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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ZKSCAN5 (CAeditome ID:23660)

Gene summary for ZKSCAN5

check button Gene summary
Gene informationGene symbol

ZKSCAN5

Gene ID

23660

Gene namezinc finger with KRAB and SCAN domains 5
SynonymsZFP-95|ZFP95|ZNF914|ZSCAN37
Cytomap

7q22.1

Type of geneprotein-coding
Descriptionzinc finger protein with KRAB and SCAN domains 5zinc finger protein 95 homologzinc finger protein homologous to Zfp95 in mouse
Modification date20210518
UniProtAcc

Q9Y2L8

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for ZKSCAN5

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000196652.10

check button RNA A-to-I editing events in Cancer.
CAediting_578331(99506393, +), CAediting_578332(99507779, +), CAediting_578333(99507783, +), CAediting_578334(99507800, +), CAediting_578335(99508179, +), CAediting_578336(99508573, +), CAediting_578337(99509307, +), CAediting_578338(99509968, +), CAediting_578339(99510065, +), CAediting_578340(99510810, +), CAediting_578341(99510834, +), CAediting_578342(99510871, +), CAediting_578343(99510954, +), CAediting_578344(99511483, +), CAediting_578345(99511492, +), CAediting_578346(99511543, +), CAediting_578347(99511568, +), CAediting_578348(99511584, +), CAediting_578349(99512054, +), CAediting_578350(99513827, +), CAediting_578351(99514937, +), CAediting_578352(99515286, +), CAediting_578353(99515296, +), CAediting_578354(99515316, +), CAediting_578355(99515746, +), CAediting_578356(99516077, +), CAediting_578357(99516078, +), CAediting_578358(99516123, +), CAediting_578359(99517191, +), CAediting_578360(99517192, +), CAediting_578361(99517292, +), CAediting_578362(99518157, +), CAediting_578363(99518173, +), CAediting_578364(99518179, +), CAediting_578365(99518301, +), CAediting_578366(99518310, +), CAediting_578367(99519371, +), CAediting_578368(99520731, +), CAediting_578369(99520798, +), CAediting_578370(99520799, +), CAediting_578371(99520829, +), CAediting_578372(99520853, +), CAediting_578373(99521359, +), CAediting_578374(99521387, +), CAediting_578375(99522548, +), CAediting_578376(99522697, +), CAediting_578377(99522761, +), CAediting_578378(99522950, +), CAediting_578379(99522955, +), CAediting_578380(99523006, +), CAediting_578381(99523061, +), CAediting_578382(99523066, +), CAediting_578383(99523070, +), CAediting_578384(99523076, +), CAediting_578385(99523097, +), CAediting_578386(99523105, +), CAediting_578387(99523109, +), CAediting_578388(99523119, +), CAediting_578389(99523139, +), CAediting_578390(99523367, +), CAediting_578391(99523388, +), CAediting_578392(99523541, +), CAediting_578393(99523550, +), CAediting_578394(99524210, +), CAediting_578395(99524944, +), CAediting_578396(99525019, +), CAediting_578397(99525045, +), CAediting_578398(99525078, +), CAediting_578399(99525081, +), CAediting_578400(99525290, +), CAediting_578401(99525314, +), CAediting_578402(99525322, +), CAediting_578403(99525325, +), CAediting_578404(99525351, +), CAediting_578405(99525361, +), CAediting_578406(99525398, +), CAediting_578407(99525421, +), CAediting_578408(99526624, +), CAediting_578409(99526672, +), CAediting_578410(99526680, +), CAediting_578411(99526696, +), CAediting_578412(99526735, +), CAediting_578413(99526738, +), CAediting_578414(99526744, +), CAediting_578415(99527172, +), CAediting_578416(99527184, +), CAediting_578417(99527250, +), CAediting_578418(99528496, +), CAediting_578419(99528655, +), CAediting_578420(99528695, +), CAediting_578421(99534256, +), CAediting_578422(99534271, +), CAediting_578423(99534272, +), CAediting_578424(99534277, +), CAediting_578425(99534282, +), CAediting_578426(99534287, +), CAediting_578427(99534349, +), CAediting_578428(99534394, +), CAediting_578429(99534420, +), CAediting_578430(99534421, +), CAediting_578431(99534465, +), CAediting_578432(99534502, +), CAediting_578433(99534541, +), CAediting_578434(99534555, +), CAediting_578435(99534598, +), CAediting_578436(99534599, +), CAediting_578437(99534610, +), CAediting_578438(99534619, +), CAediting_578439(99534623, +), CAediting_578440(99534628, +), CAediting_578441(99534633, +),

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RNA editing positional annotations for ZKSCAN5 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_578331chr7_99506393_+nonsynonymous SNVENST00000326775.8c.A349Gp.S117GDBD
CAediting_578331chr7_99506393_+nonsynonymous SNVENST00000394170.5c.A349Gp.S117GDBD
CAediting_578331chr7_99506393_+nonsynonymous SNVENST00000451158.4c.A349Gp.S117GDBD
CAediting_578331chr7_99506393_+nonsynonymous SNVENST00000454175.1c.A349Gp.S117GDBD

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_578331chr7_99506393_+exonic
CAediting_578332chr7_99507779_+intronic
CAediting_578333chr7_99507783_+intronic
CAediting_578334chr7_99507800_+intronic
CAediting_578335chr7_99508179_+intronic
CAediting_578336chr7_99508573_+intronic
CAediting_578337chr7_99509307_+intronic
CAediting_578338chr7_99509968_+intronic
CAediting_578339chr7_99510065_+intronic
CAediting_578340chr7_99510810_+intronic
CAediting_578341chr7_99510834_+intronic
CAediting_578342chr7_99510871_+intronic
CAediting_578343chr7_99510954_+intronic
CAediting_578344chr7_99511483_+intronic
CAediting_578345chr7_99511492_+intronic
CAediting_578346chr7_99511543_+intronic
CAediting_578347chr7_99511568_+intronic
CAediting_578348chr7_99511584_+intronic
CAediting_578349chr7_99512054_+intronic
CAediting_578350chr7_99513827_+intronic
CAediting_578351chr7_99514937_+intronic
CAediting_578352chr7_99515286_+intronic
CAediting_578353chr7_99515296_+intronic
CAediting_578354chr7_99515316_+intronic
CAediting_578355chr7_99515746_+intronic
CAediting_578356chr7_99516077_+intronic
CAediting_578357chr7_99516078_+intronic
CAediting_578358chr7_99516123_+intronic
CAediting_578359chr7_99517191_+intronic
CAediting_578360chr7_99517192_+intronic
CAediting_578361chr7_99517292_+intronic
CAediting_578362chr7_99518157_+intronic
CAediting_578363chr7_99518173_+intronic
CAediting_578364chr7_99518179_+intronic
CAediting_578365chr7_99518301_+intronic
CAediting_578366chr7_99518310_+intronic
CAediting_578367chr7_99519371_+intronic
CAediting_578368chr7_99520731_+intronic
CAediting_578369chr7_99520798_+intronic
CAediting_578370chr7_99520799_+intronic
CAediting_578371chr7_99520829_+intronic
CAediting_578372chr7_99520853_+intronic
CAediting_578373chr7_99521359_+intronic
CAediting_578374chr7_99521387_+intronic
CAediting_578375chr7_99522548_+intronic
CAediting_578376chr7_99522697_+intronic
CAediting_578377chr7_99522761_+intronic
CAediting_578378chr7_99522950_+intronic
CAediting_578379chr7_99522955_+intronic
CAediting_578380chr7_99523006_+intronic
CAediting_578381chr7_99523061_+intronic
CAediting_578382chr7_99523066_+intronic
CAediting_578383chr7_99523070_+intronic
CAediting_578384chr7_99523076_+intronic
CAediting_578385chr7_99523097_+intronic
CAediting_578386chr7_99523105_+intronic
CAediting_578387chr7_99523109_+intronic
CAediting_578388chr7_99523119_+intronic
CAediting_578389chr7_99523139_+intronic
CAediting_578390chr7_99523367_+intronic
CAediting_578391chr7_99523388_+intronic
CAediting_578392chr7_99523541_+intronic
CAediting_578393chr7_99523550_+intronic
CAediting_578394chr7_99524210_+intronic
CAediting_578395chr7_99524944_+intronic
CAediting_578396chr7_99525019_+intronic
CAediting_578397chr7_99525045_+intronic
CAediting_578398chr7_99525078_+intronic
CAediting_578399chr7_99525081_+intronic
CAediting_578400chr7_99525290_+intronic
CAediting_578401chr7_99525314_+intronic
CAediting_578402chr7_99525322_+intronic
CAediting_578403chr7_99525325_+intronic
CAediting_578404chr7_99525351_+intronic
CAediting_578405chr7_99525361_+intronic
CAediting_578406chr7_99525398_+intronic
CAediting_578407chr7_99525421_+intronic
CAediting_578408chr7_99526624_+intronic
CAediting_578409chr7_99526672_+intronic
CAediting_578410chr7_99526680_+intronic
CAediting_578411chr7_99526696_+intronic
CAediting_578412chr7_99526735_+intronic
CAediting_578413chr7_99526738_+intronic
CAediting_578414chr7_99526744_+intronic
CAediting_578415chr7_99527172_+intronic
CAediting_578416chr7_99527184_+intronic
CAediting_578417chr7_99527250_+intronic
CAediting_578418chr7_99528496_+intronic
CAediting_578419chr7_99528655_+intronic
CAediting_578420chr7_99528695_+intronic
CAediting_578421chr7_99534256_+UTR3
CAediting_578422chr7_99534271_+UTR3
CAediting_578423chr7_99534272_+UTR3
CAediting_578424chr7_99534277_+UTR3
CAediting_578425chr7_99534282_+UTR3
CAediting_578426chr7_99534287_+UTR3
CAediting_578427chr7_99534349_+UTR3
CAediting_578428chr7_99534394_+UTR3
CAediting_578429chr7_99534420_+UTR3
CAediting_578430chr7_99534421_+UTR3
CAediting_578431chr7_99534465_+UTR3
CAediting_578432chr7_99534502_+UTR3
CAediting_578433chr7_99534541_+UTR3
CAediting_578434chr7_99534555_+UTR3
CAediting_578435chr7_99534598_+UTR3
CAediting_578436chr7_99534599_+UTR3
CAediting_578437chr7_99534610_+UTR3
CAediting_578438chr7_99534619_+UTR3
CAediting_578439chr7_99534623_+UTR3
CAediting_578440chr7_99534628_+UTR3
CAediting_578441chr7_99534633_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_578332chr7_99507779_+SINEAluAluJo
CAediting_578333chr7_99507783_+SINEAluAluJo
CAediting_578334chr7_99507800_+SINEAluAluJo
CAediting_578335chr7_99508179_+SINEAluAluSc5
CAediting_578336chr7_99508573_+SINEAluAluSc
CAediting_578337chr7_99509307_+SINEAluAluSx
CAediting_578338chr7_99509968_+SINEAluAluJo
CAediting_578339chr7_99510065_+SINEAluAluJo
CAediting_578340chr7_99510810_+SINEAluAluSz
CAediting_578341chr7_99510834_+SINEAluAluSz
CAediting_578342chr7_99510871_+SINEAluAluSz
CAediting_578343chr7_99510954_+SINEAluAluSz
CAediting_578344chr7_99511483_+SINEAluAluJo
CAediting_578345chr7_99511492_+SINEAluAluJo
CAediting_578346chr7_99511543_+SINEAluAluJo
CAediting_578347chr7_99511568_+SINEAluAluJo
CAediting_578348chr7_99511584_+SINEAluAluJo
CAediting_578349chr7_99512054_+SINEAluAluY
CAediting_578350chr7_99513827_+SINEAluAluSq
CAediting_578351chr7_99514937_+SINEAluAluJo
CAediting_578352chr7_99515286_+SINEAluAluSx
CAediting_578353chr7_99515296_+SINEAluAluSx
CAediting_578354chr7_99515316_+SINEAluAluSx
CAediting_578355chr7_99515746_+SINEAluAluSx1
CAediting_578356chr7_99516077_+SINEAluAluSx
CAediting_578357chr7_99516078_+SINEAluAluSx
CAediting_578358chr7_99516123_+SINEAluAluSx
CAediting_578359chr7_99517191_+SINEAluAluSp
CAediting_578360chr7_99517192_+SINEAluAluSp
CAediting_578361chr7_99517292_+SINEAluAluSp
CAediting_578362chr7_99518157_+SINEAluAluSx
CAediting_578363chr7_99518173_+SINEAluAluSx
CAediting_578364chr7_99518179_+SINEAluAluSx
CAediting_578365chr7_99518301_+SINEAluAluSx
CAediting_578366chr7_99518310_+SINEAluAluSx
CAediting_578367chr7_99519371_+SINEAluAluSz6
CAediting_578368chr7_99520731_+SINEAluAluSx1
CAediting_578369chr7_99520798_+SINEAluAluSx1
CAediting_578370chr7_99520799_+SINEAluAluSx1
CAediting_578371chr7_99520829_+SINEAluAluSx1
CAediting_578372chr7_99520853_+SINEAluAluSx1
CAediting_578373chr7_99521359_+SINEAluAluSg
CAediting_578374chr7_99521387_+SINEAluAluSg
CAediting_578375chr7_99522548_+SINEAluAluSx1
CAediting_578376chr7_99522697_+SINEAluAluSx1
CAediting_578377chr7_99522761_+SINEAluAluSx1
CAediting_578378chr7_99522950_+SINEAluAluSz6
CAediting_578379chr7_99522955_+SINEAluAluSz6
CAediting_578380chr7_99523006_+SINEAluAluSz6
CAediting_578381chr7_99523061_+SINEAluAluSz6
CAediting_578382chr7_99523066_+SINEAluAluSz6
CAediting_578383chr7_99523070_+SINEAluAluSz6
CAediting_578384chr7_99523076_+SINEAluAluSz6
CAediting_578385chr7_99523097_+SINEAluAluSz6
CAediting_578386chr7_99523105_+SINEAluAluSz6
CAediting_578387chr7_99523109_+SINEAluAluSz6
CAediting_578388chr7_99523119_+SINEAluAluSz6
CAediting_578389chr7_99523139_+SINEAluAluSz6
CAediting_578390chr7_99523367_+SINEAluAluJr
CAediting_578391chr7_99523388_+SINEAluAluJr
CAediting_578392chr7_99523541_+SINEAluAluJr
CAediting_578393chr7_99523550_+SINEAluAluJr
CAediting_578394chr7_99524210_+SINEAluAluSz
CAediting_578395chr7_99524944_+SINEAluAluSx4
CAediting_578396chr7_99525019_+SINEAluAluSx4
CAediting_578397chr7_99525045_+SINEAluAluSx4
CAediting_578398chr7_99525078_+SINEAluAluSx4
CAediting_578399chr7_99525081_+SINEAluAluSx4
CAediting_578400chr7_99525290_+SINEAluAluJb
CAediting_578401chr7_99525314_+SINEAluAluJb
CAediting_578402chr7_99525322_+SINEAluAluJb
CAediting_578403chr7_99525325_+SINEAluAluJb
CAediting_578404chr7_99525351_+SINEAluAluJb
CAediting_578405chr7_99525361_+SINEAluAluJb
CAediting_578406chr7_99525398_+SINEAluAluJb
CAediting_578407chr7_99525421_+SINEAluAluJb
CAediting_578408chr7_99526624_+SINEAluAluSx
CAediting_578409chr7_99526672_+SINEAluAluSx
CAediting_578410chr7_99526680_+SINEAluAluSx
CAediting_578411chr7_99526696_+SINEAluAluSx
CAediting_578412chr7_99526735_+SINEAluAluSx
CAediting_578413chr7_99526738_+SINEAluAluSx
CAediting_578414chr7_99526744_+SINEAluAluSx
CAediting_578415chr7_99527172_+SINEAluAluJr
CAediting_578416chr7_99527184_+SINEAluAluJr
CAediting_578417chr7_99527250_+SINEAluAluJr
CAediting_578418chr7_99528496_+SINEAluAluJo
CAediting_578419chr7_99528655_+SINEAluAluJo
CAediting_578420chr7_99528695_+SINEAluAluJo
CAediting_578421chr7_99534256_+SINEAluAluJb
CAediting_578422chr7_99534271_+SINEAluAluJb
CAediting_578423chr7_99534272_+SINEAluAluJb
CAediting_578424chr7_99534277_+SINEAluAluJb
CAediting_578425chr7_99534282_+SINEAluAluJb
CAediting_578426chr7_99534287_+SINEAluAluJb
CAediting_578427chr7_99534349_+SINEAluAluJb
CAediting_578428chr7_99534394_+SINEAluAluJb
CAediting_578429chr7_99534420_+SINEAluAluSc
CAediting_578430chr7_99534421_+SINEAluAluSc
CAediting_578431chr7_99534465_+SINEAluAluSc
CAediting_578432chr7_99534502_+SINEAluAluSc
CAediting_578433chr7_99534541_+SINEAluAluSc
CAediting_578434chr7_99534555_+SINEAluAluSc
CAediting_578435chr7_99534598_+SINEAluAluSc
CAediting_578436chr7_99534599_+SINEAluAluSc
CAediting_578437chr7_99534610_+SINEAluAluSc
CAediting_578438chr7_99534619_+SINEAluAluSc
CAediting_578439chr7_99534623_+SINEAluAluSc
CAediting_578440chr7_99534628_+SINEAluAluSc
CAediting_578441chr7_99534633_+SINEAluAluSc

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RNA A-to-I editing events in the alternative splicing sites for ZKSCAN5

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000196652.10.ZKSCAN5.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000196652.10.ZKSCAN5.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZKSCAN5

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZKSCAN5

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for ZKSCAN5

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_578421chr7_99534256_+ENSG00000196652.10ENST00000454175hsa-miR-508-5p99534253995342597mer-m89953423699534260152.00-24.31
CAediting_578421chr7_99534256_+ENSG00000196652.10ENST00000454175hsa-miR-6512-3p99534251995342577mer-m89953423799534258140.00-19.33
CAediting_578421chr7_99534256_+ENSG00000196652.10ENST00000454175hsa-miR-6720-5p99534251995342577mer-m89953423699534258155.00-27.64
CAediting_578421chr7_99534256_+ENSG00000196652.10ENST00000454175hsa-miR-6849-3p99534250995342578mer-1a9953423699534257148.00-18.13
CAediting_578421chr7_99534256_+ENSG00000196652.10ENST00000454175hsa-miR-766-3p99534252995342587mer-m89953423799534259147.00-24.89
CAediting_578423chr7_99534272_+ENSG00000196652.10ENST00000454175hsa-miR-134-5p99534269995342768mer-1a9953425599534276142.00-17.29
CAediting_578423chr7_99534272_+ENSG00000196652.10ENST00000454175hsa-miR-311899534269995342768mer-1a9953425399534276160.00-27.49
CAediting_578423chr7_99534272_+ENSG00000196652.10ENST00000454175hsa-miR-311899534269995342768mer-1a9953425399534276160.00-27.49
CAediting_578423chr7_99534272_+ENSG00000196652.10ENST00000454175hsa-miR-311899534269995342768mer-1a9953425399534276160.00-27.49
CAediting_578423chr7_99534272_+ENSG00000196652.10ENST00000454175hsa-miR-311899534269995342768mer-1a9953425399534276160.00-27.49
CAediting_578428chr7_99534394_+ENSG00000196652.10ENST00000454175hsa-miR-397399534387995343937mer-m89953437299534394140.00-6.54
CAediting_578429chr7_99534420_+ENSG00000196652.10ENST00000454175hsa-miR-23a-5p99534419995344257mer-1a9953440499534425142.00-25.40
CAediting_578430chr7_99534421_+ENSG00000196652.10ENST00000454175hsa-miR-4796-5p99534416995344227mer-m89953439999534423144.00-12.99
CAediting_578431chr7_99534465_+ENSG00000196652.10ENST00000454175hsa-miR-378a-5p99534460995344667mer-m89953444699534467153.00-23.97
CAediting_578432chr7_99534502_+ENSG00000196652.10ENST00000454175hsa-miR-412-3p99534495995345017mer-m89953448099534502149.00-17.83
CAediting_578432chr7_99534502_+ENSG00000196652.10ENST00000454175hsa-miR-6754-3p99534495995345017mer-m89953448099534502141.00-14.59
CAediting_578433chr7_99534541_+ENSG00000196652.10ENST00000454175hsa-miR-6872-3p99534535995345417mer-m89953452299534542141.00-13.85
CAediting_578434chr7_99534555_+ENSG00000196652.10ENST00000454175hsa-miR-7151-3p99534550995345567mer-m89953454199534557142.00-19.90
CAediting_578436chr7_99534599_+ENSG00000196652.10ENST00000454175hsa-miR-443799534595995346017mer-m89953458299534602146.00-19.53
CAediting_578437chr7_99534610_+ENSG00000196652.10ENST00000454175hsa-miR-128199534603995346097mer-m89953459499534610141.00-16.88
CAediting_578438chr7_99534619_+ENSG00000196652.10ENST00000454175hsa-miR-6511a-3p99534618995346236mer9953460399534624144.00-26.09
CAediting_578438chr7_99534619_+ENSG00000196652.10ENST00000454175hsa-miR-6511a-3p99534618995346236mer9953460399534624144.00-26.09
CAediting_578438chr7_99534619_+ENSG00000196652.10ENST00000454175hsa-miR-6511a-3p99534618995346236mer9953460399534624144.00-26.09
CAediting_578438chr7_99534619_+ENSG00000196652.10ENST00000454175hsa-miR-6511a-3p99534618995346236mer9953460399534624144.00-26.09
CAediting_578438chr7_99534619_+ENSG00000196652.10ENST00000454175hsa-miR-6511b-3p99534618995346236mer9953460299534624148.00-28.97
CAediting_578438chr7_99534619_+ENSG00000196652.10ENST00000454175hsa-miR-6511b-3p99534618995346236mer9953460299534624148.00-28.97
CAediting_578438chr7_99534619_+ENSG00000196652.10ENST00000454175hsa-miR-6784-3p99534618995346236mer9953460299534624151.00-31.20
CAediting_578439chr7_99534623_+ENSG00000196652.10ENST00000454175hsa-miR-324-3p99534616995346227mer-m89953460199534623149.00-24.32
CAediting_578439chr7_99534623_+ENSG00000196652.10ENST00000454175hsa-miR-4690-3p99534620995346278mer-1a9953460899534627165.00-31.39
CAediting_578439chr7_99534623_+ENSG00000196652.10ENST00000454175hsa-miR-568599534620995346278mer-1a9953460799534627149.00-19.15
CAediting_578440chr7_99534628_+ENSG00000196652.10ENST00000454175hsa-miR-426799534621995346277mer-m89953461399534628148.00-20.54
CAediting_578440chr7_99534628_+ENSG00000196652.10ENST00000454175hsa-miR-797799534623995346297mer-m89953461299534630150.00-21.06
CAediting_578441chr7_99534633_+ENSG00000196652.10ENST00000454175hsa-miR-463499534630995346378mer-1a9953461799534637146.00-21.85

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_578421chr7_99534256_+ENSG00000196652.10ENST00000454175hsa-miR-1251-5p99534252995342587mer-m89953423799534259142-18.47
CAediting_578421chr7_99534256_+ENSG00000196652.10ENST00000454175hsa-miR-1287-3p99534251995342577mer-m89953423799534258152-21.79
CAediting_578426chr7_99534287_+ENSG00000196652.10ENST00000454175hsa-miR-17-3p99534281995342877mer-m89953426799534288150-17.4
CAediting_578427chr7_99534349_+ENSG00000196652.10ENST00000454175hsa-miR-20b-3p99534343995343497mer-m89953432999534350155-15.85
CAediting_578425chr7_99534282_+ENSG00000196652.10ENST00000454175hsa-miR-317499534278995342836mer9953426299534284143-19.63
CAediting_578422chr7_99534271_+ENSG00000196652.10ENST00000454175hsa-miR-32-5p99534266995342727mer-m89953425199534273144-12.36
CAediting_578423chr7_99534272_+ENSG00000196652.10ENST00000454175hsa-miR-32-5p99534266995342727mer-m89953425199534273144-12.36
CAediting_578422chr7_99534271_+ENSG00000196652.10ENST00000454175hsa-miR-363-3p99534266995342727mer-m89953425299534273149-12.29
CAediting_578423chr7_99534272_+ENSG00000196652.10ENST00000454175hsa-miR-363-3p99534266995342727mer-m89953425299534273149-12.29
CAediting_578433chr7_99534541_+ENSG00000196652.10ENST00000454175hsa-miR-4633-5p99534535995345406mer9953452299534541148-19.07
CAediting_578424chr7_99534277_+ENSG00000196652.10ENST00000454175hsa-miR-467999534271995342777mer-m89953425799534278145-14.64
CAediting_578424chr7_99534277_+ENSG00000196652.10ENST00000454175hsa-miR-467999534271995342777mer-m89953425799534278145-14.64
CAediting_578435chr7_99534598_+ENSG00000196652.10ENST00000454175hsa-miR-498-5p99534592995345987mer-m89953457799534599142-9.71
CAediting_578436chr7_99534599_+ENSG00000196652.10ENST00000454175hsa-miR-498-5p99534592995345987mer-m89953457799534599142-9.71
CAediting_578437chr7_99534610_+ENSG00000196652.10ENST00000454175hsa-miR-5001-3p99534605995346117mer-m89953458899534612153-21.28
CAediting_578427chr7_99534349_+ENSG00000196652.10ENST00000454175hsa-miR-550a-3-5p99534347995343548mer-1a9953433599534354143-16.2
CAediting_578427chr7_99534349_+ENSG00000196652.10ENST00000454175hsa-miR-550a-5p99534347995343548mer-1a9953433299534354143-17.78
CAediting_578427chr7_99534349_+ENSG00000196652.10ENST00000454175hsa-miR-550a-5p99534347995343548mer-1a9953433299534354143-17.78
CAediting_578434chr7_99534555_+ENSG00000196652.10ENST00000454175hsa-miR-625-3p99534552995345587mer-m89953453899534559148-12.75
CAediting_578429chr7_99534420_+ENSG00000196652.10ENST00000454175hsa-miR-629-5p99534418995344258mer-1a9953440499534425144-14.92
CAediting_578430chr7_99534421_+ENSG00000196652.10ENST00000454175hsa-miR-629-5p99534418995344258mer-1a9953440499534425144-14.92
CAediting_578437chr7_99534610_+ENSG00000196652.10ENST00000454175hsa-miR-6836-3p99534603995346097mer-m89953459099534610147-19.02
CAediting_578430chr7_99534421_+ENSG00000196652.10ENST00000454175hsa-miR-6839-3p99534419995344257mer-m89953440599534426140-13.4

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000196652.10ENST00000394170hsa-miR-605-3p99533579995335868mer-1a9953356599533586143-15.48
CAediting_748296chr10_51299626_+ENSG00000196652.10ENST00000454175hsa-miR-605-3p99533579995335868mer-1a9953356599533586143-15.48
CAediting_393chr1_1167164_+ENSG00000196652.10ENST00000454175hsa-miR-200b-3p99531928995319358mer-1a9953191399531935146-15.26
CAediting_524911chr7_5495852_-ENSG00000196652.10ENST00000394170hsa-miR-589-3p99533522995335298mer-1a9953350699533529149-16.32
CAediting_524911chr7_5495852_-ENSG00000196652.10ENST00000394170hsa-miR-589-3p99533689995336957mer-m89953367499533696143-19.13
CAediting_580943chr7_100356700_+ENSG00000196652.10ENST00000454175hsa-miR-6840-3p99534296995343027mer-m89953428299534303143-27.04
CAediting_524911chr7_5495852_-ENSG00000196652.10ENST00000454175hsa-miR-589-3p99533522995335298mer-1a9953350699533529149-16.32
CAediting_524911chr7_5495852_-ENSG00000196652.10ENST00000454175hsa-miR-589-3p99533689995336957mer-m89953367499533696143-19.13
CAediting_524911chr7_5495852_-ENSG00000196652.10ENST00000454175hsa-miR-589-3p99534237995342437mer-m89953422199534244154-15.34
CAediting_1524209chrX_134546392_-ENSG00000196652.10ENST00000394170hsa-miR-503-5p99532855995328606mer9953283899532861151-23.06
CAediting_1524209chrX_134546392_-ENSG00000196652.10ENST00000454175hsa-miR-503-5p99532855995328606mer9953283899532861151-23.06

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_604450chr7_133034877_-ENSG00000196652.10ENST00000394170hsa-miR-365499533482995334887mer-m89953347199533489147-17.2
CAediting_748296chr10_51299626_+ENSG00000196652.10ENST00000394170hsa-miR-605-3p99533283995332897mer-m89953326599533290145-14.84
CAediting_604450chr7_133034877_-ENSG00000196652.10ENST00000454175hsa-miR-365499533482995334887mer-m89953347199533489147-17.2
CAediting_604450chr7_133034877_-ENSG00000196652.10ENST00000454175hsa-miR-365499533992995339987mer-m89953398199533999147-16.86
CAediting_396018chr5_1062918_-ENSG00000196652.10ENST00000454175hsa-miR-463599532317995323237mer-m89953230499532324145-10.94
CAediting_396018chr5_1062918_-ENSG00000196652.10ENST00000454175hsa-miR-463599531624995316307mer-m89953160999531631146-19.12
CAediting_748296chr10_51299626_+ENSG00000196652.10ENST00000454175hsa-miR-605-3p99533283995332897mer-m89953326599533290145-14.84
CAediting_980496chr14_31014685_-ENSG00000196652.10ENST00000454175hsa-miR-624-3p99531584995315907mer-m89953157299531591145-13.68

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZKSCAN5

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000326775.8protein_codingSoverviewSoverview
ENST00000394170.5protein_codingSoverviewSoverview
ENST00000451158.4protein_codingSoverviewSoverview
ENST00000454175.1nonsense_mediated_decaySoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_578331ENST00000326775.8chr7_99506393_+-1361.40-1359.90-1361.40
CAediting_578331ENST00000394170.5chr7_99506393_+-1435.60-1434.10-1435.60
CAediting_578331ENST00000451158.4chr7_99506393_+-976.60-975.00-976.60
CAediting_578331ENST00000454175.1chr7_99506393_+-1922.00-1920.00-1954.30
CAediting_578421ENST00000454175.1chr7_99534256_+-1919.70-1920.00-1954.30
CAediting_578422ENST00000454175.1chr7_99534271_+-1924.20-1920.00-1954.30
CAediting_578423ENST00000454175.1chr7_99534272_+-1919.80-1920.00-1954.30
CAediting_578424ENST00000454175.1chr7_99534277_+-1919.30-1920.00-1954.30
CAediting_578425ENST00000454175.1chr7_99534282_+-1919.60-1920.00-1954.30
CAediting_578426ENST00000454175.1chr7_99534287_+-1919.20-1920.00-1954.30
CAediting_578427ENST00000454175.1chr7_99534349_+-1920.00-1920.00-1954.30
CAediting_578428ENST00000454175.1chr7_99534394_+-1920.00-1920.00-1954.30
CAediting_578429ENST00000454175.1chr7_99534420_+-1922.90-1920.00-1954.30
CAediting_578430ENST00000454175.1chr7_99534421_+-1921.10-1920.00-1954.30
CAediting_578431ENST00000454175.1chr7_99534465_+-1922.20-1920.00-1954.30
CAediting_578432ENST00000454175.1chr7_99534502_+-1921.20-1920.00-1954.30
CAediting_578433ENST00000454175.1chr7_99534541_+-1926.60-1920.00-1954.30
CAediting_578434ENST00000454175.1chr7_99534555_+-1926.20-1920.00-1954.30
CAediting_578435ENST00000454175.1chr7_99534598_+-1919.10-1920.00-1954.30
CAediting_578436ENST00000454175.1chr7_99534599_+-1926.70-1920.00-1954.30
CAediting_578437ENST00000454175.1chr7_99534610_+-1919.90-1920.00-1954.30
CAediting_578438ENST00000454175.1chr7_99534619_+-1919.30-1920.00-1954.30
CAediting_578439ENST00000454175.1chr7_99534623_+-1919.10-1920.00-1954.30
CAediting_578440ENST00000454175.1chr7_99534628_+-1920.40-1920.00-1954.30
CAediting_578441ENST00000454175.1chr7_99534633_+-1923.60-1920.00-1954.30

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Relation with ADAR for ZKSCAN5

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for ZKSCAN5

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for ZKSCAN5

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for ZKSCAN5

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ZKSCAN5

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource