061.7	chr1_45509623_+	-2073.90	-2074.60	-2107.40
CAediting_57430	ENST00000401061.7	chr1_45509635_+	-2075.00	-2074.60	-2107.40
CAediting_57431	ENST00000401061.7	chr1_45509636_+	-2074.60	-2074.60	-2107.40
CAediting_57432	ENST00000401061.7	chr1_45509643_+	-2074.00	-2074.60	-2107.40
CAediting_57433	ENST00000401061.7	chr1_45509651_+	-2074.00	-2074.60	-2107.40
CAediting_57434	ENST00000401061.7	chr1_45509655_+	-2074.20	-2074.60	-2107.40
CAediting_57435	ENST00000401061.7	chr1_45509672_+	-2073.90	-2074.60	-2107.40
CAediting_57436	ENST00000401061.7	chr1_45509673_+	-2081.00	-2074.60	-2107.40
CAediting_57437	ENST00000401061.7	chr1_45509674_+	-2074.60	-2074.60	-2107.40
CAediting_57438	ENST00000401061.7	chr1_45509683_+	-2074.00	-2074.60	-2107.40
CAediting_57439	ENST00000401061.7	chr1_45509686_+	-2074.60	-2074.60	-2107.40
CAediting_57440	ENST00000401061.7	chr1_45509688_+	-2073.90	-2074.60	-2107.40
CAediting_57441	ENST00000401061.7	chr1_45509691_+	-2074.80	-2074.60	-2107.40
CAediting_57442	ENST00000401061.7	chr1_45509692_+	-2075.30	-2074.60	-2107.40
CAediting_57443	ENST00000401061.7	chr1_45509826_+	-2074.70	-2074.60	-2107.40
CAediting_57444	ENST00000401061.7	chr1_45509827_+	-2074.60	-2074.60	-2107.40
CAediting_57445	ENST00000401061.7	chr1_45509832_+	-2073.90	-2074.60	-2107.40
CAediting_57446	ENST00000401061.7	chr1_45509835_+	-2074.90	-2074.60	-2107.40
CAediting_57447	ENST00000401061.7	chr1_45509843_+	-2073.70	-2074.60	-2107.40
CAediting_57448	ENST00000401061.7	chr1_45509853_+	-2079.60	-2074.60	-2107.40
CAediting_57449	ENST00000401061.7	chr1_45509862_+	-2071.20	-2074.60	-2107.40
CAediting_57450	ENST00000401061.7	chr1_45509865_+	-2073.70	-2074.60	-2107.40
CAediting_57451	ENST00000401061.7	chr1_45509871_+	-2075.50	-2074.60	-2107.40
CAediting_57452	ENST00000401061.7	chr1_45509877_+	-2073.80	-2074.60	-2107.40
CAediting_57453	ENST00000401061.7	chr1_45509879_+	-2074.00	-2074.60	-2107.40
CAediting_57454	ENST00000401061.7	chr1_45509882_+	-2073.90	-2074.60	-2107.40
CAediting_57455	ENST00000401061.7	chr1_45509891_+	-2074.30	-2074.60	-2107.40
CAediting_57456	ENST00000401061.7	chr1_45509894_+	-2073.70	-2074.60	-2107.40
CAediting_57457	ENST00000401061.7	chr1_45509896_+	-2077.40	-2074.60	-2107.40
CAediting_57458	ENST00000401061.7	chr1_45509900_+	-2074.10	-2074.60	-2107.40
CAediting_57459	ENST00000401061.7	chr1_45509901_+	-2074.70	-2074.60	-2107.40
CAediting_57460	ENST00000401061.7	chr1_45509902_+	-2074.60	-2074.60	-2107.40
CAediting_57461	ENST00000401061.7	chr1_45509916_+	-2074.70	-2074.60	-2107.40
CAediting_57462	ENST00000401061.7	chr1_45509918_+	-2074.70	-2074.60	-2107.40
CAediting_57463	ENST00000401061.7	chr1_45509919_+	-2074.70	-2074.60	-2107.40
CAediting_57464	ENST00000401061.7	chr1_45509920_+	-2074.60	-2074.60	-2107.40
CAediting_57465	ENST00000401061.7	chr1_45509925_+	-2074.70	-2074.60	-2107.40
CAediting_57466	ENST00000401061.7	chr1_45509926_+	-2074.30	-2074.60	-2107.40
CAediting_57467	ENST00000401061.7	chr1_45509930_+	-2074.30	-2074.60	-2107.40
CAediting_57468	ENST00000401061.7	chr1_45509943_+	-2078.90	-2074.60	-2107.40
CAediting_57469	ENST00000401061.7	chr1_45509948_+	-2074.90	-2074.60	-2107.40
CAediting_57470	ENST00000401061.7	chr1_45509956_+	-2077.20	-2074.60	-2107.40
CAediting_57471	ENST00000401061.7	chr1_45509962_+	-2073.90	-2074.60	-2107.40
CAediting_57472	ENST00000401061.7	chr1_45509966_+	-2074.60	-2074.60	-2107.40
CAediting_57473	ENST00000401061.7	chr1_45509970_+	-2073.90	-2074.60	-2107.40
CAediting_57474	ENST00000401061.7	chr1_45509983_+	-2073.90	-2074.60	-2107.40
CAediting_57475	ENST00000401061.7	chr1_45509986_+	-2074.60	-2074.60	-2107.40
CAediting_57476	ENST00000401061.7	chr1_45509989_+	-2074.60	-2074.60	-2107.40
CAediting_57477	ENST00000401061.7	chr1_45509992_+	-2078.50	-2074.60	-2107.40
CAediting_57478	ENST00000401061.7	chr1_45509997_+	-2074.10	-2074.60	-2107.40
CAediting_57479	ENST00000401061.7	chr1_45509998_+	-2074.60	-2074.60	-2107.40
CAediting_57480	ENST00000401061.7	chr1_45510005_+	-2073.70	-2074.60	-2107.40
CAediting_57481	ENST00000401061.7	chr1_45510009_+	-2073.90	-2074.60	-2107.40
CAediting_57482	ENST00000401061.7	chr1_45510011_+	-2073.70	-2074.60	-2107.40
CAediting_57483	ENST00000401061.7	chr1_45510013_+	-2081.30	-2074.60	-2107.40
CAediting_57484	ENST00000401061.7	chr1_45510018_+	-2073.90	-2074.60	-2107.40
CAediting_57485	ENST00000401061.7	chr1_45510022_+	-2073.70	-2074.60	-2107.40
CAediting_57486	ENST00000401061.7	chr1_45510027_+	-2073.70	-2074.60	-2107.40
CAediting_57487	ENST00000401061.7	chr1_45510034_+	-2079.70	-2074.60	-2107.40
CAediting_57488	ENST00000401061.7	chr1_45510042_+	-2074.20	-2074.60	-2107.40
CAediting_57489	ENST00000401061.7	chr1_45510059_+	-2073.90	-2074.60	-2107.40
CAediting_57490	ENST00000401061.7	chr1_45510065_+	-2073.80	-2074.60	-2107.40
CAediting_57491	ENST00000401061.7	chr1_45510067_+	-2074.00	-2074.60	-2107.40
CAediting_57492	ENST00000401061.7	chr1_45510082_+	-2074.70	-2074.60	-2107.40
CAediting_57493	ENST00000401061.7	chr1_45510083_+	-2074.70	-2074.60	-2107.40
CAediting_57494	ENST00000401061.7	chr1_45510085_+	-2074.70	-2074.60	-2107.40
CAediting_57495	ENST00000401061.7	chr1_45510086_+	-2074.70	-2074.60	-2107.40
CAediting_57496	ENST00000401061.7	chr1_45510334_+	-2077.81	-2074.60	-2107.40
CAediting_57497	ENST00000401061.7	chr1_45510418_+	-2073.80	-2074.60	-2107.40
CAediting_57498	ENST00000401061.7	chr1_45510422_+	-2074.31	-2074.60	-2107.40
CAediting_57499	ENST00000401061.7	chr1_45510434_+	-2077.70	-2074.60	-2107.40
CAediting_57500	ENST00000401061.7	chr1_45510440_+	-2079.61	-2074.60	-2107.40
CAediting_57501	ENST00000401061.7	chr1_45510441_+	-2074.91	-2074.60	-2107.40
CAediting_57502	ENST00000401061.7	chr1_45510446_+	-2074.40	-2074.60	-2107.40
CAediting_57503	ENST00000401061.7	chr1_45510457_+	-2073.40	-2074.60	-2107.40
CAediting_57504	ENST00000401061.7	chr1_45510472_+	-2078.41	-2074.60	-2107.40
CAediting_57505	ENST00000401061.7	chr1_45510489_+	-2078.00	-2074.60	-2107.40
CAediting_57506	ENST00000401061.7	chr1_45510493_+	-2073.80	-2074.60	-2107.40
CAediting_57507	ENST00000401061.7	chr1_45510513_+	-2075.50	-2074.60	-2107.40
CAediting_57399	ENST00000616135.1	chr1_45508804_+	-465.10	-460.40	-465.10
CAediting_57400	ENST00000477188.1	chr1_45509433_+	-274.00	-274.00	-303.60
CAediting_57401	ENST00000477188.1	chr1_45509437_+	-273.30	-274.00	-303.60
CAediting_57402	ENST00000477188.1	chr1_45509439_+	-273.10	-274.00	-303.60
CAediting_57403	ENST00000477188.1	chr1_45509453_+	-273.60	-274.00	-303.60
CAediting_57404	ENST00000477188.1	chr1_45509464_+	-273.10	-274.00	-303.60
CAediting_57405	ENST00000477188.1	chr1_45509469_+	-273.30	-274.00	-303.60
CAediting_57406	ENST00000477188.1	chr1_45509475_+	-279.10	-274.00	-303.60
CAediting_57407	ENST00000477188.1	chr1_45509477_+	-273.20	-274.00	-303.60
CAediting_57408	ENST00000477188.1	chr1_45509488_+	-273.60	-274.00	-303.60
CAediting_57409	ENST00000477188.1	chr1_45509493_+	-273.70	-274.00	-303.60
CAediting_57474	ENST00000477188.1	chr1_45509983_+	-275.10	-274.00	-303.60
CAediting_57475	ENST00000477188.1	chr1_45509986_+	-273.90	-274.00	-303.60
CAediting_57476	ENST00000477188.1	chr1_45509989_+	-275.40	-274.00	-303.60
CAediting_57477	ENST00000477188.1	chr1_45509992_+	-276.20	-274.00	-303.60
CAediting_57478	ENST00000477188.1	chr1_45509997_+	-275.60	-274.00	-303.60
CAediting_57479	ENST00000477188.1	chr1_45509998_+	-278.80	-274.00	-303.60
CAediting_57480	ENST00000477188.1	chr1_45510005_+	-273.10	-274.00	-303.60
CAediting_57481	ENST00000477188.1	chr1_45510009_+	-273.30	-274.00	-303.60
CAediting_57482	ENST00000477188.1	chr1_45510011_+	-273.10	-274.00	-303.60
CAediting_57483	ENST00000477188.1	chr1_45510013_+	-280.70	-274.00	-303.60
CAediting_57484	ENST00000477188.1	chr1_45510018_+	-273.30	-274.00	-303.60
CAediting_57485	ENST00000477188.1	chr1_45510022_+	-273.10	-274.00	-303.60
CAediting_57486	ENST00000477188.1	chr1_45510027_+	-273.10	-274.00	-303.60
CAediting_57487	ENST00000477188.1	chr1_45510034_+	-279.10	-274.00	-303.60
CAediting_57488	ENST00000477188.1	chr1_45510042_+	-273.60	-274.00	-303.60
CAediting_57489	ENST00000477188.1	chr1_45510059_+	-273.30	-274.00	-303.60
CAediting_57490	ENST00000477188.1	chr1_45510065_+	-273.20	-274.00	-303.60
CAediting_57491	ENST00000477188.1	chr1_45510067_+	-273.40	-274.00	-303.60
CAediting_57492	ENST00000477188.1	chr1_45510082_+	-274.00	-274.00	-303.60
CAediting_57493	ENST00000477188.1	chr1_45510083_+	-274.00	-274.00	-303.60
CAediting_57494	ENST00000477188.1	chr1_45510085_+	-274.00	-274.00	-303.60
CAediting_57495	ENST00000477188.1	chr1_45510086_+	-274.00	-274.00	-303.60
CAediting_57496	ENST00000477188.1	chr1_45510334_+	-274.00	-274.00	-303.60
CAediting_57497	ENST00000477188.1	chr1_45510418_+	-273.30	-274.00	-303.60
CAediting_57498	ENST00000477188.1	chr1_45510422_+	-274.80	-274.00	-303.60
CAediting_57499	ENST00000477188.1	chr1_45510434_+	-276.00	-274.00	-303.60
CAediting_57500	ENST00000477188.1	chr1_45510440_+	-274.00	-274.00	-303.60
CAediting_57501	ENST00000477188.1	chr1_45510441_+	-274.00	-274.00	-303.60
CAediting_57502	ENST00000477188.1	chr1_45510446_+	-273.30	-274.00	-303.60
CAediting_57503	ENST00000477188.1	chr1_45510457_+	-273.20	-274.00	-303.60
CAediting_57504	ENST00000477188.1	chr1_45510472_+	-274.70	-274.00	-303.60
CAediting_57505	ENST00000477188.1	chr1_45510489_+	-276.80	-274.00	-303.60
CAediting_57506	ENST00000477188.1	chr1_45510493_+	-274.00	-274.00	-303.60

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Relation with ADAR for MMACHC

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
COAD	CAediting_57400	chr1_45509433_+	0.0232713730116326	0.265360273835795	.	.	.	.
BRCA	CAediting_57409	chr1_45509493_+	0.000761513647278906	0.358244485633685	.	.	.	.
BRCA	CAediting_57422	chr1_45509578_+	3.6136858585216e-09	0.370737212092389	.	.	.	.
LIHC	CAediting_57422	chr1_45509578_+	3.26414884909163e-05	0.329140661837814	.	.	.	.
LUAD	CAediting_57422	chr1_45509578_+	8.48569217587572e-06	0.498131482432651	.	.	.	.
COAD	CAediting_57422	chr1_45509578_+	0.0217744429329456	0.266400629759725	.	.	.	.
LUSC	CAediting_57422	chr1_45509578_+	0.000653345454896782	0.400337537326327	.	.	.	.
STAD	CAediting_57422	chr1_45509578_+	0.0105800728362107	0.275946418377108	.	.	.	.
UCEC	CAediting_57422	chr1_45509578_+	5.30609184859398e-05	0.446384983664524	.	.	.	.
OV	CAediting_57422	chr1_45509578_+	4.16038656477073e-05	0.297302881464037	.	.	.	.
SKCM	CAediting_57422	chr1_45509578_+	3.35564488612115e-09	0.389506206231267	.	.	.	.
TGCT	CAediting_57422	chr1_45509578_+	0.00398884427049931	0.378820780321142	.	.	.	.
BRCA	CAediting_57424	chr1_45509594_+	0.00114942130965744	0.273933741076866	.	.	.	.
LIHC	CAediting_57424	chr1_45509594_+	0.0068700477356037	0.24255416523169	.	.	.	.
STAD	CAediting_57424	chr1_45509594_+	0.0418118159381512	0.216247727908596	.	.	.	.
OV	CAediting_57424	chr1_45509594_+	3.73427113693217e-05	0.301414825833535	0.0197611702640976	0.173139842913975	.	.
SKCM	CAediting_57424	chr1_45509594_+	0.000845689340868192	0.289220245028924	.	.	.	.
LIHC	CAediting_57427	chr1_45509614_+	0.000127880645929712	0.502080770205072	.	.	.	.
BLCA	CAediting_57436	chr1_45509673_+	7.19025946842525e-15	0.505148604127914	0.00344932257052658	0.201906568628894	.	.
LGG	CAediting_57436	chr1_45509673_+	2.96870469786124e-09	0.369722189893016	.	.	.	.
BRCA	CAediting_57436	chr1_45509673_+	1.52186549453256e-54	0.508502012319943	.	.	.	.
LIHC	CAediting_57436	chr1_45509673_+	1.77490125296526e-15	0.423342775733392	.	.	.	.
CESC	CAediting_57436	chr1_45509673_+	0.000262665905524855	0.271085495740239	.	.	.	.
LUAD	CAediting_57436	chr1_45509673_+	4.14004162066493e-10	0.365990155961732	.	.	.	.
COAD	CAediting_57436	chr1_45509673_+	1.21515332502753e-09	0.385598916334173	0.0149742783577748	0.159571353768934	.	.
LUSC	CAediting_57436	chr1_45509673_+	3.36973776024722e-18	0.470406439280965	0.0372045368132194	0.119364853926127	0.0011052092222747	0.185929488615825
GBM	CAediting_57436	chr1_45509673_+	7.06262909519804e-07	0.448528956459074	.	.	.	.
PRAD	CAediting_57436	chr1_45509673_+	1.34672627992139e-06	0.297230332839337	.	.	.	.
HNSC	CAediting_57436	chr1_45509673_+	1.23194238173544e-07	0.331997185735933	0.000796338477691522	0.214208399672112	.	.
STAD	CAediting_57436	chr1_45509673_+	4.64448312070616e-10	0.374091280005064	.	.	.	.
THCA	CAediting_57436	chr1_45509673_+	4.08013952958791e-05	0.240928708053914	.	.	.	.
KIRC	CAediting_57436	chr1_45509673_+	7.33678927536264e-07	0.308329639450776	.	.	.	.
UCEC	CAediting_57436	chr1_45509673_+	9.23295505613887e-15	0.453740676067961	0.000205401648389575	0.226994884578022	0.0247833325757651	0.138410432564191
ESCA	CAediting_57436	chr1_45509673_+	5.3417264088264e-05	0.378594953907009	.	.	.	.
OV	CAediting_57436	chr1_45509673_+	9.70364838609344e-21	0.468181654354577	.	.	.	.
SKCM	CAediting_57436	chr1_45509673_+	1.01183037654875e-21	0.494159992705282	.	.	.	.
UVM	CAediting_57436	chr1_45509673_+	0.000160107107470998	0.509021230340302	.	.	.	.
READ	CAediting_57436	chr1_45509673_+	0.00727877318886724	0.309553928594515	.	.	.	.
SARC	CAediting_57436	chr1_45509673_+	1.13669005906689e-07	0.487779890213892	.	.	.	.
TGCT	CAediting_57436	chr1_45509673_+	5.56275465779489e-11	0.553395668246707	.	.	.	.
BRCA	CAediting_57437	chr1_45509674_+	1.82823000434109e-06	0.323839222990803	.	.	.	.
LIHC	CAediting_57437	chr1_45509674_+	7.13927442959086e-06	0.346579558770672	.	.	.	.
UCEC	CAediting_57437	chr1_45509674_+	.	.	.	.	0.0049079848857591	0.364501253529058
OV	CAediting_57437	chr1_45509674_+	0.000149768364956293	0.277416175371455	.	.	.	.
BLCA	CAediting_57439	chr1_45509686_+	0.00302791563080426	0.392615503776616	.	.	.	.
LGG	CAediting_57439	chr1_45509686_+	2.42502324434784e-05	0.453226322921273	.	.	.	.
BRCA	CAediting_57439	chr1_45509686_+	3.46413939941104e-23	0.474574734045671	.	.	.	.
LIHC	CAediting_57439	chr1_45509686_+	7.58908970379975e-11	0.404951877017537	.	.	.	.
LUAD	CAediting_57439	chr1_45509686_+	1.93462409270608e-07	0.488236465837137	.	.	0.0443425348754301	0.199554740261071
LUSC	CAediting_57439	chr1_45509686_+	1.83215900326779e-08	0.515492686028033	.	.	0.0476193450260032	0.193784588718124
GBM	CAediting_57439	chr1_45509686_+	0.000234464264106822	0.429070163649079	.	.	.	.
HNSC	CAediting_57439	chr1_45509686_+	0.000512093670388044	0.342891144302904	.	.	.	.
STAD	CAediting_57439	chr1_45509686_+	1.32294077275191e-09	0.432596330816473	.	.	.	.
THCA	CAediting_57439	chr1_45509686_+	0.0191446646734989	0.273659344841447	.	.	.	.
UCEC	CAediting_57439	chr1_45509686_+	6.15947126292344e-05	0.328582397414975	0.00775641592764397	0.22181495124867	.	.
ESCA	CAediting_57439	chr1_45509686_+	0.000282133333366825	0.410349116897569	.	.	.	.
OV	CAediting_57439	chr1_45509686_+	3.2882670259737e-11	0.370771230682785	.	.	.	.
SKCM	CAediting_57439	chr1_45509686_+	2.69946037968118e-08	0.438839976048013	.	.	.	.
TGCT	CAediting_57439	chr1_45509686_+	8.00570164760554e-09	0.642396657050044	.	.	.	.
BLCA	CAediting_57443	chr1_45509826_+	0.0205635637038318	0.205338509148216	0.029484756475735	0.193258401669618	.	.
LGG	CAediting_57443	chr1_45509826_+	4.25075606077226e-05	0.386597795900592	.	.	.	.
BRCA	CAediting_57443	chr1_45509826_+	4.72863637458318e-38	0.56446411634232	.	.	.	.
LIHC	CAediting_57443	chr1_45509826_+	3.98403989931499e-13	0.40335836546187	.	.	.	.
CESC	CAediting_57443	chr1_45509826_+	0.00653093673081539	0.244014442722134	.	.	.	.
LUAD	CAediting_57443	chr1_45509826_+	0.000144544614242635	0.296898294038679	.	.	.	.
COAD	CAediting_57443	chr1_45509826_+	0.00715623206326522	0.293139758346072	.	.	.	.
LUSC	CAediting_57443	chr1_45509826_+	0.00169057843202389	0.30422815563559	.	.	.	.
GBM	CAediting_57443	chr1_45509826_+	6.94808823987259e-08	0.602341138698642	.	.	.	.
HNSC	CAediting_57443	chr1_45509826_+	4.73518939566006e-05	0.334476482902428	.	.	.	.
STAD	CAediting_57443	chr1_45509826_+	9.3161920807452e-05	0.382552956637029	.	.	.	.
THCA	CAediting_57443	chr1_45509826_+	0.000249484741158242	0.339567720991748	.	.	.	.
UCEC	CAediting_57443	chr1_45509826_+	4.38764759597721e-09	0.476855615493751	.	.	0.0300871985441686	0.186075186851694
OV	CAediting_57443	chr1_45509826_+	5.79521875302554e-10	0.394840397691715	.	.	.	.
SKCM	CAediting_57443	chr1_45509826_+	1.99264916441817e-11	0.485261953578448	.	.	.	.
SARC	CAediting_57443	chr1_45509826_+	0.0423717623032094	0.279895418158185	.	.	.	.
TGCT	CAediting_57443	chr1_45509826_+	1.87834290297074e-05	0.434491526379089	.	.	.	.
BLCA	CAediting_57444	chr1_45509827_+	.	.	0.0154896395818254	0.232439162538074	.	.
LGG	CAediting_57444	chr1_45509827_+	0.000654461506513326	0.340063191656109	.	.	.	.
BRCA	CAediting_57444	chr1_45509827_+	3.62174478476565e-23	0.472775852980049	.	.	.	.
LIHC	CAediting_57444	chr1_45509827_+	1.85203107320913e-09	0.351746020040172	.	.	.	.
CESC	CAediting_57444	chr1_45509827_+	0.0024277114363678	0.306021708400522	.	.	.	.
LUAD	CAediting_57444	chr1_45509827_+	0.00361204641578173	0.252550170088483	.	.	.	.
COAD	CAediting_57444	chr1_45509827_+	.	.	0.0371689636692915	0.274328092739593	.	.
LUSC	CAediting_57444	chr1_45509827_+	0.0254567113493623	0.22802139623259	.	.	.	.
GBM	CAediting_57444	chr1_45509827_+	0.00293242722076983	0.383873652694614	.	.	.	.
PRAD	CAediting_57444	chr1_45509827_+	.	.	0.0411237569854907	0.243040804511429	.	.
HNSC	CAediting_57444	chr1_45509827_+	0.0207914481457893	0.213542676832808	.	.	.	.
STAD	CAediting_57444	chr1_45509827_+	0.000489703392447365	0.392850376850769	0.0193072443235391	0.269651624996498	.	.
THCA	CAediting_57444	chr1_45509827_+	0.00821581483928015	0.295409101519768	.	.	.	.
UCEC	CAediting_57444	chr1_45509827_+	3.623002124246e-09	0.534435026079286	0.00602086697605888	0.265129243036756	0.00196522457749541	0.29734996706944
OV	CAediting_57444	chr1_45509827_+	3.18945377167584e-07	0.348746630298668	0.0497067671323655	0.137592272638941	.	.
SKCM	CAediting_57444	chr1_45509827_+	6.39672631410552e-05	0.339494193972719	.	.	.	.
TGCT	CAediting_57444	chr1_45509827_+	0.000108637480898326	0.449074001455745	.	.	.	.
LIHC	CAediting_57446	chr1_45509835_+	.	.	.	.	0.0377156565786937	0.186098633479637
LIHC	CAediting_57456	chr1_45509894_+	0.000704412376802501	0.387587568903429	.	.	.	.
BLCA	CAediting_57457	chr1_45509896_+	.	.	0.00438459930594233	0.297641556886	.	.
BRCA	CAediting_57457	chr1_45509896_+	0.00152307949232658	0.193092970975017	.	.	.	.
LIHC	CAediting_57457	chr1_45509896_+	3.13701193627599e-10	0.391826903585139	.	.	.	.
LUSC	CAediting_57457	chr1_45509896_+	0.000354749901424936	0.39426202269374	.	.	0.0418078629659616	0.231068406127346
UCEC	CAediting_57457	chr1_45509896_+	0.000599775091134399	0.345739803077216	.	.	.	.
OV	CAediting_57457	chr1_45509896_+	0.000130861629743741	0.295153339582523	.	.	.	.
SKCM	CAediting_57457	chr1_45509896_+	0.00490117395478288	0.254192301373297	.	.	.	.
TGCT	CAediting_57457	chr1_45509896_+	0.00293679567802736	0.35797822802917	.	.	.	.
BRCA	CAediting_57458	chr1_45509900_+	0.0142513380344447	0.243223610555324	.	.	.	.
BRCA	CAediting_57459	chr1_45509901_+	0.0172933433803501	0.201646175163557	.	.	.	.
LIHC	CAediting_57459	chr1_45509901_+	0.000244042730221523	0.303246847865887	.	.	.	.
OV	CAediting_57459	chr1_45509901_+	0.0126549504070614	0.238117711829277	.	.	.	.
BLCA	CAediting_57460	chr1_45509902_+	4.46580455019466e-06	0.355841551490029	0.0448050072577931	0.159868241267218	.	.
LGG	CAediting_57460	chr1_45509902_+	0.0184259609736129	0.21312409424162	.	.	.	.
BRCA	CAediting_57460	chr1_45509902_+	3.90669899784749e-29	0.440966934557229	.	.	.	.
LIHC	CAediting_57460	chr1_45509902_+	1.00968124391185e-11	0.381451019639925	.	.	.	.
LUAD	CAediting_57460	chr1_45509902_+	1.20728937581368e-05	0.328695539968791	.	.	.	.
COAD	CAediting_57460	chr1_45509902_+	4.47705607187569e-06	0.350579141773391	.	.	.	.
LUSC	CAediting_57460	chr1_45509902_+	5.51988501524623e-05	0.302444443900827	.	.	.	.
GBM	CAediting_57460	chr1_45509902_+	0.00213623327009595	0.326754355371785	.	.	.	.
PRAD	CAediting_57460	chr1_45509902_+	0.0174438289696038	0.197863196461087	.	.	.	.
HNSC	CAediting_57460	chr1_45509902_+	0.00129406324274344	0.273136392535618	.	.	.	.
STAD	CAediting_57460	chr1_45509902_+	3.16055620513309e-05	0.401524767509058	0.00434633709022585	0.281512613073669	.	.
KIRC	CAediting_57460	chr1_45509902_+	0.00550194329357694	0.248899745576813	.	.	.	.
UCEC	CAediting_57460	chr1_45509902_+	8.95879602607761e-05	0.279599264416988	0.0149677242882655	0.175837505661404	.	.
KIRP	CAediting_57460	chr1_45509902_+	.	.	0.0186916654242511	0.267464878262756	.	.
OV	CAediting_57460	chr1_45509902_+	2.81449237389726e-11	0.403344356660245	0.0466779364099971	0.12543677630418	.	.
SKCM	CAediting_57460	chr1_45509902_+	1.27716081370941e-11	0.379100284046366	.	.	.	.
UVM	CAediting_57460	chr1_45509902_+	0.0288436288334747	0.306244826855316	.	.	.	.
SARC	CAediting_57460	chr1_45509902_+	0.0383109073088373	0.270426680543388	.	.	.	.
TGCT	CAediting_57460	chr1_45509902_+	3.42440227724925e-07	0.477370040996471	.	.	.	.
OV	CAediting_57461	chr1_45509916_+	.	.	.	.	0.0399550802201571	0.26599488083823
BLCA	CAediting_57470	chr1_45509956_+	0.0151444756610717	0.175534910705372	.	.	.	.
LGG	CAediting_57470	chr1_45509956_+	0.000143390908806356	0.305550035844223	.	.	.	.
BRCA	CAediting_57470	chr1_45509956_+	0.00126215274182874	0.127585828065279	.	.	.	.
COAD	CAediting_57470	chr1_45509956_+	0.000852688794463324	0.217046496675259	0.0478121458937668	0.129799928341888	.	.
LUSC	CAediting_57470	chr1_45509956_+	0.0223018009678718	0.148400666192127	.	.	.	.
GBM	CAediting_57470	chr1_45509956_+	0.0365894881020502	0.211472708545716	.	.	.	.
HNSC	CAediting_57470	chr1_45509956_+	0.0140743212996382	0.180749925329286	.	.	.	.
OV	CAediting_57470	chr1_45509956_+	0.00718948343902167	0.18454938193387	.	.	.	.
SKCM	CAediting_57470	chr1_45509956_+	2.24770053534106e-07	0.269872639651393	.	.	.	.
UVM	CAediting_57470	chr1_45509956_+	0.00393243478830313	0.376132311676399	.	.	.	.
UCEC	CAediting_57472	chr1_45509966_+	.	.	0.00164291893792139	0.407736655732292	0.00292566206340686	0.387187679017443
SKCM	CAediting_57472	chr1_45509966_+	.	.	.	.	8.21183198264944e-05	0.383469041403584
BLCA	CAediting_57478	chr1_45509997_+	0.0377507229851688	0.149287346440115	.	.	.	.
LGG	CAediting_57478	chr1_45509997_+	1.82544332137596e-05	0.33273240432414	.	.	.	.
BRCA	CAediting_57478	chr1_45509997_+	2.29018897092808e-10	0.235189472256585	.	.	.	.
LIHC	CAediting_57478	chr1_45509997_+	0.00217507514349352	0.169709170162426	.	.	.	.
CESC	CAediting_57478	chr1_45509997_+	0.00926551749915508	0.200809378794831	.	.	.	.
LUAD	CAediting_57478	chr1_45509997_+	0.000930678898494846	0.214138909290229	.	.	.	.
COAD	CAediting_57478	chr1_45509997_+	0.00018831188154006	0.236863258176261	.	.	.	.
LUSC	CAediting_57478	chr1_45509997_+	0.0010890181219891	0.20747204564869	0.0224526406116311	0.145796886101185	0.0014617398863347	0.202231156768158
GBM	CAediting_57478	chr1_45509997_+	6.71453781983204e-05	0.433050594304798	0.0360874907969116	0.236228417557476	.	.
HNSC	CAediting_57478	chr1_45509997_+	0.0313696581640673	0.159618351500064	.	.	.	.
THCA	CAediting_57478	chr1_45509997_+	0.00886513479993764	0.171849178030748	.	.	.	.
SKCM	CAediting_57478	chr1_45509997_+	4.88456996026937e-06	0.242516851909089	.	.	.	.
READ	CAediting_57478	chr1_45509997_+	0.0115203303753432	0.290299812488512	.	.	.	.
BLCA	CAediting_57479	chr1_45509998_+	0.00514381389273178	0.182732565262295	0.0023147886787338	0.198661858734283	.	.
LGG	CAediting_57479	chr1_45509998_+	2.21233017172136e-07	0.314604903455581	.	.	.	.
BRCA	CAediting_57479	chr1_45509998_+	2.35820880582281e-11	0.23390907661647	.	.	.	.
LIHC	CAediting_57479	chr1_45509998_+	0.0308784717781056	0.120140092946481	.	.	.	.
LUAD	CAediting_57479	chr1_45509998_+	0.000887076541488687	0.204171688721134	.	.	.	.
COAD	CAediting_57479	chr1_45509998_+	2.08338937810451e-06	0.281120293615026	.	.	.	.
LUSC	CAediting_57479	chr1_45509998_+	3.72260118501969e-05	0.246417283905878	0.0190028603227827	0.141627823084342	0.0267164134382198	0.133860496250801
GBM	CAediting_57479	chr1_45509998_+	0.0070388517822221	0.265314584454996	.	.	.	.
PRAD	CAediting_57479	chr1_45509998_+	0.00975933345709145	0.160004959680668	.	.	.	.
HNSC	CAediting_57479	chr1_45509998_+	0.00103891204561582	0.222682982601307	.	.	.	.
UCEC	CAediting_57479	chr1_45509998_+	0.000555826140340377	0.209903672539811	.	.	0.0283630800273948	0.134184403431839
OV	CAediting_57479	chr1_45509998_+	0.0246017993365368	0.128270136246653	.	.	.	.
SKCM	CAediting_57479	chr1_45509998_+	1.10809908123472e-09	0.303376754888847	.	.	.	.
SARC	CAediting_57479	chr1_45509998_+	0.00243320545666142	0.309118190938278	.	.	.	.
THYM	CAediting_57479	chr1_45509998_+	0.011508067469824	0.338380261080272	.	.	.	.
BRCA	CAediting_57496	chr1_45510334_+	0.0127901805901581	0.197669950539275	.	.	.	.

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Relation with cancer stages for MMACHC

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_57470	chr1_45509956_+	0.0213612769379177	0.166899557909178
BLCA	pathologic_stage	CAediting_57478	chr1_45509997_+	0.000950401194508573	0.236048299138399
BLCA	pathologic_stage	CAediting_57479	chr1_45509998_+	0.0176034023912934	0.155740340738461
BRCA	pathologic_stage	CAediting_57437	chr1_45509674_+	0.00491097142443149	0.197185874316834
BRCA	pathologic_stage	CAediting_57458	chr1_45509900_+	0.0430853840133495	0.202731213820811
KIRP	clinical_stage	CAediting_57470	chr1_45509956_+	0.00994757322897556	0.267479777787233
KIRP	clinical_stage	CAediting_57478	chr1_45509997_+	0.0303181586832181	0.247029616535392
KIRP	clinical_stage	CAediting_57479	chr1_45509998_+	0.033685735650242	0.208482620887323
KIRP	pathologic_stage	CAediting_57470	chr1_45509956_+	0.00131138275316179	0.305350093749588
KIRP	pathologic_stage	CAediting_57479	chr1_45509998_+	0.00336979827451021	0.247038519273933
LUAD	pathologic_stage	CAediting_57436	chr1_45509673_+	0.0254142106444507	0.136271554211654
LUAD	pathologic_stage	CAediting_57478	chr1_45509997_+	0.0229311843924314	0.149301892132607
OV	clinical_stage	CAediting_57488	chr1_45510042_+	0.00556993143673742	0.335117554747289
READ	pathologic_stage	CAediting_57479	chr1_45509998_+	0.0359738051924088	-0.226515599165462
STAD	pathologic_stage	CAediting_57422	chr1_45509578_+	0.00968747679299445	0.282414902175082
TGCT	clinical_stage	CAediting_57443	chr1_45509826_+	0.0415188567506744	-0.286509299531968
TGCT	clinical_stage	CAediting_57444	chr1_45509827_+	0.036436107131474	-0.32776982493883
UCEC	clinical_stage	CAediting_57479	chr1_45509998_+	0.0412991788500115	-0.124973772216727

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Relation with survival for MMACHC

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LIHC	CAediting_57456	chr1_45509894_+	0.00773093637700129	0.0458564	870.542
LUAD	CAediting_57439	chr1_45509686_+	0.00639808052710311	0.0186504	55.2739
LUAD	CAediting_57444	chr1_45509827_+	0.00820792160457595	0.0347273	15.9581
LUSC	CAediting_57444	chr1_45509827_+	0.0067350393709219	0.0396122	0.0208947
READ	CAediting_57479	chr1_45509998_+	0.0282302539390245	0.00964233	193.482

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RelatedDrugs for MMACHC

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
MMACHC	Q9Y4U1	DB00200	Hydroxocobalamin	Methylmalonic aciduria and homocystinuria type C protein	SmallMoleculeDrug	approved
MMACHC	Q9Y4U1	DB00115	Cyanocobalamin	Methylmalonic aciduria and homocystinuria type C protein	SmallMoleculeDrug	approved\|nutraceutical

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RelatedDiseases for MMACHC

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
MMACHC	C1848561	Methylmalonic acidemia with homocystinuria	21	CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
MMACHC	C4693974	METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblC TYPE, DIGENIC	11	CLINGEN;ORPHANET
MMACHC	C1449563	Cardiomyopathy, Familial Idiopathic	1	GENOMICS_ENGLAND
MMACHC	C1855119	Methylmalonic aciduria	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene