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Editing gene: FAM133B (CAeditome ID:257415)

Gene summary for FAM133B

Gene summary

Gene information	Gene symbol	FAM133B
	Gene ID	257415
	Gene name	family with sequence similarity 133 member B
	Synonyms	-
	Cytomap	7q21.2
	Type of gene	protein-coding
	Description	protein FAM133B
	Modification date	20210518
	UniProtAcc	Q5BKY9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for FAM133B

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000234545.6

RNA A-to-I editing events in Cancer.

CAediting_573751(92565181, -), CAediting_573752(92565374, -), CAediting_573753(92565499, -), CAediting_573754(92565735, -), CAediting_573755(92565736, -), CAediting_573756(92566406, -), CAediting_573757(92566407, -), CAediting_573758(92566444, -), CAediting_573759(92566559, -), CAediting_573760(92566580, -), CAediting_573761(92566595, -), CAediting_573762(92566628, -), CAediting_573763(92566635, -), CAediting_573764(92566954, -), CAediting_573765(92566966, -), CAediting_573766(92566981, -), CAediting_573767(92566990, -), CAediting_573768(92566993, -), CAediting_573769(92566994, -), CAediting_573770(92567007, -), CAediting_573771(92567019, -), CAediting_573772(92567023, -), CAediting_573773(92567028, -), CAediting_573774(92567039, -), CAediting_573775(92567046, -), CAediting_573776(92567094, -), CAediting_573777(92567096, -), CAediting_573778(92567102, -), CAediting_573779(92567106, -), CAediting_573780(92567109, -), CAediting_573781(92567134, -), CAediting_573782(92567135, -), CAediting_573783(92567165, -), CAediting_573784(92567179, -), CAediting_573785(92567184, -), CAediting_573786(92567215, -), CAediting_573787(92567217, -), CAediting_573788(92567799, -), CAediting_573789(92567826, -), CAediting_573790(92567855, -), CAediting_573791(92567860, -), CAediting_573792(92567872, -), CAediting_573793(92567888, -), CAediting_573794(92567896, -), CAediting_573795(92567901, -), CAediting_573796(92567908, -), CAediting_573797(92567920, -), CAediting_573798(92567922, -), CAediting_573799(92567924, -), CAediting_573800(92567996, -), CAediting_573801(92568001, -), CAediting_573802(92568010, -), CAediting_573803(92568014, -), CAediting_573804(92568028, -), CAediting_573805(92568031, -), CAediting_573806(92568036, -), CAediting_573807(92568058, -), CAediting_573808(92568168, -), CAediting_573809(92568185, -), CAediting_573810(92568189, -), CAediting_573811(92568194, -), CAediting_573812(92568195, -), CAediting_573813(92568425, -), CAediting_573814(92568454, -), CAediting_573815(92568460, -), CAediting_573816(92568479, -), CAediting_573817(92568490, -), CAediting_573818(92568518, -), CAediting_573819(92568522, -), CAediting_573820(92568546, -), CAediting_573821(92568600, -), CAediting_573822(92568605, -), CAediting_573823(92568632, -), CAediting_573824(92568640, -), CAediting_573825(92568641, -), CAediting_573826(92568663, -), CAediting_573827(92572636, -), CAediting_573828(92573197, -), CAediting_573829(92573215, -), CAediting_573830(92573230, -), CAediting_573831(92573246, -), CAediting_573832(92573260, -), CAediting_573833(92573265, -), CAediting_573834(92573266, -), CAediting_573835(92573270, -), CAediting_573836(92573282, -), CAediting_573837(92573306, -), CAediting_573838(92573319, -), CAediting_573839(92573337, -), CAediting_573840(92573343, -), CAediting_573841(92573354, -), CAediting_573842(92573358, -), CAediting_573843(92573387, -), CAediting_573844(92573388, -), CAediting_573845(92573401, -), CAediting_573846(92573421, -), CAediting_573847(92573422, -), CAediting_573848(92573428, -), CAediting_573849(92573430, -), CAediting_573850(92573444, -), CAediting_573851(92573446, -), CAediting_573852(92573465, -), CAediting_573853(92573977, -), CAediting_573854(92573999, -), CAediting_573855(92575259, -), CAediting_573856(92575308, -), CAediting_573857(92575330, -), CAediting_573858(92575410, -), CAediting_573859(92578801, -), CAediting_573860(92578866, -), CAediting_573861(92578874, -), CAediting_573862(92579186, -), CAediting_573863(92579274, -), CAediting_573864(92584203, -),

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RNA editing positional annotations for FAM133B using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_573751	chr7_92565181_-	ncRNA_intronic
CAediting_573752	chr7_92565374_-	ncRNA_intronic
CAediting_573753	chr7_92565499_-	ncRNA_intronic
CAediting_573754	chr7_92565735_-	ncRNA_intronic
CAediting_573755	chr7_92565736_-	ncRNA_intronic
CAediting_573756	chr7_92566406_-	ncRNA_intronic
CAediting_573757	chr7_92566407_-	ncRNA_intronic
CAediting_573758	chr7_92566444_-	ncRNA_intronic
CAediting_573759	chr7_92566559_-	ncRNA_intronic
CAediting_573760	chr7_92566580_-	ncRNA_intronic
CAediting_573761	chr7_92566595_-	ncRNA_intronic
CAediting_573762	chr7_92566628_-	ncRNA_intronic
CAediting_573763	chr7_92566635_-	ncRNA_intronic
CAediting_573764	chr7_92566954_-	ncRNA_intronic
CAediting_573765	chr7_92566966_-	ncRNA_intronic
CAediting_573766	chr7_92566981_-	ncRNA_intronic
CAediting_573767	chr7_92566990_-	ncRNA_intronic
CAediting_573768	chr7_92566993_-	ncRNA_intronic
CAediting_573769	chr7_92566994_-	ncRNA_intronic
CAediting_573770	chr7_92567007_-	ncRNA_intronic
CAediting_573771	chr7_92567019_-	ncRNA_intronic
CAediting_573772	chr7_92567023_-	ncRNA_intronic
CAediting_573773	chr7_92567028_-	ncRNA_intronic
CAediting_573774	chr7_92567039_-	ncRNA_intronic
CAediting_573775	chr7_92567046_-	ncRNA_intronic
CAediting_573776	chr7_92567094_-	ncRNA_intronic
CAediting_573777	chr7_92567096_-	ncRNA_intronic
CAediting_573778	chr7_92567102_-	ncRNA_intronic
CAediting_573779	chr7_92567106_-	ncRNA_intronic
CAediting_573780	chr7_92567109_-	ncRNA_intronic
CAediting_573781	chr7_92567134_-	ncRNA_intronic
CAediting_573782	chr7_92567135_-	ncRNA_intronic
CAediting_573783	chr7_92567165_-	ncRNA_intronic
CAediting_573784	chr7_92567179_-	ncRNA_intronic
CAediting_573785	chr7_92567184_-	ncRNA_intronic
CAediting_573786	chr7_92567215_-	ncRNA_intronic
CAediting_573787	chr7_92567217_-	ncRNA_intronic
CAediting_573788	chr7_92567799_-	ncRNA_intronic
CAediting_573789	chr7_92567826_-	ncRNA_intronic
CAediting_573790	chr7_92567855_-	ncRNA_intronic
CAediting_573791	chr7_92567860_-	ncRNA_intronic
CAediting_573792	chr7_92567872_-	ncRNA_intronic
CAediting_573793	chr7_92567888_-	ncRNA_intronic
CAediting_573794	chr7_92567896_-	ncRNA_intronic
CAediting_573795	chr7_92567901_-	ncRNA_intronic
CAediting_573796	chr7_92567908_-	ncRNA_intronic
CAediting_573797	chr7_92567920_-	ncRNA_intronic
CAediting_573798	chr7_92567922_-	ncRNA_intronic
CAediting_573799	chr7_92567924_-	ncRNA_intronic
CAediting_573800	chr7_92567996_-	ncRNA_intronic
CAediting_573801	chr7_92568001_-	ncRNA_intronic
CAediting_573802	chr7_92568010_-	ncRNA_intronic
CAediting_573803	chr7_92568014_-	ncRNA_intronic
CAediting_573804	chr7_92568028_-	ncRNA_intronic
CAediting_573805	chr7_92568031_-	ncRNA_intronic
CAediting_573806	chr7_92568036_-	ncRNA_intronic
CAediting_573807	chr7_92568058_-	ncRNA_intronic
CAediting_573808	chr7_92568168_-	ncRNA_intronic
CAediting_573809	chr7_92568185_-	ncRNA_intronic
CAediting_573810	chr7_92568189_-	ncRNA_intronic
CAediting_573811	chr7_92568194_-	ncRNA_intronic
CAediting_573812	chr7_92568195_-	ncRNA_intronic
CAediting_573813	chr7_92568425_-	ncRNA_intronic
CAediting_573814	chr7_92568454_-	ncRNA_intronic
CAediting_573815	chr7_92568460_-	ncRNA_intronic
CAediting_573816	chr7_92568479_-	ncRNA_intronic
CAediting_573817	chr7_92568490_-	ncRNA_intronic
CAediting_573818	chr7_92568518_-	ncRNA_intronic
CAediting_573819	chr7_92568522_-	ncRNA_intronic
CAediting_573820	chr7_92568546_-	ncRNA_intronic
CAediting_573821	chr7_92568600_-	ncRNA_intronic
CAediting_573822	chr7_92568605_-	ncRNA_intronic
CAediting_573823	chr7_92568632_-	ncRNA_intronic
CAediting_573824	chr7_92568640_-	ncRNA_intronic
CAediting_573825	chr7_92568641_-	ncRNA_intronic
CAediting_573826	chr7_92568663_-	ncRNA_intronic
CAediting_573827	chr7_92572636_-	ncRNA_intronic
CAediting_573828	chr7_92573197_-	ncRNA_intronic
CAediting_573829	chr7_92573215_-	ncRNA_intronic
CAediting_573830	chr7_92573230_-	ncRNA_intronic
CAediting_573831	chr7_92573246_-	ncRNA_intronic
CAediting_573832	chr7_92573260_-	ncRNA_intronic
CAediting_573833	chr7_92573265_-	ncRNA_intronic
CAediting_573834	chr7_92573266_-	ncRNA_intronic
CAediting_573835	chr7_92573270_-	ncRNA_intronic
CAediting_573836	chr7_92573282_-	ncRNA_intronic
CAediting_573837	chr7_92573306_-	ncRNA_intronic
CAediting_573838	chr7_92573319_-	ncRNA_intronic
CAediting_573839	chr7_92573337_-	ncRNA_intronic
CAediting_573840	chr7_92573343_-	ncRNA_intronic
CAediting_573841	chr7_92573354_-	ncRNA_intronic
CAediting_573842	chr7_92573358_-	ncRNA_intronic
CAediting_573843	chr7_92573387_-	ncRNA_intronic
CAediting_573844	chr7_92573388_-	ncRNA_intronic
CAediting_573845	chr7_92573401_-	ncRNA_intronic
CAediting_573846	chr7_92573421_-	ncRNA_intronic
CAediting_573847	chr7_92573422_-	ncRNA_intronic
CAediting_573848	chr7_92573428_-	ncRNA_intronic
CAediting_573849	chr7_92573430_-	ncRNA_intronic
CAediting_573850	chr7_92573444_-	ncRNA_intronic
CAediting_573851	chr7_92573446_-	ncRNA_intronic
CAediting_573852	chr7_92573465_-	ncRNA_intronic
CAediting_573853	chr7_92573977_-	ncRNA_intronic
CAediting_573854	chr7_92573999_-	ncRNA_intronic
CAediting_573855	chr7_92575259_-	ncRNA_intronic
CAediting_573856	chr7_92575308_-	ncRNA_intronic
CAediting_573857	chr7_92575330_-	ncRNA_intronic
CAediting_573858	chr7_92575410_-	ncRNA_intronic
CAediting_573859	chr7_92578801_-	ncRNA_intronic
CAediting_573860	chr7_92578866_-	ncRNA_intronic
CAediting_573861	chr7_92578874_-	ncRNA_intronic
CAediting_573862	chr7_92579186_-	ncRNA_exonic
CAediting_573863	chr7_92579274_-	ncRNA_exonic
CAediting_573864	chr7_92584203_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_573751	chr7_92565181_-	SINE	Alu	AluSg7
CAediting_573752	chr7_92565374_-	SINE	Alu	AluSg7
CAediting_573753	chr7_92565499_-	SINE	Alu	AluY
CAediting_573754	chr7_92565735_-	SINE	Alu	AluY
CAediting_573755	chr7_92565736_-	SINE	Alu	AluY
CAediting_573756	chr7_92566406_-	SINE	Alu	AluJo
CAediting_573757	chr7_92566407_-	SINE	Alu	AluJo
CAediting_573758	chr7_92566444_-	SINE	Alu	AluJo
CAediting_573759	chr7_92566559_-	SINE	Alu	AluJo
CAediting_573760	chr7_92566580_-	SINE	Alu	AluJo
CAediting_573761	chr7_92566595_-	SINE	Alu	AluJo
CAediting_573762	chr7_92566628_-	SINE	Alu	AluJo
CAediting_573763	chr7_92566635_-	SINE	Alu	AluJo
CAediting_573764	chr7_92566954_-	SINE	Alu	AluJr
CAediting_573765	chr7_92566966_-	SINE	Alu	AluJr
CAediting_573766	chr7_92566981_-	SINE	Alu	AluJr
CAediting_573767	chr7_92566990_-	SINE	Alu	AluJr
CAediting_573768	chr7_92566993_-	SINE	Alu	AluJr
CAediting_573769	chr7_92566994_-	SINE	Alu	AluJr
CAediting_573770	chr7_92567007_-	SINE	Alu	AluJr
CAediting_573771	chr7_92567019_-	SINE	Alu	AluJr
CAediting_573772	chr7_92567023_-	SINE	Alu	AluJr
CAediting_573773	chr7_92567028_-	SINE	Alu	AluJr
CAediting_573774	chr7_92567039_-	SINE	Alu	AluJr
CAediting_573775	chr7_92567046_-	SINE	Alu	AluJr
CAediting_573776	chr7_92567094_-	SINE	Alu	AluJr
CAediting_573777	chr7_92567096_-	SINE	Alu	AluJr
CAediting_573778	chr7_92567102_-	SINE	Alu	AluJr
CAediting_573779	chr7_92567106_-	SINE	Alu	AluJr
CAediting_573780	chr7_92567109_-	SINE	Alu	AluJr
CAediting_573781	chr7_92567134_-	SINE	Alu	AluJr
CAediting_573782	chr7_92567135_-	SINE	Alu	AluJr
CAediting_573783	chr7_92567165_-	SINE	Alu	AluJr
CAediting_573784	chr7_92567179_-	SINE	Alu	AluJr
CAediting_573785	chr7_92567184_-	SINE	Alu	AluJr
CAediting_573786	chr7_92567215_-	SINE	Alu	AluJr
CAediting_573787	chr7_92567217_-	SINE	Alu	AluJr
CAediting_573788	chr7_92567799_-	SINE	Alu	AluSx
CAediting_573789	chr7_92567826_-	SINE	Alu	AluSx
CAediting_573790	chr7_92567855_-	SINE	Alu	AluSx
CAediting_573791	chr7_92567860_-	SINE	Alu	AluSx
CAediting_573792	chr7_92567872_-	SINE	Alu	AluSx
CAediting_573793	chr7_92567888_-	SINE	Alu	AluSx
CAediting_573794	chr7_92567896_-	SINE	Alu	AluSx
CAediting_573795	chr7_92567901_-	SINE	Alu	AluSx
CAediting_573796	chr7_92567908_-	SINE	Alu	AluSx
CAediting_573797	chr7_92567920_-	SINE	Alu	AluSx
CAediting_573798	chr7_92567922_-	SINE	Alu	AluSx
CAediting_573799	chr7_92567924_-	SINE	Alu	AluSx
CAediting_573800	chr7_92567996_-	SINE	Alu	AluSx
CAediting_573801	chr7_92568001_-	SINE	Alu	AluSx
CAediting_573802	chr7_92568010_-	SINE	Alu	AluSx
CAediting_573803	chr7_92568014_-	SINE	Alu	AluSx
CAediting_573804	chr7_92568028_-	SINE	Alu	AluSx
CAediting_573805	chr7_92568031_-	SINE	Alu	AluSx
CAediting_573806	chr7_92568036_-	SINE	Alu	AluSx
CAediting_573807	chr7_92568058_-	SINE	Alu	AluSx
CAediting_573808	chr7_92568168_-	SINE	Alu	AluJr
CAediting_573809	chr7_92568185_-	SINE	Alu	AluJr
CAediting_573810	chr7_92568189_-	SINE	Alu	AluJr
CAediting_573811	chr7_92568194_-	SINE	Alu	AluJr
CAediting_573812	chr7_92568195_-	SINE	Alu	AluJr
CAediting_573813	chr7_92568425_-	SINE	Alu	AluSq2
CAediting_573814	chr7_92568454_-	SINE	Alu	AluSq2
CAediting_573815	chr7_92568460_-	SINE	Alu	AluSq2
CAediting_573816	chr7_92568479_-	SINE	Alu	AluSq2
CAediting_573817	chr7_92568490_-	SINE	Alu	AluSq2
CAediting_573818	chr7_92568518_-	SINE	Alu	AluSq2
CAediting_573819	chr7_92568522_-	SINE	Alu	AluSq2
CAediting_573820	chr7_92568546_-	SINE	Alu	AluSq2
CAediting_573821	chr7_92568600_-	SINE	Alu	AluSq2
CAediting_573822	chr7_92568605_-	SINE	Alu	AluSq2
CAediting_573823	chr7_92568632_-	SINE	Alu	AluSq2
CAediting_573824	chr7_92568640_-	SINE	Alu	AluSq2
CAediting_573825	chr7_92568641_-	SINE	Alu	AluSq2
CAediting_573826	chr7_92568663_-	SINE	Alu	AluSq2
CAediting_573827	chr7_92572636_-	SINE	Alu	AluSx3
CAediting_573828	chr7_92573197_-	SINE	Alu	AluJr4
CAediting_573829	chr7_92573215_-	SINE	Alu	AluJr4
CAediting_573830	chr7_92573230_-	SINE	Alu	AluJr4
CAediting_573831	chr7_92573246_-	SINE	Alu	AluJr4
CAediting_573832	chr7_92573260_-	SINE	Alu	AluJr4
CAediting_573833	chr7_92573265_-	SINE	Alu	AluJr4
CAediting_573834	chr7_92573266_-	SINE	Alu	AluJr4
CAediting_573835	chr7_92573270_-	SINE	Alu	AluJr4
CAediting_573836	chr7_92573282_-	SINE	Alu	AluJr4
CAediting_573837	chr7_92573306_-	SINE	Alu	AluJr4
CAediting_573838	chr7_92573319_-	SINE	Alu	AluJr4
CAediting_573839	chr7_92573337_-	SINE	Alu	AluJr4
CAediting_573840	chr7_92573343_-	SINE	Alu	AluJr4
CAediting_573841	chr7_92573354_-	SINE	Alu	AluJr4
CAediting_573842	chr7_92573358_-	SINE	Alu	AluJr4
CAediting_573843	chr7_92573387_-	SINE	Alu	AluJr4
CAediting_573844	chr7_92573388_-	SINE	Alu	AluJr4
CAediting_573845	chr7_92573401_-	SINE	Alu	AluJr4
CAediting_573846	chr7_92573421_-	SINE	Alu	AluJr4
CAediting_573847	chr7_92573422_-	SINE	Alu	AluJr4
CAediting_573848	chr7_92573428_-	SINE	Alu	AluJr4
CAediting_573849	chr7_92573430_-	SINE	Alu	AluJr4
CAediting_573850	chr7_92573444_-	SINE	Alu	AluJr4
CAediting_573851	chr7_92573446_-	SINE	Alu	AluJr4
CAediting_573852	chr7_92573465_-	Simple_repeat	Simple_repeat	(T)n
CAediting_573853	chr7_92573977_-	SINE	Alu	AluJr4
CAediting_573854	chr7_92573999_-	SINE	Alu	AluJr4
CAediting_573855	chr7_92575259_-	SINE	Alu	AluSx
CAediting_573856	chr7_92575308_-	SINE	Alu	AluSx
CAediting_573857	chr7_92575330_-	SINE	Alu	AluSx
CAediting_573858	chr7_92575410_-	SINE	Alu	AluSx
CAediting_573859	chr7_92578801_-	SINE	Alu	AluJo
CAediting_573860	chr7_92578866_-	SINE	Alu	AluJo
CAediting_573861	chr7_92578874_-	SINE	Alu	AluJo
CAediting_573862	chr7_92579186_-	SINE	Alu	FLAM_C
CAediting_573863	chr7_92579274_-	SINE	Alu	FLAM_C
CAediting_573864	chr7_92584203_-	SINE	Alu	AluJr4

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RNA A-to-I editing events in the alternative splicing sites for FAM133B

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000234545.6.FAM133B.

Correlation between RNA A-to-I editing and PSI for ENSG00000234545.6.FAM133B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM133B

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for FAM133B

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for FAM133B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573754	chr7_92565735_-	ENSG00000234545.6	ENST00000494079	hsa-miR-8052	92565730	92565736	7mer-1a	92565730	92565748	140.00	-23.18
CAediting_573755	chr7_92565736_-	ENSG00000234545.6	ENST00000494079	hsa-miR-513a-5p	92565735	92565741	7mer-m8	92565734	92565754	142.00	-15.58
CAediting_573755	chr7_92565736_-	ENSG00000234545.6	ENST00000494079	hsa-miR-513a-5p	92565735	92565741	7mer-m8	92565734	92565754	142.00	-15.58
CAediting_573755	chr7_92565736_-	ENSG00000234545.6	ENST00000494079	hsa-miR-638	92565730	92565736	7mer-1a	92565730	92565754	161.00	-33.77

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573754	chr7_92565735_-	ENSG00000234545.6	ENST00000494079	hsa-miR-10399-5p	92565734	92565740	7mer-m8	92565733	92565750	143	-10.9
CAediting_573755	chr7_92565736_-	ENSG00000234545.6	ENST00000494079	hsa-miR-10399-5p	92565734	92565740	7mer-m8	92565733	92565750	143	-10.9
CAediting_573754	chr7_92565735_-	ENSG00000234545.6	ENST00000494079	hsa-miR-5089-5p	92565730	92565736	7mer-m8	92565729	92565749	144	-12.73
CAediting_573754	chr7_92565735_-	ENSG00000234545.6	ENST00000494079	hsa-miR-6504-3p	92565734	92565740	7mer-m8	92565733	92565752	140	-7.51
CAediting_573755	chr7_92565736_-	ENSG00000234545.6	ENST00000494079	hsa-miR-6504-3p	92565734	92565740	7mer-m8	92565733	92565752	140	-7.51
CAediting_573755	chr7_92565736_-	ENSG00000234545.6	ENST00000494079	hsa-miR-7151-3p	92565735	92565742	8mer-1a	92565735	92565757	148	-16.3

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1351755	chr19_40282625_-	ENSG00000234545.6	ENST00000438306	hsa-miR-641	92561137	92561143	7mer-1a	92561137	92561160	146	-14.5

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FAM133B

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000494079.1	protein_coding
ENST00000480397.4	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_573754	ENST00000494079.1	chr7_92565735_-	-227.70	-227.70	-227.70
CAediting_573755	ENST00000494079.1	chr7_92565736_-	-227.70	-227.70	-227.70
CAediting_573862	ENST00000480397.4	chr7_92579186_-	-113.50	-112.50	-115.90
CAediting_573863	ENST00000480397.4	chr7_92579274_-	-114.50	-112.50	-115.90

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Relation with ADAR for FAM133B

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
ESCA	CAediting_573833	chr7_92573265_-	.	.	0.00521424251586271	0.342585231732985	.	.
ESCA	CAediting_573834	chr7_92573266_-	.	.	0.0342336836438596	0.257193233082851	.	.

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Relation with cancer stages for FAM133B

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_573833	chr7_92573265_-	0.0396888470202118	0.475367366031418
STAD	pathologic_stage	CAediting_573832	chr7_92573260_-	0.0047845668499692	0.362463444652138

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Relation with survival for FAM133B

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for FAM133B

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for FAM133B

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene