|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: TNFAIP8 (CAeditome ID:25816) |
Gene summary for TNFAIP8 |
Gene summary |
Gene information | Gene symbol | TNFAIP8 | Gene ID | 25816 |
Gene name | TNF alpha induced protein 8 | |
Synonyms | GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 | |
Cytomap | 5q23.1 | |
Type of gene | protein-coding | |
Description | tumor necrosis factor alpha-induced protein 8NF-kappa-B-inducible DED-containing proteinTNF-induced protein GG2-1head and neck tumor and metastasis-related proteintumor necrosis factor, alpha induced protein 8 | |
Modification date | 20210518 | |
UniProtAcc | O95379 | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
TNFAIP8 | GO:0005654 | Tumor necrosis factor alpha-induced protein 8 | 0000052 |
TNFAIP8 | GO:0005737 | Tumor necrosis factor alpha-induced protein 8 | 14724590 |
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RNA A-to-I events for TNFAIP8 |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000145779.7 |
RNA A-to-I editing events in Cancer. |
CAediting_423610(119279594, +), CAediting_423611(119279651, +), CAediting_423612(119283376, +), CAediting_423613(119283377, +), CAediting_423614(119286572, +), CAediting_423615(119304219, +), CAediting_423616(119308610, +), CAediting_423617(119308611, +), CAediting_423618(119308640, +), CAediting_423619(119308741, +), CAediting_423620(119308742, +), CAediting_423621(119308804, +), CAediting_423622(119310557, +), CAediting_423623(119310573, +), CAediting_423624(119310707, +), CAediting_423625(119310712, +), CAediting_423626(119310729, +), CAediting_423627(119310747, +), CAediting_423628(119310766, +), CAediting_423629(119311047, +), CAediting_423630(119311084, +), CAediting_423631(119311090, +), CAediting_423632(119311102, +), CAediting_423633(119311109, +), CAediting_423634(119311127, +), CAediting_423635(119311135, +), CAediting_423636(119311140, +), CAediting_423637(119311147, +), CAediting_423638(119311152, +), CAediting_423639(119311168, +), CAediting_423640(119311189, +), CAediting_423641(119311227, +), CAediting_423642(119311234, +), CAediting_423643(119311286, +), CAediting_423644(119311430, +), CAediting_423645(119311436, +), CAediting_423646(119311442, +), CAediting_423647(119311539, +), CAediting_423648(119311540, +), CAediting_423649(119311541, +), CAediting_423650(119311544, +), CAediting_423651(119311545, +), CAediting_423652(119311574, +), CAediting_423653(119311591, +), CAediting_423654(119311595, +), CAediting_423655(119311604, +), CAediting_423656(119311610, +), CAediting_423657(119311614, +), CAediting_423658(119311617, +), CAediting_423659(119311638, +), CAediting_423660(119311639, +), CAediting_423661(119311671, +), CAediting_423662(119312652, +), CAediting_423663(119312665, +), CAediting_423664(119312666, +), CAediting_423665(119314105, +), CAediting_423666(119314143, +), CAediting_423667(119315258, +), CAediting_423668(119316234, +), CAediting_423669(119316239, +), CAediting_423670(119316247, +), CAediting_423671(119316272, +), CAediting_423672(119316394, +), CAediting_423673(119316427, +), CAediting_423674(119317692, +), CAediting_423675(119317700, +), CAediting_423676(119317738, +), CAediting_423677(119317740, +), CAediting_423678(119318321, +), CAediting_423679(119318347, +), CAediting_423680(119318531, +), CAediting_423681(119318536, +), CAediting_423682(119319147, +), CAediting_423683(119319153, +), CAediting_423684(119319154, +), CAediting_423685(119319170, +), CAediting_423686(119319176, +), CAediting_423687(119319189, +), CAediting_423688(119319195, +), CAediting_423689(119319199, +), CAediting_423690(119319219, +), CAediting_423691(119319231, +), CAediting_423692(119320961, +), CAediting_423693(119320962, +), CAediting_423694(119324104, +), CAediting_423695(119324110, +), CAediting_423696(119324113, +), CAediting_423697(119324114, +), CAediting_423698(119324128, +), CAediting_423699(119324132, +), CAediting_423700(119324154, +), CAediting_423701(119324155, +), CAediting_423702(119324160, +), CAediting_423703(119324177, +), CAediting_423704(119324181, +), CAediting_423705(119324185, +), CAediting_423706(119324187, +), CAediting_423707(119324190, +), CAediting_423708(119324196, +), CAediting_423709(119324200, +), CAediting_423710(119324203, +), CAediting_423711(119324216, +), CAediting_423712(119324220, +), CAediting_423713(119324225, +), CAediting_423714(119324245, +), CAediting_423715(119324258, +), CAediting_423716(119324972, +), CAediting_423717(119324978, +), CAediting_423718(119324979, +), CAediting_423719(119325052, +), CAediting_423720(119325448, +), CAediting_423721(119325467, +), CAediting_423722(119325528, +), CAediting_423723(119325577, +), CAediting_423724(119325587, +), CAediting_423725(119325589, +), CAediting_423726(119325630, +), CAediting_423727(119325647, +), CAediting_423728(119325650, +), CAediting_423729(119325655, +), CAediting_423730(119325722, +), CAediting_423731(119348617, +), CAediting_423732(119348625, +), CAediting_423733(119348626, +), CAediting_423734(119348631, +), CAediting_423735(119348671, +), CAediting_423736(119348679, +), CAediting_423737(119348680, +), CAediting_423738(119348733, +), CAediting_423739(119348737, +), CAediting_423740(119348749, +), CAediting_423741(119348759, +), CAediting_423742(119348765, +), CAediting_423743(119348786, +), CAediting_423744(119348837, +), CAediting_423745(119348855, +), CAediting_423746(119348864, +), CAediting_423747(119351148, +), CAediting_423748(119351149, +), CAediting_423749(119351156, +), CAediting_423750(119351237, +), CAediting_423751(119351248, +), CAediting_423752(119351262, +), CAediting_423753(119362522, +), CAediting_423754(119362524, +), CAediting_423755(119362540, +), CAediting_423756(119362589, +), CAediting_423757(119362595, +), CAediting_423758(119362646, +), CAediting_423759(119362647, +), CAediting_423760(119362665, +), CAediting_423761(119364474, +), CAediting_423762(119364519, +), CAediting_423763(119364538, +), CAediting_423764(119364545, +), CAediting_423765(119371771, +), CAediting_423766(119376373, +), CAediting_423767(119377220, +), CAediting_423768(119378944, +), CAediting_423769(119379007, +), CAediting_423770(119379717, +), CAediting_423771(119379720, +), CAediting_423772(119390912, +), CAediting_423773(119391680, +), CAediting_423774(119392586, +), CAediting_423775(119394655, +), CAediting_423776(119394657, +), CAediting_423777(119394658, +), CAediting_423778(119394681, +), CAediting_423779(119394686, +), CAediting_423780(119394687, +), CAediting_423781(119394706, +), CAediting_423782(119394746, +), CAediting_423783(119394781, +), CAediting_423784(119394787, +), CAediting_423785(119394804, +), CAediting_423786(119394816, +), CAediting_423787(119394829, +), CAediting_423788(119394841, +), CAediting_423789(119394842, +), CAediting_423790(119394843, +), CAediting_423791(119394868, +), CAediting_423792(119394869, +), CAediting_423793(119396737, +), CAediting_423794(119396738, +), CAediting_423795(119396743, +), CAediting_423796(119396773, +), CAediting_423797(119396778, +), CAediting_423798(119396783, +), CAediting_423799(119396786, +), CAediting_423800(119396792, +), CAediting_423801(119396794, +), CAediting_423802(119396797, +), CAediting_423803(119396806, +), CAediting_423804(119396807, +), CAediting_423805(119396816, +), CAediting_423806(119396817, +), CAediting_423807(119396828, +), CAediting_423808(119396832, +), CAediting_423809(119396833, +), CAediting_423810(119396834, +), CAediting_423811(119396835, +), CAediting_423812(119396837, +), CAediting_423813(119396842, +), CAediting_423814(119396851, +), CAediting_423815(119396853, +), CAediting_423816(119396863, +), CAediting_423817(119396873, +), CAediting_423818(119396874, +), CAediting_423819(119396879, +), CAediting_423820(119396883, +), CAediting_423821(119396890, +), CAediting_423822(119396895, +), CAediting_423823(119396896, +), CAediting_423824(119396900, +), CAediting_423825(119396903, +), CAediting_423826(119396905, +), CAediting_423827(119396906, +), CAediting_423828(119396914, +), CAediting_423829(119396915, +), CAediting_423830(119396922, +), CAediting_423831(119396926, +), CAediting_423832(119396928, +), CAediting_423833(119396935, +), CAediting_423834(119396939, +), CAediting_423835(119396946, +), CAediting_423836(119396951, +), CAediting_423837(119396954, +), CAediting_423838(119396964, +), CAediting_423839(119396997, +), CAediting_423840(119396998, +), CAediting_423841(119398425, +), CAediting_423842(119398426, +), CAediting_423843(119398432, +), CAediting_423844(119398466, +), CAediting_423845(119398472, +), CAediting_423846(119398480, +), CAediting_423847(119398482, +), CAediting_423848(119398495, +), CAediting_423849(119398505, +), CAediting_423850(119398519, +), CAediting_423851(119398520, +), CAediting_423852(119398521, +), CAediting_423853(119398522, +), CAediting_423854(119398525, +), CAediting_423855(119398528, +), CAediting_423856(119398543, +), CAediting_423857(119398559, +), CAediting_423858(119398560, +), CAediting_423859(119398586, +), CAediting_423860(119398592, +), CAediting_423861(119398595, +), CAediting_423862(119398600, +), CAediting_423863(119398601, +), CAediting_423864(119398605, +), CAediting_423865(119398612, +), CAediting_423866(119398614, +), CAediting_423867(119398630, +), CAediting_423868(119398637, +), |
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RNA editing positional annotations for TNFAIP8 using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_423610 | chr5_119279594_+ | intronic |
CAediting_423611 | chr5_119279651_+ | intronic |
CAediting_423612 | chr5_119283376_+ | intronic |
CAediting_423613 | chr5_119283377_+ | intronic |
CAediting_423614 | chr5_119286572_+ | intronic |
CAediting_423615 | chr5_119304219_+ | intronic |
CAediting_423616 | chr5_119308610_+ | intronic |
CAediting_423617 | chr5_119308611_+ | intronic |
CAediting_423618 | chr5_119308640_+ | intronic |
CAediting_423619 | chr5_119308741_+ | intronic |
CAediting_423620 | chr5_119308742_+ | intronic |
CAediting_423621 | chr5_119308804_+ | intronic |
CAediting_423622 | chr5_119310557_+ | intronic |
CAediting_423623 | chr5_119310573_+ | intronic |
CAediting_423624 | chr5_119310707_+ | intronic |
CAediting_423625 | chr5_119310712_+ | intronic |
CAediting_423626 | chr5_119310729_+ | intronic |
CAediting_423627 | chr5_119310747_+ | intronic |
CAediting_423628 | chr5_119310766_+ | intronic |
CAediting_423629 | chr5_119311047_+ | intronic |
CAediting_423630 | chr5_119311084_+ | intronic |
CAediting_423631 | chr5_119311090_+ | intronic |
CAediting_423632 | chr5_119311102_+ | intronic |
CAediting_423633 | chr5_119311109_+ | intronic |
CAediting_423634 | chr5_119311127_+ | intronic |
CAediting_423635 | chr5_119311135_+ | intronic |
CAediting_423636 | chr5_119311140_+ | intronic |
CAediting_423637 | chr5_119311147_+ | intronic |
CAediting_423638 | chr5_119311152_+ | intronic |
CAediting_423639 | chr5_119311168_+ | intronic |
CAediting_423640 | chr5_119311189_+ | intronic |
CAediting_423641 | chr5_119311227_+ | intronic |
CAediting_423642 | chr5_119311234_+ | intronic |
CAediting_423643 | chr5_119311286_+ | intronic |
CAediting_423644 | chr5_119311430_+ | intronic |
CAediting_423645 | chr5_119311436_+ | intronic |
CAediting_423646 | chr5_119311442_+ | intronic |
CAediting_423647 | chr5_119311539_+ | intronic |
CAediting_423648 | chr5_119311540_+ | intronic |
CAediting_423649 | chr5_119311541_+ | intronic |
CAediting_423650 | chr5_119311544_+ | intronic |
CAediting_423651 | chr5_119311545_+ | intronic |
CAediting_423652 | chr5_119311574_+ | intronic |
CAediting_423653 | chr5_119311591_+ | intronic |
CAediting_423654 | chr5_119311595_+ | intronic |
CAediting_423655 | chr5_119311604_+ | intronic |
CAediting_423656 | chr5_119311610_+ | intronic |
CAediting_423657 | chr5_119311614_+ | intronic |
CAediting_423658 | chr5_119311617_+ | intronic |
CAediting_423659 | chr5_119311638_+ | intronic |
CAediting_423660 | chr5_119311639_+ | intronic |
CAediting_423661 | chr5_119311671_+ | intronic |
CAediting_423662 | chr5_119312652_+ | intronic |
CAediting_423663 | chr5_119312665_+ | intronic |
CAediting_423664 | chr5_119312666_+ | intronic |
CAediting_423665 | chr5_119314105_+ | intronic |
CAediting_423666 | chr5_119314143_+ | intronic |
CAediting_423667 | chr5_119315258_+ | intronic |
CAediting_423668 | chr5_119316234_+ | UTR5 |
CAediting_423669 | chr5_119316239_+ | UTR5 |
CAediting_423670 | chr5_119316247_+ | UTR5 |
CAediting_423671 | chr5_119316272_+ | UTR5 |
CAediting_423672 | chr5_119316394_+ | intronic |
CAediting_423673 | chr5_119316427_+ | intronic |
CAediting_423674 | chr5_119317692_+ | intronic |
CAediting_423675 | chr5_119317700_+ | intronic |
CAediting_423676 | chr5_119317738_+ | intronic |
CAediting_423677 | chr5_119317740_+ | intronic |
CAediting_423678 | chr5_119318321_+ | intronic |
CAediting_423679 | chr5_119318347_+ | intronic |
CAediting_423680 | chr5_119318531_+ | intronic |
CAediting_423681 | chr5_119318536_+ | intronic |
CAediting_423682 | chr5_119319147_+ | intronic |
CAediting_423683 | chr5_119319153_+ | intronic |
CAediting_423684 | chr5_119319154_+ | intronic |
CAediting_423685 | chr5_119319170_+ | intronic |
CAediting_423686 | chr5_119319176_+ | intronic |
CAediting_423687 | chr5_119319189_+ | intronic |
CAediting_423688 | chr5_119319195_+ | intronic |
CAediting_423689 | chr5_119319199_+ | intronic |
CAediting_423690 | chr5_119319219_+ | intronic |
CAediting_423691 | chr5_119319231_+ | intronic |
CAediting_423692 | chr5_119320961_+ | intronic |
CAediting_423693 | chr5_119320962_+ | intronic |
CAediting_423694 | chr5_119324104_+ | intronic |
CAediting_423695 | chr5_119324110_+ | intronic |
CAediting_423696 | chr5_119324113_+ | intronic |
CAediting_423697 | chr5_119324114_+ | intronic |
CAediting_423698 | chr5_119324128_+ | intronic |
CAediting_423699 | chr5_119324132_+ | intronic |
CAediting_423700 | chr5_119324154_+ | intronic |
CAediting_423701 | chr5_119324155_+ | intronic |
CAediting_423702 | chr5_119324160_+ | intronic |
CAediting_423703 | chr5_119324177_+ | intronic |
CAediting_423704 | chr5_119324181_+ | intronic |
CAediting_423705 | chr5_119324185_+ | intronic |
CAediting_423706 | chr5_119324187_+ | intronic |
CAediting_423707 | chr5_119324190_+ | intronic |
CAediting_423708 | chr5_119324196_+ | intronic |
CAediting_423709 | chr5_119324200_+ | intronic |
CAediting_423710 | chr5_119324203_+ | intronic |
CAediting_423711 | chr5_119324216_+ | intronic |
CAediting_423712 | chr5_119324220_+ | intronic |
CAediting_423713 | chr5_119324225_+ | intronic |
CAediting_423714 | chr5_119324245_+ | intronic |
CAediting_423715 | chr5_119324258_+ | intronic |
CAediting_423716 | chr5_119324972_+ | intronic |
CAediting_423717 | chr5_119324978_+ | intronic |
CAediting_423718 | chr5_119324979_+ | intronic |
CAediting_423719 | chr5_119325052_+ | intronic |
CAediting_423720 | chr5_119325448_+ | intronic |
CAediting_423721 | chr5_119325467_+ | intronic |
CAediting_423722 | chr5_119325528_+ | intronic |
CAediting_423723 | chr5_119325577_+ | intronic |
CAediting_423724 | chr5_119325587_+ | intronic |
CAediting_423725 | chr5_119325589_+ | intronic |
CAediting_423726 | chr5_119325630_+ | intronic |
CAediting_423727 | chr5_119325647_+ | intronic |
CAediting_423728 | chr5_119325650_+ | intronic |
CAediting_423729 | chr5_119325655_+ | intronic |
CAediting_423730 | chr5_119325722_+ | intronic |
CAediting_423731 | chr5_119348617_+ | intronic |
CAediting_423732 | chr5_119348625_+ | intronic |
CAediting_423733 | chr5_119348626_+ | intronic |
CAediting_423734 | chr5_119348631_+ | intronic |
CAediting_423735 | chr5_119348671_+ | intronic |
CAediting_423736 | chr5_119348679_+ | intronic |
CAediting_423737 | chr5_119348680_+ | intronic |
CAediting_423738 | chr5_119348733_+ | intronic |
CAediting_423739 | chr5_119348737_+ | intronic |
CAediting_423740 | chr5_119348749_+ | intronic |
CAediting_423741 | chr5_119348759_+ | intronic |
CAediting_423742 | chr5_119348765_+ | intronic |
CAediting_423743 | chr5_119348786_+ | intronic |
CAediting_423744 | chr5_119348837_+ | intronic |
CAediting_423745 | chr5_119348855_+ | intronic |
CAediting_423746 | chr5_119348864_+ | intronic |
CAediting_423747 | chr5_119351148_+ | intronic |
CAediting_423748 | chr5_119351149_+ | intronic |
CAediting_423749 | chr5_119351156_+ | intronic |
CAediting_423750 | chr5_119351237_+ | intronic |
CAediting_423751 | chr5_119351248_+ | intronic |
CAediting_423752 | chr5_119351262_+ | intronic |
CAediting_423753 | chr5_119362522_+ | intronic |
CAediting_423754 | chr5_119362524_+ | intronic |
CAediting_423755 | chr5_119362540_+ | intronic |
CAediting_423756 | chr5_119362589_+ | intronic |
CAediting_423757 | chr5_119362595_+ | intronic |
CAediting_423758 | chr5_119362646_+ | intronic |
CAediting_423759 | chr5_119362647_+ | intronic |
CAediting_423760 | chr5_119362665_+ | intronic |
CAediting_423761 | chr5_119364474_+ | intronic |
CAediting_423762 | chr5_119364519_+ | intronic |
CAediting_423763 | chr5_119364538_+ | intronic |
CAediting_423764 | chr5_119364545_+ | intronic |
CAediting_423765 | chr5_119371771_+ | intronic |
CAediting_423766 | chr5_119376373_+ | intronic |
CAediting_423767 | chr5_119377220_+ | intronic |
CAediting_423768 | chr5_119378944_+ | intronic |
CAediting_423769 | chr5_119379007_+ | intronic |
CAediting_423770 | chr5_119379717_+ | intronic |
CAediting_423771 | chr5_119379720_+ | intronic |
CAediting_423772 | chr5_119390912_+ | intronic |
CAediting_423773 | chr5_119391680_+ | intronic |
CAediting_423774 | chr5_119392586_+ | intronic |
CAediting_423775 | chr5_119394655_+ | UTR3 |
CAediting_423776 | chr5_119394657_+ | UTR3 |
CAediting_423777 | chr5_119394658_+ | UTR3 |
CAediting_423778 | chr5_119394681_+ | UTR3 |
CAediting_423779 | chr5_119394686_+ | UTR3 |
CAediting_423780 | chr5_119394687_+ | UTR3 |
CAediting_423781 | chr5_119394706_+ | UTR3 |
CAediting_423782 | chr5_119394746_+ | UTR3 |
CAediting_423783 | chr5_119394781_+ | UTR3 |
CAediting_423784 | chr5_119394787_+ | UTR3 |
CAediting_423785 | chr5_119394804_+ | UTR3 |
CAediting_423786 | chr5_119394816_+ | UTR3 |
CAediting_423787 | chr5_119394829_+ | UTR3 |
CAediting_423788 | chr5_119394841_+ | UTR3 |
CAediting_423789 | chr5_119394842_+ | UTR3 |
CAediting_423790 | chr5_119394843_+ | UTR3 |
CAediting_423791 | chr5_119394868_+ | UTR3 |
CAediting_423792 | chr5_119394869_+ | UTR3 |
CAediting_423793 | chr5_119396737_+ | UTR3 |
CAediting_423794 | chr5_119396738_+ | UTR3 |
CAediting_423795 | chr5_119396743_+ | UTR3 |
CAediting_423796 | chr5_119396773_+ | UTR3 |
CAediting_423797 | chr5_119396778_+ | UTR3 |
CAediting_423798 | chr5_119396783_+ | UTR3 |
CAediting_423799 | chr5_119396786_+ | UTR3 |
CAediting_423800 | chr5_119396792_+ | UTR3 |
CAediting_423801 | chr5_119396794_+ | UTR3 |
CAediting_423802 | chr5_119396797_+ | UTR3 |
CAediting_423803 | chr5_119396806_+ | UTR3 |
CAediting_423804 | chr5_119396807_+ | UTR3 |
CAediting_423805 | chr5_119396816_+ | UTR3 |
CAediting_423806 | chr5_119396817_+ | UTR3 |
CAediting_423807 | chr5_119396828_+ | UTR3 |
CAediting_423808 | chr5_119396832_+ | UTR3 |
CAediting_423809 | chr5_119396833_+ | UTR3 |
CAediting_423810 | chr5_119396834_+ | UTR3 |
CAediting_423811 | chr5_119396835_+ | UTR3 |
CAediting_423812 | chr5_119396837_+ | UTR3 |
CAediting_423813 | chr5_119396842_+ | UTR3 |
CAediting_423814 | chr5_119396851_+ | UTR3 |
CAediting_423815 | chr5_119396853_+ | UTR3 |
CAediting_423816 | chr5_119396863_+ | UTR3 |
CAediting_423817 | chr5_119396873_+ | UTR3 |
CAediting_423818 | chr5_119396874_+ | UTR3 |
CAediting_423819 | chr5_119396879_+ | UTR3 |
CAediting_423820 | chr5_119396883_+ | UTR3 |
CAediting_423821 | chr5_119396890_+ | UTR3 |
CAediting_423822 | chr5_119396895_+ | UTR3 |
CAediting_423823 | chr5_119396896_+ | UTR3 |
CAediting_423824 | chr5_119396900_+ | UTR3 |
CAediting_423825 | chr5_119396903_+ | UTR3 |
CAediting_423826 | chr5_119396905_+ | UTR3 |
CAediting_423827 | chr5_119396906_+ | UTR3 |
CAediting_423828 | chr5_119396914_+ | UTR3 |
CAediting_423829 | chr5_119396915_+ | UTR3 |
CAediting_423830 | chr5_119396922_+ | UTR3 |
CAediting_423831 | chr5_119396926_+ | UTR3 |
CAediting_423832 | chr5_119396928_+ | UTR3 |
CAediting_423833 | chr5_119396935_+ | UTR3 |
CAediting_423834 | chr5_119396939_+ | UTR3 |
CAediting_423835 | chr5_119396946_+ | UTR3 |
CAediting_423836 | chr5_119396951_+ | UTR3 |
CAediting_423837 | chr5_119396954_+ | UTR3 |
CAediting_423838 | chr5_119396964_+ | UTR3 |
CAediting_423839 | chr5_119396997_+ | UTR3 |
CAediting_423840 | chr5_119396998_+ | UTR3 |
CAediting_423841 | chr5_119398425_+ | UTR3 |
CAediting_423842 | chr5_119398426_+ | UTR3 |
CAediting_423843 | chr5_119398432_+ | UTR3 |
CAediting_423844 | chr5_119398466_+ | UTR3 |
CAediting_423845 | chr5_119398472_+ | UTR3 |
CAediting_423846 | chr5_119398480_+ | UTR3 |
CAediting_423847 | chr5_119398482_+ | UTR3 |
CAediting_423848 | chr5_119398495_+ | UTR3 |
CAediting_423849 | chr5_119398505_+ | UTR3 |
CAediting_423850 | chr5_119398519_+ | UTR3 |
CAediting_423851 | chr5_119398520_+ | UTR3 |
CAediting_423852 | chr5_119398521_+ | UTR3 |
CAediting_423853 | chr5_119398522_+ | UTR3 |
CAediting_423854 | chr5_119398525_+ | UTR3 |
CAediting_423855 | chr5_119398528_+ | UTR3 |
CAediting_423856 | chr5_119398543_+ | UTR3 |
CAediting_423857 | chr5_119398559_+ | UTR3 |
CAediting_423858 | chr5_119398560_+ | UTR3 |
CAediting_423859 | chr5_119398586_+ | UTR3 |
CAediting_423860 | chr5_119398592_+ | UTR3 |
CAediting_423861 | chr5_119398595_+ | UTR3 |
CAediting_423862 | chr5_119398600_+ | UTR3 |
CAediting_423863 | chr5_119398601_+ | UTR3 |
CAediting_423864 | chr5_119398605_+ | UTR3 |
CAediting_423865 | chr5_119398612_+ | UTR3 |
CAediting_423866 | chr5_119398614_+ | UTR3 |
CAediting_423867 | chr5_119398630_+ | UTR3 |
CAediting_423868 | chr5_119398637_+ | UTR3 |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_423610 | chr5_119279594_+ | SINE | Alu | FAM |
CAediting_423611 | chr5_119279651_+ | SINE | Alu | FAM |
CAediting_423612 | chr5_119283376_+ | SINE | Alu | FLAM_A |
CAediting_423613 | chr5_119283377_+ | SINE | Alu | FLAM_A |
CAediting_423614 | chr5_119286572_+ | SINE | Alu | AluY |
CAediting_423615 | chr5_119304219_+ | SINE | Alu | AluJo |
CAediting_423616 | chr5_119308610_+ | SINE | Alu | AluSg4 |
CAediting_423617 | chr5_119308611_+ | SINE | Alu | AluSg4 |
CAediting_423618 | chr5_119308640_+ | SINE | Alu | AluSg4 |
CAediting_423619 | chr5_119308741_+ | SINE | Alu | AluSg4 |
CAediting_423620 | chr5_119308742_+ | SINE | Alu | AluSg4 |
CAediting_423621 | chr5_119308804_+ | SINE | Alu | AluSg4 |
CAediting_423622 | chr5_119310557_+ | SINE | Alu | AluSz |
CAediting_423623 | chr5_119310573_+ | SINE | Alu | AluSz |
CAediting_423624 | chr5_119310707_+ | SINE | Alu | AluSz |
CAediting_423625 | chr5_119310712_+ | SINE | Alu | AluSz |
CAediting_423626 | chr5_119310729_+ | SINE | Alu | AluSz |
CAediting_423627 | chr5_119310747_+ | SINE | Alu | AluSz |
CAediting_423628 | chr5_119310766_+ | SINE | Alu | AluSz |
CAediting_423629 | chr5_119311047_+ | SINE | Alu | AluJr |
CAediting_423630 | chr5_119311084_+ | SINE | Alu | AluJr |
CAediting_423631 | chr5_119311090_+ | SINE | Alu | AluJr |
CAediting_423632 | chr5_119311102_+ | SINE | Alu | AluJr |
CAediting_423633 | chr5_119311109_+ | SINE | Alu | AluJr |
CAediting_423634 | chr5_119311127_+ | SINE | Alu | AluJr |
CAediting_423635 | chr5_119311135_+ | SINE | Alu | AluJr |
CAediting_423636 | chr5_119311140_+ | SINE | Alu | AluJr |
CAediting_423637 | chr5_119311147_+ | SINE | Alu | AluJr |
CAediting_423638 | chr5_119311152_+ | SINE | Alu | AluJr |
CAediting_423639 | chr5_119311168_+ | SINE | Alu | AluJr |
CAediting_423640 | chr5_119311189_+ | SINE | Alu | AluJr |
CAediting_423641 | chr5_119311227_+ | SINE | Alu | AluJr |
CAediting_423642 | chr5_119311234_+ | SINE | Alu | AluJr |
CAediting_423643 | chr5_119311286_+ | SINE | Alu | AluJr |
CAediting_423644 | chr5_119311430_+ | SINE | Alu | AluSc8 |
CAediting_423645 | chr5_119311436_+ | SINE | Alu | AluSc8 |
CAediting_423646 | chr5_119311442_+ | SINE | Alu | AluSc8 |
CAediting_423647 | chr5_119311539_+ | SINE | Alu | AluSc8 |
CAediting_423648 | chr5_119311540_+ | SINE | Alu | AluSc8 |
CAediting_423649 | chr5_119311541_+ | SINE | Alu | AluSc8 |
CAediting_423650 | chr5_119311544_+ | SINE | Alu | AluSc8 |
CAediting_423651 | chr5_119311545_+ | SINE | Alu | AluSc8 |
CAediting_423652 | chr5_119311574_+ | SINE | Alu | AluSc8 |
CAediting_423653 | chr5_119311591_+ | SINE | Alu | AluSc8 |
CAediting_423654 | chr5_119311595_+ | SINE | Alu | AluSc8 |
CAediting_423655 | chr5_119311604_+ | SINE | Alu | AluSc8 |
CAediting_423656 | chr5_119311610_+ | SINE | Alu | AluSc8 |
CAediting_423657 | chr5_119311614_+ | SINE | Alu | AluSc8 |
CAediting_423658 | chr5_119311617_+ | SINE | Alu | AluSc8 |
CAediting_423659 | chr5_119311638_+ | SINE | Alu | AluSc8 |
CAediting_423660 | chr5_119311639_+ | SINE | Alu | AluSc8 |
CAediting_423661 | chr5_119311671_+ | SINE | Alu | AluSc8 |
CAediting_423662 | chr5_119312652_+ | SINE | Alu | AluJb |
CAediting_423663 | chr5_119312665_+ | SINE | Alu | AluJb |
CAediting_423664 | chr5_119312666_+ | SINE | Alu | AluJb |
CAediting_423665 | chr5_119314105_+ | SINE | Alu | FLAM_A |
CAediting_423666 | chr5_119314143_+ | SINE | Alu | FLAM_A |
CAediting_423667 | chr5_119315258_+ | SINE | Alu | AluSx1 |
CAediting_423668 | chr5_119316234_+ | SINE | Alu | AluJr |
CAediting_423669 | chr5_119316239_+ | SINE | Alu | AluJr |
CAediting_423670 | chr5_119316247_+ | SINE | Alu | AluJr |
CAediting_423671 | chr5_119316272_+ | SINE | Alu | AluJr |
CAediting_423672 | chr5_119316394_+ | SINE | Alu | AluJr |
CAediting_423673 | chr5_119316427_+ | SINE | Alu | AluJr |
CAediting_423674 | chr5_119317692_+ | SINE | Alu | AluSz |
CAediting_423675 | chr5_119317700_+ | SINE | Alu | AluSz |
CAediting_423676 | chr5_119317738_+ | SINE | Alu | AluSz |
CAediting_423677 | chr5_119317740_+ | SINE | Alu | AluSz |
CAediting_423678 | chr5_119318321_+ | SINE | Alu | AluJb |
CAediting_423679 | chr5_119318347_+ | SINE | Alu | AluJb |
CAediting_423680 | chr5_119318531_+ | SINE | Alu | AluJb |
CAediting_423681 | chr5_119318536_+ | SINE | Alu | AluJb |
CAediting_423682 | chr5_119319147_+ | SINE | Alu | AluJr |
CAediting_423683 | chr5_119319153_+ | SINE | Alu | AluJr |
CAediting_423684 | chr5_119319154_+ | SINE | Alu | AluJr |
CAediting_423685 | chr5_119319170_+ | SINE | Alu | AluJr |
CAediting_423686 | chr5_119319176_+ | SINE | Alu | AluJr |
CAediting_423687 | chr5_119319189_+ | SINE | Alu | AluJr |
CAediting_423688 | chr5_119319195_+ | SINE | Alu | AluJr |
CAediting_423689 | chr5_119319199_+ | SINE | Alu | AluJr |
CAediting_423690 | chr5_119319219_+ | SINE | Alu | AluJr |
CAediting_423691 | chr5_119319231_+ | SINE | Alu | AluJr |
CAediting_423692 | chr5_119320961_+ | SINE | Alu | AluY |
CAediting_423693 | chr5_119320962_+ | SINE | Alu | AluY |
CAediting_423694 | chr5_119324104_+ | SINE | Alu | AluSx1 |
CAediting_423695 | chr5_119324110_+ | SINE | Alu | AluSx1 |
CAediting_423696 | chr5_119324113_+ | SINE | Alu | AluSx1 |
CAediting_423697 | chr5_119324114_+ | SINE | Alu | AluSx1 |
CAediting_423698 | chr5_119324128_+ | SINE | Alu | AluSx1 |
CAediting_423699 | chr5_119324132_+ | SINE | Alu | AluSx1 |
CAediting_423700 | chr5_119324154_+ | SINE | Alu | AluSx1 |
CAediting_423701 | chr5_119324155_+ | SINE | Alu | AluSx1 |
CAediting_423702 | chr5_119324160_+ | SINE | Alu | AluSx1 |
CAediting_423703 | chr5_119324177_+ | SINE | Alu | AluSx1 |
CAediting_423704 | chr5_119324181_+ | SINE | Alu | AluSx1 |
CAediting_423705 | chr5_119324185_+ | SINE | Alu | AluSx1 |
CAediting_423706 | chr5_119324187_+ | SINE | Alu | AluSx1 |
CAediting_423707 | chr5_119324190_+ | SINE | Alu | AluSx1 |
CAediting_423708 | chr5_119324196_+ | SINE | Alu | AluSx1 |
CAediting_423709 | chr5_119324200_+ | SINE | Alu | AluSx1 |
CAediting_423710 | chr5_119324203_+ | SINE | Alu | AluSx1 |
CAediting_423711 | chr5_119324216_+ | SINE | Alu | AluSx1 |
CAediting_423712 | chr5_119324220_+ | SINE | Alu | AluSx1 |
CAediting_423713 | chr5_119324225_+ | SINE | Alu | AluSx1 |
CAediting_423714 | chr5_119324245_+ | SINE | Alu | AluSx1 |
CAediting_423715 | chr5_119324258_+ | SINE | Alu | AluSx1 |
CAediting_423716 | chr5_119324972_+ | SINE | Alu | AluJr |
CAediting_423717 | chr5_119324978_+ | SINE | Alu | AluJr |
CAediting_423718 | chr5_119324979_+ | SINE | Alu | AluJr |
CAediting_423719 | chr5_119325052_+ | SINE | Alu | AluJr |
CAediting_423720 | chr5_119325448_+ | SINE | Alu | AluY |
CAediting_423721 | chr5_119325467_+ | SINE | Alu | AluY |
CAediting_423722 | chr5_119325528_+ | SINE | Alu | AluY |
CAediting_423723 | chr5_119325577_+ | SINE | Alu | AluY |
CAediting_423724 | chr5_119325587_+ | SINE | Alu | AluY |
CAediting_423725 | chr5_119325589_+ | SINE | Alu | AluY |
CAediting_423726 | chr5_119325630_+ | SINE | Alu | AluY |
CAediting_423727 | chr5_119325647_+ | SINE | Alu | AluY |
CAediting_423728 | chr5_119325650_+ | SINE | Alu | AluY |
CAediting_423729 | chr5_119325655_+ | SINE | Alu | AluY |
CAediting_423730 | chr5_119325722_+ | SINE | Alu | AluY |
CAediting_423731 | chr5_119348617_+ | SINE | Alu | AluSq |
CAediting_423732 | chr5_119348625_+ | SINE | Alu | AluSq |
CAediting_423733 | chr5_119348626_+ | SINE | Alu | AluSq |
CAediting_423734 | chr5_119348631_+ | SINE | Alu | AluSq |
CAediting_423735 | chr5_119348671_+ | SINE | Alu | AluSq |
CAediting_423736 | chr5_119348679_+ | SINE | Alu | AluSq |
CAediting_423737 | chr5_119348680_+ | SINE | Alu | AluSq |
CAediting_423738 | chr5_119348733_+ | SINE | Alu | AluSq |
CAediting_423739 | chr5_119348737_+ | SINE | Alu | AluSq |
CAediting_423740 | chr5_119348749_+ | SINE | Alu | AluSq |
CAediting_423741 | chr5_119348759_+ | SINE | Alu | AluSq |
CAediting_423742 | chr5_119348765_+ | SINE | Alu | AluSq |
CAediting_423743 | chr5_119348786_+ | SINE | Alu | AluSq |
CAediting_423744 | chr5_119348837_+ | SINE | Alu | AluSq |
CAediting_423745 | chr5_119348855_+ | SINE | Alu | AluSq |
CAediting_423746 | chr5_119348864_+ | SINE | Alu | AluSq |
CAediting_423747 | chr5_119351148_+ | SINE | Alu | AluJr4 |
CAediting_423748 | chr5_119351149_+ | SINE | Alu | AluJr4 |
CAediting_423749 | chr5_119351156_+ | SINE | Alu | AluJr4 |
CAediting_423750 | chr5_119351237_+ | SINE | Alu | AluJr4 |
CAediting_423751 | chr5_119351248_+ | SINE | Alu | AluJr4 |
CAediting_423752 | chr5_119351262_+ | SINE | Alu | AluJr4 |
CAediting_423753 | chr5_119362522_+ | SINE | Alu | AluJo |
CAediting_423754 | chr5_119362524_+ | SINE | Alu | AluJo |
CAediting_423755 | chr5_119362540_+ | SINE | Alu | AluJo |
CAediting_423756 | chr5_119362589_+ | SINE | Alu | AluJo |
CAediting_423757 | chr5_119362595_+ | SINE | Alu | AluJo |
CAediting_423758 | chr5_119362646_+ | SINE | Alu | AluJo |
CAediting_423759 | chr5_119362647_+ | SINE | Alu | AluJo |
CAediting_423760 | chr5_119362665_+ | SINE | Alu | AluJo |
CAediting_423761 | chr5_119364474_+ | SINE | Alu | AluJo |
CAediting_423762 | chr5_119364519_+ | SINE | Alu | AluJo |
CAediting_423763 | chr5_119364538_+ | SINE | Alu | AluJo |
CAediting_423764 | chr5_119364545_+ | SINE | Alu | AluJo |
CAediting_423765 | chr5_119371771_+ | SINE | Alu | AluJb |
CAediting_423766 | chr5_119376373_+ | SINE | Alu | AluSx |
CAediting_423767 | chr5_119377220_+ | SINE | Alu | AluJr |
CAediting_423768 | chr5_119378944_+ | SINE | Alu | AluJr4 |
CAediting_423769 | chr5_119379007_+ | SINE | Alu | AluJr4 |
CAediting_423770 | chr5_119379717_+ | SINE | Alu | AluSx |
CAediting_423771 | chr5_119379720_+ | SINE | Alu | AluSx |
CAediting_423772 | chr5_119390912_+ | SINE | Alu | AluJb |
CAediting_423773 | chr5_119391680_+ | SINE | Alu | AluSq2 |
CAediting_423774 | chr5_119392586_+ | SINE | Alu | AluSx1 |
CAediting_423775 | chr5_119394655_+ | SINE | Alu | AluSz |
CAediting_423776 | chr5_119394657_+ | SINE | Alu | AluSz |
CAediting_423777 | chr5_119394658_+ | SINE | Alu | AluSz |
CAediting_423778 | chr5_119394681_+ | SINE | Alu | AluSz |
CAediting_423779 | chr5_119394686_+ | SINE | Alu | AluSz |
CAediting_423780 | chr5_119394687_+ | SINE | Alu | AluSz |
CAediting_423781 | chr5_119394706_+ | SINE | Alu | AluSz |
CAediting_423782 | chr5_119394746_+ | SINE | Alu | AluSz |
CAediting_423783 | chr5_119394781_+ | SINE | Alu | AluSz |
CAediting_423784 | chr5_119394787_+ | SINE | Alu | AluSz |
CAediting_423785 | chr5_119394804_+ | SINE | Alu | AluSz |
CAediting_423786 | chr5_119394816_+ | SINE | Alu | AluSz |
CAediting_423787 | chr5_119394829_+ | SINE | Alu | AluSz |
CAediting_423788 | chr5_119394841_+ | SINE | Alu | AluSz |
CAediting_423789 | chr5_119394842_+ | SINE | Alu | AluSz |
CAediting_423790 | chr5_119394843_+ | SINE | Alu | AluSz |
CAediting_423791 | chr5_119394868_+ | SINE | Alu | AluSz |
CAediting_423792 | chr5_119394869_+ | SINE | Alu | AluSz |
CAediting_423793 | chr5_119396737_+ | SINE | Alu | AluSq |
CAediting_423794 | chr5_119396738_+ | SINE | Alu | AluSq |
CAediting_423795 | chr5_119396743_+ | SINE | Alu | AluSq |
CAediting_423796 | chr5_119396773_+ | SINE | Alu | AluSq |
CAediting_423797 | chr5_119396778_+ | SINE | Alu | AluSq |
CAediting_423798 | chr5_119396783_+ | SINE | Alu | AluSq |
CAediting_423799 | chr5_119396786_+ | SINE | Alu | AluSq |
CAediting_423800 | chr5_119396792_+ | SINE | Alu | AluSq |
CAediting_423801 | chr5_119396794_+ | SINE | Alu | AluSq |
CAediting_423802 | chr5_119396797_+ | SINE | Alu | AluSq |
CAediting_423803 | chr5_119396806_+ | SINE | Alu | AluSq |
CAediting_423804 | chr5_119396807_+ | SINE | Alu | AluSq |
CAediting_423805 | chr5_119396816_+ | SINE | Alu | AluSq |
CAediting_423806 | chr5_119396817_+ | SINE | Alu | AluSq |
CAediting_423807 | chr5_119396828_+ | SINE | Alu | AluSq |
CAediting_423808 | chr5_119396832_+ | SINE | Alu | AluSq |
CAediting_423809 | chr5_119396833_+ | SINE | Alu | AluSq |
CAediting_423810 | chr5_119396834_+ | SINE | Alu | AluSq |
CAediting_423811 | chr5_119396835_+ | SINE | Alu | AluSq |
CAediting_423812 | chr5_119396837_+ | SINE | Alu | AluSq |
CAediting_423813 | chr5_119396842_+ | SINE | Alu | AluSq |
CAediting_423814 | chr5_119396851_+ | SINE | Alu | AluSq |
CAediting_423815 | chr5_119396853_+ | SINE | Alu | AluSq |
CAediting_423816 | chr5_119396863_+ | SINE | Alu | AluSq |
CAediting_423817 | chr5_119396873_+ | SINE | Alu | AluSq |
CAediting_423818 | chr5_119396874_+ | SINE | Alu | AluSq |
CAediting_423819 | chr5_119396879_+ | SINE | Alu | AluSq |
CAediting_423820 | chr5_119396883_+ | SINE | Alu | AluSq |
CAediting_423821 | chr5_119396890_+ | SINE | Alu | AluSq |
CAediting_423822 | chr5_119396895_+ | SINE | Alu | AluSq |
CAediting_423823 | chr5_119396896_+ | SINE | Alu | AluSq |
CAediting_423824 | chr5_119396900_+ | SINE | Alu | AluSq |
CAediting_423825 | chr5_119396903_+ | SINE | Alu | AluSq |
CAediting_423826 | chr5_119396905_+ | SINE | Alu | AluSq |
CAediting_423827 | chr5_119396906_+ | SINE | Alu | AluSq |
CAediting_423828 | chr5_119396914_+ | SINE | Alu | AluSq |
CAediting_423829 | chr5_119396915_+ | SINE | Alu | AluSq |
CAediting_423830 | chr5_119396922_+ | SINE | Alu | AluSq |
CAediting_423831 | chr5_119396926_+ | SINE | Alu | AluSq |
CAediting_423832 | chr5_119396928_+ | SINE | Alu | AluSq |
CAediting_423833 | chr5_119396935_+ | SINE | Alu | AluSq |
CAediting_423834 | chr5_119396939_+ | SINE | Alu | AluSq |
CAediting_423835 | chr5_119396946_+ | SINE | Alu | AluSq |
CAediting_423836 | chr5_119396951_+ | SINE | Alu | AluSq |
CAediting_423837 | chr5_119396954_+ | SINE | Alu | AluSq |
CAediting_423838 | chr5_119396964_+ | SINE | Alu | AluSq |
CAediting_423839 | chr5_119396997_+ | SINE | Alu | AluSq |
CAediting_423840 | chr5_119396998_+ | SINE | Alu | AluSq |
CAediting_423841 | chr5_119398425_+ | SINE | Alu | AluSq |
CAediting_423842 | chr5_119398426_+ | SINE | Alu | AluSq |
CAediting_423843 | chr5_119398432_+ | SINE | Alu | AluSq |
CAediting_423844 | chr5_119398466_+ | SINE | Alu | AluSq |
CAediting_423845 | chr5_119398472_+ | SINE | Alu | AluSq |
CAediting_423846 | chr5_119398480_+ | SINE | Alu | AluSq |
CAediting_423847 | chr5_119398482_+ | SINE | Alu | AluSq |
CAediting_423848 | chr5_119398495_+ | SINE | Alu | AluSq |
CAediting_423849 | chr5_119398505_+ | SINE | Alu | AluSq |
CAediting_423850 | chr5_119398519_+ | SINE | Alu | AluSq |
CAediting_423851 | chr5_119398520_+ | SINE | Alu | AluSq |
CAediting_423852 | chr5_119398521_+ | SINE | Alu | AluSq |
CAediting_423853 | chr5_119398522_+ | SINE | Alu | AluSq |
CAediting_423854 | chr5_119398525_+ | SINE | Alu | AluSq |
CAediting_423855 | chr5_119398528_+ | SINE | Alu | AluSq |
CAediting_423856 | chr5_119398543_+ | SINE | Alu | AluSq |
CAediting_423857 | chr5_119398559_+ | SINE | Alu | AluSq |
CAediting_423858 | chr5_119398560_+ | SINE | Alu | AluSq |
CAediting_423859 | chr5_119398586_+ | SINE | Alu | AluSq |
CAediting_423860 | chr5_119398592_+ | SINE | Alu | AluSq |
CAediting_423861 | chr5_119398595_+ | SINE | Alu | AluSq |
CAediting_423862 | chr5_119398600_+ | SINE | Alu | AluSq |
CAediting_423863 | chr5_119398601_+ | SINE | Alu | AluSq |
CAediting_423864 | chr5_119398605_+ | SINE | Alu | AluSq |
CAediting_423865 | chr5_119398612_+ | SINE | Alu | AluSq |
CAediting_423866 | chr5_119398614_+ | SINE | Alu | AluSq |
CAediting_423867 | chr5_119398630_+ | SINE | Alu | AluSq |
CAediting_423868 | chr5_119398637_+ | SINE | Alu | AluSq |
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RNA A-to-I editing events in the alternative splicing sites for TNFAIP8 |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
IR | CAediting_423781 | chr5_119394706_+ | 119394699:119394707 | 5SS | 0+5i | CAGGTTCAA | 1.19 | CAGGTTCGA | 5.36 |
IR | CAediting_423820 | chr5_119396883_+ | 119396881:119396903 | 3SS | 0+18i | CTACTTGGGAGGCTAAGGCAGGA | -46.66 | CTGCTTGGGAGGCTAAGGCAGGA | -46.48 |
IR | CAediting_423821 | chr5_119396890_+ | 119396881:119396903 | 3SS | 0+11i | CTACTTGGGAGGCTAAGGCAGGA | -46.66 | CTACTTGGGGGGCTAAGGCAGGA | -41.15 |
IR | CAediting_423822 | chr5_119396895_+ | 119396881:119396903 | 3SS | 0+6i | CTACTTGGGAGGCTAAGGCAGGA | -46.66 | CTACTTGGGAGGCTGAGGCAGGA | -42.97 |
IR | CAediting_423823 | chr5_119396896_+ | 119396881:119396903 | 3SS | 0+5i | CTACTTGGGAGGCTAAGGCAGGA | -46.66 | CTACTTGGGAGGCTAGGGCAGGA | -44.68 |
IR | CAediting_423824 | chr5_119396900_+ | 119396881:119396903 | 3SS | 0+1i | CTACTTGGGAGGCTAAGGCAGGA | -46.66 | CTACTTGGGAGGCTAAGGCGGGA | -37.91 |
IR | CAediting_423825 | chr5_119396903_+ | 119396881:119396903 | 3SS | 3+0i | CTACTTGGGAGGCTAAGGCAGGA | -46.66 | CTACTTGGGAGGCTAAGGCAGGG | -45.03 |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000145779.7.TNFAIP8. |
Correlation between RNA A-to-I editing and PSI for ENSG00000145779.7.TNFAIP8. |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TNFAIP8 |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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Protein coding region RNA A-to-I editings for TNFAIP8 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for TNFAIP8 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_423786 | chr5_119394816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3940-3p | 119394813 | 119394819 | 7mer-m8 | 119394799 | 119394820 | 142.00 | -21.15 |
CAediting_423786 | chr5_119394816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-7112-5p | 119394810 | 119394815 | 6mer | 119394795 | 119394816 | 140.00 | -24.40 |
CAediting_423800 | chr5_119396792_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4281 | 119396789 | 119396796 | 8mer-1a | 119396779 | 119396796 | 142.00 | -18.84 |
CAediting_423804 | chr5_119396807_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3190-5p | 119396800 | 119396806 | 7mer-m8 | 119396788 | 119396807 | 154.00 | -19.64 |
CAediting_423806 | chr5_119396817_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-412-3p | 119396810 | 119396816 | 7mer-m8 | 119396795 | 119396817 | 153.00 | -17.30 |
CAediting_423806 | chr5_119396817_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6754-3p | 119396810 | 119396816 | 7mer-m8 | 119396797 | 119396817 | 150.00 | -16.33 |
CAediting_423808 | chr5_119396832_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-325 | 119396825 | 119396832 | 8mer-1a | 119396810 | 119396832 | 145.00 | -12.12 |
CAediting_423809 | chr5_119396833_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-630 | 119396831 | 119396838 | 8mer-1a | 119396815 | 119396838 | 156.00 | -16.94 |
CAediting_423812 | chr5_119396837_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-153-5p | 119396830 | 119396836 | 7mer-m8 | 119396815 | 119396837 | 148.00 | -11.83 |
CAediting_423823 | chr5_119396896_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-18a-3p | 119396894 | 119396900 | 7mer-m8 | 119396881 | 119396901 | 154.00 | -24.00 |
CAediting_423823 | chr5_119396896_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3157-3p | 119396893 | 119396899 | 7mer-m8 | 119396881 | 119396900 | 161.00 | -28.19 |
CAediting_423823 | chr5_119396896_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-874-3p | 119396894 | 119396899 | 6mer | 119396877 | 119396900 | 143.00 | -28.73 |
CAediting_423827 | chr5_119396906_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4431 | 119396902 | 119396908 | 7mer-m8 | 119396888 | 119396909 | 140.00 | -17.28 |
CAediting_423828 | chr5_119396914_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-7977 | 119396908 | 119396914 | 7mer-m8 | 119396898 | 119396915 | 142.00 | -14.22 |
CAediting_423828 | chr5_119396914_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-9900 | 119396912 | 119396918 | 7mer-m8 | 119396900 | 119396919 | 151.00 | -18.93 |
CAediting_423829 | chr5_119396915_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3155a | 119396912 | 119396918 | 7mer-m8 | 119396901 | 119396919 | 149.00 | -25.99 |
CAediting_423829 | chr5_119396915_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3155b | 119396912 | 119396918 | 7mer-m8 | 119396904 | 119396919 | 149.00 | -25.09 |
CAediting_423829 | chr5_119396915_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-484 | 119396912 | 119396918 | 7mer-m8 | 119396893 | 119396919 | 149.00 | -22.84 |
CAediting_423829 | chr5_119396915_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-766-3p | 119396908 | 119396914 | 7mer-m8 | 119396891 | 119396915 | 143.00 | -21.31 |
CAediting_423836 | chr5_119396951_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-891a-3p | 119396948 | 119396954 | 7mer-m8 | 119396933 | 119396955 | 152.00 | -20.03 |
CAediting_423846 | chr5_119398480_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1200 | 119398476 | 119398481 | 6mer | 119398464 | 119398482 | 140.00 | -22.62 |
CAediting_423846 | chr5_119398480_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-12113 | 119398473 | 119398479 | 7mer-m8 | 119398459 | 119398480 | 150.00 | -21.22 |
CAediting_423846 | chr5_119398480_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4539 | 119398473 | 119398479 | 7mer-m8 | 119398456 | 119398480 | 154.00 | -20.11 |
CAediting_423775 | chr5_119394655_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6512-3p | 119394650 | 119394657 | 8mer-1a | 119394636 | 119394657 | 146.00 | -19.47 |
CAediting_423775 | chr5_119394655_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6720-5p | 119394650 | 119394657 | 8mer-1a | 119394635 | 119394657 | 143.00 | -23.26 |
CAediting_423775 | chr5_119394655_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6849-3p | 119394649 | 119394656 | 8mer-1a | 119394636 | 119394656 | 142.00 | -16.65 |
CAediting_423776 | chr5_119394657_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4793-5p | 119394654 | 119394659 | 6mer | 119394637 | 119394660 | 150.00 | -22.20 |
CAediting_423777 | chr5_119394658_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1251-5p | 119394651 | 119394657 | 7mer-m8 | 119394634 | 119394658 | 148.00 | -21.30 |
CAediting_423777 | chr5_119394658_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4793-3p | 119394656 | 119394662 | 7mer-m8 | 119394641 | 119394663 | 145.00 | -17.27 |
CAediting_423777 | chr5_119394658_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-7703 | 119394655 | 119394661 | 7mer-m8 | 119394640 | 119394662 | 166.00 | -27.72 |
CAediting_423780 | chr5_119394687_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-17-3p | 119394680 | 119394686 | 7mer-m8 | 119394667 | 119394687 | 153.00 | -17.56 |
CAediting_423780 | chr5_119394687_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-485-5p | 119394684 | 119394690 | 7mer-m8 | 119394671 | 119394691 | 153.00 | -19.66 |
CAediting_423780 | chr5_119394687_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6884-5p | 119394684 | 119394690 | 7mer-m8 | 119394668 | 119394691 | 146.00 | -21.96 |
CAediting_423787 | chr5_119394829_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-28-5p | 119394827 | 119394833 | 7mer-m8 | 119394814 | 119394834 | 159.00 | -22.83 |
CAediting_423787 | chr5_119394829_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3670 | 119394825 | 119394831 | 7mer-m8 | 119394809 | 119394832 | 154.00 | -16.86 |
CAediting_423787 | chr5_119394829_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3670 | 119394825 | 119394831 | 7mer-m8 | 119394809 | 119394832 | 154.00 | -16.86 |
CAediting_423787 | chr5_119394829_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3670 | 119394825 | 119394831 | 7mer-m8 | 119394809 | 119394832 | 154.00 | -16.86 |
CAediting_423787 | chr5_119394829_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3670 | 119394825 | 119394831 | 7mer-m8 | 119394809 | 119394832 | 154.00 | -16.86 |
CAediting_423787 | chr5_119394829_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-708-5p | 119394827 | 119394833 | 7mer-m8 | 119394813 | 119394834 | 158.00 | -23.93 |
CAediting_423788 | chr5_119394841_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1298-5p | 119394839 | 119394845 | 7mer-m8 | 119394826 | 119394846 | 148.00 | -17.03 |
CAediting_423793 | chr5_119396737_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4284 | 119396734 | 119396740 | 7mer-m8 | 119396724 | 119396741 | 145.00 | -18.05 |
CAediting_423793 | chr5_119396737_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4437 | 119396735 | 119396742 | 8mer-1a | 119396721 | 119396742 | 151.00 | -20.00 |
CAediting_423793 | chr5_119396737_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-513b-5p | 119396731 | 119396737 | 7mer-m8 | 119396717 | 119396738 | 155.00 | -18.02 |
CAediting_423797 | chr5_119396778_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6802-3p | 119396776 | 119396782 | 7mer-m8 | 119396762 | 119396783 | 140.00 | -20.16 |
CAediting_423801 | chr5_119396794_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3176 | 119396791 | 119396797 | 7mer-m8 | 119396780 | 119396798 | 160.00 | -25.03 |
CAediting_423801 | chr5_119396794_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3922-3p | 119396791 | 119396797 | 7mer-m8 | 119396778 | 119396798 | 157.00 | -24.84 |
CAediting_423801 | chr5_119396794_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6878-3p | 119396790 | 119396796 | 7mer-m8 | 119396777 | 119396797 | 153.00 | -24.70 |
CAediting_423805 | chr5_119396816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1229-3p | 119396810 | 119396816 | 7mer-m8 | 119396793 | 119396817 | 154.00 | -18.23 |
CAediting_423805 | chr5_119396816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511a-3p | 119396809 | 119396816 | 8mer-1a | 119396798 | 119396816 | 142.00 | -14.89 |
CAediting_423805 | chr5_119396816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511a-3p | 119396809 | 119396816 | 8mer-1a | 119396798 | 119396816 | 142.00 | -14.89 |
CAediting_423805 | chr5_119396816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511a-3p | 119396809 | 119396816 | 8mer-1a | 119396798 | 119396816 | 142.00 | -14.89 |
CAediting_423805 | chr5_119396816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511a-3p | 119396809 | 119396816 | 8mer-1a | 119396798 | 119396816 | 142.00 | -14.89 |
CAediting_423805 | chr5_119396816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511b-3p | 119396809 | 119396816 | 8mer-1a | 119396794 | 119396816 | 145.00 | -18.05 |
CAediting_423805 | chr5_119396816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511b-3p | 119396809 | 119396816 | 8mer-1a | 119396794 | 119396816 | 145.00 | -18.05 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-15a-5p | 119396823 | 119396830 | 8mer-1a | 119396811 | 119396830 | 143.00 | -16.21 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-15b-5p | 119396823 | 119396830 | 8mer-1a | 119396811 | 119396830 | 143.00 | -16.89 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-16-5p | 119396823 | 119396830 | 8mer-1a | 119396810 | 119396830 | 141.00 | -14.25 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-16-5p | 119396823 | 119396830 | 8mer-1a | 119396810 | 119396830 | 141.00 | -14.25 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-195-5p | 119396823 | 119396830 | 8mer-1a | 119396810 | 119396830 | 140.00 | -13.25 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-374b-3p | 119396825 | 119396832 | 8mer-1a | 119396807 | 119396832 | 150.00 | -14.03 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-424-5p | 119396823 | 119396830 | 8mer-1a | 119396810 | 119396830 | 146.00 | -12.17 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-497-5p | 119396823 | 119396830 | 8mer-1a | 119396812 | 119396830 | 156.00 | -15.74 |
CAediting_423807 | chr5_119396828_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6838-5p | 119396823 | 119396830 | 8mer-1a | 119396809 | 119396830 | 160.00 | -22.64 |
CAediting_423815 | chr5_119396853_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1228-3p | 119396850 | 119396856 | 7mer-m8 | 119396838 | 119396857 | 152.00 | -17.32 |
CAediting_423815 | chr5_119396853_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6765-3p | 119396848 | 119396854 | 7mer-m8 | 119396835 | 119396855 | 154.00 | -21.96 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4258 | 119396858 | 119396864 | 7mer-m8 | 119396849 | 119396865 | 159.00 | -24.98 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4707-3p | 119396859 | 119396866 | 8mer-1a | 119396844 | 119396866 | 147.00 | -23.92 |
CAediting_423817 | chr5_119396873_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-513a-5p | 119396867 | 119396873 | 7mer-m8 | 119396857 | 119396874 | 144.00 | -17.88 |
CAediting_423817 | chr5_119396873_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-513a-5p | 119396867 | 119396873 | 7mer-m8 | 119396857 | 119396874 | 144.00 | -17.88 |
CAediting_423817 | chr5_119396873_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-638 | 119396872 | 119396878 | 7mer-1a | 119396854 | 119396878 | 151.00 | -29.11 |
CAediting_423818 | chr5_119396874_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-8052 | 119396872 | 119396878 | 7mer-1a | 119396858 | 119396878 | 145.00 | -20.57 |
CAediting_423820 | chr5_119396883_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1207-3p | 119396876 | 119396882 | 7mer-m8 | 119396866 | 119396883 | 140.00 | -12.56 |
CAediting_423820 | chr5_119396883_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-646 | 119396878 | 119396884 | 7mer-m8 | 119396867 | 119396885 | 145.00 | -16.24 |
CAediting_423825 | chr5_119396903_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6752-3p | 119396896 | 119396902 | 7mer-m8 | 119396884 | 119396903 | 149.00 | -29.08 |
CAediting_423825 | chr5_119396903_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6801-3p | 119396897 | 119396904 | 8mer-1a | 119396885 | 119396904 | 145.00 | -22.65 |
CAediting_423825 | chr5_119396903_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6810-3p | 119396897 | 119396904 | 8mer-1a | 119396884 | 119396904 | 150.00 | -29.55 |
CAediting_423826 | chr5_119396905_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-660-3p | 119396898 | 119396905 | 8mer-1a | 119396885 | 119396905 | 143.00 | -15.80 |
CAediting_423830 | chr5_119396922_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1913 | 119396920 | 119396927 | 8mer-1a | 119396906 | 119396927 | 156.00 | -25.87 |
CAediting_423830 | chr5_119396922_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-361-3p | 119396916 | 119396922 | 7mer-m8 | 119396897 | 119396923 | 165.00 | -32.41 |
CAediting_423831 | chr5_119396926_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1281 | 119396919 | 119396925 | 7mer-m8 | 119396910 | 119396926 | 141.00 | -20.13 |
CAediting_423833 | chr5_119396935_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511a-3p | 119396934 | 119396939 | 6mer | 119396919 | 119396940 | 144.00 | -26.09 |
CAediting_423833 | chr5_119396935_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511a-3p | 119396934 | 119396939 | 6mer | 119396919 | 119396940 | 144.00 | -26.09 |
CAediting_423833 | chr5_119396935_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511a-3p | 119396934 | 119396939 | 6mer | 119396919 | 119396940 | 144.00 | -26.09 |
CAediting_423833 | chr5_119396935_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511a-3p | 119396934 | 119396939 | 6mer | 119396919 | 119396940 | 144.00 | -26.09 |
CAediting_423833 | chr5_119396935_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511b-3p | 119396934 | 119396939 | 6mer | 119396918 | 119396940 | 148.00 | -28.97 |
CAediting_423833 | chr5_119396935_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6511b-3p | 119396934 | 119396939 | 6mer | 119396918 | 119396940 | 148.00 | -28.97 |
CAediting_423833 | chr5_119396935_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6784-3p | 119396934 | 119396939 | 6mer | 119396918 | 119396940 | 151.00 | -31.20 |
CAediting_423834 | chr5_119396939_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-324-3p | 119396932 | 119396938 | 7mer-m8 | 119396917 | 119396939 | 149.00 | -24.32 |
CAediting_423834 | chr5_119396939_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4690-3p | 119396936 | 119396943 | 8mer-1a | 119396924 | 119396943 | 165.00 | -31.39 |
CAediting_423834 | chr5_119396939_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-5685 | 119396936 | 119396943 | 8mer-1a | 119396923 | 119396943 | 149.00 | -19.15 |
CAediting_423839 | chr5_119396997_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-526b-5p | 119396991 | 119396998 | 8mer-1a | 119396978 | 119396998 | 145.00 | -12.24 |
CAediting_423841 | chr5_119398425_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-513a-5p | 119398419 | 119398425 | 7mer-m8 | 119398409 | 119398426 | 152.00 | -17.32 |
CAediting_423841 | chr5_119398425_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-513a-5p | 119398419 | 119398425 | 7mer-m8 | 119398409 | 119398426 | 152.00 | -17.32 |
CAediting_423841 | chr5_119398425_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-638 | 119398424 | 119398430 | 7mer-1a | 119398406 | 119398430 | 155.00 | -34.17 |
CAediting_423842 | chr5_119398426_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-8052 | 119398424 | 119398430 | 7mer-1a | 119398412 | 119398430 | 148.00 | -29.06 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-302a-3p | 119398430 | 119398436 | 7mer-m8 | 119398416 | 119398437 | 143.00 | -10.24 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-302b-3p | 119398430 | 119398436 | 7mer-m8 | 119398415 | 119398437 | 141.00 | -8.76 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-302c-3p | 119398430 | 119398436 | 7mer-m8 | 119398417 | 119398437 | 145.00 | -11.18 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-302d-3p | 119398430 | 119398436 | 7mer-m8 | 119398410 | 119398437 | 148.00 | -12.96 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-302e | 119398430 | 119398436 | 7mer-m8 | 119398421 | 119398437 | 141.00 | -7.84 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-372-3p | 119398430 | 119398436 | 7mer-m8 | 119398410 | 119398437 | 155.00 | -19.89 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-373-3p | 119398430 | 119398436 | 7mer-m8 | 119398415 | 119398437 | 163.00 | -21.53 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-512-3p | 119398429 | 119398435 | 7mer-m8 | 119398415 | 119398436 | 149.00 | -15.00 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-512-3p | 119398429 | 119398435 | 7mer-m8 | 119398415 | 119398436 | 149.00 | -15.00 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-520a-3p | 119398430 | 119398436 | 7mer-m8 | 119398416 | 119398437 | 140.00 | -9.78 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-520b-3p | 119398430 | 119398436 | 7mer-m8 | 119398418 | 119398437 | 141.00 | -15.27 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-520c-3p | 119398430 | 119398436 | 7mer-m8 | 119398417 | 119398437 | 146.00 | -15.27 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-520d-3p | 119398430 | 119398436 | 7mer-m8 | 119398416 | 119398437 | 140.00 | -11.84 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-520e-3p | 119398430 | 119398436 | 7mer-m8 | 119398417 | 119398437 | 140.00 | -12.07 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6506-5p | 119398425 | 119398431 | 7mer-m8 | 119398410 | 119398432 | 144.00 | -16.21 |
CAediting_423844 | chr5_119398466_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4726-3p | 119398460 | 119398466 | 7mer-m8 | 119398444 | 119398467 | 149.00 | -26.72 |
CAediting_423847 | chr5_119398482_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3176 | 119398479 | 119398485 | 7mer-m8 | 119398468 | 119398486 | 158.00 | -22.74 |
CAediting_423847 | chr5_119398482_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3922-3p | 119398479 | 119398485 | 7mer-m8 | 119398463 | 119398486 | 162.00 | -24.80 |
CAediting_423849 | chr5_119398505_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-412-3p | 119398498 | 119398504 | 7mer-m8 | 119398483 | 119398505 | 145.00 | -17.04 |
CAediting_423849 | chr5_119398505_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6754-3p | 119398498 | 119398504 | 7mer-m8 | 119398481 | 119398505 | 146.00 | -16.19 |
CAediting_423850 | chr5_119398519_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-222-5p | 119398513 | 119398520 | 8mer-1a | 119398500 | 119398520 | 141.00 | -9.81 |
CAediting_423850 | chr5_119398519_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-30a-3p | 119398515 | 119398522 | 8mer-1a | 119398498 | 119398522 | 154.00 | -11.94 |
CAediting_423850 | chr5_119398519_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-30d-3p | 119398515 | 119398522 | 8mer-1a | 119398500 | 119398522 | 153.00 | -12.10 |
CAediting_423850 | chr5_119398519_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-30e-3p | 119398515 | 119398522 | 8mer-1a | 119398498 | 119398522 | 154.00 | -14.00 |
CAediting_423850 | chr5_119398519_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-936 | 119398512 | 119398519 | 8mer-1a | 119398497 | 119398519 | 159.00 | -22.75 |
CAediting_423851 | chr5_119398520_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-325 | 119398513 | 119398520 | 8mer-1a | 119398498 | 119398520 | 145.00 | -11.15 |
CAediting_423854 | chr5_119398525_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-153-5p | 119398518 | 119398524 | 7mer-m8 | 119398503 | 119398525 | 148.00 | -8.16 |
CAediting_423854 | chr5_119398525_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3680-3p | 119398522 | 119398529 | 8mer-1a | 119398507 | 119398529 | 140.00 | -14.24 |
CAediting_423854 | chr5_119398525_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3680-3p | 119398522 | 119398529 | 8mer-1a | 119398507 | 119398529 | 140.00 | -14.24 |
CAediting_423855 | chr5_119398528_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4742-3p | 119398521 | 119398528 | 8mer-1a | 119398506 | 119398528 | 142.00 | -9.18 |
CAediting_423855 | chr5_119398528_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4778-5p | 119398524 | 119398530 | 7mer-m8 | 119398510 | 119398531 | 152.00 | -16.23 |
CAediting_423857 | chr5_119398559_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-513a-5p | 119398553 | 119398559 | 7mer-m8 | 119398543 | 119398560 | 156.00 | -17.28 |
CAediting_423857 | chr5_119398559_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-513a-5p | 119398553 | 119398559 | 7mer-m8 | 119398543 | 119398560 | 156.00 | -17.28 |
CAediting_423857 | chr5_119398559_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-638 | 119398558 | 119398564 | 7mer-1a | 119398540 | 119398564 | 169.00 | -38.99 |
CAediting_423858 | chr5_119398560_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-8052 | 119398558 | 119398564 | 7mer-1a | 119398546 | 119398564 | 143.00 | -23.67 |
CAediting_423865 | chr5_119398612_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1281 | 119398605 | 119398611 | 7mer-m8 | 119398596 | 119398612 | 145.00 | -17.85 |
CAediting_423866 | chr5_119398614_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6747-3p | 119398607 | 119398613 | 7mer-m8 | 119398594 | 119398614 | 146.00 | -20.92 |
CAediting_423866 | chr5_119398614_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6752-3p | 119398608 | 119398614 | 7mer-m8 | 119398595 | 119398615 | 147.00 | -20.23 |
CAediting_423866 | chr5_119398614_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6801-3p | 119398609 | 119398615 | 7mer-m8 | 119398600 | 119398616 | 153.00 | -27.09 |
CAediting_423866 | chr5_119398614_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6810-3p | 119398609 | 119398615 | 7mer-m8 | 119398593 | 119398616 | 161.00 | -26.11 |
CAediting_423867 | chr5_119398630_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-149-5p | 119398623 | 119398629 | 7mer-m8 | 119398608 | 119398630 | 152.00 | -22.11 |
CAediting_423791 | chr5_119394868_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-10399-3p | 119394862 | 119394868 | 7mer-m8 | 119394852 | 119394869 | 146.00 | -25.78 |
CAediting_423791 | chr5_119394868_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3615 | 119394863 | 119394869 | 7mer-m8 | 119394851 | 119394870 | 149.00 | -22.67 |
CAediting_423791 | chr5_119394868_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4639-3p | 119394865 | 119394871 | 7mer-m8 | 119394853 | 119394872 | 140.00 | -12.60 |
CAediting_423821 | chr5_119396890_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3943 | 119396887 | 119396894 | 8mer-1a | 119396874 | 119396894 | 146.00 | -22.38 |
CAediting_423832 | chr5_119396928_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6747-3p | 119396921 | 119396927 | 7mer-m8 | 119396908 | 119396928 | 151.00 | -29.22 |
CAediting_423832 | chr5_119396928_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6752-3p | 119396922 | 119396928 | 7mer-m8 | 119396908 | 119396929 | 157.00 | -31.51 |
CAediting_423832 | chr5_119396928_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6801-3p | 119396923 | 119396929 | 7mer-m8 | 119396911 | 119396930 | 158.00 | -26.95 |
CAediting_423832 | chr5_119396928_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6810-3p | 119396923 | 119396929 | 7mer-m8 | 119396907 | 119396930 | 170.00 | -33.67 |
CAediting_423852 | chr5_119398521_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-630 | 119398519 | 119398526 | 8mer-1a | 119398506 | 119398526 | 158.00 | -15.14 |
CAediting_423860 | chr5_119398592_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-8057 | 119398588 | 119398594 | 7mer-m8 | 119398575 | 119398595 | 141.00 | -17.91 |
CAediting_423863 | chr5_119398601_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-10400-3p | 119398598 | 119398604 | 7mer-m8 | 119398584 | 119398605 | 140.00 | -21.89 |
CAediting_423863 | chr5_119398601_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4437 | 119398597 | 119398604 | 8mer-1a | 119398584 | 119398604 | 146.00 | -21.16 |
CAediting_423863 | chr5_119398601_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4674 | 119398598 | 119398604 | 7mer-m8 | 119398585 | 119398605 | 147.00 | -23.78 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_423817 | chr5_119396873_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-10399-5p | 119396868 | 119396874 | 7mer-m8 | 119396856 | 119396875 | 149 | -12.94 |
CAediting_423818 | chr5_119396874_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-10399-5p | 119396868 | 119396874 | 7mer-m8 | 119396856 | 119396875 | 149 | -12.94 |
CAediting_423841 | chr5_119398425_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-10399-5p | 119398420 | 119398426 | 7mer-m8 | 119398406 | 119398427 | 144 | -11.88 |
CAediting_423842 | chr5_119398426_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-10399-5p | 119398420 | 119398426 | 7mer-m8 | 119398406 | 119398427 | 144 | -11.88 |
CAediting_423857 | chr5_119398559_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-10399-5p | 119398554 | 119398560 | 7mer-m8 | 119398540 | 119398561 | 148 | -9.82 |
CAediting_423858 | chr5_119398560_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-10399-5p | 119398554 | 119398560 | 7mer-m8 | 119398540 | 119398561 | 148 | -9.82 |
CAediting_423796 | chr5_119396773_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1245a | 119396768 | 119396774 | 7mer-m8 | 119396755 | 119396775 | 147 | -18.36 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1271-3p | 119396861 | 119396867 | 7mer-m8 | 119396846 | 119396868 | 155 | -22.65 |
CAediting_423775 | chr5_119394655_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1287-3p | 119394650 | 119394657 | 8mer-1a | 119394636 | 119394657 | 152 | -16.2 |
CAediting_423776 | chr5_119394657_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1287-3p | 119394650 | 119394657 | 8mer-1a | 119394636 | 119394657 | 152 | -16.2 |
CAediting_423803 | chr5_119396806_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1306-3p | 119396802 | 119396808 | 7mer-m8 | 119396792 | 119396809 | 152 | -23.71 |
CAediting_423804 | chr5_119396807_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1306-3p | 119396802 | 119396808 | 7mer-m8 | 119396792 | 119396809 | 152 | -23.71 |
CAediting_423864 | chr5_119398605_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1343-3p | 119398601 | 119398607 | 7mer-m8 | 119398587 | 119398608 | 140 | -20.8 |
CAediting_423860 | chr5_119398592_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-140-5p | 119398590 | 119398596 | 7mer-m8 | 119398574 | 119398597 | 150 | -16.93 |
CAediting_423861 | chr5_119398595_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-140-5p | 119398590 | 119398596 | 7mer-m8 | 119398574 | 119398597 | 150 | -16.93 |
CAediting_423795 | chr5_119396743_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-148b-5p | 119396741 | 119396747 | 7mer-m8 | 119396726 | 119396748 | 150 | -14.4 |
CAediting_423836 | chr5_119396951_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-150-3p | 119396947 | 119396953 | 7mer-m8 | 119396933 | 119396954 | 148 | -15.72 |
CAediting_423837 | chr5_119396954_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-150-3p | 119396947 | 119396953 | 7mer-m8 | 119396933 | 119396954 | 148 | -15.72 |
CAediting_423821 | chr5_119396890_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-150-5p | 119396884 | 119396890 | 7mer-m8 | 119396870 | 119396891 | 140 | -13.49 |
CAediting_423838 | chr5_119396964_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-17-3p | 119396958 | 119396964 | 7mer-m8 | 119396944 | 119396965 | 152 | -16.86 |
CAediting_423805 | chr5_119396816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-193b-5p | 119396814 | 119396821 | 8mer-1a | 119396800 | 119396821 | 142 | -16.06 |
CAediting_423806 | chr5_119396817_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-193b-5p | 119396814 | 119396821 | 8mer-1a | 119396800 | 119396821 | 142 | -16.06 |
CAediting_423849 | chr5_119398505_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-193b-5p | 119398502 | 119398509 | 8mer-1a | 119398488 | 119398509 | 142 | -13.71 |
CAediting_423824 | chr5_119396900_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1976 | 119396897 | 119396904 | 8mer-1a | 119396883 | 119396904 | 152 | -20.85 |
CAediting_423825 | chr5_119396903_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1976 | 119396897 | 119396904 | 8mer-1a | 119396883 | 119396904 | 152 | -20.85 |
CAediting_423859 | chr5_119398586_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1976 | 119398583 | 119398590 | 8mer-1a | 119398570 | 119398590 | 149 | -21.37 |
CAediting_423860 | chr5_119398592_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-203a-5p | 119398589 | 119398595 | 7mer-m8 | 119398573 | 119398596 | 149 | -19.38 |
CAediting_423861 | chr5_119398595_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-203a-5p | 119398589 | 119398595 | 7mer-m8 | 119398573 | 119398596 | 149 | -19.38 |
CAediting_423856 | chr5_119398543_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-217-5p | 119398539 | 119398544 | 6mer | 119398525 | 119398545 | 149 | -20.32 |
CAediting_423811 | chr5_119396835_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-223-5p | 119396833 | 119396840 | 8mer-1a | 119396818 | 119396840 | 151 | -11.81 |
CAediting_423812 | chr5_119396837_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-223-5p | 119396833 | 119396840 | 8mer-1a | 119396818 | 119396840 | 151 | -11.81 |
CAediting_423793 | chr5_119396737_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-27a-5p | 119396735 | 119396742 | 8mer-1a | 119396721 | 119396742 | 146 | -17.71 |
CAediting_423794 | chr5_119396738_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-27a-5p | 119396735 | 119396742 | 8mer-1a | 119396721 | 119396742 | 146 | -17.71 |
CAediting_423814 | chr5_119396851_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3064-5p | 119396846 | 119396852 | 7mer-1a | 119396832 | 119396852 | 146 | -20.68 |
CAediting_423814 | chr5_119396851_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3126-3p | 119396847 | 119396853 | 7mer-m8 | 119396831 | 119396854 | 142 | -15.19 |
CAediting_423815 | chr5_119396853_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3126-3p | 119396847 | 119396853 | 7mer-m8 | 119396831 | 119396854 | 142 | -15.19 |
CAediting_423856 | chr5_119398543_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3130-3p | 119398537 | 119398543 | 7mer-m8 | 119398526 | 119398544 | 143 | -18.39 |
CAediting_423856 | chr5_119398543_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3130-3p | 119398537 | 119398543 | 7mer-m8 | 119398526 | 119398544 | 143 | -18.39 |
CAediting_423806 | chr5_119396817_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3170 | 119396815 | 119396821 | 7mer-m8 | 119396801 | 119396822 | 143 | -13.97 |
CAediting_423849 | chr5_119398505_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3170 | 119398503 | 119398509 | 7mer-m8 | 119398489 | 119398510 | 140 | -14.6 |
CAediting_423778 | chr5_119394681_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3174 | 119394677 | 119394682 | 6mer | 119394659 | 119394683 | 144 | -21.37 |
CAediting_423781 | chr5_119394706_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3614-5p | 119394704 | 119394710 | 7mer-1a | 119394687 | 119394710 | 155 | -25.83 |
CAediting_423801 | chr5_119396794_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3663-5p | 119396791 | 119396797 | 7mer-m8 | 119396779 | 119396798 | 153 | -24.88 |
CAediting_423802 | chr5_119396797_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3663-5p | 119396791 | 119396797 | 7mer-m8 | 119396779 | 119396798 | 153 | -24.88 |
CAediting_423847 | chr5_119398482_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3663-5p | 119398479 | 119398485 | 7mer-m8 | 119398462 | 119398486 | 141 | -24.78 |
CAediting_423779 | chr5_119394686_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-377-5p | 119394684 | 119394690 | 7mer-m8 | 119394670 | 119394691 | 155 | -19.35 |
CAediting_423780 | chr5_119394687_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-377-5p | 119394684 | 119394690 | 7mer-m8 | 119394670 | 119394691 | 155 | -19.35 |
CAediting_423783 | chr5_119394781_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-381-3p | 119394776 | 119394781 | 6mer | 119394761 | 119394782 | 140 | -12.93 |
CAediting_423845 | chr5_119398472_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-422a | 119398467 | 119398473 | 7mer-1a | 119398452 | 119398473 | 144 | -18.78 |
CAediting_423803 | chr5_119396806_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4435 | 119396799 | 119396806 | 8mer-1a | 119396786 | 119396806 | 146 | -18.85 |
CAediting_423803 | chr5_119396806_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4435 | 119396799 | 119396806 | 8mer-1a | 119396786 | 119396806 | 146 | -18.85 |
CAediting_423845 | chr5_119398472_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4535 | 119398465 | 119398471 | 7mer-m8 | 119398455 | 119398472 | 145 | -15.55 |
CAediting_423799 | chr5_119396786_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4680-5p | 119396784 | 119396789 | 6mer | 119396770 | 119396790 | 141 | -18.31 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4715-3p | 119396856 | 119396862 | 7mer-m8 | 119396841 | 119396863 | 155 | -17.42 |
CAediting_423848 | chr5_119398495_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4716-5p | 119398493 | 119398499 | 7mer-m8 | 119398479 | 119398500 | 140 | -9.16 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4763-5p | 119396859 | 119396866 | 8mer-1a | 119396847 | 119396866 | 149 | -20.39 |
CAediting_423848 | chr5_119398495_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4781-3p | 119398491 | 119398497 | 7mer-m8 | 119398475 | 119398498 | 142 | -11.02 |
CAediting_423814 | chr5_119396851_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4794 | 119396845 | 119396852 | 8mer-1a | 119396830 | 119396852 | 146 | -15.44 |
CAediting_423818 | chr5_119396874_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-5089-5p | 119396872 | 119396878 | 7mer-m8 | 119396861 | 119396879 | 146 | -13.74 |
CAediting_423819 | chr5_119396879_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-5089-5p | 119396872 | 119396878 | 7mer-m8 | 119396861 | 119396879 | 146 | -13.74 |
CAediting_423842 | chr5_119398426_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-5089-5p | 119398424 | 119398431 | 8mer-1a | 119398412 | 119398431 | 146 | -13.81 |
CAediting_423858 | chr5_119398560_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-5089-5p | 119398558 | 119398564 | 7mer-m8 | 119398542 | 119398565 | 149 | -13.78 |
CAediting_423845 | chr5_119398472_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-514a-5p | 119398469 | 119398475 | 7mer-m8 | 119398454 | 119398476 | 145 | -16.15 |
CAediting_423845 | chr5_119398472_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-514a-5p | 119398469 | 119398475 | 7mer-m8 | 119398454 | 119398476 | 145 | -16.15 |
CAediting_423845 | chr5_119398472_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-514a-5p | 119398469 | 119398475 | 7mer-m8 | 119398454 | 119398476 | 145 | -16.15 |
CAediting_423786 | chr5_119394816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-5189-5p | 119394810 | 119394816 | 7mer-m8 | 119394792 | 119394817 | 150 | -23.03 |
CAediting_423845 | chr5_119398472_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-518c-5p | 119398468 | 119398474 | 7mer-m8 | 119398453 | 119398475 | 140 | -17.84 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-550a-3-5p | 119396861 | 119396867 | 7mer-m8 | 119396849 | 119396868 | 140 | -13.29 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-550a-5p | 119396861 | 119396867 | 7mer-m8 | 119396846 | 119396868 | 140 | -21.63 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-550a-5p | 119396861 | 119396867 | 7mer-m8 | 119396846 | 119396868 | 140 | -21.63 |
CAediting_423820 | chr5_119396883_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-562 | 119396879 | 119396885 | 7mer-m8 | 119396867 | 119396886 | 150 | -12.74 |
CAediting_423820 | chr5_119396883_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-5697 | 119396880 | 119396886 | 7mer-m8 | 119396865 | 119396887 | 149 | -18.33 |
CAediting_423788 | chr5_119394841_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-579-3p | 119394839 | 119394845 | 7mer-m8 | 119394824 | 119394846 | 142 | -7.68 |
CAediting_423789 | chr5_119394842_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-579-3p | 119394839 | 119394845 | 7mer-m8 | 119394824 | 119394846 | 142 | -7.68 |
CAediting_423790 | chr5_119394843_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-579-3p | 119394839 | 119394845 | 7mer-m8 | 119394824 | 119394846 | 142 | -7.68 |
CAediting_423813 | chr5_119396842_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-581 | 119396836 | 119396843 | 8mer-1a | 119396821 | 119396843 | 153 | -16.02 |
CAediting_423793 | chr5_119396737_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-600 | 119396733 | 119396738 | 6mer | 119396716 | 119396739 | 152 | -20.62 |
CAediting_423794 | chr5_119396738_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-600 | 119396733 | 119396738 | 6mer | 119396716 | 119396739 | 152 | -20.62 |
CAediting_423779 | chr5_119394686_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6086 | 119394684 | 119394690 | 7mer-m8 | 119394672 | 119394691 | 148 | -18.5 |
CAediting_423780 | chr5_119394687_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6086 | 119394684 | 119394690 | 7mer-m8 | 119394672 | 119394691 | 148 | -18.5 |
CAediting_423786 | chr5_119394816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-612 | 119394810 | 119394816 | 7mer-m8 | 119394794 | 119394817 | 153 | -23.17 |
CAediting_423801 | chr5_119396794_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6131 | 119396792 | 119396798 | 7mer-m8 | 119396781 | 119396799 | 140 | -18.33 |
CAediting_423802 | chr5_119396797_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6131 | 119396792 | 119396798 | 7mer-m8 | 119396781 | 119396799 | 140 | -18.33 |
CAediting_423847 | chr5_119398482_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6131 | 119398480 | 119398486 | 7mer-m8 | 119398469 | 119398487 | 140 | -18.44 |
CAediting_423817 | chr5_119396873_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6504-3p | 119396868 | 119396874 | 7mer-m8 | 119396854 | 119396875 | 145 | -13.3 |
CAediting_423818 | chr5_119396874_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6504-3p | 119396868 | 119396874 | 7mer-m8 | 119396854 | 119396875 | 145 | -13.3 |
CAediting_423857 | chr5_119398559_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6504-3p | 119398554 | 119398560 | 7mer-m8 | 119398540 | 119398561 | 144 | -8.34 |
CAediting_423858 | chr5_119398560_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6504-3p | 119398554 | 119398560 | 7mer-m8 | 119398540 | 119398561 | 144 | -8.34 |
CAediting_423819 | chr5_119396879_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6506-5p | 119396873 | 119396879 | 7mer-m8 | 119396858 | 119396880 | 144 | -16.19 |
CAediting_423843 | chr5_119398432_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6513-5p | 119398425 | 119398431 | 7mer-m8 | 119398410 | 119398432 | 152 | -16.65 |
CAediting_423779 | chr5_119394686_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6516-5p | 119394680 | 119394686 | 7mer-m8 | 119394666 | 119394687 | 142 | -11.54 |
CAediting_423780 | chr5_119394687_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6516-5p | 119394680 | 119394686 | 7mer-m8 | 119394666 | 119394687 | 142 | -11.54 |
CAediting_423786 | chr5_119394816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-661 | 119394812 | 119394818 | 7mer-m8 | 119394795 | 119394819 | 146 | -21.59 |
CAediting_423814 | chr5_119396851_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-664a-5p | 119396845 | 119396852 | 8mer-1a | 119396829 | 119396852 | 141 | -13.54 |
CAediting_423788 | chr5_119394841_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-664b-3p | 119394839 | 119394845 | 7mer-m8 | 119394825 | 119394846 | 140 | -8.75 |
CAediting_423789 | chr5_119394842_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-664b-3p | 119394839 | 119394845 | 7mer-m8 | 119394825 | 119394846 | 140 | -8.75 |
CAediting_423790 | chr5_119394843_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-664b-3p | 119394839 | 119394845 | 7mer-m8 | 119394825 | 119394846 | 140 | -8.75 |
CAediting_423864 | chr5_119398605_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6742-3p | 119398600 | 119398607 | 8mer-1a | 119398588 | 119398607 | 145 | -14.93 |
CAediting_423824 | chr5_119396900_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6747-3p | 119396895 | 119396902 | 8mer-1a | 119396881 | 119396902 | 154 | -24.49 |
CAediting_423859 | chr5_119398586_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6747-3p | 119398581 | 119398588 | 8mer-1a | 119398567 | 119398588 | 150 | -24.11 |
CAediting_423821 | chr5_119396890_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6778-3p | 119396886 | 119396892 | 7mer-m8 | 119396873 | 119396893 | 140 | -14.56 |
CAediting_423830 | chr5_119396922_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6778-3p | 119396918 | 119396925 | 8mer-1a | 119396907 | 119396925 | 151 | -22.27 |
CAediting_423864 | chr5_119398605_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6783-3p | 119398601 | 119398607 | 7mer-m8 | 119398588 | 119398608 | 146 | -16.9 |
CAediting_423844 | chr5_119398466_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6790-3p | 119398464 | 119398469 | 6mer | 119398448 | 119398470 | 141 | -26.05 |
CAediting_423830 | chr5_119396922_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6791-3p | 119396919 | 119396925 | 7mer-1a | 119396906 | 119396925 | 153 | -29.97 |
CAediting_423778 | chr5_119394681_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6807-5p | 119394674 | 119394680 | 7mer-m8 | 119394660 | 119394681 | 148 | -19.52 |
CAediting_423830 | chr5_119396922_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6836-3p | 119396919 | 119396925 | 7mer-m8 | 119396906 | 119396926 | 155 | -22.74 |
CAediting_423831 | chr5_119396926_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6836-3p | 119396919 | 119396925 | 7mer-m8 | 119396906 | 119396926 | 155 | -22.74 |
CAediting_423865 | chr5_119398612_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6836-3p | 119398605 | 119398611 | 7mer-m8 | 119398592 | 119398612 | 140 | -15.22 |
CAediting_423800 | chr5_119396792_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6843-3p | 119396790 | 119396796 | 7mer-m8 | 119396777 | 119396797 | 151 | -18.13 |
CAediting_423801 | chr5_119396794_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6843-3p | 119396790 | 119396796 | 7mer-m8 | 119396777 | 119396797 | 151 | -18.13 |
CAediting_423802 | chr5_119396797_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6843-3p | 119396790 | 119396796 | 7mer-m8 | 119396777 | 119396797 | 151 | -18.13 |
CAediting_423800 | chr5_119396792_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6848-3p | 119396790 | 119396796 | 7mer-m8 | 119396780 | 119396797 | 142 | -14.83 |
CAediting_423801 | chr5_119396794_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6848-3p | 119396790 | 119396796 | 7mer-m8 | 119396780 | 119396797 | 142 | -14.83 |
CAediting_423802 | chr5_119396797_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6848-3p | 119396790 | 119396796 | 7mer-m8 | 119396780 | 119396797 | 142 | -14.83 |
CAediting_423806 | chr5_119396817_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6855-5p | 119396815 | 119396821 | 7mer-m8 | 119396798 | 119396822 | 145 | -17.11 |
CAediting_423849 | chr5_119398505_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6855-5p | 119398503 | 119398509 | 7mer-m8 | 119398486 | 119398510 | 145 | -17.86 |
CAediting_423844 | chr5_119398466_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6861-3p | 119398464 | 119398471 | 8mer-1a | 119398454 | 119398471 | 140 | -16.87 |
CAediting_423795 | chr5_119396743_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6874-3p | 119396741 | 119396747 | 7mer-m8 | 119396726 | 119396748 | 145 | -10.93 |
CAediting_423816 | chr5_119396863_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-6894-3p | 119396860 | 119396866 | 7mer-m8 | 119396847 | 119396867 | 148 | -17.54 |
CAediting_423841 | chr5_119398425_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-7151-3p | 119398418 | 119398425 | 8mer-1a | 119398409 | 119398425 | 146 | -17.62 |
CAediting_423857 | chr5_119398559_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-7151-3p | 119398552 | 119398559 | 8mer-1a | 119398535 | 119398559 | 145 | -20.48 |
CAediting_423785 | chr5_119394804_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-7855-5p | 119394801 | 119394806 | 6mer | 119394788 | 119394807 | 148 | -30.09 |
CAediting_423786 | chr5_119394816_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-939-3p | 119394811 | 119394817 | 7mer-m8 | 119394797 | 119394818 | 142 | -16.21 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000145779.7 | ENST00000503646 | hsa-miR-200b-3p | 119394218 | 119394224 | 7mer-1a | 119394203 | 119394224 | 140 | -11.09 |
CAediting_393 | chr1_1167164_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-200b-3p | 119395634 | 119395640 | 7mer-m8 | 119395623 | 119395641 | 148 | -12.63 |
CAediting_393 | chr1_1167164_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-200b-3p | 119398023 | 119398029 | 7mer-m8 | 119398009 | 119398030 | 154 | -14.7 |
CAediting_393 | chr1_1167164_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-200b-3p | 119399045 | 119399052 | 8mer-1a | 119399025 | 119399052 | 141 | -11.9 |
CAediting_393 | chr1_1167164_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-200b-3p | 119394218 | 119394224 | 7mer-1a | 119394203 | 119394224 | 140 | -11.09 |
CAediting_688081 | chr9_63819627_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4477b | 119397653 | 119397659 | 7mer-m8 | 119397638 | 119397660 | 152 | -14.3 |
CAediting_393 | chr1_1167164_+ | ENSG00000145779.7 | ENST00000415806 | hsa-miR-200b-3p | 119394218 | 119394224 | 7mer-1a | 119394203 | 119394224 | 140 | -11.09 |
CAediting_393 | chr1_1167164_+ | ENSG00000145779.7 | ENST00000415806 | hsa-miR-200b-3p | 119393071 | 119393076 | 6mer | 119393056 | 119393077 | 148 | -16.42 |
CAediting_1351755 | chr19_40282625_- | ENSG00000145779.7 | ENST00000513374 | hsa-miR-641 | 119393659 | 119393665 | 7mer-m8 | 119393643 | 119393666 | 140 | -13.71 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000145779.7 | ENST00000503646 | hsa-miR-548aa | 119394186 | 119394192 | 7mer-m8 | 119394168 | 119394193 | 156 | -12.61 |
CAediting_1351755 | chr19_40282625_- | ENSG00000145779.7 | ENST00000503646 | hsa-miR-641 | 119393659 | 119393665 | 7mer-m8 | 119393643 | 119393666 | 140 | -13.71 |
CAediting_1054808 | chr15_66496985_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4512 | 119398146 | 119398152 | 7mer-m8 | 119398133 | 119398153 | 146 | -20.16 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-548aa | 119394819 | 119394825 | 7mer-m8 | 119394802 | 119394826 | 140 | -12.81 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-548aa | 119394186 | 119394192 | 7mer-m8 | 119394168 | 119394193 | 156 | -12.61 |
CAediting_1351755 | chr19_40282625_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-641 | 119393659 | 119393665 | 7mer-m8 | 119393643 | 119393666 | 140 | -13.71 |
CAediting_1351755 | chr19_40282625_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-641 | 119396382 | 119396387 | 6mer | 119396365 | 119396388 | 149 | -22.65 |
CAediting_228905 | chr2_188297554_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-561-3p | 119397059 | 119397065 | 7mer-m8 | 119397045 | 119397066 | 159 | -12.4 |
CAediting_228905 | chr2_188297554_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-561-3p | 119398694 | 119398700 | 7mer-m8 | 119398680 | 119398701 | 140 | -10.97 |
CAediting_604450 | chr7_133034877_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3654 | 119399294 | 119399300 | 7mer-m8 | 119399283 | 119399301 | 146 | -17.22 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000145779.7 | ENST00000415806 | hsa-miR-548aa | 119394186 | 119394192 | 7mer-m8 | 119394168 | 119394193 | 156 | -12.61 |
CAediting_1351755 | chr19_40282625_- | ENSG00000145779.7 | ENST00000415806 | hsa-miR-641 | 119393659 | 119393665 | 7mer-m8 | 119393643 | 119393666 | 140 | -13.71 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_442554 | chr5_154685830_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1303 | 119396290 | 119396297 | 8mer-1a | 119396276 | 119396297 | 152 | -18.17 |
CAediting_846604 | chr11_93733708_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-1304-3p | 119395587 | 119395593 | 7mer-m8 | 119395571 | 119395594 | 146 | -21.36 |
CAediting_1160181 | chr17_7017644_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-195-3p | 119394946 | 119394953 | 8mer-1a | 119394934 | 119394953 | 148 | -9.26 |
CAediting_1160181 | chr17_7017644_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-195-3p | 119397046 | 119397052 | 7mer-m8 | 119397033 | 119397053 | 154 | -14.9 |
CAediting_1160181 | chr17_7017644_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-195-3p | 119397664 | 119397671 | 8mer-1a | 119397650 | 119397671 | 140 | -5.19 |
CAediting_1160181 | chr17_7017644_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-195-3p | 119397887 | 119397894 | 8mer-1a | 119397872 | 119397894 | 143 | -6.94 |
CAediting_393 | chr1_1167164_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-200b-3p | 119397770 | 119397775 | 6mer | 119397755 | 119397776 | 144 | -16.45 |
CAediting_604450 | chr7_133034877_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-3654 | 119393989 | 119393996 | 8mer-1a | 119393978 | 119393996 | 145 | -13.24 |
CAediting_77128 | chr1_85133844_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-4423-3p | 119394896 | 119394902 | 7mer-m8 | 119394883 | 119394903 | 140 | -13.34 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-548aa | 119398346 | 119398352 | 7mer-m8 | 119398330 | 119398353 | 148 | -6.97 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-548aa | 119398346 | 119398352 | 7mer-m8 | 119398330 | 119398353 | 148 | -6.97 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-548aa | 119398944 | 119398950 | 7mer-m8 | 119398929 | 119398951 | 143 | -6.2 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-548aa | 119398944 | 119398950 | 7mer-m8 | 119398929 | 119398951 | 143 | -6.2 |
CAediting_228905 | chr2_188297554_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-561-3p | 119397638 | 119397645 | 8mer-1a | 119397627 | 119397645 | 147 | -7.45 |
CAediting_748296 | chr10_51299626_+ | ENSG00000145779.7 | ENST00000504771 | hsa-miR-605-3p | 119399203 | 119399209 | 7mer-m8 | 119399190 | 119399210 | 153 | -13 |
CAediting_1351755 | chr19_40282625_- | ENSG00000145779.7 | ENST00000504771 | hsa-miR-641 | 119395686 | 119395692 | 7mer-m8 | 119395670 | 119395693 | 149 | -12.96 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for TNFAIP8 |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000388882.5 | protein_coding | ||
ENST00000504771.2 | protein_coding |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_423668 | ENST00000388882.5 | chr5_119316234_+ | -184.60 | -185.00 | -190.60 |
CAediting_423669 | ENST00000388882.5 | chr5_119316239_+ | -185.40 | -185.00 | -190.60 |
CAediting_423670 | ENST00000388882.5 | chr5_119316247_+ | -187.40 | -185.00 | -190.60 |
CAediting_423671 | ENST00000388882.5 | chr5_119316272_+ | -188.20 | -185.00 | -190.60 |
CAediting_423775 | ENST00000504771.2 | chr5_119394655_+ | -2688.10 | -2681.50 | -2745.60 |
CAediting_423776 | ENST00000504771.2 | chr5_119394657_+ | -2683.50 | -2681.50 | -2745.60 |
CAediting_423777 | ENST00000504771.2 | chr5_119394658_+ | -2687.70 | -2681.50 | -2745.60 |
CAediting_423778 | ENST00000504771.2 | chr5_119394681_+ | -2681.10 | -2681.50 | -2745.60 |
CAediting_423779 | ENST00000504771.2 | chr5_119394686_+ | -2681.20 | -2681.50 | -2745.60 |
CAediting_423780 | ENST00000504771.2 | chr5_119394687_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423781 | ENST00000504771.2 | chr5_119394706_+ | -2681.20 | -2681.50 | -2745.60 |
CAediting_423782 | ENST00000504771.2 | chr5_119394746_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423783 | ENST00000504771.2 | chr5_119394781_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423784 | ENST00000504771.2 | chr5_119394787_+ | -2681.20 | -2681.50 | -2745.60 |
CAediting_423785 | ENST00000504771.2 | chr5_119394804_+ | -2681.10 | -2681.50 | -2745.60 |
CAediting_423786 | ENST00000504771.2 | chr5_119394816_+ | -2680.80 | -2681.50 | -2745.60 |
CAediting_423787 | ENST00000504771.2 | chr5_119394829_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423788 | ENST00000504771.2 | chr5_119394841_+ | -2680.40 | -2681.50 | -2745.60 |
CAediting_423789 | ENST00000504771.2 | chr5_119394842_+ | -2684.80 | -2681.50 | -2745.60 |
CAediting_423790 | ENST00000504771.2 | chr5_119394843_+ | -2684.90 | -2681.50 | -2745.60 |
CAediting_423791 | ENST00000504771.2 | chr5_119394868_+ | -2681.40 | -2681.50 | -2745.60 |
CAediting_423792 | ENST00000504771.2 | chr5_119394869_+ | -2681.20 | -2681.50 | -2745.60 |
CAediting_423793 | ENST00000504771.2 | chr5_119396737_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423794 | ENST00000504771.2 | chr5_119396738_+ | -2681.20 | -2681.50 | -2745.60 |
CAediting_423795 | ENST00000504771.2 | chr5_119396743_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423796 | ENST00000504771.2 | chr5_119396773_+ | -2681.10 | -2681.50 | -2745.60 |
CAediting_423797 | ENST00000504771.2 | chr5_119396778_+ | -2681.00 | -2681.50 | -2745.60 |
CAediting_423798 | ENST00000504771.2 | chr5_119396783_+ | -2680.50 | -2681.50 | -2745.60 |
CAediting_423799 | ENST00000504771.2 | chr5_119396786_+ | -2681.30 | -2681.50 | -2745.60 |
CAediting_423800 | ENST00000504771.2 | chr5_119396792_+ | -2680.70 | -2681.50 | -2745.60 |
CAediting_423801 | ENST00000504771.2 | chr5_119396794_+ | -2680.80 | -2681.50 | -2745.60 |
CAediting_423802 | ENST00000504771.2 | chr5_119396797_+ | -2680.70 | -2681.50 | -2745.60 |
CAediting_423803 | ENST00000504771.2 | chr5_119396806_+ | -2683.90 | -2681.50 | -2745.60 |
CAediting_423804 | ENST00000504771.2 | chr5_119396807_+ | -2682.80 | -2681.50 | -2745.60 |
CAediting_423805 | ENST00000504771.2 | chr5_119396816_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423806 | ENST00000504771.2 | chr5_119396817_+ | -2683.00 | -2681.50 | -2745.60 |
CAediting_423807 | ENST00000504771.2 | chr5_119396828_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423808 | ENST00000504771.2 | chr5_119396832_+ | -2682.70 | -2681.50 | -2745.60 |
CAediting_423809 | ENST00000504771.2 | chr5_119396833_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423810 | ENST00000504771.2 | chr5_119396834_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423811 | ENST00000504771.2 | chr5_119396835_+ | -2684.50 | -2681.50 | -2745.60 |
CAediting_423812 | ENST00000504771.2 | chr5_119396837_+ | -2682.90 | -2681.50 | -2745.60 |
CAediting_423813 | ENST00000504771.2 | chr5_119396842_+ | -2684.60 | -2681.50 | -2745.60 |
CAediting_423814 | ENST00000504771.2 | chr5_119396851_+ | -2680.80 | -2681.50 | -2745.60 |
CAediting_423815 | ENST00000504771.2 | chr5_119396853_+ | -2682.90 | -2681.50 | -2745.60 |
CAediting_423816 | ENST00000504771.2 | chr5_119396863_+ | -2681.20 | -2681.50 | -2745.60 |
CAediting_423817 | ENST00000504771.2 | chr5_119396873_+ | -2682.30 | -2681.50 | -2745.60 |
CAediting_423818 | ENST00000504771.2 | chr5_119396874_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423819 | ENST00000504771.2 | chr5_119396879_+ | -2680.80 | -2681.50 | -2745.60 |
CAediting_423820 | ENST00000504771.2 | chr5_119396883_+ | -2682.30 | -2681.50 | -2745.60 |
CAediting_423821 | ENST00000504771.2 | chr5_119396890_+ | -2681.00 | -2681.50 | -2745.60 |
CAediting_423822 | ENST00000504771.2 | chr5_119396895_+ | -2683.50 | -2681.50 | -2745.60 |
CAediting_423823 | ENST00000504771.2 | chr5_119396896_+ | -2683.90 | -2681.50 | -2745.60 |
CAediting_423824 | ENST00000504771.2 | chr5_119396900_+ | -2684.90 | -2681.50 | -2745.60 |
CAediting_423825 | ENST00000504771.2 | chr5_119396903_+ | -2684.90 | -2681.50 | -2745.60 |
CAediting_423826 | ENST00000504771.2 | chr5_119396905_+ | -2682.80 | -2681.50 | -2745.60 |
CAediting_423827 | ENST00000504771.2 | chr5_119396906_+ | -2681.80 | -2681.50 | -2745.60 |
CAediting_423828 | ENST00000504771.2 | chr5_119396914_+ | -2683.00 | -2681.50 | -2745.60 |
CAediting_423829 | ENST00000504771.2 | chr5_119396915_+ | -2684.70 | -2681.50 | -2745.60 |
CAediting_423830 | ENST00000504771.2 | chr5_119396922_+ | -2681.80 | -2681.50 | -2745.60 |
CAediting_423831 | ENST00000504771.2 | chr5_119396926_+ | -2683.80 | -2681.50 | -2745.60 |
CAediting_423832 | ENST00000504771.2 | chr5_119396928_+ | -2683.30 | -2681.50 | -2745.60 |
CAediting_423833 | ENST00000504771.2 | chr5_119396935_+ | -2680.80 | -2681.50 | -2745.60 |
CAediting_423834 | ENST00000504771.2 | chr5_119396939_+ | -2684.70 | -2681.50 | -2745.60 |
CAediting_423835 | ENST00000504771.2 | chr5_119396946_+ | -2686.40 | -2681.50 | -2745.60 |
CAediting_423836 | ENST00000504771.2 | chr5_119396951_+ | -2683.70 | -2681.50 | -2745.60 |
CAediting_423837 | ENST00000504771.2 | chr5_119396954_+ | -2684.30 | -2681.50 | -2745.60 |
CAediting_423838 | ENST00000504771.2 | chr5_119396964_+ | -2680.70 | -2681.50 | -2745.60 |
CAediting_423839 | ENST00000504771.2 | chr5_119396997_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423840 | ENST00000504771.2 | chr5_119396998_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423841 | ENST00000504771.2 | chr5_119398425_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423842 | ENST00000504771.2 | chr5_119398426_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423843 | ENST00000504771.2 | chr5_119398432_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423844 | ENST00000504771.2 | chr5_119398466_+ | -2680.50 | -2681.50 | -2745.60 |
CAediting_423845 | ENST00000504771.2 | chr5_119398472_+ | -2685.50 | -2681.50 | -2745.60 |
CAediting_423846 | ENST00000504771.2 | chr5_119398480_+ | -2681.20 | -2681.50 | -2745.60 |
CAediting_423847 | ENST00000504771.2 | chr5_119398482_+ | -2680.90 | -2681.50 | -2745.60 |
CAediting_423848 | ENST00000504771.2 | chr5_119398495_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423849 | ENST00000504771.2 | chr5_119398505_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423850 | ENST00000504771.2 | chr5_119398519_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423851 | ENST00000504771.2 | chr5_119398520_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423852 | ENST00000504771.2 | chr5_119398521_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423853 | ENST00000504771.2 | chr5_119398522_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423854 | ENST00000504771.2 | chr5_119398525_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423855 | ENST00000504771.2 | chr5_119398528_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423856 | ENST00000504771.2 | chr5_119398543_+ | -2686.20 | -2681.50 | -2745.60 |
CAediting_423857 | ENST00000504771.2 | chr5_119398559_+ | -2681.60 | -2681.50 | -2745.60 |
CAediting_423858 | ENST00000504771.2 | chr5_119398560_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423859 | ENST00000504771.2 | chr5_119398586_+ | -2680.80 | -2681.50 | -2745.60 |
CAediting_423860 | ENST00000504771.2 | chr5_119398592_+ | -2681.20 | -2681.50 | -2745.60 |
CAediting_423861 | ENST00000504771.2 | chr5_119398595_+ | -2681.10 | -2681.50 | -2745.60 |
CAediting_423862 | ENST00000504771.2 | chr5_119398600_+ | -2681.00 | -2681.50 | -2745.60 |
CAediting_423863 | ENST00000504771.2 | chr5_119398601_+ | -2681.50 | -2681.50 | -2745.60 |
CAediting_423864 | ENST00000504771.2 | chr5_119398605_+ | -2685.40 | -2681.50 | -2745.60 |
CAediting_423865 | ENST00000504771.2 | chr5_119398612_+ | -2680.80 | -2681.50 | -2745.60 |
CAediting_423866 | ENST00000504771.2 | chr5_119398614_+ | -2680.60 | -2681.50 | -2745.60 |
CAediting_423867 | ENST00000504771.2 | chr5_119398630_+ | -2681.10 | -2681.50 | -2745.60 |
CAediting_423868 | ENST00000504771.2 | chr5_119398637_+ | -2685.30 | -2681.50 | -2745.60 |
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Relation with ADAR for TNFAIP8 |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
KIRC | CAediting_423812 | chr5_119396837_+ | 0.0290371916776983 | 0.214157236015538 | . | . | . | . |
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Relation with cancer stages for TNFAIP8 |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
Top |
Relation with survival for TNFAIP8 |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
Top |
RelatedDrugs for TNFAIP8 |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TNFAIP8 |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
TNFAIP8 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
TNFAIP8 | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
TNFAIP8 | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human |
TNFAIP8 | C0279626 | Squamous cell carcinoma of esophagus | 1 | CTD_human |
TNFAIP8 | C3495559 | Juvenile arthritis | 1 | CTD_human |
TNFAIP8 | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human |
TNFAIP8 | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human |
TNFAIP8 | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |