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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: GABPB1 (CAeditome ID:2553)

Gene summary for GABPB1

check button Gene summary
Gene informationGene symbol

GABPB1

Gene ID

2553

Gene nameGA binding protein transcription factor subunit beta 1
SynonymsBABPB2|E4TF1|E4TF1-47|E4TF1-53|E4TF1B|GABPB|GABPB-1|GABPB2|NRF2B1|NRF2B2
Cytomap

15q21.2

Type of geneprotein-coding
DescriptionGA-binding protein subunit beta-1GA binding protein transcription factor beta subunit 1 transcript variant gamma-2GABP subunit beta-2nuclear respiratory factor 2transcription factor E4TF1-47transcription factor E4TF1-53
Modification date20210518
UniProtAcc

Q06547

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
GABPB1

GO:0045944

GA-binding protein subunit beta-1

9857059

GABPB1

GO:0000976

GA-binding protein subunit beta-1

9857059

GABPB1

GO:0005634

GA-binding protein subunit beta-1

9857059

GABPB1

GO:0005654

GA-binding protein subunit beta-1

0000052

GABPB1

GO:0036464

GA-binding protein subunit beta-1

0000052


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RNA A-to-I events for GABPB1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000104064.15
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1038724(50280494, -), CAediting_1038725(50281241, -), CAediting_1038726(50281242, -), CAediting_1038727(50282138, -), CAediting_1038728(50282148, -), CAediting_1038729(50282194, -), CAediting_1038730(50283045, -), CAediting_1038731(50283607, -), CAediting_1038732(50283791, -), CAediting_1038733(50289827, -), CAediting_1038734(50289882, -), CAediting_1038735(50289916, -), CAediting_1038736(50289920, -), CAediting_1038737(50289946, -), CAediting_1038738(50289968, -), CAediting_1038739(50289982, -), CAediting_1038740(50290015, -), CAediting_1038741(50290419, -), CAediting_1038742(50290425, -), CAediting_1038743(50290434, -), CAediting_1038744(50290509, -), CAediting_1038745(50290560, -), CAediting_1038746(50291434, -), CAediting_1038747(50296978, -), CAediting_1038748(50296979, -), CAediting_1038749(50297075, -), CAediting_1038750(50297130, -), CAediting_1038751(50297435, -), CAediting_1038752(50297487, -), CAediting_1038753(50298189, -), CAediting_1038754(50300539, -), CAediting_1038755(50300551, -), CAediting_1038756(50300604, -), CAediting_1038757(50300624, -), CAediting_1038758(50305490, -), CAediting_1038759(50310722, -), CAediting_1038760(50322809, -), CAediting_1038761(50323744, -), CAediting_1038762(50323804, -), CAediting_1038763(50323980, -), CAediting_1038764(50323992, -), CAediting_1038765(50323997, -), CAediting_1038766(50324030, -), CAediting_1038767(50324170, -), CAediting_1038768(50324612, -), CAediting_1038769(50324617, -), CAediting_1038770(50324641, -), CAediting_1038771(50324656, -), CAediting_1038772(50324666, -), CAediting_1038773(50324682, -), CAediting_1038774(50324683, -), CAediting_1038775(50324709, -), CAediting_1038776(50324714, -), CAediting_1038777(50324717, -), CAediting_1038778(50324720, -), CAediting_1038779(50324755, -), CAediting_1038780(50324826, -), CAediting_1038781(50325670, -), CAediting_1038782(50325803, -), CAediting_1038783(50325804, -), CAediting_1038784(50329969, -), CAediting_1038785(50330009, -), CAediting_1038786(50330045, -), CAediting_1038787(50330071, -), CAediting_1038788(50330176, -), CAediting_1038789(50330177, -), CAediting_1038790(50331967, -), CAediting_1038791(50331971, -), CAediting_1038792(50331972, -), CAediting_1038793(50332121, -), CAediting_1038794(50332147, -), CAediting_1038795(50332150, -), CAediting_1038796(50333236, -), CAediting_1038797(50333498, -), CAediting_1038798(50333866, -), CAediting_1038799(50333930, -), CAediting_1038800(50334526, -), CAediting_1038801(50334562, -), CAediting_1038802(50334576, -), CAediting_1038803(50334586, -), CAediting_1038804(50334591, -), CAediting_1038805(50334592, -), CAediting_1038806(50334596, -), CAediting_1038807(50334600, -), CAediting_1038808(50334605, -), CAediting_1038809(50334610, -), CAediting_1038810(50334629, -), CAediting_1038811(50334646, -), CAediting_1038812(50334652, -), CAediting_1038813(50334656, -), CAediting_1038814(50334672, -), CAediting_1038815(50334675, -), CAediting_1038816(50334683, -), CAediting_1038817(50334685, -), CAediting_1038818(50334703, -), CAediting_1038819(50334704, -), CAediting_1038820(50334713, -), CAediting_1038821(50335784, -), CAediting_1038822(50336225, -), CAediting_1038823(50336237, -), CAediting_1038824(50336561, -), CAediting_1038825(50336571, -), CAediting_1038826(50336600, -), CAediting_1038827(50336977, -), CAediting_1038828(50337591, -), CAediting_1038829(50337666, -), CAediting_1038830(50338602, -), CAediting_1038831(50338612, -), CAediting_1038832(50338638, -), CAediting_1038833(50338668, -), CAediting_1038834(50338669, -), CAediting_1038835(50338707, -), CAediting_1038836(50339277, -), CAediting_1038837(50344738, -), CAediting_1038838(50344755, -), CAediting_1038839(50344781, -), CAediting_1038840(50345392, -), CAediting_1038841(50345393, -), CAediting_1038842(50345399, -), CAediting_1038843(50345410, -), CAediting_1038844(50345418, -), CAediting_1038845(50345445, -), CAediting_1038846(50345467, -), CAediting_1038847(50345472, -), CAediting_1038848(50345554, -), CAediting_1038849(50345558, -), CAediting_1038850(50345840, -), CAediting_1038851(50345876, -), CAediting_1038852(50346886, -), CAediting_1038853(50346887, -), CAediting_1038854(50346938, -), CAediting_1038855(50346944, -), CAediting_1038856(50346954, -), CAediting_1038857(50346957, -), CAediting_1038858(50346958, -), CAediting_1038859(50346959, -), CAediting_1038860(50346960, -), CAediting_1038861(50346961, -), CAediting_1038862(50346963, -), CAediting_1038863(50346972, -), CAediting_1038864(50346978, -), CAediting_1038865(50346983, -), CAediting_1038866(50346985, -), CAediting_1038867(50346993, -), CAediting_1038868(50346994, -), CAediting_1038869(50347017, -), CAediting_1038870(50347060, -), CAediting_1038871(50347061, -), CAediting_1038872(50347069, -), CAediting_1038873(50347799, -), CAediting_1038874(50347838, -), CAediting_1038875(50347877, -), CAediting_1038876(50347886, -), CAediting_1038877(50347888, -), CAediting_1038878(50347890, -), CAediting_1038879(50347938, -), CAediting_1038880(50347944, -), CAediting_1038881(50347947, -), CAediting_1038882(50347986, -), CAediting_1038883(50348029, -), CAediting_1038884(50348284, -), CAediting_1038885(50348285, -), CAediting_1038886(50348327, -), CAediting_1038887(50348338, -), CAediting_1038888(50348352, -), CAediting_1038889(50348360, -), CAediting_1038890(50348383, -), CAediting_1038891(50348411, -), CAediting_1038892(50348415, -), CAediting_1038893(50348424, -), CAediting_1038894(50348433, -), CAediting_1038895(50348445, -), CAediting_1038896(50348523, -), CAediting_1038897(50348607, -), CAediting_1038898(50348650, -), CAediting_1038899(50348682, -), CAediting_1038900(50348693, -), CAediting_1038901(50348699, -), CAediting_1038902(50348762, -), CAediting_1038903(50348818, -), CAediting_1038904(50348829, -), CAediting_1038905(50351320, -), CAediting_1038906(50351332, -), CAediting_1038907(50351333, -), CAediting_1038908(50351346, -), CAediting_1038909(50351359, -), CAediting_1038910(50351371, -), CAediting_1038911(50351372, -), CAediting_1038912(50351373, -), CAediting_1038913(50351396, -), CAediting_1038914(50351401, -), CAediting_1038915(50351403, -), CAediting_1038916(50351406, -), CAediting_1038917(50351408, -), CAediting_1038918(50351420, -), CAediting_1038919(50351427, -), CAediting_1038920(50351441, -), CAediting_1038921(50351452, -), CAediting_1038922(50351457, -), CAediting_1038923(50351464, -), CAediting_1038924(50351476, -), CAediting_1038925(50351516, -), CAediting_1038926(50351517, -), CAediting_1038927(50351552, -), CAediting_1038928(50351556, -), CAediting_1038929(50352373, -), CAediting_1038930(50352387, -), CAediting_1038931(50352403, -), CAediting_1038932(50352407, -), CAediting_1038933(50352408, -), CAediting_1038934(50352428, -), CAediting_1038935(50352446, -), CAediting_1038936(50352463, -), CAediting_1038937(50352467, -), CAediting_1038938(50352472, -), CAediting_1038939(50352473, -), CAediting_1038940(50352499, -), CAediting_1038941(50352502, -), CAediting_1038942(50352503, -), CAediting_1038943(50352504, -), CAediting_1038944(50352505, -), CAediting_1038945(50352506, -), CAediting_1038946(50352512, -), CAediting_1038947(50352513, -), CAediting_1038948(50352518, -), CAediting_1038949(50352524, -), CAediting_1038950(50352530, -), CAediting_1038951(50352539, -), CAediting_1038952(50352562, -), CAediting_1038953(50352563, -), CAediting_1038954(50352568, -), CAediting_1038955(50352573, -), CAediting_1038956(50352627, -), CAediting_1038957(50353052, -),

Top

RNA editing positional annotations for GABPB1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1038724chr15_50280494_-intronic
CAediting_1038725chr15_50281241_-intronic
CAediting_1038726chr15_50281242_-intronic
CAediting_1038727chr15_50282138_-intronic
CAediting_1038728chr15_50282148_-intronic
CAediting_1038729chr15_50282194_-intronic
CAediting_1038730chr15_50283045_-intronic
CAediting_1038731chr15_50283607_-intronic
CAediting_1038732chr15_50283791_-intronic
CAediting_1038733chr15_50289827_-intronic
CAediting_1038734chr15_50289882_-intronic
CAediting_1038735chr15_50289916_-intronic
CAediting_1038736chr15_50289920_-intronic
CAediting_1038737chr15_50289946_-intronic
CAediting_1038738chr15_50289968_-intronic
CAediting_1038739chr15_50289982_-intronic
CAediting_1038740chr15_50290015_-intronic
CAediting_1038741chr15_50290419_-intronic
CAediting_1038742chr15_50290425_-intronic
CAediting_1038743chr15_50290434_-intronic
CAediting_1038744chr15_50290509_-intronic
CAediting_1038745chr15_50290560_-intronic
CAediting_1038746chr15_50291434_-intronic
CAediting_1038747chr15_50296978_-intronic
CAediting_1038748chr15_50296979_-intronic
CAediting_1038749chr15_50297075_-intronic
CAediting_1038750chr15_50297130_-intronic
CAediting_1038751chr15_50297435_-intronic
CAediting_1038752chr15_50297487_-intronic
CAediting_1038753chr15_50298189_-intronic
CAediting_1038754chr15_50300539_-intronic
CAediting_1038755chr15_50300551_-intronic
CAediting_1038756chr15_50300604_-intronic
CAediting_1038757chr15_50300624_-intronic
CAediting_1038758chr15_50305490_-intronic
CAediting_1038759chr15_50310722_-intronic
CAediting_1038760chr15_50322809_-intronic
CAediting_1038761chr15_50323744_-intronic
CAediting_1038762chr15_50323804_-intronic
CAediting_1038763chr15_50323980_-intronic
CAediting_1038764chr15_50323992_-intronic
CAediting_1038765chr15_50323997_-intronic
CAediting_1038766chr15_50324030_-intronic
CAediting_1038767chr15_50324170_-intronic
CAediting_1038768chr15_50324612_-intronic
CAediting_1038769chr15_50324617_-intronic
CAediting_1038770chr15_50324641_-intronic
CAediting_1038771chr15_50324656_-intronic
CAediting_1038772chr15_50324666_-intronic
CAediting_1038773chr15_50324682_-intronic
CAediting_1038774chr15_50324683_-intronic
CAediting_1038775chr15_50324709_-intronic
CAediting_1038776chr15_50324714_-intronic
CAediting_1038777chr15_50324717_-intronic
CAediting_1038778chr15_50324720_-intronic
CAediting_1038779chr15_50324755_-intronic
CAediting_1038780chr15_50324826_-intronic
CAediting_1038781chr15_50325670_-intronic
CAediting_1038782chr15_50325803_-intronic
CAediting_1038783chr15_50325804_-intronic
CAediting_1038784chr15_50329969_-intronic
CAediting_1038785chr15_50330009_-intronic
CAediting_1038786chr15_50330045_-intronic
CAediting_1038787chr15_50330071_-intronic
CAediting_1038788chr15_50330176_-intronic
CAediting_1038789chr15_50330177_-intronic
CAediting_1038790chr15_50331967_-intronic
CAediting_1038791chr15_50331971_-intronic
CAediting_1038792chr15_50331972_-intronic
CAediting_1038793chr15_50332121_-intronic
CAediting_1038794chr15_50332147_-intronic
CAediting_1038795chr15_50332150_-intronic
CAediting_1038796chr15_50333236_-intronic
CAediting_1038797chr15_50333498_-intronic
CAediting_1038798chr15_50333866_-intronic
CAediting_1038799chr15_50333930_-intronic
CAediting_1038800chr15_50334526_-intronic
CAediting_1038801chr15_50334562_-intronic
CAediting_1038802chr15_50334576_-intronic
CAediting_1038803chr15_50334586_-intronic
CAediting_1038804chr15_50334591_-intronic
CAediting_1038805chr15_50334592_-intronic
CAediting_1038806chr15_50334596_-intronic
CAediting_1038807chr15_50334600_-intronic
CAediting_1038808chr15_50334605_-intronic
CAediting_1038809chr15_50334610_-intronic
CAediting_1038810chr15_50334629_-intronic
CAediting_1038811chr15_50334646_-intronic
CAediting_1038812chr15_50334652_-intronic
CAediting_1038813chr15_50334656_-intronic
CAediting_1038814chr15_50334672_-intronic
CAediting_1038815chr15_50334675_-intronic
CAediting_1038816chr15_50334683_-intronic
CAediting_1038817chr15_50334685_-intronic
CAediting_1038818chr15_50334703_-intronic
CAediting_1038819chr15_50334704_-intronic
CAediting_1038820chr15_50334713_-intronic
CAediting_1038821chr15_50335784_-intronic
CAediting_1038822chr15_50336225_-intronic
CAediting_1038823chr15_50336237_-intronic
CAediting_1038824chr15_50336561_-intronic
CAediting_1038825chr15_50336571_-intronic
CAediting_1038826chr15_50336600_-intronic
CAediting_1038827chr15_50336977_-intronic
CAediting_1038828chr15_50337591_-intronic
CAediting_1038829chr15_50337666_-intronic
CAediting_1038830chr15_50338602_-intronic
CAediting_1038831chr15_50338612_-intronic
CAediting_1038832chr15_50338638_-intronic
CAediting_1038833chr15_50338668_-intronic
CAediting_1038834chr15_50338669_-intronic
CAediting_1038835chr15_50338707_-intronic
CAediting_1038836chr15_50339277_-intronic
CAediting_1038837chr15_50344738_-intronic
CAediting_1038838chr15_50344755_-intronic
CAediting_1038839chr15_50344781_-intronic
CAediting_1038840chr15_50345392_-intronic
CAediting_1038841chr15_50345393_-intronic
CAediting_1038842chr15_50345399_-intronic
CAediting_1038843chr15_50345410_-intronic
CAediting_1038844chr15_50345418_-intronic
CAediting_1038845chr15_50345445_-intronic
CAediting_1038846chr15_50345467_-intronic
CAediting_1038847chr15_50345472_-intronic
CAediting_1038848chr15_50345554_-intronic
CAediting_1038849chr15_50345558_-intronic
CAediting_1038850chr15_50345840_-intronic
CAediting_1038851chr15_50345876_-intronic
CAediting_1038852chr15_50346886_-intronic
CAediting_1038853chr15_50346887_-intronic
CAediting_1038854chr15_50346938_-intronic
CAediting_1038855chr15_50346944_-intronic
CAediting_1038856chr15_50346954_-intronic
CAediting_1038857chr15_50346957_-intronic
CAediting_1038858chr15_50346958_-intronic
CAediting_1038859chr15_50346959_-intronic
CAediting_1038860chr15_50346960_-intronic
CAediting_1038861chr15_50346961_-intronic
CAediting_1038862chr15_50346963_-intronic
CAediting_1038863chr15_50346972_-intronic
CAediting_1038864chr15_50346978_-intronic
CAediting_1038865chr15_50346983_-intronic
CAediting_1038866chr15_50346985_-intronic
CAediting_1038867chr15_50346993_-intronic
CAediting_1038868chr15_50346994_-intronic
CAediting_1038869chr15_50347017_-intronic
CAediting_1038870chr15_50347060_-intronic
CAediting_1038871chr15_50347061_-intronic
CAediting_1038872chr15_50347069_-intronic
CAediting_1038873chr15_50347799_-intronic
CAediting_1038874chr15_50347838_-intronic
CAediting_1038875chr15_50347877_-intronic
CAediting_1038876chr15_50347886_-intronic
CAediting_1038877chr15_50347888_-intronic
CAediting_1038878chr15_50347890_-intronic
CAediting_1038879chr15_50347938_-intronic
CAediting_1038880chr15_50347944_-intronic
CAediting_1038881chr15_50347947_-intronic
CAediting_1038882chr15_50347986_-intronic
CAediting_1038883chr15_50348029_-intronic
CAediting_1038884chr15_50348284_-intronic
CAediting_1038885chr15_50348285_-intronic
CAediting_1038886chr15_50348327_-intronic
CAediting_1038887chr15_50348338_-intronic
CAediting_1038888chr15_50348352_-intronic
CAediting_1038889chr15_50348360_-intronic
CAediting_1038890chr15_50348383_-intronic
CAediting_1038891chr15_50348411_-intronic
CAediting_1038892chr15_50348415_-intronic
CAediting_1038893chr15_50348424_-intronic
CAediting_1038894chr15_50348433_-intronic
CAediting_1038895chr15_50348445_-intronic
CAediting_1038896chr15_50348523_-intronic
CAediting_1038897chr15_50348607_-intronic
CAediting_1038898chr15_50348650_-intronic
CAediting_1038899chr15_50348682_-intronic
CAediting_1038900chr15_50348693_-intronic
CAediting_1038901chr15_50348699_-intronic
CAediting_1038902chr15_50348762_-intronic
CAediting_1038903chr15_50348818_-intronic
CAediting_1038904chr15_50348829_-intronic
CAediting_1038905chr15_50351320_-ncRNA_exonic
CAediting_1038906chr15_50351332_-ncRNA_exonic
CAediting_1038907chr15_50351333_-ncRNA_exonic
CAediting_1038908chr15_50351346_-ncRNA_exonic
CAediting_1038909chr15_50351359_-ncRNA_exonic
CAediting_1038910chr15_50351371_-ncRNA_exonic
CAediting_1038911chr15_50351372_-ncRNA_exonic
CAediting_1038912chr15_50351373_-ncRNA_exonic
CAediting_1038913chr15_50351396_-ncRNA_exonic
CAediting_1038914chr15_50351401_-ncRNA_exonic
CAediting_1038915chr15_50351403_-ncRNA_exonic
CAediting_1038916chr15_50351406_-ncRNA_exonic
CAediting_1038917chr15_50351408_-ncRNA_exonic
CAediting_1038918chr15_50351420_-ncRNA_exonic
CAediting_1038919chr15_50351427_-ncRNA_exonic
CAediting_1038920chr15_50351441_-ncRNA_exonic
CAediting_1038921chr15_50351452_-ncRNA_exonic
CAediting_1038922chr15_50351457_-ncRNA_exonic
CAediting_1038923chr15_50351464_-ncRNA_exonic
CAediting_1038924chr15_50351476_-ncRNA_exonic
CAediting_1038925chr15_50351516_-ncRNA_exonic
CAediting_1038926chr15_50351517_-ncRNA_exonic
CAediting_1038927chr15_50351552_-ncRNA_exonic
CAediting_1038928chr15_50351556_-ncRNA_exonic
CAediting_1038929chr15_50352373_-ncRNA_exonic
CAediting_1038930chr15_50352387_-ncRNA_exonic
CAediting_1038931chr15_50352403_-ncRNA_exonic
CAediting_1038932chr15_50352407_-ncRNA_exonic
CAediting_1038933chr15_50352408_-ncRNA_exonic
CAediting_1038934chr15_50352428_-ncRNA_exonic
CAediting_1038935chr15_50352446_-ncRNA_exonic
CAediting_1038936chr15_50352463_-ncRNA_exonic
CAediting_1038937chr15_50352467_-ncRNA_exonic
CAediting_1038938chr15_50352472_-ncRNA_exonic
CAediting_1038939chr15_50352473_-ncRNA_exonic
CAediting_1038940chr15_50352499_-ncRNA_exonic
CAediting_1038941chr15_50352502_-ncRNA_exonic
CAediting_1038942chr15_50352503_-ncRNA_exonic
CAediting_1038943chr15_50352504_-ncRNA_exonic
CAediting_1038944chr15_50352505_-ncRNA_exonic
CAediting_1038945chr15_50352506_-ncRNA_exonic
CAediting_1038946chr15_50352512_-ncRNA_exonic
CAediting_1038947chr15_50352513_-ncRNA_exonic
CAediting_1038948chr15_50352518_-ncRNA_exonic
CAediting_1038949chr15_50352524_-ncRNA_exonic
CAediting_1038950chr15_50352530_-ncRNA_exonic
CAediting_1038951chr15_50352539_-ncRNA_exonic
CAediting_1038952chr15_50352562_-ncRNA_exonic
CAediting_1038953chr15_50352563_-ncRNA_exonic
CAediting_1038954chr15_50352568_-ncRNA_exonic
CAediting_1038955chr15_50352573_-ncRNA_exonic
CAediting_1038956chr15_50352627_-ncRNA_exonic
CAediting_1038957chr15_50353052_-ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1038724chr15_50280494_-SINEAluAluJb
CAediting_1038725chr15_50281241_-SINEAluAluSc8
CAediting_1038726chr15_50281242_-SINEAluAluSc8
CAediting_1038727chr15_50282138_-SINEAluAluJb
CAediting_1038728chr15_50282148_-SINEAluAluJb
CAediting_1038729chr15_50282194_-SINEAluAluJb
CAediting_1038730chr15_50283045_-SINEAluAluSx
CAediting_1038731chr15_50283607_-SINEAluAluSx
CAediting_1038732chr15_50283791_-SINEAluAluSx
CAediting_1038733chr15_50289827_-SINEAluAluJr
CAediting_1038734chr15_50289882_-SINEAluAluJr
CAediting_1038735chr15_50289916_-SINEAluAluJr
CAediting_1038736chr15_50289920_-SINEAluAluJr
CAediting_1038737chr15_50289946_-SINEAluAluJr
CAediting_1038738chr15_50289968_-SINEAluAluJr
CAediting_1038739chr15_50289982_-SINEAluAluJr
CAediting_1038740chr15_50290015_-SINEAluAluJr
CAediting_1038741chr15_50290419_-SINEAluAluSz6
CAediting_1038742chr15_50290425_-SINEAluAluSz6
CAediting_1038743chr15_50290434_-SINEAluAluSz6
CAediting_1038744chr15_50290509_-SINEAluAluSz6
CAediting_1038745chr15_50290560_-SINEAluAluSz6
CAediting_1038746chr15_50291434_-SINEAluAluSx4
CAediting_1038747chr15_50296978_-SINEAluAluSz
CAediting_1038748chr15_50296979_-SINEAluAluSz
CAediting_1038749chr15_50297075_-SINEAluAluSz
CAediting_1038750chr15_50297130_-SINEAluAluSz
CAediting_1038751chr15_50297435_-SINEAluAluSg
CAediting_1038752chr15_50297487_-SINEAluAluSg
CAediting_1038753chr15_50298189_-SINEAluAluJb
CAediting_1038754chr15_50300539_-SINEAluAluSx
CAediting_1038755chr15_50300551_-SINEAluAluSx
CAediting_1038756chr15_50300604_-SINEAluAluSx
CAediting_1038757chr15_50300624_-SINEAluAluSx
CAediting_1038758chr15_50305490_-SINEAluAluJr
CAediting_1038759chr15_50310722_-SINEAluAluSz6
CAediting_1038760chr15_50322809_-SINEAluAluJb
CAediting_1038761chr15_50323744_-SINEAluAluJo
CAediting_1038762chr15_50323804_-SINEAluAluJo
CAediting_1038763chr15_50323980_-SINEAluAluJb
CAediting_1038764chr15_50323992_-SINEAluAluJb
CAediting_1038765chr15_50323997_-SINEAluAluJb
CAediting_1038766chr15_50324030_-SINEAluAluJb
CAediting_1038767chr15_50324170_-SINEAluAluJb
CAediting_1038768chr15_50324612_-SINEAluAluSx
CAediting_1038769chr15_50324617_-SINEAluAluSx
CAediting_1038770chr15_50324641_-SINEAluAluSx
CAediting_1038771chr15_50324656_-SINEAluAluSx
CAediting_1038772chr15_50324666_-SINEAluAluSx
CAediting_1038773chr15_50324682_-SINEAluAluSx
CAediting_1038774chr15_50324683_-SINEAluAluSx
CAediting_1038775chr15_50324709_-SINEAluAluSx
CAediting_1038776chr15_50324714_-SINEAluAluSx
CAediting_1038777chr15_50324717_-SINEAluAluSx
CAediting_1038778chr15_50324720_-SINEAluAluSx
CAediting_1038779chr15_50324755_-SINEAluAluSx
CAediting_1038780chr15_50324826_-SINEAluAluSx
CAediting_1038781chr15_50325670_-SINEAluAluY
CAediting_1038782chr15_50325803_-SINEAluAluY
CAediting_1038783chr15_50325804_-SINEAluAluY
CAediting_1038784chr15_50329969_-SINEAluAluJb
CAediting_1038785chr15_50330009_-SINEAluAluJb
CAediting_1038786chr15_50330045_-SINEAluAluJb
CAediting_1038787chr15_50330071_-SINEAluAluJb
CAediting_1038788chr15_50330176_-SINEAluAluJb
CAediting_1038789chr15_50330177_-SINEAluAluJb
CAediting_1038790chr15_50331967_-SINEAluAluSz
CAediting_1038791chr15_50331971_-SINEAluAluSz
CAediting_1038792chr15_50331972_-SINEAluAluSz
CAediting_1038793chr15_50332121_-SINEAluAluSz
CAediting_1038794chr15_50332147_-SINEAluAluSz
CAediting_1038795chr15_50332150_-SINEAluAluSz
CAediting_1038796chr15_50333236_-SINEAluAluJr
CAediting_1038797chr15_50333498_-SINEAluAluJr
CAediting_1038798chr15_50333866_-SINEAluAluSq2
CAediting_1038799chr15_50333930_-SINEAluAluSq2
CAediting_1038800chr15_50334526_-SINEAluAluJb
CAediting_1038801chr15_50334562_-SINEAluAluJb
CAediting_1038802chr15_50334576_-SINEAluAluJb
CAediting_1038803chr15_50334586_-SINEAluAluJb
CAediting_1038804chr15_50334591_-SINEAluAluJb
CAediting_1038805chr15_50334592_-SINEAluAluJb
CAediting_1038806chr15_50334596_-SINEAluAluJb
CAediting_1038807chr15_50334600_-SINEAluAluJb
CAediting_1038808chr15_50334605_-SINEAluAluJb
CAediting_1038809chr15_50334610_-SINEAluAluJb
CAediting_1038810chr15_50334629_-SINEAluAluJb
CAediting_1038811chr15_50334646_-SINEAluAluJb
CAediting_1038812chr15_50334652_-SINEAluAluJb
CAediting_1038813chr15_50334656_-SINEAluAluJb
CAediting_1038814chr15_50334672_-SINEAluAluJb
CAediting_1038815chr15_50334675_-SINEAluAluJb
CAediting_1038816chr15_50334683_-SINEAluAluJb
CAediting_1038817chr15_50334685_-SINEAluAluJb
CAediting_1038818chr15_50334703_-SINEAluAluJb
CAediting_1038819chr15_50334704_-SINEAluAluJb
CAediting_1038820chr15_50334713_-SINEAluAluJb
CAediting_1038821chr15_50335784_-SINEAluAluSg
CAediting_1038822chr15_50336225_-SINEAluAluSx1
CAediting_1038823chr15_50336237_-SINEAluAluSx1
CAediting_1038824chr15_50336561_-SINEAluAluJo
CAediting_1038825chr15_50336571_-SINEAluAluJo
CAediting_1038826chr15_50336600_-SINEAluAluJo
CAediting_1038827chr15_50336977_-SINEAluAluJb
CAediting_1038828chr15_50337591_-SINEAluAluJb
CAediting_1038829chr15_50337666_-SINEAluAluJb
CAediting_1038830chr15_50338602_-SINEAluAluJb
CAediting_1038831chr15_50338612_-SINEAluAluJb
CAediting_1038832chr15_50338638_-SINEAluAluJb
CAediting_1038833chr15_50338668_-SINEAluAluJb
CAediting_1038834chr15_50338669_-SINEAluAluJb
CAediting_1038835chr15_50338707_-SINEAluAluJb
CAediting_1038836chr15_50339277_-SINEAluAluSz
CAediting_1038837chr15_50344738_-SINEAluAluSp
CAediting_1038838chr15_50344755_-SINEAluAluSp
CAediting_1038839chr15_50344781_-SINEAluAluSp
CAediting_1038840chr15_50345392_-SINEAluAluJo
CAediting_1038841chr15_50345393_-SINEAluAluJo
CAediting_1038842chr15_50345399_-SINEAluAluJo
CAediting_1038843chr15_50345410_-SINEAluAluJo
CAediting_1038844chr15_50345418_-SINEAluAluJo
CAediting_1038845chr15_50345445_-SINEAluAluJo
CAediting_1038846chr15_50345467_-SINEAluAluJo
CAediting_1038847chr15_50345472_-SINEAluAluJo
CAediting_1038848chr15_50345554_-SINEAluAluJo
CAediting_1038849chr15_50345558_-SINEAluAluJo
CAediting_1038850chr15_50345840_-SINEAluAluY
CAediting_1038851chr15_50345876_-SINEAluAluY
CAediting_1038852chr15_50346886_-SINEAluAluSg4
CAediting_1038853chr15_50346887_-SINEAluAluSg4
CAediting_1038854chr15_50346938_-SINEAluAluSg4
CAediting_1038855chr15_50346944_-SINEAluAluSg4
CAediting_1038856chr15_50346954_-SINEAluAluSg4
CAediting_1038857chr15_50346957_-SINEAluAluSg4
CAediting_1038858chr15_50346958_-SINEAluAluSg4
CAediting_1038859chr15_50346959_-SINEAluAluSg4
CAediting_1038860chr15_50346960_-SINEAluAluSg4
CAediting_1038861chr15_50346961_-SINEAluAluSg4
CAediting_1038862chr15_50346963_-SINEAluAluSg4
CAediting_1038863chr15_50346972_-SINEAluAluSg4
CAediting_1038864chr15_50346978_-SINEAluAluSg4
CAediting_1038865chr15_50346983_-SINEAluAluSg4
CAediting_1038866chr15_50346985_-SINEAluAluSg4
CAediting_1038867chr15_50346993_-SINEAluAluSg4
CAediting_1038868chr15_50346994_-SINEAluAluSg4
CAediting_1038869chr15_50347017_-SINEAluAluSg4
CAediting_1038870chr15_50347060_-SINEAluAluSg4
CAediting_1038871chr15_50347061_-SINEAluAluSg4
CAediting_1038872chr15_50347069_-SINEAluAluSg4
CAediting_1038873chr15_50347799_-SINEAluAluSx1
CAediting_1038874chr15_50347838_-SINEAluAluSx1
CAediting_1038875chr15_50347877_-SINEAluAluSx1
CAediting_1038876chr15_50347886_-SINEAluAluSx1
CAediting_1038877chr15_50347888_-SINEAluAluSx1
CAediting_1038878chr15_50347890_-SINEAluAluSx1
CAediting_1038879chr15_50347938_-SINEAluAluSx1
CAediting_1038880chr15_50347944_-SINEAluAluSx1
CAediting_1038881chr15_50347947_-SINEAluAluSx1
CAediting_1038882chr15_50347986_-SINEAluAluSx1
CAediting_1038883chr15_50348029_-SINEAluAluSx1
CAediting_1038884chr15_50348284_-SINEAluAluSz
CAediting_1038885chr15_50348285_-SINEAluAluSz
CAediting_1038886chr15_50348327_-SINEAluAluSz
CAediting_1038887chr15_50348338_-SINEAluAluSz
CAediting_1038888chr15_50348352_-SINEAluAluSz
CAediting_1038889chr15_50348360_-SINEAluAluSz
CAediting_1038890chr15_50348383_-SINEAluAluSz
CAediting_1038891chr15_50348411_-SINEAluAluSz
CAediting_1038892chr15_50348415_-SINEAluAluSz
CAediting_1038893chr15_50348424_-SINEAluAluSz
CAediting_1038894chr15_50348433_-SINEAluAluSz
CAediting_1038895chr15_50348445_-SINEAluAluSz
CAediting_1038896chr15_50348523_-SINEAluAluSz
CAediting_1038897chr15_50348607_-SINEAluAluSc
CAediting_1038898chr15_50348650_-SINEAluAluSc
CAediting_1038899chr15_50348682_-SINEAluAluSc
CAediting_1038900chr15_50348693_-SINEAluAluSc
CAediting_1038901chr15_50348699_-SINEAluAluSc
CAediting_1038902chr15_50348762_-SINEAluAluSc
CAediting_1038903chr15_50348818_-SINEAluAluSc
CAediting_1038904chr15_50348829_-SINEAluAluSc
CAediting_1038905chr15_50351320_-SINEAluAluJb
CAediting_1038906chr15_50351332_-SINEAluAluJb
CAediting_1038907chr15_50351333_-SINEAluAluJb
CAediting_1038908chr15_50351346_-SINEAluAluJb
CAediting_1038909chr15_50351359_-SINEAluAluJb
CAediting_1038910chr15_50351371_-SINEAluAluJb
CAediting_1038911chr15_50351372_-SINEAluAluJb
CAediting_1038912chr15_50351373_-SINEAluAluJb
CAediting_1038913chr15_50351396_-SINEAluAluJb
CAediting_1038914chr15_50351401_-SINEAluAluJb
CAediting_1038915chr15_50351403_-SINEAluAluJb
CAediting_1038916chr15_50351406_-SINEAluAluJb
CAediting_1038917chr15_50351408_-SINEAluAluJb
CAediting_1038918chr15_50351420_-SINEAluAluJb
CAediting_1038919chr15_50351427_-SINEAluAluJb
CAediting_1038920chr15_50351441_-SINEAluAluJb
CAediting_1038921chr15_50351452_-SINEAluAluJb
CAediting_1038922chr15_50351457_-SINEAluAluJb
CAediting_1038923chr15_50351464_-SINEAluAluJb
CAediting_1038924chr15_50351476_-SINEAluAluJb
CAediting_1038925chr15_50351516_-SINEAluAluJb
CAediting_1038926chr15_50351517_-SINEAluAluJb
CAediting_1038927chr15_50351552_-SINEAluAluJb
CAediting_1038928chr15_50351556_-SINEAluAluJb
CAediting_1038929chr15_50352373_-SINEAluAluSq2
CAediting_1038930chr15_50352387_-SINEAluAluSq2
CAediting_1038931chr15_50352403_-SINEAluAluSq2
CAediting_1038932chr15_50352407_-SINEAluAluSq2
CAediting_1038933chr15_50352408_-SINEAluAluSq2
CAediting_1038934chr15_50352428_-SINEAluAluSq2
CAediting_1038935chr15_50352446_-SINEAluAluSq2
CAediting_1038936chr15_50352463_-SINEAluAluSq2
CAediting_1038937chr15_50352467_-SINEAluAluSq2
CAediting_1038938chr15_50352472_-SINEAluAluSq2
CAediting_1038939chr15_50352473_-SINEAluAluSq2
CAediting_1038940chr15_50352499_-SINEAluAluSq2
CAediting_1038941chr15_50352502_-SINEAluAluSq2
CAediting_1038942chr15_50352503_-SINEAluAluSq2
CAediting_1038943chr15_50352504_-SINEAluAluSq2
CAediting_1038944chr15_50352505_-SINEAluAluSq2
CAediting_1038945chr15_50352506_-SINEAluAluSq2
CAediting_1038946chr15_50352512_-SINEAluAluSq2
CAediting_1038947chr15_50352513_-SINEAluAluSq2
CAediting_1038948chr15_50352518_-SINEAluAluSq2
CAediting_1038949chr15_50352524_-SINEAluAluSq2
CAediting_1038950chr15_50352530_-SINEAluAluSq2
CAediting_1038951chr15_50352539_-SINEAluAluSq2
CAediting_1038952chr15_50352562_-SINEAluAluSq2
CAediting_1038953chr15_50352563_-SINEAluAluSq2
CAediting_1038954chr15_50352568_-SINEAluAluSq2
CAediting_1038955chr15_50352573_-SINEAluAluSq2
CAediting_1038956chr15_50352627_-SINEAluAluSq2

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RNA A-to-I editing events in the alternative splicing sites for GABPB1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000104064.15.GABPB1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000104064.15.GABPB1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GABPB1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for GABPB1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GABPB1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000104064.15ENST00000220429hsa-miR-548aa50277883502778908mer-1a5027788350277915147-10.73

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GABPB1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for GABPB1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
PRADCAediting_1038915chr15_50351403_-0.02106163098077570.325533533012062....
LGGCAediting_1038921chr15_50351452_-....0.02606907673557340.278116546962518
LGGCAediting_1038928chr15_50351556_-..0.03327987667387420.1323282508662560.0006281344945383350.211078864554445
BRCACAediting_1038928chr15_50351556_-0.004415828871176210.209537496662256....
PCPGCAediting_1038928chr15_50351556_-0.003245417630597550.359765162873159....

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Relation with cancer stages for GABPB1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for GABPB1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for GABPB1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GABPB1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource