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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: KANK3 (CAeditome ID:256949)

Gene summary for KANK3

check button Gene summary
Gene informationGene symbol

KANK3

Gene ID

256949

Gene nameKN motif and ankyrin repeat domains 3
SynonymsANKRD47
Cytomap

19p13.2

Type of geneprotein-coding
DescriptionKN motif and ankyrin repeat domain-containing protein 3ankyrin repeat domain 47ankyrin repeat domain-containing protein 47kidney ankyrin repeat-containing protein 3
Modification date20210518
UniProtAcc

Q6NY19

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for KANK3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000186994.10

check button RNA A-to-I editing events in Cancer.
CAediting_1286223(8323520, -), CAediting_1286224(8325362, -), CAediting_1286225(8325365, -), CAediting_1286226(8325436, -), CAediting_1286227(8325455, -), CAediting_1286228(8325500, -), CAediting_1286229(8325510, -), CAediting_1286230(8326174, -), CAediting_1286231(8326329, -), CAediting_1286232(8327299, -), CAediting_1286233(8328061, -), CAediting_1286234(8328980, -), CAediting_1286235(8330938, -), CAediting_1286236(8331026, -), CAediting_1286237(8332067, -), CAediting_1286238(8332079, -), CAediting_1286239(8332540, -), CAediting_1286240(8336169, -), CAediting_1286241(8336190, -), CAediting_1286242(8336191, -), CAediting_1286243(8336192, -), CAediting_1286244(8336244, -), CAediting_1286245(8336253, -), CAediting_1286246(8336256, -), CAediting_1286247(8336270, -), CAediting_1286248(8336273, -), CAediting_1286249(8336288, -), CAediting_1286250(8336292, -), CAediting_1286251(8336315, -), CAediting_1286252(8336325, -), CAediting_1286253(8336337, -), CAediting_1286254(8336354, -), CAediting_1286255(8336355, -), CAediting_1286256(8336361, -), CAediting_1286257(8336373, -), CAediting_1286258(8336374, -), CAediting_1286259(8336432, -), CAediting_1286260(8336481, -), CAediting_1286261(8336492, -), CAediting_1286262(8336493, -), CAediting_1286263(8336511, -), CAediting_1286264(8336519, -), CAediting_1286265(8336645, -), CAediting_1286266(8336718, -), CAediting_1286267(8336726, -), CAediting_1286268(8336734, -), CAediting_1286269(8337062, -), CAediting_1286270(8337063, -), CAediting_1286271(8337068, -), CAediting_1286272(8337071, -), CAediting_1286273(8337088, -), CAediting_1286274(8337090, -), CAediting_1286275(8337100, -), CAediting_1286276(8337101, -), CAediting_1286277(8337108, -), CAediting_1286278(8337109, -), CAediting_1286279(8337118, -), CAediting_1286280(8337122, -), CAediting_1286281(8337129, -), CAediting_1286282(8337315, -), CAediting_1286283(8337332, -), CAediting_1286284(8337336, -), CAediting_1286285(8337342, -), CAediting_1286286(8337366, -), CAediting_1286287(8337385, -), CAediting_1286288(8337421, -), CAediting_1286289(8337468, -), CAediting_1286290(8337473, -), CAediting_1286291(8337474, -), CAediting_1286292(8337482, -), CAediting_1286293(8337510, -), CAediting_1286294(8337528, -), CAediting_1286295(8337539, -), CAediting_1286296(8337540, -), CAediting_1286297(8337583, -), CAediting_1286298(8337618, -), CAediting_1286299(8337619, -), CAediting_1286300(8337627, -), CAediting_1286301(8338097, -), CAediting_1286302(8338118, -), CAediting_1286303(8338124, -), CAediting_1286304(8338159, -), CAediting_1286305(8338160, -), CAediting_1286306(8338226, -), CAediting_1286307(8338249, -), CAediting_1286308(8338294, -), CAediting_1286309(8338295, -), CAediting_1286310(8338297, -), CAediting_1286311(8338317, -), CAediting_1286312(8339305, -), CAediting_1286313(8339312, -), CAediting_1286314(8339484, -), CAediting_1286315(8339497, -), CAediting_1286316(8339815, -), CAediting_1286317(8339816, -), CAediting_1286318(8339820, -), CAediting_1286319(8339852, -), CAediting_1286320(8339864, -), CAediting_1286321(8339882, -), CAediting_1286322(8339902, -), CAediting_1286323(8339912, -), CAediting_1286324(8340150, -), CAediting_1286325(8340210, -), CAediting_1286326(8341326, -), CAediting_1286327(8341346, -), CAediting_1286328(8341363, -), CAediting_1286329(8341507, -), CAediting_1286330(8341593, -), CAediting_1286331(8342079, -), CAediting_1286332(8342109, -), CAediting_1286333(8342197, -),

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RNA editing positional annotations for KANK3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1286223chr19_8323520_-exonic
CAediting_1286224chr19_8325362_-intronic
CAediting_1286225chr19_8325365_-intronic
CAediting_1286226chr19_8325436_-intronic
CAediting_1286227chr19_8325455_-intronic
CAediting_1286228chr19_8325500_-intronic
CAediting_1286229chr19_8325510_-intronic
CAediting_1286230chr19_8326174_-intronic
CAediting_1286231chr19_8326329_-intronic
CAediting_1286232chr19_8327299_-intronic
CAediting_1286233chr19_8328061_-intronic
CAediting_1286234chr19_8328980_-intronic
CAediting_1286235chr19_8330938_-intronic
CAediting_1286236chr19_8331026_-intronic
CAediting_1286237chr19_8332067_-intronic
CAediting_1286238chr19_8332079_-intronic
CAediting_1286239chr19_8332540_-intronic
CAediting_1286240chr19_8336169_-intronic
CAediting_1286241chr19_8336190_-intronic
CAediting_1286242chr19_8336191_-intronic
CAediting_1286243chr19_8336192_-intronic
CAediting_1286244chr19_8336244_-intronic
CAediting_1286245chr19_8336253_-intronic
CAediting_1286246chr19_8336256_-intronic
CAediting_1286247chr19_8336270_-intronic
CAediting_1286248chr19_8336273_-intronic
CAediting_1286249chr19_8336288_-intronic
CAediting_1286250chr19_8336292_-intronic
CAediting_1286251chr19_8336315_-intronic
CAediting_1286252chr19_8336325_-intronic
CAediting_1286253chr19_8336337_-intronic
CAediting_1286254chr19_8336354_-intronic
CAediting_1286255chr19_8336355_-intronic
CAediting_1286256chr19_8336361_-intronic
CAediting_1286257chr19_8336373_-intronic
CAediting_1286258chr19_8336374_-intronic
CAediting_1286259chr19_8336432_-intronic
CAediting_1286260chr19_8336481_-intronic
CAediting_1286261chr19_8336492_-intronic
CAediting_1286262chr19_8336493_-intronic
CAediting_1286263chr19_8336511_-intronic
CAediting_1286264chr19_8336519_-intronic
CAediting_1286265chr19_8336645_-intronic
CAediting_1286266chr19_8336718_-intronic
CAediting_1286267chr19_8336726_-intronic
CAediting_1286268chr19_8336734_-intronic
CAediting_1286269chr19_8337062_-intronic
CAediting_1286270chr19_8337063_-intronic
CAediting_1286271chr19_8337068_-intronic
CAediting_1286272chr19_8337071_-intronic
CAediting_1286273chr19_8337088_-intronic
CAediting_1286274chr19_8337090_-intronic
CAediting_1286275chr19_8337100_-intronic
CAediting_1286276chr19_8337101_-intronic
CAediting_1286277chr19_8337108_-intronic
CAediting_1286278chr19_8337109_-intronic
CAediting_1286279chr19_8337118_-intronic
CAediting_1286280chr19_8337122_-intronic
CAediting_1286281chr19_8337129_-intronic
CAediting_1286282chr19_8337315_-intronic
CAediting_1286283chr19_8337332_-intronic
CAediting_1286284chr19_8337336_-intronic
CAediting_1286285chr19_8337342_-intronic
CAediting_1286286chr19_8337366_-intronic
CAediting_1286287chr19_8337385_-intronic
CAediting_1286288chr19_8337421_-intronic
CAediting_1286289chr19_8337468_-intronic
CAediting_1286290chr19_8337473_-intronic
CAediting_1286291chr19_8337474_-intronic
CAediting_1286292chr19_8337482_-intronic
CAediting_1286293chr19_8337510_-intronic
CAediting_1286294chr19_8337528_-intronic
CAediting_1286295chr19_8337539_-intronic
CAediting_1286296chr19_8337540_-intronic
CAediting_1286297chr19_8337583_-intronic
CAediting_1286298chr19_8337618_-intronic
CAediting_1286299chr19_8337619_-intronic
CAediting_1286300chr19_8337627_-intronic
CAediting_1286301chr19_8338097_-intronic
CAediting_1286302chr19_8338118_-intronic
CAediting_1286303chr19_8338124_-intronic
CAediting_1286304chr19_8338159_-intronic
CAediting_1286305chr19_8338160_-intronic
CAediting_1286306chr19_8338226_-intronic
CAediting_1286307chr19_8338249_-intronic
CAediting_1286308chr19_8338294_-intronic
CAediting_1286309chr19_8338295_-intronic
CAediting_1286310chr19_8338297_-intronic
CAediting_1286311chr19_8338317_-intronic
CAediting_1286312chr19_8339305_-intronic
CAediting_1286313chr19_8339312_-intronic
CAediting_1286314chr19_8339484_-intronic
CAediting_1286315chr19_8339497_-intronic
CAediting_1286316chr19_8339815_-intronic
CAediting_1286317chr19_8339816_-intronic
CAediting_1286318chr19_8339820_-intronic
CAediting_1286319chr19_8339852_-intronic
CAediting_1286320chr19_8339864_-intronic
CAediting_1286321chr19_8339882_-intronic
CAediting_1286322chr19_8339902_-intronic
CAediting_1286323chr19_8339912_-intronic
CAediting_1286324chr19_8340150_-intronic
CAediting_1286325chr19_8340210_-intronic
CAediting_1286326chr19_8341326_-intronic
CAediting_1286327chr19_8341346_-intronic
CAediting_1286328chr19_8341363_-intronic
CAediting_1286329chr19_8341507_-intronic
CAediting_1286330chr19_8341593_-intronic
CAediting_1286331chr19_8342079_-intronic
CAediting_1286332chr19_8342109_-intronic
CAediting_1286333chr19_8342197_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1286223chr19_8323520_-SINEAluAluJo
CAediting_1286224chr19_8325362_-SINEAluAluSz
CAediting_1286225chr19_8325365_-SINEAluAluSz
CAediting_1286226chr19_8325436_-SINEAluAluSz
CAediting_1286227chr19_8325455_-SINEAluAluSz
CAediting_1286228chr19_8325500_-SINEAluAluSz
CAediting_1286229chr19_8325510_-SINEAluAluSz
CAediting_1286230chr19_8326174_-SINEAluAluSx1
CAediting_1286231chr19_8326329_-SINEAluAluSx1
CAediting_1286232chr19_8327299_-SINEAluAluJr
CAediting_1286233chr19_8328061_-SINEAluAluJo
CAediting_1286234chr19_8328980_-SINEAluAluY
CAediting_1286235chr19_8330938_-SINEAluAluSx1
CAediting_1286236chr19_8331026_-SINEAluAluSx1
CAediting_1286237chr19_8332067_-SINEAluAluSx1
CAediting_1286238chr19_8332079_-SINEAluAluSx1
CAediting_1286239chr19_8332540_-SINEAluAluSc
CAediting_1286240chr19_8336169_-SINEAluAluSx
CAediting_1286241chr19_8336190_-SINEAluAluSx
CAediting_1286242chr19_8336191_-SINEAluAluSx
CAediting_1286243chr19_8336192_-SINEAluAluSx
CAediting_1286244chr19_8336244_-SINEAluAluSx
CAediting_1286245chr19_8336253_-SINEAluAluSx
CAediting_1286246chr19_8336256_-SINEAluAluSx
CAediting_1286247chr19_8336270_-SINEAluAluSx
CAediting_1286248chr19_8336273_-SINEAluAluSx
CAediting_1286249chr19_8336288_-SINEAluAluSx
CAediting_1286250chr19_8336292_-SINEAluAluSx
CAediting_1286251chr19_8336315_-SINEAluAluSx
CAediting_1286252chr19_8336325_-SINEAluAluSx
CAediting_1286253chr19_8336337_-SINEAluAluSx
CAediting_1286254chr19_8336354_-SINEAluAluSx
CAediting_1286255chr19_8336355_-SINEAluAluSx
CAediting_1286256chr19_8336361_-SINEAluAluSx
CAediting_1286257chr19_8336373_-SINEAluAluSx
CAediting_1286258chr19_8336374_-SINEAluAluSx
CAediting_1286259chr19_8336432_-SINEAluAluSx
CAediting_1286260chr19_8336481_-SINEAluAluJb
CAediting_1286261chr19_8336492_-SINEAluAluJb
CAediting_1286262chr19_8336493_-SINEAluAluJb
CAediting_1286263chr19_8336511_-SINEAluAluJb
CAediting_1286264chr19_8336519_-SINEAluAluJb
CAediting_1286265chr19_8336645_-SINEAluAluJb
CAediting_1286266chr19_8336718_-SINEAluAluJb
CAediting_1286267chr19_8336726_-SINEAluAluJb
CAediting_1286268chr19_8336734_-SINEAluAluJb
CAediting_1286269chr19_8337062_-SINEAluAluSz
CAediting_1286270chr19_8337063_-SINEAluAluSz
CAediting_1286271chr19_8337068_-SINEAluAluSz
CAediting_1286272chr19_8337071_-SINEAluAluSz
CAediting_1286273chr19_8337088_-SINEAluAluSz
CAediting_1286274chr19_8337090_-SINEAluAluSz
CAediting_1286275chr19_8337100_-SINEAluAluSz
CAediting_1286276chr19_8337101_-SINEAluAluSz
CAediting_1286277chr19_8337108_-SINEAluAluSz
CAediting_1286278chr19_8337109_-SINEAluAluSz
CAediting_1286279chr19_8337118_-SINEAluAluSz
CAediting_1286280chr19_8337122_-SINEAluAluSz
CAediting_1286281chr19_8337129_-SINEAluAluSz
CAediting_1286282chr19_8337315_-SINEAluAluY
CAediting_1286283chr19_8337332_-SINEAluAluY
CAediting_1286284chr19_8337336_-SINEAluAluY
CAediting_1286285chr19_8337342_-SINEAluAluY
CAediting_1286286chr19_8337366_-SINEAluAluY
CAediting_1286287chr19_8337385_-SINEAluAluY
CAediting_1286288chr19_8337421_-SINEAluAluY
CAediting_1286289chr19_8337468_-SINEAluAluY
CAediting_1286290chr19_8337473_-SINEAluAluY
CAediting_1286291chr19_8337474_-SINEAluAluY
CAediting_1286292chr19_8337482_-SINEAluAluY
CAediting_1286293chr19_8337510_-SINEAluAluSz
CAediting_1286294chr19_8337528_-SINEAluAluSz
CAediting_1286295chr19_8337539_-SINEAluAluSz
CAediting_1286296chr19_8337540_-SINEAluAluSz
CAediting_1286297chr19_8337583_-SINEAluAluSz
CAediting_1286298chr19_8337618_-SINEAluAluSz
CAediting_1286299chr19_8337619_-SINEAluAluSz
CAediting_1286300chr19_8337627_-SINEAluAluSz
CAediting_1286301chr19_8338097_-SINEAluAluSx1
CAediting_1286302chr19_8338118_-SINEAluAluSx1
CAediting_1286303chr19_8338124_-SINEAluAluSx1
CAediting_1286304chr19_8338159_-SINEAluAluSx1
CAediting_1286305chr19_8338160_-SINEAluAluSx1
CAediting_1286306chr19_8338226_-SINEAluAluSx1
CAediting_1286307chr19_8338249_-SINEAluAluSx1
CAediting_1286308chr19_8338294_-SINEAluAluSx1
CAediting_1286309chr19_8338295_-SINEAluAluSx1
CAediting_1286310chr19_8338297_-SINEAluAluSx1
CAediting_1286311chr19_8338317_-SINEAluAluSx1
CAediting_1286312chr19_8339305_-SINEAluAluJo
CAediting_1286313chr19_8339312_-SINEAluAluJo
CAediting_1286314chr19_8339484_-SINEAluAluSq
CAediting_1286315chr19_8339497_-SINEAluAluSq
CAediting_1286316chr19_8339815_-SINEAluAluJo
CAediting_1286317chr19_8339816_-SINEAluAluJo
CAediting_1286318chr19_8339820_-SINEAluAluJo
CAediting_1286319chr19_8339852_-SINEAluAluJo
CAediting_1286320chr19_8339864_-SINEAluAluJo
CAediting_1286321chr19_8339882_-SINEAluAluJo
CAediting_1286322chr19_8339902_-SINEAluAluJo
CAediting_1286323chr19_8339912_-SINEAluAluJo
CAediting_1286324chr19_8340150_-SINEAluAluSx3
CAediting_1286325chr19_8340210_-SINEAluAluSx3
CAediting_1286326chr19_8341326_-SINEAluAluJo
CAediting_1286327chr19_8341346_-SINEAluAluJo
CAediting_1286328chr19_8341363_-SINEAluAluJo
CAediting_1286329chr19_8341507_-SINEAluAluSx
CAediting_1286330chr19_8341593_-SINEAluAluSx
CAediting_1286331chr19_8342079_-SINEAluAluSz
CAediting_1286332chr19_8342109_-SINEAluAluSz
CAediting_1286333chr19_8342197_-SINEAluAluSz

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RNA A-to-I editing events in the alternative splicing sites for KANK3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000186994.10.KANK3.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000186994.10.KANK3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for KANK3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for KANK3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for KANK3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_86358chr1_109598906_+ENSG00000186994.10ENST00000330915hsa-miR-197-5p832262283226298mer-1a83226228322645153-24.63
CAediting_604450chr7_133034877_-ENSG00000186994.10ENST00000610351hsa-miR-3654833290183329088mer-1a83329018332918148-17.79

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for KANK3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for KANK3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for KANK3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for KANK3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for KANK3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for KANK3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource