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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: FUT2 (CAeditome ID:2524)

Gene summary for FUT2

check button Gene summary
Gene informationGene symbol

FUT2

Gene ID

2524

Gene namefucosyltransferase 2
SynonymsB12QTL1|SE|SEC2|Se2|sej
Cytomap

19q13.33

Type of geneprotein-coding
Descriptiongalactoside alpha-(1,2)-fucosyltransferase 2GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2alpha (1,2) fucosyltransferasealpha(1,2)FT 2alpha(1,2)FT2fucosyltransferase 2 (secretor status included)galactoside 2-L-fucosyltransferasegala
Modification date20210518
UniProtAcc

Q10981

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for FUT2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000176920.11
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1373305(48697082, +), CAediting_1373306(48697160, +), CAediting_1373307(48697290, +), CAediting_1373308(48697896, +), CAediting_1373309(48698069, +), CAediting_1373310(48698454, +), CAediting_1373311(48698462, +), CAediting_1373312(48698506, +), CAediting_1373313(48698511, +), CAediting_1373314(48698535, +), CAediting_1373315(48698541, +), CAediting_1373316(48698571, +), CAediting_1373317(48698581, +), CAediting_1373318(48698616, +), CAediting_1373319(48698622, +), CAediting_1373320(48698625, +), CAediting_1373321(48698705, +), CAediting_1373322(48698766, +), CAediting_1373323(48698776, +), CAediting_1373324(48698811, +), CAediting_1373325(48698814, +), CAediting_1373326(48698828, +), CAediting_1373327(48698844, +), CAediting_1373328(48698850, +), CAediting_1373329(48699225, +), CAediting_1373330(48699263, +), CAediting_1373331(48699315, +), CAediting_1373332(48699324, +), CAediting_1373333(48699327, +), CAediting_1373334(48699904, +), CAediting_1373335(48699944, +), CAediting_1373336(48700026, +), CAediting_1373337(48700032, +), CAediting_1373338(48700033, +), CAediting_1373339(48700401, +), CAediting_1373340(48700593, +), CAediting_1373341(48701202, +), CAediting_1373342(48701208, +), CAediting_1373343(48701246, +), CAediting_1373344(48701247, +), CAediting_1373345(48701282, +), CAediting_1373346(48701318, +), CAediting_1373347(48701873, +), CAediting_1373348(48701941, +), CAediting_1373349(48702145, +), CAediting_1373350(48702176, +), CAediting_1373351(48702181, +), CAediting_1373352(48702286, +), CAediting_1373353(48702308, +), CAediting_1373354(48702346, +), CAediting_1373355(48704158, +), CAediting_1373356(48704166, +), CAediting_1373357(48704167, +), CAediting_1373358(48704183, +), CAediting_1373359(48704207, +), CAediting_1373360(48704212, +), CAediting_1373361(48704215, +), CAediting_1373362(48704220, +), CAediting_1373363(48704221, +), CAediting_1373364(48704226, +), CAediting_1373365(48704235, +), CAediting_1373366(48704236, +), CAediting_1373367(48704245, +), CAediting_1373368(48704246, +), CAediting_1373369(48704266, +), CAediting_1373370(48704275, +), CAediting_1373371(48704279, +), CAediting_1373372(48704293, +), CAediting_1373373(48704301, +), CAediting_1373374(48704302, +), CAediting_1373375(48704307, +), CAediting_1373376(48704311, +), CAediting_1373377(48704318, +), CAediting_1373378(48704324, +), CAediting_1373379(48704328, +), CAediting_1373380(48704331, +), CAediting_1373381(48704334, +), CAediting_1373382(48704342, +), CAediting_1373383(48704343, +), CAediting_1373384(48704347, +), CAediting_1373385(48704363, +), CAediting_1373386(48704367, +), CAediting_1373387(48704371, +), CAediting_1373388(48704372, +), CAediting_1373389(48704387, +), CAediting_1373390(48704404, +), CAediting_1373391(48704406, +), CAediting_1373392(48704409, +), CAediting_1373393(48704410, +), CAediting_1373394(48704424, +), CAediting_1373395(48704425, +), CAediting_1373396(48704428, +), CAediting_1373397(48704430, +), CAediting_1373398(48704431, +), CAediting_1373399(48704438, +), CAediting_1373400(48704439, +), CAediting_1373401(48704443, +), CAediting_1373402(48704444, +), CAediting_1373403(48704445, +), CAediting_1373404(48704446, +), CAediting_1373405(48705154, +), CAediting_1373406(48705166, +), CAediting_1373407(48705172, +), CAediting_1373408(48705175, +), CAediting_1373409(48705185, +), CAediting_1373410(48705190, +), CAediting_1373411(48705204, +), CAediting_1373412(48705210, +), CAediting_1373413(48705211, +), CAediting_1373414(48705215, +), CAediting_1373415(48705228, +), CAediting_1373416(48705237, +), CAediting_1373417(48705240, +), CAediting_1373418(48705250, +), CAediting_1373419(48705252, +), CAediting_1373420(48705263, +), CAediting_1373421(48705266, +), CAediting_1373422(48705276, +), CAediting_1373423(48705277, +), CAediting_1373424(48705283, +), CAediting_1373425(48705285, +), CAediting_1373426(48705291, +), CAediting_1373427(48705297, +), CAediting_1373428(48705298, +), CAediting_1373429(48705302, +), CAediting_1373430(48705311, +), CAediting_1373431(48705320, +), CAediting_1373432(48705331, +), CAediting_1373433(48705332, +), CAediting_1373434(48705333, +), CAediting_1373435(48705340, +), CAediting_1373436(48705345, +), CAediting_1373437(48705370, +), CAediting_1373438(48705371, +), CAediting_1373439(48705380, +), CAediting_1373440(48705383, +), CAediting_1373441(48705392, +),

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RNA editing positional annotations for FUT2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1373305chr19_48697082_+intronic
CAediting_1373306chr19_48697160_+intronic
CAediting_1373307chr19_48697290_+intronic
CAediting_1373308chr19_48697896_+intronic
CAediting_1373309chr19_48698069_+intronic
CAediting_1373310chr19_48698454_+intronic
CAediting_1373311chr19_48698462_+intronic
CAediting_1373312chr19_48698506_+intronic
CAediting_1373313chr19_48698511_+intronic
CAediting_1373314chr19_48698535_+intronic
CAediting_1373315chr19_48698541_+intronic
CAediting_1373316chr19_48698571_+intronic
CAediting_1373317chr19_48698581_+intronic
CAediting_1373318chr19_48698616_+intronic
CAediting_1373319chr19_48698622_+intronic
CAediting_1373320chr19_48698625_+intronic
CAediting_1373321chr19_48698705_+intronic
CAediting_1373322chr19_48698766_+intronic
CAediting_1373323chr19_48698776_+intronic
CAediting_1373324chr19_48698811_+intronic
CAediting_1373325chr19_48698814_+intronic
CAediting_1373326chr19_48698828_+intronic
CAediting_1373327chr19_48698844_+intronic
CAediting_1373328chr19_48698850_+intronic
CAediting_1373329chr19_48699225_+intronic
CAediting_1373330chr19_48699263_+intronic
CAediting_1373331chr19_48699315_+intronic
CAediting_1373332chr19_48699324_+intronic
CAediting_1373333chr19_48699327_+intronic
CAediting_1373334chr19_48699904_+intronic
CAediting_1373335chr19_48699944_+intronic
CAediting_1373336chr19_48700026_+intronic
CAediting_1373337chr19_48700032_+intronic
CAediting_1373338chr19_48700033_+intronic
CAediting_1373339chr19_48700401_+intronic
CAediting_1373340chr19_48700593_+intronic
CAediting_1373341chr19_48701202_+intronic
CAediting_1373342chr19_48701208_+intronic
CAediting_1373343chr19_48701246_+intronic
CAediting_1373344chr19_48701247_+intronic
CAediting_1373345chr19_48701282_+intronic
CAediting_1373346chr19_48701318_+intronic
CAediting_1373347chr19_48701873_+intronic
CAediting_1373348chr19_48701941_+intronic
CAediting_1373349chr19_48702145_+intronic
CAediting_1373350chr19_48702176_+intronic
CAediting_1373351chr19_48702181_+intronic
CAediting_1373352chr19_48702286_+intronic
CAediting_1373353chr19_48702308_+intronic
CAediting_1373354chr19_48702346_+intronic
CAediting_1373355chr19_48704158_+UTR3
CAediting_1373356chr19_48704166_+UTR3
CAediting_1373357chr19_48704167_+UTR3
CAediting_1373358chr19_48704183_+UTR3
CAediting_1373359chr19_48704207_+UTR3
CAediting_1373360chr19_48704212_+UTR3
CAediting_1373361chr19_48704215_+UTR3
CAediting_1373362chr19_48704220_+UTR3
CAediting_1373363chr19_48704221_+UTR3
CAediting_1373364chr19_48704226_+UTR3
CAediting_1373365chr19_48704235_+UTR3
CAediting_1373366chr19_48704236_+UTR3
CAediting_1373367chr19_48704245_+UTR3
CAediting_1373368chr19_48704246_+UTR3
CAediting_1373369chr19_48704266_+UTR3
CAediting_1373370chr19_48704275_+UTR3
CAediting_1373371chr19_48704279_+UTR3
CAediting_1373372chr19_48704293_+UTR3
CAediting_1373373chr19_48704301_+UTR3
CAediting_1373374chr19_48704302_+UTR3
CAediting_1373375chr19_48704307_+UTR3
CAediting_1373376chr19_48704311_+UTR3
CAediting_1373377chr19_48704318_+UTR3
CAediting_1373378chr19_48704324_+UTR3
CAediting_1373379chr19_48704328_+UTR3
CAediting_1373380chr19_48704331_+UTR3
CAediting_1373381chr19_48704334_+UTR3
CAediting_1373382chr19_48704342_+UTR3
CAediting_1373383chr19_48704343_+UTR3
CAediting_1373384chr19_48704347_+UTR3
CAediting_1373385chr19_48704363_+UTR3
CAediting_1373386chr19_48704367_+UTR3
CAediting_1373387chr19_48704371_+UTR3
CAediting_1373388chr19_48704372_+UTR3
CAediting_1373389chr19_48704387_+UTR3
CAediting_1373390chr19_48704404_+UTR3
CAediting_1373391chr19_48704406_+UTR3
CAediting_1373392chr19_48704409_+UTR3
CAediting_1373393chr19_48704410_+UTR3
CAediting_1373394chr19_48704424_+UTR3
CAediting_1373395chr19_48704425_+UTR3
CAediting_1373396chr19_48704428_+UTR3
CAediting_1373397chr19_48704430_+UTR3
CAediting_1373398chr19_48704431_+UTR3
CAediting_1373399chr19_48704438_+UTR3
CAediting_1373400chr19_48704439_+UTR3
CAediting_1373401chr19_48704443_+UTR3
CAediting_1373402chr19_48704444_+UTR3
CAediting_1373403chr19_48704445_+UTR3
CAediting_1373404chr19_48704446_+UTR3
CAediting_1373405chr19_48705154_+UTR3
CAediting_1373406chr19_48705166_+UTR3
CAediting_1373407chr19_48705172_+UTR3
CAediting_1373408chr19_48705175_+UTR3
CAediting_1373409chr19_48705185_+UTR3
CAediting_1373410chr19_48705190_+UTR3
CAediting_1373411chr19_48705204_+UTR3
CAediting_1373412chr19_48705210_+UTR3
CAediting_1373413chr19_48705211_+UTR3
CAediting_1373414chr19_48705215_+UTR3
CAediting_1373415chr19_48705228_+UTR3
CAediting_1373416chr19_48705237_+UTR3
CAediting_1373417chr19_48705240_+UTR3
CAediting_1373418chr19_48705250_+UTR3
CAediting_1373419chr19_48705252_+UTR3
CAediting_1373420chr19_48705263_+UTR3
CAediting_1373421chr19_48705266_+UTR3
CAediting_1373422chr19_48705276_+UTR3
CAediting_1373423chr19_48705277_+UTR3
CAediting_1373424chr19_48705283_+UTR3
CAediting_1373425chr19_48705285_+UTR3
CAediting_1373426chr19_48705291_+UTR3
CAediting_1373427chr19_48705297_+UTR3
CAediting_1373428chr19_48705298_+UTR3
CAediting_1373429chr19_48705302_+UTR3
CAediting_1373430chr19_48705311_+UTR3
CAediting_1373431chr19_48705320_+UTR3
CAediting_1373432chr19_48705331_+UTR3
CAediting_1373433chr19_48705332_+UTR3
CAediting_1373434chr19_48705333_+UTR3
CAediting_1373435chr19_48705340_+UTR3
CAediting_1373436chr19_48705345_+UTR3
CAediting_1373437chr19_48705370_+UTR3
CAediting_1373438chr19_48705371_+UTR3
CAediting_1373439chr19_48705380_+UTR3
CAediting_1373440chr19_48705383_+UTR3
CAediting_1373441chr19_48705392_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1373305chr19_48697082_+SINEAluAluSp
CAediting_1373306chr19_48697160_+SINEAluAluSp
CAediting_1373307chr19_48697290_+SINEAluAluSp
CAediting_1373308chr19_48697896_+SINEAluAluSq2
CAediting_1373309chr19_48698069_+SINEAluAluSx3
CAediting_1373310chr19_48698454_+SINEAluAluSx
CAediting_1373311chr19_48698462_+SINEAluAluSx
CAediting_1373312chr19_48698506_+SINEAluAluSx
CAediting_1373313chr19_48698511_+SINEAluAluSx
CAediting_1373314chr19_48698535_+SINEAluAluSx
CAediting_1373315chr19_48698541_+SINEAluAluSx
CAediting_1373316chr19_48698571_+SINEAluAluSx
CAediting_1373317chr19_48698581_+SINEAluAluSx
CAediting_1373318chr19_48698616_+SINEAluAluSx
CAediting_1373319chr19_48698622_+SINEAluAluSx
CAediting_1373320chr19_48698625_+SINEAluAluSx
CAediting_1373321chr19_48698705_+SINEAluAluSx
CAediting_1373322chr19_48698766_+SINEAluAluJo
CAediting_1373323chr19_48698776_+SINEAluAluJo
CAediting_1373324chr19_48698811_+SINEAluAluJo
CAediting_1373325chr19_48698814_+SINEAluAluJo
CAediting_1373326chr19_48698828_+SINEAluAluJo
CAediting_1373327chr19_48698844_+SINEAluAluJo
CAediting_1373328chr19_48698850_+SINEAluAluJo
CAediting_1373329chr19_48699225_+SINEAluAluSx
CAediting_1373330chr19_48699263_+SINEAluAluSx
CAediting_1373331chr19_48699315_+SINEAluAluSx
CAediting_1373332chr19_48699324_+SINEAluAluSx
CAediting_1373333chr19_48699327_+SINEAluAluSx
CAediting_1373334chr19_48699904_+SINEAluAluSz
CAediting_1373335chr19_48699944_+SINEAluAluSz
CAediting_1373336chr19_48700026_+SINEAluAluSz
CAediting_1373337chr19_48700032_+SINEAluAluSz
CAediting_1373338chr19_48700033_+SINEAluAluSz
CAediting_1373339chr19_48700401_+SINEAluAluY
CAediting_1373340chr19_48700593_+SINEAluAluY
CAediting_1373341chr19_48701202_+SINEAluAluSx1
CAediting_1373342chr19_48701208_+SINEAluAluSx1
CAediting_1373343chr19_48701246_+SINEAluAluSx1
CAediting_1373344chr19_48701247_+SINEAluAluSx1
CAediting_1373345chr19_48701282_+SINEAluAluSx1
CAediting_1373346chr19_48701318_+SINEAluAluSx1
CAediting_1373347chr19_48701873_+SINEAluAluSg
CAediting_1373348chr19_48701941_+SINEAluAluSg
CAediting_1373349chr19_48702145_+SINEAluAluJb
CAediting_1373350chr19_48702176_+SINEAluAluJb
CAediting_1373351chr19_48702181_+SINEAluAluJb
CAediting_1373352chr19_48702286_+SINEAluAluJb
CAediting_1373353chr19_48702308_+SINEAluAluJb
CAediting_1373354chr19_48702346_+SINEAluAluJb
CAediting_1373355chr19_48704158_+SINEAluAluSz
CAediting_1373356chr19_48704166_+SINEAluAluSz
CAediting_1373357chr19_48704167_+SINEAluAluSz
CAediting_1373358chr19_48704183_+SINEAluAluSz
CAediting_1373359chr19_48704207_+SINEAluAluSz
CAediting_1373360chr19_48704212_+SINEAluAluSz
CAediting_1373361chr19_48704215_+SINEAluAluSz
CAediting_1373362chr19_48704220_+SINEAluAluSz
CAediting_1373363chr19_48704221_+SINEAluAluSz
CAediting_1373364chr19_48704226_+SINEAluAluSz
CAediting_1373365chr19_48704235_+SINEAluAluSz
CAediting_1373366chr19_48704236_+SINEAluAluSz
CAediting_1373367chr19_48704245_+SINEAluAluSz
CAediting_1373368chr19_48704246_+SINEAluAluSz
CAediting_1373369chr19_48704266_+SINEAluAluSz
CAediting_1373370chr19_48704275_+SINEAluAluSz
CAediting_1373371chr19_48704279_+SINEAluAluSz
CAediting_1373372chr19_48704293_+SINEAluAluSz
CAediting_1373373chr19_48704301_+SINEAluAluSz
CAediting_1373374chr19_48704302_+SINEAluAluSz
CAediting_1373375chr19_48704307_+SINEAluAluSz
CAediting_1373376chr19_48704311_+SINEAluAluSz
CAediting_1373377chr19_48704318_+SINEAluAluSz
CAediting_1373378chr19_48704324_+SINEAluAluSz
CAediting_1373379chr19_48704328_+SINEAluAluSz
CAediting_1373380chr19_48704331_+SINEAluAluSz
CAediting_1373381chr19_48704334_+SINEAluAluSz
CAediting_1373382chr19_48704342_+SINEAluAluSz
CAediting_1373383chr19_48704343_+SINEAluAluSz
CAediting_1373384chr19_48704347_+SINEAluAluSz
CAediting_1373385chr19_48704363_+SINEAluAluSz
CAediting_1373386chr19_48704367_+SINEAluAluSz
CAediting_1373387chr19_48704371_+SINEAluAluSz
CAediting_1373388chr19_48704372_+SINEAluAluSz
CAediting_1373389chr19_48704387_+SINEAluAluSz
CAediting_1373390chr19_48704404_+SINEAluAluSz
CAediting_1373391chr19_48704406_+SINEAluAluSz
CAediting_1373392chr19_48704409_+SINEAluAluSz
CAediting_1373393chr19_48704410_+SINEAluAluSz
CAediting_1373394chr19_48704424_+SINEAluAluSz
CAediting_1373395chr19_48704425_+SINEAluAluSz
CAediting_1373396chr19_48704428_+SINEAluAluSz
CAediting_1373397chr19_48704430_+SINEAluAluSz
CAediting_1373398chr19_48704431_+SINEAluAluSz
CAediting_1373399chr19_48704438_+SINEAluAluSz
CAediting_1373400chr19_48704439_+SINEAluAluSz
CAediting_1373401chr19_48704443_+SINEAluAluSz
CAediting_1373402chr19_48704444_+SINEAluAluSz
CAediting_1373403chr19_48704445_+SINEAluAluSz
CAediting_1373404chr19_48704446_+SINEAluAluSz
CAediting_1373405chr19_48705154_+SINEAluAluSg
CAediting_1373406chr19_48705166_+SINEAluAluSg
CAediting_1373407chr19_48705172_+SINEAluAluSg
CAediting_1373408chr19_48705175_+SINEAluAluSg
CAediting_1373409chr19_48705185_+SINEAluAluSg
CAediting_1373410chr19_48705190_+SINEAluAluSg
CAediting_1373411chr19_48705204_+SINEAluAluSg
CAediting_1373412chr19_48705210_+SINEAluAluSg
CAediting_1373413chr19_48705211_+SINEAluAluSg
CAediting_1373414chr19_48705215_+SINEAluAluSg
CAediting_1373415chr19_48705228_+SINEAluAluSg
CAediting_1373416chr19_48705237_+SINEAluAluSg
CAediting_1373417chr19_48705240_+SINEAluAluSg
CAediting_1373418chr19_48705250_+SINEAluAluSg
CAediting_1373419chr19_48705252_+SINEAluAluSg
CAediting_1373420chr19_48705263_+SINEAluAluSg
CAediting_1373421chr19_48705266_+SINEAluAluSg
CAediting_1373422chr19_48705276_+SINEAluAluSg
CAediting_1373423chr19_48705277_+SINEAluAluSg
CAediting_1373424chr19_48705283_+SINEAluAluSg
CAediting_1373425chr19_48705285_+SINEAluAluSg
CAediting_1373426chr19_48705291_+SINEAluAluSg
CAediting_1373427chr19_48705297_+SINEAluAluSg
CAediting_1373428chr19_48705298_+SINEAluAluSg
CAediting_1373429chr19_48705302_+SINEAluAluSg
CAediting_1373430chr19_48705311_+SINEAluAluSg
CAediting_1373431chr19_48705320_+SINEAluAluSg
CAediting_1373432chr19_48705331_+SINEAluAluSg
CAediting_1373433chr19_48705332_+SINEAluAluSg
CAediting_1373434chr19_48705333_+SINEAluAluSg
CAediting_1373435chr19_48705340_+SINEAluAluSg
CAediting_1373436chr19_48705345_+SINEAluAluSg
CAediting_1373437chr19_48705370_+SINEAluAluSg
CAediting_1373438chr19_48705371_+SINEAluAluSg
CAediting_1373439chr19_48705380_+SINEAluAluSg
CAediting_1373440chr19_48705383_+SINEAluAluSg
CAediting_1373441chr19_48705392_+SINEAluAluSg

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RNA A-to-I editing events in the alternative splicing sites for FUT2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_1373437chr19_48705370_+48705351:487053733SS0+1iCGCCTTCCTCGGCCTCCCAAAGT-1.06CGCCTTCCTCGGCCTCCCAGAGT7.69
IRCAediting_1373438chr19_48705371_+48705351:487053733SS1+0iCGCCTTCCTCGGCCTCCCAAAGT-1.06CGCCTTCCTCGGCCTCCCAAGGT-0.35

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000176920.11.FUT2.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000176920.11.FUT2.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FUT2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
COAD.CAediting_1373388.ENSG00000176920.FUT2.png
Soverview

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Protein coding region RNA A-to-I editings for FUT2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for FUT2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1373356chr19_48704166_+ENSG00000176920.11ENST00000391876hsa-miR-513a-5p48704160487041667mer-m84870415048704167152.00-17.32
CAediting_1373356chr19_48704166_+ENSG00000176920.11ENST00000391876hsa-miR-513a-5p48704160487041667mer-m84870415048704167152.00-17.32
CAediting_1373356chr19_48704166_+ENSG00000176920.11ENST00000391876hsa-miR-7112-3p48704163487041697mer-m84870414848704170167.00-22.76
CAediting_1373358chr19_48704183_+ENSG00000176920.11ENST00000391876hsa-miR-4758-3p48704179487041857mer-m84870416248704186143.00-18.10
CAediting_1373358chr19_48704183_+ENSG00000176920.11ENST00000391876hsa-miR-874-5p48704180487041878mer-1a4870416548704187148.00-24.22
CAediting_1373437chr19_48705370_+ENSG00000176920.11ENST00000391876hsa-miR-32648705365487053717mer-m84870535348705372140.00-13.37
CAediting_1373437chr19_48705370_+ENSG00000176920.11ENST00000391876hsa-miR-330-5p48705365487053717mer-m84870535148705372140.00-21.18
CAediting_1373437chr19_48705370_+ENSG00000176920.11ENST00000391876hsa-miR-431448705364487053707mer-m84870535448705371140.00-21.25
CAediting_1373437chr19_48705370_+ENSG00000176920.11ENST00000391876hsa-miR-514a-5p48705366487053727mer-m84870535048705373146.00-18.62
CAediting_1373437chr19_48705370_+ENSG00000176920.11ENST00000391876hsa-miR-514a-5p48705366487053727mer-m84870535048705373146.00-18.62
CAediting_1373437chr19_48705370_+ENSG00000176920.11ENST00000391876hsa-miR-514a-5p48705366487053727mer-m84870535048705373146.00-18.62
CAediting_1373438chr19_48705371_+ENSG00000176920.11ENST00000391876hsa-miR-3189-3p48705365487053717mer-m84870535048705372149.00-22.57
CAediting_1373438chr19_48705371_+ENSG00000176920.11ENST00000391876hsa-miR-6813-3p48705366487053727mer-m84870535348705373140.00-11.13
CAediting_1373440chr19_48705383_+ENSG00000176920.11ENST00000391876hsa-miR-106a-3p48705379487053846mer4870536448705385141.00-21.13
CAediting_1373433chr19_48705332_+ENSG00000176920.11ENST00000391876hsa-miR-429448705330487053367mer-m84870532048705337150.00-18.29
CAediting_1373434chr19_48705333_+ENSG00000176920.11ENST00000391876hsa-miR-28-5p48705331487053377mer-m84870531848705338143.00-18.76
CAediting_1373434chr19_48705333_+ENSG00000176920.11ENST00000391876hsa-miR-313948705331487053377mer-m84870531648705338157.00-23.72
CAediting_1373434chr19_48705333_+ENSG00000176920.11ENST00000391876hsa-miR-708-5p48705331487053377mer-m84870531748705338154.00-20.89
CAediting_1373441chr19_48705392_+ENSG00000176920.11ENST00000391876hsa-miR-548s48705389487053957mer-m84870537348705396157.00-17.17
CAediting_1373355chr19_48704158_+ENSG00000176920.11ENST00000391876hsa-miR-3622a-5p48704156487041627mer-m84870414248704163151.00-28.38

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1373356chr19_48704166_+ENSG00000176920.11ENST00000391876hsa-miR-10399-5p48704161487041677mer-m84870414748704168144-10.06
CAediting_1373357chr19_48704167_+ENSG00000176920.11ENST00000391876hsa-miR-10399-5p48704161487041677mer-m84870414748704168144-10.06
CAediting_1373358chr19_48704183_+ENSG00000176920.11ENST00000391876hsa-miR-513b-5p48704177487041826mer4870416248704183143-17.61
CAediting_1373355chr19_48704158_+ENSG00000176920.11ENST00000391876hsa-miR-6807-5p48704151487041577mer-m84870413748704158140-17.36
CAediting_1373358chr19_48704183_+ENSG00000176920.11ENST00000391876hsa-miR-6878-3p48704181487041877mer-m84870416848704188140-16.75
CAediting_1373356chr19_48704166_+ENSG00000176920.11ENST00000391876hsa-miR-7151-3p48704159487041668mer-1a4870415048704166146-17.62
CAediting_1373436chr19_48705345_+ENSG00000176920.11ENST00000391876hsa-miR-2681-3p48705343487053486mer4870532848705349140-12.81
CAediting_1373439chr19_48705380_+ENSG00000176920.11ENST00000391876hsa-miR-797748705373487053797mer-m84870536348705380140-13.07
CAediting_1373437chr19_48705370_+ENSG00000176920.11ENST00000391876hsa-miR-887-5p48705363487053708mer-1a4870535048705370147-14.77

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_396018chr5_1062918_-ENSG00000176920.11ENST00000391876hsa-miR-463548704029487040368mer-1a4870401648704036140-16.15
CAediting_1229415chr17_67471547_+ENSG00000176920.11ENST00000391876hsa-miR-548aa48705532487055387mer-m84870551548705539149-9.42

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FUT2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for FUT2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_1373356chr19_48704166_+1.81489056197067e-060.462812246827149....
LUADCAediting_1373356chr19_48704166_+0.0142223823622320.323118098712332....
CESCCAediting_1373370chr19_48704275_+5.76241335955493e-050.431543670151439....
LUADCAediting_1373370chr19_48704275_+0.0007231173527972840.327850890992918....
STADCAediting_1373373chr19_48704301_+..0.005438074193980950.2694755927027130.02315767518609810.221500785527022
STADCAediting_1373375chr19_48704307_+....0.001966336150329320.354110480984174
ESCACAediting_1373384chr19_48704347_+..0.0478171023466710.273154673277473..
BRCACAediting_1373388chr19_48704372_+0.01860560117209760.232675347708942....
CESCCAediting_1373388chr19_48704372_+1.65187371667794e-060.436721262934309....
LUADCAediting_1373388chr19_48704372_+7.43454655770695e-060.361335886807084....
COADCAediting_1373388chr19_48704372_+0.02696071541827050.172231044284123....
LUSCCAediting_1373388chr19_48704372_+0.0001649971812876770.4383609119803820.008821623776253860.313029814435960.02721058399259480.265921359518092
HNSCCAediting_1373388chr19_48704372_+1.96379281480466e-050.328585346113809....
STADCAediting_1373388chr19_48704372_+1.42364809102074e-060.330101530329524....
PAADCAediting_1373388chr19_48704372_+0.03902878480525670.249082054478821....
BRCACAediting_1373390chr19_48704404_+0.0001412014168408650.486984082228705....
CESCCAediting_1373390chr19_48704404_+0.000114241901228310.404062424029253....
LUADCAediting_1373390chr19_48704404_+0.002034994091276260.295042309240962....
COADCAediting_1373390chr19_48704404_+0.001195198011921320.292343037849152....
HNSCCAediting_1373390chr19_48704404_+0.02943729210426260.209642864144258....
STADCAediting_1373390chr19_48704404_+4.21654881146304e-110.4358664812313580.006071951378958350.189214704963979..
ESCACAediting_1373390chr19_48704404_+0.02597583127600880.3029280565675360.02457408849403360.305707294124168..
PAADCAediting_1373390chr19_48704404_+0.03369708864588540.295081777159993....
LUADCAediting_1373391chr19_48704406_+0.03288518753369130.299281914006406....
STADCAediting_1373391chr19_48704406_+0.0002133314909442480.4050371342525280.0001595713367715760.412307947551119..
STADCAediting_1373393chr19_48704410_+....0.02455370545732460.235619703271868
STADCAediting_1373417chr19_48705240_+0.03349722346334710.247505220406803....
STADCAediting_1373418chr19_48705250_+1.49845636336653e-060.40175960815982....
BRCACAediting_1373424chr19_48705283_+0.0001479827347433790.336901031112108....
CESCCAediting_1373424chr19_48705283_+3.3169759220515e-060.382751167845397....
LUADCAediting_1373424chr19_48705283_+0.002986847479464670.25007889163297....
COADCAediting_1373424chr19_48705283_+5.57106909244193e-070.32159405526755....
LUSCCAediting_1373424chr19_48705283_+7.45246984303391e-050.389250343236763..0.04706498845993240.201113411761548
STADCAediting_1373424chr19_48705283_+0.004159065065876740.183982967591073....
UCECCAediting_1373424chr19_48705283_+0.001110060601502480.291791730559285....
OVCAediting_1373424chr19_48705283_+0.005494082803652540.282771936062149....
PAADCAediting_1373424chr19_48705283_+0.0004901937352581530.3680128391069370.01872119817998220.253080058656661..
READCAediting_1373424chr19_48705283_+0.009014176889138880.293880350200288....
LUADCAediting_1373426chr19_48705291_+0.04222831898597160.260950010271566....
STADCAediting_1373426chr19_48705291_+1.96667265730646e-050.351097596909335....
LUADCAediting_1373427chr19_48705297_+0.01223306776325860.287973046724485....
STADCAediting_1373427chr19_48705297_+0.0007881013299018810.2207824997454850.02605805793869810.147381428080766..
ESCACAediting_1373427chr19_48705297_+0.01222607978093450.249711817204089....
BRCACAediting_1373437chr19_48705370_+8.25662774355348e-070.369508576083285....
CESCCAediting_1373437chr19_48705370_+0.03985936449924620.255624427726608....
LUADCAediting_1373437chr19_48705370_+0.002241271572633320.30373072408045....
STADCAediting_1373437chr19_48705370_+2.68509694925859e-060.392727550342134....
UCECCAediting_1373437chr19_48705370_+....0.0383969257763850.246306336677693
OVCAediting_1373437chr19_48705370_+0.0121533787150390.2844958412712980.02601795391711780.253654477356539..
BLCACAediting_1373438chr19_48705371_+0.0001067105707273370.392970809809208....
BRCACAediting_1373438chr19_48705371_+8.87558776051386e-120.356524780323143....
CESCCAediting_1373438chr19_48705371_+2.55755418048497e-050.328184918731954....
LUADCAediting_1373438chr19_48705371_+2.96185317676522e-100.398551374710539....
COADCAediting_1373438chr19_48705371_+2.48451321025793e-090.4003546215049020.004786577356209040.195837127970522..
HNSCCAediting_1373438chr19_48705371_+9.76298680456469e-060.280584627364247....
STADCAediting_1373438chr19_48705371_+7.3399070132796e-090.355510003336216....
UCECCAediting_1373438chr19_48705371_+2.01940666964036e-050.304684966943279....
OVCAediting_1373438chr19_48705371_+4.18706196444989e-050.353805521514041....
PAADCAediting_1373438chr19_48705371_+4.12309131931091e-050.392484997597262....
BRCACAediting_1373440chr19_48705383_+3.90129569801166e-080.43291216465014....
HNSCCAediting_1373440chr19_48705383_+..0.0129281885927680.324570030521496..
STADCAediting_1373440chr19_48705383_+9.23519401972219e-050.413534903154896....
UCECCAediting_1373440chr19_48705383_+....0.01965976041418820.328983997799158
OVCAediting_1373440chr19_48705383_+0.0001014280318295080.4258583278960260.04029833512801670.23275201692374..

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Relation with cancer stages for FUT2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
CESCclinical_stageCAediting_1373370chr19_48704275_+0.002381411793159110.337111923722197
CESCclinical_stageCAediting_1373427chr19_48705297_+0.02419636431264690.265495922826136
CESCclinical_stageCAediting_1373438chr19_48705371_+0.0188437313760453-0.187274380019764
STADpathologic_stageCAediting_1373363chr19_48704221_+0.02236579848997990.246100610006516
STADpathologic_stageCAediting_1373388chr19_48704372_+0.03351738008248410.151164057852837
UCECclinical_stageCAediting_1373438chr19_48705371_+0.04370825884508480.146884018485004

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Relation with survival for FUT2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
OVCAediting_1373440chr19_48705383_+0.008133665508167740.0424748115.188

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RelatedDrugs for FUT2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for FUT2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
FUT2C0010346Crohn Disease1CTD_human
FUT2C0156147Crohn's disease of large bowel1CTD_human
FUT2C0162677Caliciviridae Infections1CTD_human
FUT2C0206044Infections, Calicivirus1CTD_human
FUT2C0267380Crohn's disease of the ileum1CTD_human
FUT2C0678202Regional enteritis1CTD_human
FUT2C0949272IIeocolitis1CTD_human
FUT2C3534585Infection caused by Norovirus1CTD_human