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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: GALNS (CAeditome ID:2588)

Gene summary for GALNS

check button Gene summary
Gene informationGene symbol

GALNS

Gene ID

2588

Gene namegalactosamine (N-acetyl)-6-sulfatase
SynonymsGALNAC6S|GAS|GalN6S|MPS4A
Cytomap

16q24.3

Type of geneprotein-coding
DescriptionN-acetylgalactosamine-6-sulfataseN-acetylgalactosamine-6-sulfate sulfatasechondroitinasechondroitinsulfatasegalNAc6S sulfatasegalactosamine (N-acetyl)-6-sulfate sulfatasegalactose-6-sulfate sulfatase
Modification date20210518
UniProtAcc

P34059

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
GALNS

GO:0008484

N-acetylgalactosamine-6-sulfatase

15962010


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RNA A-to-I events for GALNS

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000141012.11

check button RNA A-to-I editing events in Cancer.
CAediting_1143519(88814601, -), CAediting_1143520(88814662, -), CAediting_1143521(88814666, -), CAediting_1143522(88814679, -), CAediting_1143523(88814683, -), CAediting_1143524(88814684, -), CAediting_1143525(88814690, -), CAediting_1143526(88814718, -), CAediting_1143527(88814761, -), CAediting_1143528(88814765, -), CAediting_1143529(88814774, -), CAediting_1143530(88814850, -), CAediting_1143531(88814863, -), CAediting_1143532(88814871, -), CAediting_1143533(88814872, -), CAediting_1143534(88814878, -), CAediting_1143535(88814958, -), CAediting_1143536(88815014, -), CAediting_1143537(88830065, -), CAediting_1143538(88830068, -), CAediting_1143539(88833567, -), CAediting_1143540(88833568, -), CAediting_1143541(88833622, -), CAediting_1143542(88845183, -), CAediting_1143543(88845198, -), CAediting_1143544(88845225, -), CAediting_1143545(88845235, -), CAediting_1143546(88845275, -), CAediting_1143547(88845504, -), CAediting_1143548(88845555, -), CAediting_1143549(88845562, -), CAediting_1143550(88845657, -), CAediting_1143551(88845888, -), CAediting_1143552(88846545, -), CAediting_1143553(88846546, -), CAediting_1143554(88846551, -), CAediting_1143555(88846594, -), CAediting_1143556(88846596, -), CAediting_1143557(88846625, -), CAediting_1143558(88846626, -), CAediting_1143559(88846627, -), CAediting_1143560(88846631, -), CAediting_1143561(88846633, -), CAediting_1143562(88846638, -), CAediting_1143563(88846639, -), CAediting_1143564(88846647, -), CAediting_1143565(88846654, -), CAediting_1143566(88846658, -), CAediting_1143567(88846671, -), CAediting_1143568(88846675, -), CAediting_1143569(88846680, -), CAediting_1143570(88846681, -), CAediting_1143571(88846692, -), CAediting_1143572(88846707, -), CAediting_1143573(88846711, -), CAediting_1143574(88846713, -), CAediting_1143575(88846719, -), CAediting_1143576(88846720, -), CAediting_1143577(88846721, -), CAediting_1143578(88846722, -), CAediting_1143579(88846736, -), CAediting_1143580(88846737, -), CAediting_1143581(88846738, -), CAediting_1143582(88846744, -), CAediting_1143583(88846746, -), CAediting_1143584(88846747, -), CAediting_1143585(88846785, -), CAediting_1143586(88846810, -), CAediting_1143587(88846815, -), CAediting_1143588(88846822, -), CAediting_1143589(88847191, -), CAediting_1143590(88847205, -), CAediting_1143591(88847249, -), CAediting_1143592(88847259, -), CAediting_1143593(88847262, -), CAediting_1143594(88847271, -), CAediting_1143595(88847319, -), CAediting_1143596(88848386, -), CAediting_1143597(88848387, -), CAediting_1143598(88848405, -), CAediting_1143599(88848444, -), CAediting_1143600(88848509, -), CAediting_1143601(88848511, -), CAediting_1143602(88849182, -), CAediting_1143603(88849183, -), CAediting_1143604(88849217, -), CAediting_1143605(88849253, -), CAediting_1143606(88849307, -), CAediting_1143607(88849413, -), CAediting_1143608(88849422, -), CAediting_1143609(88849423, -), CAediting_1143610(88849425, -), CAediting_1143611(88849444, -), CAediting_1143612(88849449, -), CAediting_1143613(88849454, -), CAediting_1143614(88849475, -), CAediting_1143615(88849490, -), CAediting_1143616(88849491, -), CAediting_1143617(88849559, -), CAediting_1143618(88849567, -), CAediting_1143619(88849617, -), CAediting_1143620(88849618, -), CAediting_1143621(88849619, -), CAediting_1143622(88849626, -), CAediting_1143623(88849703, -), CAediting_1143624(88851296, -), CAediting_1143625(88853071, -),

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RNA editing positional annotations for GALNS using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1143519chr16_88814601_-ncRNA_intronic
CAediting_1143520chr16_88814662_-ncRNA_intronic
CAediting_1143521chr16_88814666_-ncRNA_intronic
CAediting_1143522chr16_88814679_-ncRNA_intronic
CAediting_1143523chr16_88814683_-ncRNA_intronic
CAediting_1143524chr16_88814684_-ncRNA_intronic
CAediting_1143525chr16_88814690_-ncRNA_intronic
CAediting_1143526chr16_88814718_-ncRNA_intronic
CAediting_1143527chr16_88814761_-ncRNA_intronic
CAediting_1143528chr16_88814765_-ncRNA_intronic
CAediting_1143529chr16_88814774_-ncRNA_intronic
CAediting_1143530chr16_88814850_-ncRNA_intronic
CAediting_1143531chr16_88814863_-ncRNA_intronic
CAediting_1143532chr16_88814871_-ncRNA_intronic
CAediting_1143533chr16_88814872_-ncRNA_intronic
CAediting_1143534chr16_88814878_-ncRNA_intronic
CAediting_1143535chr16_88814958_-ncRNA_intronic
CAediting_1143536chr16_88815014_-ncRNA_intronic
CAediting_1143537chr16_88830065_-ncRNA_intronic
CAediting_1143538chr16_88830068_-ncRNA_intronic
CAediting_1143539chr16_88833567_-ncRNA_intronic
CAediting_1143540chr16_88833568_-ncRNA_intronic
CAediting_1143541chr16_88833622_-ncRNA_intronic
CAediting_1143542chr16_88845183_-ncRNA_exonic
CAediting_1143543chr16_88845198_-ncRNA_exonic
CAediting_1143544chr16_88845225_-ncRNA_exonic
CAediting_1143545chr16_88845235_-ncRNA_exonic
CAediting_1143546chr16_88845275_-ncRNA_exonic
CAediting_1143547chr16_88845504_-ncRNA_exonic
CAediting_1143548chr16_88845555_-ncRNA_exonic
CAediting_1143549chr16_88845562_-ncRNA_exonic
CAediting_1143550chr16_88845657_-ncRNA_intronic
CAediting_1143551chr16_88845888_-ncRNA_intronic
CAediting_1143552chr16_88846545_-ncRNA_intronic
CAediting_1143553chr16_88846546_-ncRNA_intronic
CAediting_1143554chr16_88846551_-ncRNA_intronic
CAediting_1143555chr16_88846594_-ncRNA_intronic
CAediting_1143556chr16_88846596_-ncRNA_intronic
CAediting_1143557chr16_88846625_-ncRNA_intronic
CAediting_1143558chr16_88846626_-ncRNA_intronic
CAediting_1143559chr16_88846627_-ncRNA_intronic
CAediting_1143560chr16_88846631_-ncRNA_intronic
CAediting_1143561chr16_88846633_-ncRNA_intronic
CAediting_1143562chr16_88846638_-ncRNA_intronic
CAediting_1143563chr16_88846639_-ncRNA_intronic
CAediting_1143564chr16_88846647_-ncRNA_intronic
CAediting_1143565chr16_88846654_-ncRNA_intronic
CAediting_1143566chr16_88846658_-ncRNA_intronic
CAediting_1143567chr16_88846671_-ncRNA_intronic
CAediting_1143568chr16_88846675_-ncRNA_intronic
CAediting_1143569chr16_88846680_-ncRNA_intronic
CAediting_1143570chr16_88846681_-ncRNA_intronic
CAediting_1143571chr16_88846692_-ncRNA_intronic
CAediting_1143572chr16_88846707_-ncRNA_intronic
CAediting_1143573chr16_88846711_-ncRNA_intronic
CAediting_1143574chr16_88846713_-ncRNA_intronic
CAediting_1143575chr16_88846719_-ncRNA_intronic
CAediting_1143576chr16_88846720_-ncRNA_intronic
CAediting_1143577chr16_88846721_-ncRNA_intronic
CAediting_1143578chr16_88846722_-ncRNA_intronic
CAediting_1143579chr16_88846736_-ncRNA_intronic
CAediting_1143580chr16_88846737_-ncRNA_intronic
CAediting_1143581chr16_88846738_-ncRNA_intronic
CAediting_1143582chr16_88846744_-ncRNA_intronic
CAediting_1143583chr16_88846746_-ncRNA_intronic
CAediting_1143584chr16_88846747_-ncRNA_intronic
CAediting_1143585chr16_88846785_-ncRNA_intronic
CAediting_1143586chr16_88846810_-ncRNA_intronic
CAediting_1143587chr16_88846815_-ncRNA_intronic
CAediting_1143588chr16_88846822_-ncRNA_intronic
CAediting_1143589chr16_88847191_-ncRNA_intronic
CAediting_1143590chr16_88847205_-ncRNA_intronic
CAediting_1143591chr16_88847249_-ncRNA_intronic
CAediting_1143592chr16_88847259_-ncRNA_intronic
CAediting_1143593chr16_88847262_-ncRNA_intronic
CAediting_1143594chr16_88847271_-ncRNA_intronic
CAediting_1143595chr16_88847319_-ncRNA_intronic
CAediting_1143596chr16_88848386_-ncRNA_intronic
CAediting_1143597chr16_88848387_-ncRNA_intronic
CAediting_1143598chr16_88848405_-ncRNA_intronic
CAediting_1143599chr16_88848444_-ncRNA_intronic
CAediting_1143600chr16_88848509_-ncRNA_intronic
CAediting_1143601chr16_88848511_-ncRNA_intronic
CAediting_1143602chr16_88849182_-ncRNA_intronic
CAediting_1143603chr16_88849183_-ncRNA_intronic
CAediting_1143604chr16_88849217_-ncRNA_intronic
CAediting_1143605chr16_88849253_-ncRNA_intronic
CAediting_1143606chr16_88849307_-ncRNA_intronic
CAediting_1143607chr16_88849413_-ncRNA_intronic
CAediting_1143608chr16_88849422_-ncRNA_intronic
CAediting_1143609chr16_88849423_-ncRNA_intronic
CAediting_1143610chr16_88849425_-ncRNA_intronic
CAediting_1143611chr16_88849444_-ncRNA_intronic
CAediting_1143612chr16_88849449_-ncRNA_intronic
CAediting_1143613chr16_88849454_-ncRNA_intronic
CAediting_1143614chr16_88849475_-ncRNA_intronic
CAediting_1143615chr16_88849490_-ncRNA_intronic
CAediting_1143616chr16_88849491_-ncRNA_intronic
CAediting_1143617chr16_88849559_-ncRNA_intronic
CAediting_1143618chr16_88849567_-ncRNA_intronic
CAediting_1143619chr16_88849617_-ncRNA_intronic
CAediting_1143620chr16_88849618_-ncRNA_intronic
CAediting_1143621chr16_88849619_-ncRNA_intronic
CAediting_1143622chr16_88849626_-ncRNA_intronic
CAediting_1143623chr16_88849703_-ncRNA_intronic
CAediting_1143624chr16_88851296_-ncRNA_intronic
CAediting_1143625chr16_88853071_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1143519chr16_88814601_-SINEAluAluSg
CAediting_1143520chr16_88814662_-SINEAluAluSg
CAediting_1143521chr16_88814666_-SINEAluAluSg
CAediting_1143522chr16_88814679_-SINEAluAluSg
CAediting_1143523chr16_88814683_-SINEAluAluSg
CAediting_1143524chr16_88814684_-SINEAluAluSg
CAediting_1143525chr16_88814690_-SINEAluAluSg
CAediting_1143526chr16_88814718_-SINEAluAluSg
CAediting_1143527chr16_88814761_-SINEAluAluSg
CAediting_1143528chr16_88814765_-SINEAluAluSg
CAediting_1143529chr16_88814774_-SINEAluAluSg
CAediting_1143530chr16_88814850_-SINEAluAluSg
CAediting_1143531chr16_88814863_-SINEAluAluSg
CAediting_1143532chr16_88814871_-SINEAluAluSg
CAediting_1143533chr16_88814872_-SINEAluAluSg
CAediting_1143534chr16_88814878_-SINEAluAluSg
CAediting_1143535chr16_88814958_-SINEAluAluSx
CAediting_1143536chr16_88815014_-SINEAluAluSx
CAediting_1143537chr16_88830065_-SINEAluAluSc
CAediting_1143538chr16_88830068_-SINEAluAluSc
CAediting_1143539chr16_88833567_-SINEAluAluY
CAediting_1143540chr16_88833568_-SINEAluAluY
CAediting_1143541chr16_88833622_-SINEAluAluY
CAediting_1143542chr16_88845183_-SINEAluAluSc8
CAediting_1143543chr16_88845198_-SINEAluAluSc8
CAediting_1143544chr16_88845225_-SINEAluAluSc8
CAediting_1143545chr16_88845235_-SINEAluAluSc8
CAediting_1143546chr16_88845275_-SINEAluAluSc8
CAediting_1143547chr16_88845504_-SINEAluAluSg
CAediting_1143548chr16_88845555_-SINEAluAluSg
CAediting_1143549chr16_88845562_-SINEAluAluSg
CAediting_1143550chr16_88845657_-SINEAluAluSg
CAediting_1143551chr16_88845888_-SINEAluAluJr
CAediting_1143552chr16_88846545_-SINEAluAluSq2
CAediting_1143553chr16_88846546_-SINEAluAluSq2
CAediting_1143554chr16_88846551_-SINEAluAluSq2
CAediting_1143555chr16_88846594_-SINEAluAluSq2
CAediting_1143556chr16_88846596_-SINEAluAluSq2
CAediting_1143557chr16_88846625_-SINEAluAluSq2
CAediting_1143558chr16_88846626_-SINEAluAluSq2
CAediting_1143559chr16_88846627_-SINEAluAluSq2
CAediting_1143560chr16_88846631_-SINEAluAluSq2
CAediting_1143561chr16_88846633_-SINEAluAluSq2
CAediting_1143562chr16_88846638_-SINEAluAluSq2
CAediting_1143563chr16_88846639_-SINEAluAluSq2
CAediting_1143564chr16_88846647_-SINEAluAluSq2
CAediting_1143565chr16_88846654_-SINEAluAluSq2
CAediting_1143566chr16_88846658_-SINEAluAluSq2
CAediting_1143567chr16_88846671_-SINEAluAluSq2
CAediting_1143568chr16_88846675_-SINEAluAluSq2
CAediting_1143569chr16_88846680_-SINEAluAluSq2
CAediting_1143570chr16_88846681_-SINEAluAluSq2
CAediting_1143571chr16_88846692_-SINEAluAluSq2
CAediting_1143572chr16_88846707_-SINEAluAluSq2
CAediting_1143573chr16_88846711_-SINEAluAluSq2
CAediting_1143574chr16_88846713_-SINEAluAluSq2
CAediting_1143575chr16_88846719_-SINEAluAluSq2
CAediting_1143576chr16_88846720_-SINEAluAluSq2
CAediting_1143577chr16_88846721_-SINEAluAluSq2
CAediting_1143578chr16_88846722_-SINEAluAluSq2
CAediting_1143579chr16_88846736_-SINEAluAluSq2
CAediting_1143580chr16_88846737_-SINEAluAluSq2
CAediting_1143581chr16_88846738_-SINEAluAluSq2
CAediting_1143582chr16_88846744_-SINEAluAluSq2
CAediting_1143583chr16_88846746_-SINEAluAluSq2
CAediting_1143584chr16_88846747_-SINEAluAluSq2
CAediting_1143585chr16_88846785_-SINEAluAluSq2
CAediting_1143586chr16_88846810_-SINEAluAluSq2
CAediting_1143587chr16_88846815_-SINEAluAluSq2
CAediting_1143588chr16_88846822_-SINEAluAluSq2
CAediting_1143589chr16_88847191_-SINEAluAluJb
CAediting_1143590chr16_88847205_-SINEAluAluJb
CAediting_1143591chr16_88847249_-SINEAluAluJb
CAediting_1143592chr16_88847259_-SINEAluAluJb
CAediting_1143593chr16_88847262_-SINEAluAluJb
CAediting_1143594chr16_88847271_-SINEAluAluJb
CAediting_1143595chr16_88847319_-SINEAluAluJb
CAediting_1143596chr16_88848386_-SINEAluAluY
CAediting_1143597chr16_88848387_-SINEAluAluY
CAediting_1143598chr16_88848405_-SINEAluAluY
CAediting_1143599chr16_88848444_-SINEAluAluY
CAediting_1143600chr16_88848509_-SINEAluAluY
CAediting_1143601chr16_88848511_-SINEAluAluY
CAediting_1143602chr16_88849182_-SINEAluAluJb
CAediting_1143603chr16_88849183_-SINEAluAluJb
CAediting_1143604chr16_88849217_-SINEAluAluJb
CAediting_1143605chr16_88849253_-SINEAluAluJb
CAediting_1143606chr16_88849307_-SINEAluAluSx1
CAediting_1143607chr16_88849413_-SINEAluAluSx1
CAediting_1143608chr16_88849422_-SINEAluAluSx1
CAediting_1143609chr16_88849423_-SINEAluAluSx1
CAediting_1143610chr16_88849425_-SINEAluAluSx1
CAediting_1143611chr16_88849444_-SINEAluAluSx1
CAediting_1143612chr16_88849449_-SINEAluAluSx1
CAediting_1143613chr16_88849454_-SINEAluAluSx1
CAediting_1143614chr16_88849475_-SINEAluAluSx1
CAediting_1143615chr16_88849490_-SINEAluAluSx1
CAediting_1143616chr16_88849491_-SINEAluAluSx1
CAediting_1143617chr16_88849559_-SINEAluAluSx1
CAediting_1143618chr16_88849567_-SINEAluAluSx1
CAediting_1143619chr16_88849617_-SINEAluAluJb
CAediting_1143620chr16_88849618_-SINEAluAluJb
CAediting_1143621chr16_88849619_-SINEAluAluJb
CAediting_1143622chr16_88849626_-SINEAluAluJb
CAediting_1143623chr16_88849703_-SINEAluAluJb
CAediting_1143624chr16_88851296_-SINEAluFLAM_C
CAediting_1143625chr16_88853071_-SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for GALNS

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000141012.11.GALNS.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000141012.11.GALNS.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GALNS

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for GALNS

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GALNS

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000141012.11ENST00000567525hsa-miR-1304-3p88835729888357357mer-m88883572888835751141-19.39
CAediting_748296chr10_51299626_+ENSG00000141012.11ENST00000567525hsa-miR-605-3p88835231888352388mer-1a8883523188835252140-14.1
CAediting_393chr1_1167164_+ENSG00000141012.11ENST00000567525hsa-miR-200b-3p88835316888353227mer-m88883531588835335147-12.12
CAediting_748296chr10_51299626_+ENSG00000141012.11ENST00000567525hsa-miR-605-3p88832031888320377mer-m88883203088832051140-13.51
CAediting_846604chr11_93733708_-ENSG00000141012.11ENST00000568613hsa-miR-1304-3p88835729888357357mer-m88883572888835751141-19.39
CAediting_748296chr10_51299626_+ENSG00000141012.11ENST00000568613hsa-miR-605-3p88835231888352388mer-1a8883523188835252140-14.1
CAediting_393chr1_1167164_+ENSG00000141012.11ENST00000568613hsa-miR-200b-3p88835316888353227mer-m88883531588835335147-12.12
CAediting_748296chr10_51299626_+ENSG00000141012.11ENST00000568613hsa-miR-605-3p88832031888320377mer-m88883203088832051140-13.51
CAediting_688081chr9_63819627_+ENSG00000141012.11ENST00000569433hsa-miR-4477b88856104888561107mer-m88885610388856124140-10.51
CAediting_1368054chr19_46709310_-ENSG00000141012.11ENST00000567525hsa-miR-320e88818030888180378mer-1a8881803088818048149-20.45
CAediting_604450chr7_133034877_-ENSG00000141012.11ENST00000567525hsa-miR-365488818068888180758mer-1a8881806888818085159-25.57
CAediting_1054808chr15_66496985_-ENSG00000141012.11ENST00000568613hsa-miR-451288837745888377517mer-1a8883774588837765140-19.38
CAediting_86358chr1_109598906_+ENSG00000141012.11ENST00000568613hsa-miR-197-5p88837736888377427mer-m88883773588837758152-28.3
CAediting_1368054chr19_46709310_-ENSG00000141012.11ENST00000568613hsa-miR-320e88818030888180378mer-1a8881803088818048149-20.45
CAediting_604450chr7_133034877_-ENSG00000141012.11ENST00000568613hsa-miR-365488818068888180758mer-1a8881806888818085159-25.57
CAediting_1351755chr19_40282625_-ENSG00000141012.11ENST00000569433hsa-miR-64188856161888561677mer-m88885616088856183140-13.77
CAediting_442554chr5_154685830_+ENSG00000141012.11ENST00000569433hsa-miR-130388856000888560067mer-m88885599988856021154-21.51
CAediting_468389chr6_31355314_-ENSG00000141012.11ENST00000268695hsa-miR-6891-5p88814251888142577mer-m88881424788814265157-26.27
CAediting_468389chr6_31355314_-ENSG00000141012.11ENST00000268695hsa-miR-6891-5p88814248888142547mer-m88881424788814265157-26.27
CAediting_468389chr6_31355314_-ENSG00000141012.11ENST00000268695hsa-miR-6891-5p88814215888142217mer-m88881421488814232153-22.88
CAediting_1524209chrX_134546392_-ENSG00000141012.11ENST00000567525hsa-miR-503-5p88835235888352417mer-m88883523488835256140-18.65
CAediting_468389chr6_31355314_-ENSG00000141012.11ENST00000567525hsa-miR-6891-5p88814251888142577mer-m88881424788814265157-26.27
CAediting_468389chr6_31355314_-ENSG00000141012.11ENST00000567525hsa-miR-6891-5p88814248888142547mer-m88881424788814265157-26.27
CAediting_468389chr6_31355314_-ENSG00000141012.11ENST00000567525hsa-miR-6891-5p88814215888142217mer-m88881421488814232153-22.88
CAediting_1524209chrX_134546392_-ENSG00000141012.11ENST00000568613hsa-miR-503-5p88835235888352417mer-m88883523488835256140-18.65

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GALNS

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for GALNS

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for GALNS

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for GALNS

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for GALNS

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GALNS

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
GALNSC0086651Mucopolysaccharidosis, MPS-IV-A14CTD_human;GENOMICS_ENGLAND;UNIPROT
GALNSC0026707Mucopolysaccharidosis IV2CTD_human;GENOMICS_ENGLAND
GALNSC0021368Inflammation1CTD_human