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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CADM2 (CAeditome ID:253559)

Gene summary for CADM2

check button Gene summary
Gene informationGene symbol

CADM2

Gene ID

253559

Gene namecell adhesion molecule 2
SynonymsIGSF4D|NECL3|Necl-3|SynCAM 2|synCAM2
Cytomap

3p12.1

Type of geneprotein-coding
Descriptioncell adhesion molecule 2immunoglobulin superfamily member 4Dnectin-like 3nectin-like protein 3synaptic cell adhesion molecule 2
Modification date20210518
UniProtAcc

Q8N3J6

Context- 32395509(Cell adhesion molecule 2 (CADM2) promotes brain metastasis by inducing epithelial-mesenchymal transition (EMT) in human non-small cell lung cancer)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for CADM2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000175161.12

check button RNA A-to-I editing events in Cancer.
CAediting_297010(85000226, +), CAediting_297011(85000238, +), CAediting_297012(85000253, +), CAediting_297013(85000363, +), CAediting_297014(85016584, +), CAediting_297015(85016628, +), CAediting_297016(85021628, +), CAediting_297017(85036923, +), CAediting_297018(85037039, +), CAediting_297019(85037049, +), CAediting_297020(85037050, +), CAediting_297021(85124403, +), CAediting_297022(85124547, +), CAediting_297023(85259683, +), CAediting_297024(85263174, +), CAediting_297025(85318051, +), CAediting_297026(85318057, +), CAediting_297027(85318066, +), CAediting_297028(85318193, +), CAediting_297029(85329274, +), CAediting_297030(85345101, +), CAediting_297031(85345138, +), CAediting_297032(85345191, +), CAediting_297033(85345194, +), CAediting_297034(85345197, +), CAediting_297035(85345203, +), CAediting_297036(85345220, +), CAediting_297037(85345234, +), CAediting_297038(85347022, +), CAediting_297039(85347027, +), CAediting_297040(85347046, +), CAediting_297041(85347062, +), CAediting_297042(85347063, +), CAediting_297043(85347064, +), CAediting_297044(85347065, +), CAediting_297045(85347067, +), CAediting_297046(85347073, +), CAediting_297047(85347076, +), CAediting_297048(85347080, +), CAediting_297049(85347108, +), CAediting_297050(85347129, +), CAediting_297051(85347135, +), CAediting_297052(85347137, +), CAediting_297053(85347147, +), CAediting_297054(85347154, +), CAediting_297055(85407754, +), CAediting_297056(85407758, +), CAediting_297057(85407782, +), CAediting_297058(85407888, +), CAediting_297059(85407894, +), CAediting_297060(85407898, +), CAediting_297061(85407939, +), CAediting_297062(85411897, +), CAediting_297063(85412903, +), CAediting_297064(85412925, +), CAediting_297065(85412954, +), CAediting_297066(85412956, +), CAediting_297067(85412960, +), CAediting_297068(85412963, +), CAediting_297069(85412964, +), CAediting_297070(85412975, +), CAediting_297071(85412978, +), CAediting_297072(85412980, +), CAediting_297073(85412994, +), CAediting_297074(85412998, +), CAediting_297075(85413003, +), CAediting_297076(85413026, +), CAediting_297077(85413030, +), CAediting_297078(85413086, +), CAediting_297079(85562358, +), CAediting_297080(85562363, +), CAediting_297081(85562393, +), CAediting_297082(85562419, +), CAediting_297083(85562432, +), CAediting_297084(85618920, +), CAediting_297085(85618934, +), CAediting_297086(85658059, +), CAediting_297087(85658087, +), CAediting_297088(85693019, +), CAediting_297089(85693058, +), CAediting_297090(85693170, +), CAediting_297091(85693325, +), CAediting_297092(85693331, +), CAediting_297093(85693352, +), CAediting_297094(85693361, +), CAediting_297095(85693433, +), CAediting_297096(85693486, +), CAediting_297097(85693659, +), CAediting_297098(85693699, +), CAediting_297099(85693707, +), CAediting_297100(85693730, +), CAediting_297101(85693773, +), CAediting_297102(85693845, +), CAediting_297103(85748986, +), CAediting_297104(86070723, +), CAediting_297105(86070730, +), CAediting_297106(86070748, +), CAediting_297107(86073477, +), CAediting_297108(86073485, +), CAediting_297109(86073488, +), CAediting_297110(86073496, +), CAediting_297111(86073497, +),

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RNA editing positional annotations for CADM2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_297010chr3_85000226_+intronic
CAediting_297011chr3_85000238_+intronic
CAediting_297012chr3_85000253_+intronic
CAediting_297013chr3_85000363_+intronic
CAediting_297014chr3_85016584_+intronic
CAediting_297015chr3_85016628_+intronic
CAediting_297016chr3_85021628_+intronic
CAediting_297017chr3_85036923_+intronic
CAediting_297018chr3_85037039_+intronic
CAediting_297019chr3_85037049_+intronic
CAediting_297020chr3_85037050_+intronic
CAediting_297021chr3_85124403_+intronic
CAediting_297022chr3_85124547_+intronic
CAediting_297023chr3_85259683_+intronic
CAediting_297024chr3_85263174_+intronic
CAediting_297025chr3_85318051_+intronic
CAediting_297026chr3_85318057_+intronic
CAediting_297027chr3_85318066_+intronic
CAediting_297028chr3_85318193_+intronic
CAediting_297029chr3_85329274_+intronic
CAediting_297030chr3_85345101_+intronic
CAediting_297031chr3_85345138_+intronic
CAediting_297032chr3_85345191_+intronic
CAediting_297033chr3_85345194_+intronic
CAediting_297034chr3_85345197_+intronic
CAediting_297035chr3_85345203_+intronic
CAediting_297036chr3_85345220_+intronic
CAediting_297037chr3_85345234_+intronic
CAediting_297038chr3_85347022_+intronic
CAediting_297039chr3_85347027_+intronic
CAediting_297040chr3_85347046_+intronic
CAediting_297041chr3_85347062_+intronic
CAediting_297042chr3_85347063_+intronic
CAediting_297043chr3_85347064_+intronic
CAediting_297044chr3_85347065_+intronic
CAediting_297045chr3_85347067_+intronic
CAediting_297046chr3_85347073_+intronic
CAediting_297047chr3_85347076_+intronic
CAediting_297048chr3_85347080_+intronic
CAediting_297049chr3_85347108_+intronic
CAediting_297050chr3_85347129_+intronic
CAediting_297051chr3_85347135_+intronic
CAediting_297052chr3_85347137_+intronic
CAediting_297053chr3_85347147_+intronic
CAediting_297054chr3_85347154_+intronic
CAediting_297055chr3_85407754_+intronic
CAediting_297056chr3_85407758_+intronic
CAediting_297057chr3_85407782_+intronic
CAediting_297058chr3_85407888_+intronic
CAediting_297059chr3_85407894_+intronic
CAediting_297060chr3_85407898_+intronic
CAediting_297061chr3_85407939_+intronic
CAediting_297062chr3_85411897_+intronic
CAediting_297063chr3_85412903_+intronic
CAediting_297064chr3_85412925_+intronic
CAediting_297065chr3_85412954_+intronic
CAediting_297066chr3_85412956_+intronic
CAediting_297067chr3_85412960_+intronic
CAediting_297068chr3_85412963_+intronic
CAediting_297069chr3_85412964_+intronic
CAediting_297070chr3_85412975_+intronic
CAediting_297071chr3_85412978_+intronic
CAediting_297072chr3_85412980_+intronic
CAediting_297073chr3_85412994_+intronic
CAediting_297074chr3_85412998_+intronic
CAediting_297075chr3_85413003_+intronic
CAediting_297076chr3_85413026_+intronic
CAediting_297077chr3_85413030_+intronic
CAediting_297078chr3_85413086_+intronic
CAediting_297079chr3_85562358_+intronic
CAediting_297080chr3_85562363_+intronic
CAediting_297081chr3_85562393_+intronic
CAediting_297082chr3_85562419_+intronic
CAediting_297083chr3_85562432_+intronic
CAediting_297084chr3_85618920_+intronic
CAediting_297085chr3_85618934_+intronic
CAediting_297086chr3_85658059_+intronic
CAediting_297087chr3_85658087_+intronic
CAediting_297088chr3_85693019_+intronic
CAediting_297089chr3_85693058_+intronic
CAediting_297090chr3_85693170_+intronic
CAediting_297091chr3_85693325_+intronic
CAediting_297092chr3_85693331_+intronic
CAediting_297093chr3_85693352_+intronic
CAediting_297094chr3_85693361_+intronic
CAediting_297095chr3_85693433_+intronic
CAediting_297096chr3_85693486_+intronic
CAediting_297097chr3_85693659_+intronic
CAediting_297098chr3_85693699_+intronic
CAediting_297099chr3_85693707_+intronic
CAediting_297100chr3_85693730_+intronic
CAediting_297101chr3_85693773_+intronic
CAediting_297102chr3_85693845_+intronic
CAediting_297103chr3_85748986_+intronic
CAediting_297104chr3_86070723_+UTR3
CAediting_297105chr3_86070730_+UTR3
CAediting_297106chr3_86070748_+UTR3
CAediting_297107chr3_86073477_+UTR3
CAediting_297108chr3_86073485_+UTR3
CAediting_297109chr3_86073488_+UTR3
CAediting_297110chr3_86073496_+UTR3
CAediting_297111chr3_86073497_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_297010chr3_85000226_+SINEAluAluJo
CAediting_297011chr3_85000238_+SINEAluAluJo
CAediting_297012chr3_85000253_+SINEAluAluJo
CAediting_297013chr3_85000363_+SINEAluAluJo
CAediting_297014chr3_85016584_+SINEAluAluSx
CAediting_297015chr3_85016628_+SINEAluAluSx
CAediting_297016chr3_85021628_+SINEAluAluSq2
CAediting_297017chr3_85036923_+SINEAluAluSq
CAediting_297018chr3_85037039_+SINEAluAluSq
CAediting_297019chr3_85037049_+SINEAluAluSq
CAediting_297020chr3_85037050_+SINEAluAluSq
CAediting_297021chr3_85124403_+SINEAluAluJr
CAediting_297022chr3_85124547_+SINEAluAluJr
CAediting_297024chr3_85263174_+SINEAluAluSz
CAediting_297025chr3_85318051_+SINEAluAluJb
CAediting_297026chr3_85318057_+SINEAluAluJb
CAediting_297027chr3_85318066_+SINEAluAluJb
CAediting_297028chr3_85318193_+SINEAluAluJb
CAediting_297029chr3_85329274_+SINEAluAluSg
CAediting_297030chr3_85345101_+SINEAluAluSx
CAediting_297031chr3_85345138_+SINEAluAluSx
CAediting_297032chr3_85345191_+SINEAluAluSx
CAediting_297033chr3_85345194_+SINEAluAluSx
CAediting_297034chr3_85345197_+SINEAluAluSx
CAediting_297035chr3_85345203_+SINEAluAluSx
CAediting_297036chr3_85345220_+SINEAluAluSx
CAediting_297037chr3_85345234_+SINEAluAluSx
CAediting_297038chr3_85347022_+SINEAluAluSz
CAediting_297039chr3_85347027_+SINEAluAluSz
CAediting_297040chr3_85347046_+SINEAluAluSz
CAediting_297041chr3_85347062_+SINEAluAluSz
CAediting_297042chr3_85347063_+SINEAluAluSz
CAediting_297043chr3_85347064_+SINEAluAluSz
CAediting_297044chr3_85347065_+SINEAluAluSz
CAediting_297045chr3_85347067_+SINEAluAluSz
CAediting_297046chr3_85347073_+SINEAluAluSz
CAediting_297047chr3_85347076_+SINEAluAluSz
CAediting_297048chr3_85347080_+SINEAluAluSz
CAediting_297049chr3_85347108_+SINEAluAluSz
CAediting_297050chr3_85347129_+SINEAluAluSz
CAediting_297051chr3_85347135_+SINEAluAluSz
CAediting_297052chr3_85347137_+SINEAluAluSz
CAediting_297053chr3_85347147_+SINEAluAluSz
CAediting_297054chr3_85347154_+SINEAluAluSz
CAediting_297055chr3_85407754_+SINEAluAluJr
CAediting_297056chr3_85407758_+SINEAluAluJr
CAediting_297057chr3_85407782_+SINEAluAluJr
CAediting_297058chr3_85407888_+SINEAluAluJr
CAediting_297059chr3_85407894_+SINEAluAluJr
CAediting_297060chr3_85407898_+SINEAluAluJr
CAediting_297061chr3_85407939_+SINEAluAluJr
CAediting_297062chr3_85411897_+SINEAluAluSz
CAediting_297063chr3_85412903_+SINEAluAluYe6
CAediting_297064chr3_85412925_+SINEAluAluYe6
CAediting_297065chr3_85412954_+SINEAluAluYe6
CAediting_297066chr3_85412956_+SINEAluAluYe6
CAediting_297067chr3_85412960_+SINEAluAluYe6
CAediting_297068chr3_85412963_+SINEAluAluYe6
CAediting_297069chr3_85412964_+SINEAluAluYe6
CAediting_297070chr3_85412975_+SINEAluAluYe6
CAediting_297071chr3_85412978_+SINEAluAluYe6
CAediting_297072chr3_85412980_+SINEAluAluYe6
CAediting_297073chr3_85412994_+SINEAluAluYe6
CAediting_297074chr3_85412998_+SINEAluAluYe6
CAediting_297075chr3_85413003_+SINEAluAluYe6
CAediting_297076chr3_85413026_+SINEAluAluYe6
CAediting_297077chr3_85413030_+SINEAluAluYe6
CAediting_297078chr3_85413086_+SINEAluAluYe6
CAediting_297079chr3_85562358_+SINEAluAluSp
CAediting_297080chr3_85562363_+SINEAluAluSp
CAediting_297081chr3_85562393_+SINEAluAluSp
CAediting_297082chr3_85562419_+SINEAluAluSp
CAediting_297083chr3_85562432_+SINEAluAluSp
CAediting_297084chr3_85618920_+SINEAluAluSx1
CAediting_297085chr3_85618934_+SINEAluAluSx1
CAediting_297088chr3_85693019_+SINEAluAluSc
CAediting_297089chr3_85693058_+SINEAluAluSc
CAediting_297090chr3_85693170_+SINEAluAluSc
CAediting_297091chr3_85693325_+SINEAluAluYk4
CAediting_297092chr3_85693331_+SINEAluAluYk4
CAediting_297093chr3_85693352_+SINEAluAluYk4
CAediting_297094chr3_85693361_+SINEAluAluYk4
CAediting_297095chr3_85693433_+SINEAluAluYk4
CAediting_297096chr3_85693486_+SINEAluAluYk4
CAediting_297097chr3_85693659_+SINEAluAluSx3
CAediting_297098chr3_85693699_+SINEAluAluSx3
CAediting_297099chr3_85693707_+SINEAluAluSx3
CAediting_297100chr3_85693730_+SINEAluAluSx3
CAediting_297101chr3_85693773_+SINEAluAluSx3
CAediting_297102chr3_85693845_+SINEAluAluSx3

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RNA A-to-I editing events in the alternative splicing sites for CADM2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000175161.12.CADM2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000175161.12.CADM2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CADM2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CADM2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CADM2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_297108chr3_86073485_+ENSG00000175161.12ENST00000383699hsa-miR-450b-5p86073482860734887mer-m88607346786073489152.00-10.23
CAediting_297109chr3_86073488_+ENSG00000175161.12ENST00000383699hsa-miR-3664-5p86073484860734918mer-1a8607347086073491140.00-9.71
CAediting_297109chr3_86073488_+ENSG00000175161.12ENST00000383699hsa-miR-368686073482860734887mer-m88607346686073489154.00-11.13
CAediting_297104chr3_86070723_+ENSG00000175161.12ENST00000383699hsa-miR-432586070718860707247mer-m88607070786070725151.00-12.19
CAediting_297105chr3_86070730_+ENSG00000175161.12ENST00000383699hsa-miR-30a-3p86070726860707338mer-1a8607071286070733150.00-10.50
CAediting_297105chr3_86070730_+ENSG00000175161.12ENST00000383699hsa-miR-30d-3p86070726860707338mer-1a8607071286070733150.00-11.36
CAediting_297105chr3_86070730_+ENSG00000175161.12ENST00000383699hsa-miR-30e-3p86070726860707338mer-1a8607071386070733147.00-8.52
CAediting_297105chr3_86070730_+ENSG00000175161.12ENST00000383699hsa-miR-430286070723860707308mer-1a8607071286070730143.00-12.76
CAediting_297106chr3_86070748_+ENSG00000175161.12ENST00000383699hsa-miR-5591-3p86070745860707528mer-1a8607073386070752150.00-13.57
CAediting_297107chr3_86073477_+ENSG00000175161.12ENST00000383699hsa-let-7f-2-3p86073474860734807mer-m88607345986073481146.00-9.10
CAediting_297107chr3_86073477_+ENSG00000175161.12ENST00000383699hsa-miR-1185-1-3p86073474860734807mer-m88607346086073481145.00-11.89
CAediting_297107chr3_86073477_+ENSG00000175161.12ENST00000383699hsa-miR-1185-2-3p86073474860734807mer-m88607346086073481145.00-12.83
CAediting_297107chr3_86073477_+ENSG00000175161.12ENST00000383699hsa-miR-7151-3p86073472860734787mer-m88607345786073479144.00-13.31
CAediting_297111chr3_86073497_+ENSG00000175161.12ENST00000383699hsa-miR-442786073490860734967mer-m88607347786073497144.00-9.47
CAediting_297111chr3_86073497_+ENSG00000175161.12ENST00000383699hsa-miR-60386073495860735028mer-1a8607348386073502167.00-16.95

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_297105chr3_86070730_+ENSG00000175161.12ENST00000383699hsa-miR-122b-5p86070724860707318mer-1a8607070686070731151-17.04

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000175161.12ENST00000383699hsa-miR-200b-3p86070296860703027mer-m88607028486070303153-16.49
CAediting_393chr1_1167164_+ENSG00000175161.12ENST00000383699hsa-miR-200b-3p86071461860714677mer-m88607144886071468144-11.18
CAediting_86358chr1_109598906_+ENSG00000175161.12ENST00000383699hsa-miR-197-5p86071668860716736mer8607165286071674142-23.69
CAediting_117844chr1_162342605_+ENSG00000175161.12ENST00000383699hsa-miR-556-3p86070893860708997mer-m88607087986070900147-10.95
CAediting_228905chr2_188297554_+ENSG00000175161.12ENST00000383699hsa-miR-561-3p86074040860740467mer-m88607402586074047155-14.15
CAediting_396018chr5_1062918_-ENSG00000175161.12ENST00000383699hsa-miR-463586073105860731128mer-1a8607309286073112141-12.74
CAediting_414656chr5_72878640_+ENSG00000175161.12ENST00000383699hsa-miR-4804-3p86068703860687108mer-1a8606869286068710151-16.44

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_442554chr5_154685830_+ENSG00000175161.12ENST00000383699hsa-miR-130386070569860705768mer-1a8607055586070576145-14.43
CAediting_442554chr5_154685830_+ENSG00000175161.12ENST00000383699hsa-miR-130386072196860722038mer-1a8607218286072203142-11.76
CAediting_442554chr5_154685830_+ENSG00000175161.12ENST00000383699hsa-miR-130386067554860675607mer-m88606754086067561141-9.65
CAediting_1160181chr17_7017644_-ENSG00000175161.12ENST00000383699hsa-miR-195-3p86068321860683277mer-m88606830686068328145-8.39
CAediting_1160181chr17_7017644_-ENSG00000175161.12ENST00000383699hsa-miR-195-3p86070834860708407mer-m88607082086070841148-14.23
CAediting_1160181chr17_7017644_-ENSG00000175161.12ENST00000383699hsa-miR-195-3p86071487860714948mer-1a8607147486071494143-8.33
CAediting_1160181chr17_7017644_-ENSG00000175161.12ENST00000383699hsa-miR-195-3p86072731860727388mer-1a8607271886072738142-9.53
CAediting_393chr1_1167164_+ENSG00000175161.12ENST00000383699hsa-miR-200b-3p86072049860720557mer-m88607203486072056154-11.62
CAediting_393chr1_1167164_+ENSG00000175161.12ENST00000383699hsa-miR-200b-3p86074148860741558mer-1a8607413586074155148-12.49
CAediting_1229413chr17_67471544_+ENSG00000175161.12ENST00000383699hsa-miR-548aa86068481860684888mer-1a8606846486068488149-8.85
CAediting_1229414chr17_67471546_+ENSG00000175161.12ENST00000383699hsa-miR-548aa86068481860684888mer-1a8606846486068488149-8.85
CAediting_1229415chr17_67471547_+ENSG00000175161.12ENST00000383699hsa-miR-548aa86068481860684888mer-1a8606846486068488149-8.85
CAediting_117844chr1_162342605_+ENSG00000175161.12ENST00000383699hsa-miR-556-3p86068516860685238mer-1a8606850386068523142-7.1
CAediting_980496chr14_31014685_-ENSG00000175161.12ENST00000383699hsa-miR-624-3p86073962860739698mer-1a8607394986073969155-13.42
CAediting_1351755chr19_40282625_-ENSG00000175161.12ENST00000383699hsa-miR-64186070525860705328mer-1a8607050886070532148-13.59
CAediting_1351755chr19_40282625_-ENSG00000175161.12ENST00000383699hsa-miR-64186074261860742666mer8607424486074267146-20.99

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CADM2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000383699.6protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_297104ENST00000383699.6chr3_86070723_+-2210.90-2210.90-2221.23
CAediting_297105ENST00000383699.6chr3_86070730_+-2211.90-2210.90-2221.23
CAediting_297106ENST00000383699.6chr3_86070748_+-2213.80-2210.90-2221.23
CAediting_297107ENST00000383699.6chr3_86073477_+-2214.40-2210.90-2221.23
CAediting_297108ENST00000383699.6chr3_86073485_+-2210.90-2210.90-2221.23
CAediting_297109ENST00000383699.6chr3_86073488_+-2212.80-2210.90-2221.23
CAediting_297110ENST00000383699.6chr3_86073496_+-2210.90-2210.90-2221.23
CAediting_297111ENST00000383699.6chr3_86073497_+-2213.70-2210.90-2221.23

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Relation with ADAR for CADM2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LGGCAediting_297108chr3_86073485_+5.34570284222444e-190.470759162598372....
GBMCAediting_297108chr3_86073485_+6.61082168588528e-060.433548778082188....
PCPGCAediting_297108chr3_86073485_+7.4090602320034e-070.428961513627413....
LGGCAediting_297109chr3_86073488_+0.009478921684358590.346846461718134....
PCPGCAediting_297109chr3_86073488_+0.01260415075120490.35041032225677....

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Relation with cancer stages for CADM2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for CADM2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CADM2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CADM2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource