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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: DDX58 (CAeditome ID:23586) |
Gene summary for DDX58 |
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Gene information | Gene symbol | DDX58 | Gene ID | 23586 |
Gene name | DExD/H-box helicase 58 | |
Synonyms | RIG-I|RIG1|RIGI|RLR-1|SGMRT2 | |
Cytomap | 9p21.1 | |
Type of gene | protein-coding | |
Description | antiviral innate immune response receptor RIG-IDEAD (Asp-Glu-Ala-Asp) box polypeptide 58DEAD box protein 58DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptideRNA helicase RIG-Iprobable ATP-dependent RNA helicase DDX58retinoic acid-inducible gene 1 protein | |
Modification date | 20210522 | |
UniProtAcc | O95786 | |
Context | - 31519811(RIG-I activation is critical for responsiveness to checkpoint blockade) |
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Gene | GO ID | GO term | PubMed ID |
DDX58 | GO:0003725 | Antiviral innate immune response receptor RIG-I | 19576794 |
DDX58 | GO:0008270 | Antiviral innate immune response receptor RIG-I | 18243112 |
DDX58 | GO:0009597 | Antiviral innate immune response receptor RIG-I | 17079289 |
DDX58 | GO:0010628 | Antiviral innate immune response receptor RIG-I | 24409285 |
DDX58 | GO:0030334 | Antiviral innate immune response receptor RIG-I | 19122199 |
DDX58 | GO:0032725 | Antiviral innate immune response receptor RIG-I | 24409285 |
DDX58 | GO:0032727 | Antiviral innate immune response receptor RIG-I | 19576794 |
DDX58 | GO:0032728 | Antiviral innate immune response receptor RIG-I | 17079289 |
DDX58 | GO:0032755 | Antiviral innate immune response receptor RIG-I | 24409285 |
DDX58 | GO:0032757 | Antiviral innate immune response receptor RIG-I | 24409285 |
DDX58 | GO:0039529 | Antiviral innate immune response receptor RIG-I | 28469175 |
DDX58 | GO:0045944 | Antiviral innate immune response receptor RIG-I | 17079289 |
DDX58 | GO:0051091 | Antiviral innate immune response receptor RIG-I | 17079289 |
DDX58 | GO:0051607 | Antiviral innate immune response receptor RIG-I | 21478870 |
DDX58 | GO:0140374 | Antiviral innate immune response receptor RIG-I | 28469175 |
DDX58 | GO:0005737 | Antiviral innate immune response receptor RIG-I | 21102435 |
DDX58 | GO:0005829 | Antiviral innate immune response receptor RIG-I | 0000052 |
DDX58 | GO:0005886 | Antiviral innate immune response receptor RIG-I | 0000052 |
DDX58 | GO:0005923 | Antiviral innate immune response receptor RIG-I | 19122199 |
DDX58 | GO:0015629 | Antiviral innate immune response receptor RIG-I | 19122199 |
DDX58 | GO:0032587 | Antiviral innate immune response receptor RIG-I | 19122199 |
DDX58 | GO:1990904 | Antiviral innate immune response receptor RIG-I | 31006531 |
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RNA A-to-I events for DDX58 |
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CAediting_680119(32456051, -), CAediting_680120(32456097, -), CAediting_680121(32456269, -), CAediting_680122(32456292, -), CAediting_680123(32456299, -), CAediting_680124(32456301, -), CAediting_680125(32456304, -), CAediting_680126(32456318, -), CAediting_680127(32456320, -), CAediting_680128(32456325, -), CAediting_680129(32456354, -), CAediting_680130(32456367, -), CAediting_680131(32456368, -), CAediting_680132(32456369, -), CAediting_680133(32456373, -), CAediting_680134(32456376, -), CAediting_680135(32456382, -), CAediting_680136(32456392, -), CAediting_680137(32456398, -), CAediting_680138(32456401, -), CAediting_680139(32456404, -), CAediting_680140(32456406, -), CAediting_680141(32456409, -), CAediting_680142(32456413, -), CAediting_680143(32456415, -), CAediting_680144(32456421, -), CAediting_680145(32456434, -), CAediting_680146(32456447, -), CAediting_680147(32456455, -), CAediting_680148(32456457, -), CAediting_680149(32456474, -), CAediting_680150(32456478, -), CAediting_680151(32456480, -), CAediting_680152(32456482, -), CAediting_680153(32456484, -), CAediting_680154(32456486, -), CAediting_680155(32456488, -), CAediting_680156(32456490, -), CAediting_680157(32456509, -), CAediting_680158(32462537, -), CAediting_680159(32462541, -), CAediting_680160(32462546, -), CAediting_680161(32462547, -), CAediting_680162(32462597, -), CAediting_680163(32462603, -), CAediting_680164(32462688, -), CAediting_680165(32463048, -), CAediting_680166(32463049, -), CAediting_680167(32473330, -), CAediting_680168(32473384, -), CAediting_680169(32473385, -), CAediting_680170(32473396, -), CAediting_680171(32473397, -), CAediting_680172(32473425, -), CAediting_680173(32473466, -), CAediting_680174(32473906, -), CAediting_680175(32474161, -), CAediting_680176(32475054, -), CAediting_680177(32475063, -), CAediting_680178(32475183, -), CAediting_680179(32476313, -), CAediting_680180(32476377, -), CAediting_680181(32476471, -), CAediting_680182(32476483, -), CAediting_680183(32476491, -), CAediting_680184(32476505, -), CAediting_680185(32476789, -), CAediting_680186(32476821, -), CAediting_680187(32476848, -), CAediting_680188(32476868, -), CAediting_680189(32477708, -), CAediting_680190(32481653, -), CAediting_680191(32481654, -), CAediting_680192(32481707, -), CAediting_680193(32481710, -), CAediting_680194(32481714, -), CAediting_680195(32481732, -), CAediting_680196(32481746, -), CAediting_680197(32481802, -), CAediting_680198(32481831, -), CAediting_680199(32481880, -), CAediting_680200(32482604, -), CAediting_680201(32482616, -), CAediting_680202(32482679, -), CAediting_680203(32482715, -), CAediting_680204(32482750, -), CAediting_680205(32482751, -), CAediting_680206(32482759, -), CAediting_680207(32482772, -), CAediting_680208(32482776, -), CAediting_680209(32482777, -), CAediting_680210(32482796, -), CAediting_680211(32482817, -), CAediting_680212(32482844, -), CAediting_680213(32495339, -), CAediting_680214(32495406, -), CAediting_680215(32495798, -), CAediting_680216(32495806, -), CAediting_680217(32495852, -), CAediting_680218(32495853, -), CAediting_680219(32495860, -), CAediting_680220(32495861, -), CAediting_680221(32495876, -), CAediting_680222(32498798, -), CAediting_680223(32499571, -), CAediting_680224(32499593, -), CAediting_680225(32499620, -), CAediting_680226(32499847, -), CAediting_680227(32501383, -), CAediting_680228(32501396, -), CAediting_680229(32504020, -), CAediting_680230(32507766, -), CAediting_680231(32507797, -), CAediting_680232(32524681, -), CAediting_680233(32524688, -), CAediting_680234(32524699, -), CAediting_680235(32524708, -), CAediting_680236(32524709, -), CAediting_680237(32524710, -), CAediting_680238(32524718, -), CAediting_680239(32524757, -), CAediting_680240(32524763, -), CAediting_680241(32524767, -), CAediting_680242(32524770, -), CAediting_680243(32524775, -), CAediting_680244(32524777, -), CAediting_680245(32524778, -), CAediting_680246(32524779, -), CAediting_680247(32524780, -), CAediting_680248(32524785, -), CAediting_680249(32524796, -), CAediting_680250(32524798, -), CAediting_680251(32524816, -), CAediting_680252(32524819, -), CAediting_680253(32524830, -), CAediting_680254(32524835, -), CAediting_680255(32524838, -), CAediting_680256(32524872, -), |
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RNA editing positional annotations for DDX58 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_680119 | chr9_32456051_- | UTR3 |
CAediting_680120 | chr9_32456097_- | UTR3 |
CAediting_680121 | chr9_32456269_- | UTR3 |
CAediting_680122 | chr9_32456292_- | UTR3 |
CAediting_680123 | chr9_32456299_- | UTR3 |
CAediting_680124 | chr9_32456301_- | UTR3 |
CAediting_680125 | chr9_32456304_- | UTR3 |
CAediting_680126 | chr9_32456318_- | UTR3 |
CAediting_680127 | chr9_32456320_- | UTR3 |
CAediting_680128 | chr9_32456325_- | UTR3 |
CAediting_680129 | chr9_32456354_- | UTR3 |
CAediting_680130 | chr9_32456367_- | UTR3 |
CAediting_680131 | chr9_32456368_- | UTR3 |
CAediting_680132 | chr9_32456369_- | UTR3 |
CAediting_680133 | chr9_32456373_- | UTR3 |
CAediting_680134 | chr9_32456376_- | UTR3 |
CAediting_680135 | chr9_32456382_- | UTR3 |
CAediting_680136 | chr9_32456392_- | UTR3 |
CAediting_680137 | chr9_32456398_- | UTR3 |
CAediting_680138 | chr9_32456401_- | UTR3 |
CAediting_680139 | chr9_32456404_- | UTR3 |
CAediting_680140 | chr9_32456406_- | UTR3 |
CAediting_680141 | chr9_32456409_- | UTR3 |
CAediting_680142 | chr9_32456413_- | UTR3 |
CAediting_680143 | chr9_32456415_- | UTR3 |
CAediting_680144 | chr9_32456421_- | UTR3 |
CAediting_680145 | chr9_32456434_- | UTR3 |
CAediting_680146 | chr9_32456447_- | UTR3 |
CAediting_680147 | chr9_32456455_- | UTR3 |
CAediting_680148 | chr9_32456457_- | UTR3 |
CAediting_680149 | chr9_32456474_- | UTR3 |
CAediting_680150 | chr9_32456478_- | UTR3 |
CAediting_680151 | chr9_32456480_- | UTR3 |
CAediting_680152 | chr9_32456482_- | UTR3 |
CAediting_680153 | chr9_32456484_- | UTR3 |
CAediting_680154 | chr9_32456486_- | UTR3 |
CAediting_680155 | chr9_32456488_- | UTR3 |
CAediting_680156 | chr9_32456490_- | UTR3 |
CAediting_680157 | chr9_32456509_- | UTR3 |
CAediting_680158 | chr9_32462537_- | intronic |
CAediting_680159 | chr9_32462541_- | intronic |
CAediting_680160 | chr9_32462546_- | intronic |
CAediting_680161 | chr9_32462547_- | intronic |
CAediting_680162 | chr9_32462597_- | intronic |
CAediting_680163 | chr9_32462603_- | intronic |
CAediting_680164 | chr9_32462688_- | intronic |
CAediting_680165 | chr9_32463048_- | intronic |
CAediting_680166 | chr9_32463049_- | intronic |
CAediting_680167 | chr9_32473330_- | intronic |
CAediting_680168 | chr9_32473384_- | intronic |
CAediting_680169 | chr9_32473385_- | intronic |
CAediting_680170 | chr9_32473396_- | intronic |
CAediting_680171 | chr9_32473397_- | intronic |
CAediting_680172 | chr9_32473425_- | intronic |
CAediting_680173 | chr9_32473466_- | intronic |
CAediting_680174 | chr9_32473906_- | intronic |
CAediting_680175 | chr9_32474161_- | intronic |
CAediting_680176 | chr9_32475054_- | intronic |
CAediting_680177 | chr9_32475063_- | intronic |
CAediting_680178 | chr9_32475183_- | intronic |
CAediting_680179 | chr9_32476313_- | intronic |
CAediting_680180 | chr9_32476377_- | intronic |
CAediting_680181 | chr9_32476471_- | intronic |
CAediting_680182 | chr9_32476483_- | intronic |
CAediting_680183 | chr9_32476491_- | intronic |
CAediting_680184 | chr9_32476505_- | intronic |
CAediting_680185 | chr9_32476789_- | intronic |
CAediting_680186 | chr9_32476821_- | intronic |
CAediting_680187 | chr9_32476848_- | intronic |
CAediting_680188 | chr9_32476868_- | intronic |
CAediting_680189 | chr9_32477708_- | intronic |
CAediting_680190 | chr9_32481653_- | intronic |
CAediting_680191 | chr9_32481654_- | intronic |
CAediting_680192 | chr9_32481707_- | intronic |
CAediting_680193 | chr9_32481710_- | intronic |
CAediting_680194 | chr9_32481714_- | intronic |
CAediting_680195 | chr9_32481732_- | intronic |
CAediting_680196 | chr9_32481746_- | intronic |
CAediting_680197 | chr9_32481802_- | intronic |
CAediting_680198 | chr9_32481831_- | intronic |
CAediting_680199 | chr9_32481880_- | intronic |
CAediting_680200 | chr9_32482604_- | intronic |
CAediting_680201 | chr9_32482616_- | intronic |
CAediting_680202 | chr9_32482679_- | intronic |
CAediting_680203 | chr9_32482715_- | intronic |
CAediting_680204 | chr9_32482750_- | intronic |
CAediting_680205 | chr9_32482751_- | intronic |
CAediting_680206 | chr9_32482759_- | intronic |
CAediting_680207 | chr9_32482772_- | intronic |
CAediting_680208 | chr9_32482776_- | intronic |
CAediting_680209 | chr9_32482777_- | intronic |
CAediting_680210 | chr9_32482796_- | intronic |
CAediting_680211 | chr9_32482817_- | intronic |
CAediting_680212 | chr9_32482844_- | intronic |
CAediting_680213 | chr9_32495339_- | intronic |
CAediting_680214 | chr9_32495406_- | intronic |
CAediting_680215 | chr9_32495798_- | intronic |
CAediting_680216 | chr9_32495806_- | intronic |
CAediting_680217 | chr9_32495852_- | intronic |
CAediting_680218 | chr9_32495853_- | intronic |
CAediting_680219 | chr9_32495860_- | intronic |
CAediting_680220 | chr9_32495861_- | intronic |
CAediting_680221 | chr9_32495876_- | intronic |
CAediting_680222 | chr9_32498798_- | intronic |
CAediting_680223 | chr9_32499571_- | intronic |
CAediting_680224 | chr9_32499593_- | intronic |
CAediting_680225 | chr9_32499620_- | intronic |
CAediting_680226 | chr9_32499847_- | intronic |
CAediting_680227 | chr9_32501383_- | intronic |
CAediting_680228 | chr9_32501396_- | intronic |
CAediting_680229 | chr9_32504020_- | intronic |
CAediting_680230 | chr9_32507766_- | intronic |
CAediting_680231 | chr9_32507797_- | intronic |
CAediting_680232 | chr9_32524681_- | intronic |
CAediting_680233 | chr9_32524688_- | intronic |
CAediting_680234 | chr9_32524699_- | intronic |
CAediting_680235 | chr9_32524708_- | intronic |
CAediting_680236 | chr9_32524709_- | intronic |
CAediting_680237 | chr9_32524710_- | intronic |
CAediting_680238 | chr9_32524718_- | intronic |
CAediting_680239 | chr9_32524757_- | intronic |
CAediting_680240 | chr9_32524763_- | intronic |
CAediting_680241 | chr9_32524767_- | intronic |
CAediting_680242 | chr9_32524770_- | intronic |
CAediting_680243 | chr9_32524775_- | intronic |
CAediting_680244 | chr9_32524777_- | intronic |
CAediting_680245 | chr9_32524778_- | intronic |
CAediting_680246 | chr9_32524779_- | intronic |
CAediting_680247 | chr9_32524780_- | intronic |
CAediting_680248 | chr9_32524785_- | intronic |
CAediting_680249 | chr9_32524796_- | intronic |
CAediting_680250 | chr9_32524798_- | intronic |
CAediting_680251 | chr9_32524816_- | intronic |
CAediting_680252 | chr9_32524819_- | intronic |
CAediting_680253 | chr9_32524830_- | intronic |
CAediting_680254 | chr9_32524835_- | intronic |
CAediting_680255 | chr9_32524838_- | intronic |
CAediting_680256 | chr9_32524872_- | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_680158 | chr9_32462537_- | SINE | Alu | AluSx |
CAediting_680159 | chr9_32462541_- | SINE | Alu | AluSx |
CAediting_680160 | chr9_32462546_- | SINE | Alu | AluSx |
CAediting_680161 | chr9_32462547_- | SINE | Alu | AluSx |
CAediting_680162 | chr9_32462597_- | SINE | Alu | AluSx |
CAediting_680163 | chr9_32462603_- | SINE | Alu | AluSx |
CAediting_680164 | chr9_32462688_- | SINE | Alu | AluSx |
CAediting_680165 | chr9_32463048_- | SINE | Alu | AluSz6 |
CAediting_680166 | chr9_32463049_- | SINE | Alu | AluSz6 |
CAediting_680167 | chr9_32473330_- | SINE | Alu | AluSg7 |
CAediting_680168 | chr9_32473384_- | SINE | Alu | AluSg7 |
CAediting_680169 | chr9_32473385_- | SINE | Alu | AluSg7 |
CAediting_680170 | chr9_32473396_- | SINE | Alu | AluSg7 |
CAediting_680171 | chr9_32473397_- | SINE | Alu | AluSg7 |
CAediting_680172 | chr9_32473425_- | SINE | Alu | AluSg7 |
CAediting_680173 | chr9_32473466_- | SINE | Alu | AluSg7 |
CAediting_680174 | chr9_32473906_- | SINE | Alu | AluSz6 |
CAediting_680175 | chr9_32474161_- | SINE | Alu | AluJb |
CAediting_680176 | chr9_32475054_- | SINE | Alu | AluSz |
CAediting_680177 | chr9_32475063_- | SINE | Alu | AluSz |
CAediting_680178 | chr9_32475183_- | SINE | Alu | AluSz |
CAediting_680179 | chr9_32476313_- | SINE | Alu | AluJr |
CAediting_680180 | chr9_32476377_- | SINE | Alu | AluJr |
CAediting_680181 | chr9_32476471_- | SINE | Alu | AluJr |
CAediting_680182 | chr9_32476483_- | SINE | Alu | AluJr |
CAediting_680183 | chr9_32476491_- | SINE | Alu | AluJr |
CAediting_680184 | chr9_32476505_- | SINE | Alu | AluJr |
CAediting_680185 | chr9_32476789_- | SINE | Alu | AluJr |
CAediting_680186 | chr9_32476821_- | SINE | Alu | AluJr |
CAediting_680187 | chr9_32476848_- | SINE | Alu | AluJr |
CAediting_680188 | chr9_32476868_- | SINE | Alu | AluJr |
CAediting_680189 | chr9_32477708_- | SINE | Alu | AluSx1 |
CAediting_680190 | chr9_32481653_- | SINE | Alu | AluSx |
CAediting_680191 | chr9_32481654_- | SINE | Alu | AluSx |
CAediting_680192 | chr9_32481707_- | SINE | Alu | AluSx |
CAediting_680193 | chr9_32481710_- | SINE | Alu | AluSx |
CAediting_680194 | chr9_32481714_- | SINE | Alu | AluSx |
CAediting_680195 | chr9_32481732_- | SINE | Alu | AluSx |
CAediting_680196 | chr9_32481746_- | SINE | Alu | AluSx |
CAediting_680197 | chr9_32481802_- | SINE | Alu | AluSx |
CAediting_680198 | chr9_32481831_- | SINE | Alu | AluSx |
CAediting_680199 | chr9_32481880_- | SINE | Alu | AluSx |
CAediting_680200 | chr9_32482604_- | SINE | Alu | AluSc |
CAediting_680201 | chr9_32482616_- | SINE | Alu | AluSc |
CAediting_680202 | chr9_32482679_- | SINE | Alu | AluSc |
CAediting_680203 | chr9_32482715_- | SINE | Alu | AluSc |
CAediting_680204 | chr9_32482750_- | SINE | Alu | AluSc |
CAediting_680205 | chr9_32482751_- | SINE | Alu | AluSc |
CAediting_680206 | chr9_32482759_- | SINE | Alu | AluSc |
CAediting_680207 | chr9_32482772_- | SINE | Alu | AluSc |
CAediting_680208 | chr9_32482776_- | SINE | Alu | AluSc |
CAediting_680209 | chr9_32482777_- | SINE | Alu | AluSc |
CAediting_680210 | chr9_32482796_- | SINE | Alu | AluSc |
CAediting_680211 | chr9_32482817_- | SINE | Alu | AluSc |
CAediting_680212 | chr9_32482844_- | SINE | Alu | AluSc |
CAediting_680213 | chr9_32495339_- | SINE | Alu | AluSg4 |
CAediting_680214 | chr9_32495406_- | SINE | Alu | AluSg4 |
CAediting_680215 | chr9_32495798_- | SINE | Alu | AluSx |
CAediting_680216 | chr9_32495806_- | SINE | Alu | AluSx |
CAediting_680217 | chr9_32495852_- | SINE | Alu | AluSx |
CAediting_680218 | chr9_32495853_- | SINE | Alu | AluSx |
CAediting_680219 | chr9_32495860_- | SINE | Alu | AluSx |
CAediting_680220 | chr9_32495861_- | SINE | Alu | AluSx |
CAediting_680221 | chr9_32495876_- | SINE | Alu | AluSx |
CAediting_680222 | chr9_32498798_- | SINE | Alu | AluSx1 |
CAediting_680223 | chr9_32499571_- | SINE | Alu | AluSq2 |
CAediting_680224 | chr9_32499593_- | SINE | Alu | AluSq2 |
CAediting_680225 | chr9_32499620_- | SINE | Alu | AluSq2 |
CAediting_680226 | chr9_32499847_- | SINE | Alu | AluJo |
CAediting_680227 | chr9_32501383_- | SINE | Alu | AluJr |
CAediting_680228 | chr9_32501396_- | SINE | Alu | AluJr |
CAediting_680229 | chr9_32504020_- | SINE | Alu | AluSx1 |
CAediting_680230 | chr9_32507766_- | SINE | Alu | AluJr |
CAediting_680231 | chr9_32507797_- | SINE | Alu | AluJr |
CAediting_680232 | chr9_32524681_- | SINE | Alu | AluSx3 |
CAediting_680233 | chr9_32524688_- | SINE | Alu | AluSx3 |
CAediting_680234 | chr9_32524699_- | SINE | Alu | AluSx3 |
CAediting_680235 | chr9_32524708_- | SINE | Alu | AluSx3 |
CAediting_680236 | chr9_32524709_- | SINE | Alu | AluSx3 |
CAediting_680237 | chr9_32524710_- | SINE | Alu | AluSx3 |
CAediting_680238 | chr9_32524718_- | SINE | Alu | AluSx3 |
CAediting_680239 | chr9_32524757_- | SINE | Alu | AluSx3 |
CAediting_680240 | chr9_32524763_- | SINE | Alu | AluSx3 |
CAediting_680241 | chr9_32524767_- | SINE | Alu | AluSx3 |
CAediting_680242 | chr9_32524770_- | SINE | Alu | AluSx3 |
CAediting_680243 | chr9_32524775_- | SINE | Alu | AluSx3 |
CAediting_680244 | chr9_32524777_- | SINE | Alu | AluSx3 |
CAediting_680245 | chr9_32524778_- | SINE | Alu | AluSx3 |
CAediting_680246 | chr9_32524779_- | SINE | Alu | AluSx3 |
CAediting_680247 | chr9_32524780_- | SINE | Alu | AluSx3 |
CAediting_680248 | chr9_32524785_- | SINE | Alu | AluSx3 |
CAediting_680249 | chr9_32524796_- | SINE | Alu | AluSx3 |
CAediting_680250 | chr9_32524798_- | SINE | Alu | AluSx3 |
CAediting_680251 | chr9_32524816_- | SINE | Alu | AluSx3 |
CAediting_680252 | chr9_32524819_- | SINE | Alu | AluSx3 |
CAediting_680253 | chr9_32524830_- | SINE | Alu | AluSx3 |
CAediting_680254 | chr9_32524835_- | SINE | Alu | AluSx3 |
CAediting_680255 | chr9_32524838_- | SINE | Alu | AluSx3 |
CAediting_680256 | chr9_32524872_- | LTR | ERVK | LTR3A |
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RNA A-to-I editing events in the alternative splicing sites for DDX58 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DDX58 |
![]() * The grey color means N/A. |
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![]() * Click on the image to enlarge it in a new window. |
BLCA.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
BLCA.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
BLCA.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
BRCA.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
BRCA.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
BRCA.CAediting_680130.ENSG00000107201.DDX58.png ![]() |
BRCA.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
BRCA.CAediting_680143.ENSG00000107201.DDX58.png ![]() |
BRCA.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
CESC.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
CESC.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
COAD.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
COAD.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
COAD.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
GBM.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
GBM.CAediting_680130.ENSG00000107201.DDX58.png ![]() |
HNSC.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
HNSC.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
HNSC.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
HNSC.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
KIRC.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
KIRP.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
KIRP.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
LAML.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
LGG.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
LGG.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
LGG.CAediting_680130.ENSG00000107201.DDX58.png ![]() |
LGG.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
LIHC.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
LIHC.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
LUAD.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
LUAD.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
LUSC.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
LUSC.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
LUSC.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
LUSC.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
OV.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
OV.CAediting_680130.ENSG00000107201.DDX58.png ![]() |
OV.CAediting_680143.ENSG00000107201.DDX58.png ![]() |
OV.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
PCPG.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
PCPG.CAediting_680127.ENSG00000107201.DDX58.png ![]() |
PCPG.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
PRAD.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
PRAD.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
PRAD.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
SKCM.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
STAD.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
STAD.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
TGCT.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
THCA.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
THCA.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
THCA.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
THYM.CAediting_680130.ENSG00000107201.DDX58.png ![]() |
THYM.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
UCEC.CAediting_680126.ENSG00000107201.DDX58.png ![]() |
UCEC.CAediting_680135.ENSG00000107201.DDX58.png ![]() |
UCEC.CAediting_680155.ENSG00000107201.DDX58.png ![]() |
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Protein coding region RNA A-to-I editings for DDX58 |
![]() * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for DDX58 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for DDX58 |
![]() * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for DDX58 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BLCA | CAediting_680125 | chr9_32456304_- | . | . | 5.59652188388801e-11 | 0.634103529376911 | . | . |
LGG | CAediting_680125 | chr9_32456304_- | . | . | 3.39434166060511e-08 | 0.448725669483029 | . | . |
BRCA | CAediting_680125 | chr9_32456304_- | . | . | 7.40400555460299e-05 | 0.169226864420741 | . | . |
LUAD | CAediting_680125 | chr9_32456304_- | . | . | 0.0152631057231598 | 0.181606764260928 | . | . |
GBM | CAediting_680125 | chr9_32456304_- | . | . | 0.00177977587807247 | 0.36201042524922 | . | . |
PRAD | CAediting_680125 | chr9_32456304_- | . | . | 0.0233420616383293 | 0.162364517563371 | . | . |
STAD | CAediting_680125 | chr9_32456304_- | . | . | 3.59435163259725e-05 | 0.3234542904041 | . | . |
KIRC | CAediting_680125 | chr9_32456304_- | . | . | 2.60635688863363e-06 | 0.250967003632009 | . | . |
KIRP | CAediting_680125 | chr9_32456304_- | . | . | 7.66824269218027e-07 | 0.551090146979958 | . | . |
ESCA | CAediting_680125 | chr9_32456304_- | . | . | 0.023015353579784 | 0.253963936156573 | . | . |
SKCM | CAediting_680125 | chr9_32456304_- | . | . | 5.18804692877244e-06 | 0.404053428523582 | . | . |
SARC | CAediting_680125 | chr9_32456304_- | . | . | 5.11515072321571e-12 | 0.662261625677712 | . | . |
THYM | CAediting_680125 | chr9_32456304_- | . | . | 0.000266002834071984 | 0.450849420576477 | . | . |
BLCA | CAediting_680126 | chr9_32456318_- | 0.000562450669892792 | 0.212884698889066 | . | . | . | . |
LGG | CAediting_680126 | chr9_32456318_- | 0.00865414731933947 | 0.128728585276117 | . | . | . | . |
BRCA | CAediting_680126 | chr9_32456318_- | 7.66388661021157e-28 | 0.328209607004276 | . | . | . | . |
LIHC | CAediting_680126 | chr9_32456318_- | 0.0199681166435379 | 0.169609717602624 | . | . | . | . |
CESC | CAediting_680126 | chr9_32456318_- | 0.000754529727581927 | 0.206868125035542 | . | . | . | . |
LUAD | CAediting_680126 | chr9_32456318_- | 1.07358469870674e-05 | 0.210262810652021 | . | . | . | . |
COAD | CAediting_680126 | chr9_32456318_- | 0.000513455350431082 | 0.24586981880552 | . | . | . | . |
LUSC | CAediting_680126 | chr9_32456318_- | 1.64392241644443e-05 | 0.225866773224482 | . | . | . | . |
GBM | CAediting_680126 | chr9_32456318_- | 0.017318989089129 | 0.194087265437773 | . | . | . | . |
PRAD | CAediting_680126 | chr9_32456318_- | 1.43067453646295e-05 | 0.219720580047856 | . | . | . | . |
HNSC | CAediting_680126 | chr9_32456318_- | 1.35701571324318e-08 | 0.272639397650315 | . | . | . | . |
THCA | CAediting_680126 | chr9_32456318_- | 8.59886908716277e-06 | 0.214713633043924 | . | . | . | . |
UCEC | CAediting_680126 | chr9_32456318_- | 0.000279948998395596 | 0.213659662239958 | . | . | . | . |
KIRP | CAediting_680126 | chr9_32456318_- | 0.00254522672945323 | 0.197673370815295 | . | . | . | . |
ESCA | CAediting_680126 | chr9_32456318_- | 0.0385340464083878 | 0.164272239894118 | . | . | . | . |
LAML | CAediting_680126 | chr9_32456318_- | 0.00358800527749465 | 0.291507346347234 | . | . | . | . |
OV | CAediting_680126 | chr9_32456318_- | 9.88731234507375e-06 | 0.228424485487999 | . | . | . | . |
PCPG | CAediting_680126 | chr9_32456318_- | 0.0247203798926067 | 0.203284975066424 | . | . | . | . |
SKCM | CAediting_680126 | chr9_32456318_- | 2.78520733265098e-08 | 0.331803791449639 | . | . | . | . |
SARC | CAediting_680126 | chr9_32456318_- | 0.00241576750313217 | 0.229230328190036 | . | . | . | . |
TGCT | CAediting_680126 | chr9_32456318_- | 1.24703240175265e-05 | 0.444988724757859 | . | . | . | . |
THYM | CAediting_680126 | chr9_32456318_- | 5.48144384034417e-05 | 0.379737723868788 | . | . | . | . |
LGG | CAediting_680127 | chr9_32456320_- | 0.00112143101764317 | 0.184208289579449 | . | . | . | . |
BRCA | CAediting_680127 | chr9_32456320_- | 6.47682144887713e-20 | 0.28608483308035 | . | . | . | . |
LIHC | CAediting_680127 | chr9_32456320_- | 0.000842651630157252 | 0.260572179478235 | . | . | . | . |
LUAD | CAediting_680127 | chr9_32456320_- | 0.0177058550903179 | 0.121615024374003 | . | . | . | . |
COAD | CAediting_680127 | chr9_32456320_- | 0.0331414714979775 | 0.164468235901216 | . | . | . | . |
LUSC | CAediting_680127 | chr9_32456320_- | 0.00159208308102515 | 0.177752066308493 | . | . | . | . |
HNSC | CAediting_680127 | chr9_32456320_- | 0.000188253717470793 | 0.192704210157116 | . | . | . | . |
STAD | CAediting_680127 | chr9_32456320_- | 0.000688066394289877 | 0.201306911559762 | . | . | . | . |
THCA | CAediting_680127 | chr9_32456320_- | 0.00252981073281629 | 0.156760908433162 | . | . | . | . |
KIRC | CAediting_680127 | chr9_32456320_- | 0.00544553745831756 | 0.125641895848963 | . | . | . | . |
ESCA | CAediting_680127 | chr9_32456320_- | 0.0294686090485356 | 0.180874803432129 | . | . | . | . |
OV | CAediting_680127 | chr9_32456320_- | 2.47322615100086e-05 | 0.225268462291829 | . | . | . | . |
PAAD | CAediting_680127 | chr9_32456320_- | 0.0083209164299423 | 0.232314777572269 | . | . | . | . |
SKCM | CAediting_680127 | chr9_32456320_- | 0.000947682260620981 | 0.2170195597675 | . | . | . | . |
READ | CAediting_680127 | chr9_32456320_- | 0.0299385807388507 | 0.290366138393779 | . | . | . | . |
SARC | CAediting_680127 | chr9_32456320_- | 0.00121062105206762 | 0.268944990660998 | . | . | . | . |
TGCT | CAediting_680127 | chr9_32456320_- | 9.99412166826231e-06 | 0.482829628185325 | . | . | . | . |
THYM | CAediting_680127 | chr9_32456320_- | 0.000111620335241873 | 0.378580549845878 | . | . | . | . |
BLCA | CAediting_680130 | chr9_32456367_- | 0.000157949885730102 | 0.266675332084025 | . | . | . | . |
LGG | CAediting_680130 | chr9_32456367_- | 0.00379377045794417 | 0.159183551284483 | . | . | . | . |
BRCA | CAediting_680130 | chr9_32456367_- | 1.09700525661307e-52 | 0.466154863964843 | . | . | . | . |
LIHC | CAediting_680130 | chr9_32456367_- | 3.51734315938115e-05 | 0.328893626212498 | . | . | . | . |
CESC | CAediting_680130 | chr9_32456367_- | 0.000170061353462593 | 0.26608422460159 | . | . | . | . |
LUAD | CAediting_680130 | chr9_32456367_- | 0.0137617218834343 | 0.133491066092723 | . | . | . | . |
LUSC | CAediting_680130 | chr9_32456367_- | 8.37240305440997e-06 | 0.261836924264446 | . | . | . | . |
GBM | CAediting_680130 | chr9_32456367_- | 0.000111202604985575 | 0.34687737886401 | . | . | . | . |
HNSC | CAediting_680130 | chr9_32456367_- | 2.06273743494815e-05 | 0.232412812699939 | . | . | . | . |
THCA | CAediting_680130 | chr9_32456367_- | 0.00573071077786087 | 0.158111137448617 | . | . | . | . |
UCEC | CAediting_680130 | chr9_32456367_- | 1.27641102732404e-05 | 0.297509311676497 | . | . | . | . |
ESCA | CAediting_680130 | chr9_32456367_- | 0.00179223574210816 | 0.259828661865525 | . | . | . | . |
LAML | CAediting_680130 | chr9_32456367_- | 0.0256596250731217 | 0.264764021835883 | . | . | . | . |
OV | CAediting_680130 | chr9_32456367_- | 3.73594784756687e-09 | 0.31549340781896 | . | . | . | . |
SKCM | CAediting_680130 | chr9_32456367_- | 2.44729215397803e-08 | 0.373088878947925 | . | . | . | . |
SARC | CAediting_680130 | chr9_32456367_- | 0.00806976876701396 | 0.231416911318998 | . | . | . | . |
TGCT | CAediting_680130 | chr9_32456367_- | 0.00316855196515121 | 0.327992912776521 | . | . | . | . |
THYM | CAediting_680130 | chr9_32456367_- | 2.10017963915064e-05 | 0.425696474446217 | . | . | . | . |
BLCA | CAediting_680135 | chr9_32456382_- | 3.95293210902015e-05 | 0.256365159094345 | 8.42024178880697e-05 | 0.245606485123887 | . | . |
LGG | CAediting_680135 | chr9_32456382_- | 0.0102161228295549 | 0.122471727840749 | . | . | . | . |
BRCA | CAediting_680135 | chr9_32456382_- | 1.13126344486164e-36 | 0.375371285006343 | . | . | . | . |
LIHC | CAediting_680135 | chr9_32456382_- | 0.000353303500226935 | 0.248950740124405 | . | . | . | . |
CESC | CAediting_680135 | chr9_32456382_- | 4.21686219703751e-08 | 0.330657133137607 | . | . | . | . |
LUAD | CAediting_680135 | chr9_32456382_- | 1.11670044578063e-05 | 0.213046836964914 | . | . | . | . |
COAD | CAediting_680135 | chr9_32456382_- | 1.65405850895033e-07 | 0.365120725712211 | . | . | . | . |
LUSC | CAediting_680135 | chr9_32456382_- | 2.52111602538164e-08 | 0.283875718194117 | . | . | . | . |
GBM | CAediting_680135 | chr9_32456382_- | 0.000475192633780464 | 0.284654326236375 | . | . | . | . |
PRAD | CAediting_680135 | chr9_32456382_- | 0.000646019167177196 | 0.171143904784469 | . | . | . | . |
HNSC | CAediting_680135 | chr9_32456382_- | 2.37032541518525e-09 | 0.286715239287872 | . | . | . | . |
STAD | CAediting_680135 | chr9_32456382_- | 0.00177169815079076 | 0.176860662617493 | . | . | . | . |
THCA | CAediting_680135 | chr9_32456382_- | 6.42290829676866e-05 | 0.188503728196466 | . | . | . | . |
KIRC | CAediting_680135 | chr9_32456382_- | 0.000249729639438695 | 0.162142000626595 | . | . | . | . |
UCEC | CAediting_680135 | chr9_32456382_- | 6.2498091558307e-08 | 0.306176236676115 | . | . | . | . |
KIRP | CAediting_680135 | chr9_32456382_- | 0.00476664705314248 | 0.186709547984705 | . | . | . | . |
ESCA | CAediting_680135 | chr9_32456382_- | 0.00604113316425171 | 0.219606042791533 | . | . | . | . |
LAML | CAediting_680135 | chr9_32456382_- | 0.0337570726583313 | 0.250572462300812 | . | . | . | . |
OV | CAediting_680135 | chr9_32456382_- | 5.44240902184981e-07 | 0.261805766156722 | . | . | . | . |
PAAD | CAediting_680135 | chr9_32456382_- | 0.0198916960107543 | 0.188714559532175 | . | . | . | . |
SKCM | CAediting_680135 | chr9_32456382_- | 3.15813326432316e-06 | 0.272022355138188 | . | . | . | . |
READ | CAediting_680135 | chr9_32456382_- | 0.0190269288921587 | 0.281708244935554 | . | . | . | . |
SARC | CAediting_680135 | chr9_32456382_- | 0.000445777258653239 | 0.256272596802342 | . | . | . | . |
TGCT | CAediting_680135 | chr9_32456382_- | 2.50128986758333e-07 | 0.484320166433654 | . | . | . | . |
THYM | CAediting_680135 | chr9_32456382_- | 2.09584050275251e-06 | 0.443972897441071 | . | . | . | . |
BLCA | CAediting_680143 | chr9_32456415_- | 0.00245721302988666 | 0.298178025185287 | . | . | . | . |
BRCA | CAediting_680143 | chr9_32456415_- | 2.20519930172583e-09 | 0.229471258446357 | . | . | . | . |
LUSC | CAediting_680143 | chr9_32456415_- | 0.0440769650939915 | 0.164095986155572 | . | . | . | . |
UCEC | CAediting_680143 | chr9_32456415_- | . | . | 0.00393273094786366 | 0.257180842602601 | . | . |
OV | CAediting_680143 | chr9_32456415_- | 0.00195203564526624 | 0.186333215432832 | . | . | . | . |
PAAD | CAediting_680143 | chr9_32456415_- | 0.0456222053244217 | 0.273205533173034 | 0.0401945835085089 | 0.280144074286632 | . | . |
LGG | CAediting_680147 | chr9_32456455_- | . | . | 0.0139550140722646 | 0.191653222419246 | 0.0237328628999651 | 0.176548657251697 |
THYM | CAediting_680147 | chr9_32456455_- | 0.0234201689839232 | 0.280890268465774 | . | . | . | . |
BRCA | CAediting_680155 | chr9_32456488_- | 6.6297742156494e-22 | 0.323966703282304 | . | . | . | . |
LUSC | CAediting_680155 | chr9_32456488_- | 0.000394854230167665 | 0.258536561787663 | . | . | . | . |
PRAD | CAediting_680155 | chr9_32456488_- | 0.00251033281497805 | 0.257143667025952 | . | . | . | . |
HNSC | CAediting_680155 | chr9_32456488_- | 0.0342553583460379 | 0.130357694215938 | . | . | . | . |
STAD | CAediting_680155 | chr9_32456488_- | 0.000315764615132831 | 0.204239667875236 | . | . | . | . |
THCA | CAediting_680155 | chr9_32456488_- | 0.0285139358569329 | 0.169017446250988 | . | . | . | . |
UCEC | CAediting_680155 | chr9_32456488_- | 0.00816043285444438 | 0.216694520215438 | . | . | . | . |
ESCA | CAediting_680155 | chr9_32456488_- | 0.01680777054829 | 0.192426733597622 | . | . | . | . |
OV | CAediting_680155 | chr9_32456488_- | 3.31063954047934e-06 | 0.246675825796192 | . | . | . | . |
SKCM | CAediting_680155 | chr9_32456488_- | 0.00254477198925951 | 0.286293206948681 | . | . | . | . |
SARC | CAediting_680155 | chr9_32456488_- | 0.0012157112602664 | 0.381589555485273 | . | . | . | . |
THYM | CAediting_680155 | chr9_32456488_- | 8.96851684474491e-05 | 0.41421472801098 | . | . | . | . |
BRCA | CAediting_680157 | chr9_32456509_- | . | . | . | . | 0.0377502038492781 | 0.18912389804756 |
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Relation with cancer stages for DDX58 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BLCA | pathologic_stage | CAediting_680127 | chr9_32456320_- | 0.010137115127178 | 0.173414037972091 |
BLCA | pathologic_stage | CAediting_680135 | chr9_32456382_- | 0.00916468039792484 | 0.164181631134805 |
BLCA | pathologic_stage | CAediting_680143 | chr9_32456415_- | 0.0209981846377301 | 0.229439445334901 |
BLCA | pathologic_stage | CAediting_680155 | chr9_32456488_- | 0.0320458174417903 | 0.19835385007085 |
BRCA | pathologic_stage | CAediting_680125 | chr9_32456304_- | 0.0343620026008235 | 0.0916675643532713 |
BRCA | pathologic_stage | CAediting_680127 | chr9_32456320_- | 0.0336831808233654 | 0.0685911777299859 |
BRCA | pathologic_stage | CAediting_680135 | chr9_32456382_- | 0.000299338559188733 | 0.112174576192974 |
BRCA | pathologic_stage | CAediting_680143 | chr9_32456415_- | 0.0358164966587629 | 0.0822219114323763 |
BRCA | pathologic_stage | CAediting_680155 | chr9_32456488_- | 0.00137940579027485 | 0.111668592338181 |
CESC | clinical_stage | CAediting_680125 | chr9_32456304_- | 0.0362181406136289 | -0.258353166386929 |
CESC | clinical_stage | CAediting_680126 | chr9_32456318_- | 0.0203836015303263 | -0.144331786598317 |
CESC | clinical_stage | CAediting_680127 | chr9_32456320_- | 0.012381270208594 | -0.165768023814229 |
ESCA | clinical_stage | CAediting_680127 | chr9_32456320_- | 0.0434836717385004 | -0.309415686075457 |
HNSC | clinical_stage | CAediting_680135 | chr9_32456382_- | 0.0424455569796659 | 0.100882484708479 |
HNSC | clinical_stage | CAediting_680147 | chr9_32456455_- | 0.00842402309097332 | 0.238516396430861 |
HNSC | pathologic_stage | CAediting_680126 | chr9_32456318_- | 0.00426942900862633 | 0.149040570836741 |
HNSC | pathologic_stage | CAediting_680127 | chr9_32456320_- | 0.00193523119893934 | 0.171343620257832 |
HNSC | pathologic_stage | CAediting_680135 | chr9_32456382_- | 0.00355511133020156 | 0.153055082264191 |
HNSC | pathologic_stage | CAediting_680147 | chr9_32456455_- | 7.91945301775496e-05 | 0.370487493757846 |
HNSC | pathologic_stage | CAediting_680155 | chr9_32456488_- | 0.0112086834685691 | 0.168057361743629 |
KIRC | pathologic_stage | CAediting_680127 | chr9_32456320_- | 6.76486022756967e-06 | 0.202568671027255 |
KIRC | pathologic_stage | CAediting_680130 | chr9_32456367_- | 0.00073095229665218 | 0.16025686948872 |
KIRC | pathologic_stage | CAediting_680135 | chr9_32456382_- | 0.0438213445407232 | 0.0898321223663022 |
KIRC | pathologic_stage | CAediting_680143 | chr9_32456415_- | 0.00956697125687156 | 0.157145374179805 |
KIRP | clinical_stage | CAediting_680126 | chr9_32456318_- | 0.0124178251409266 | 0.197863289087385 |
KIRP | clinical_stage | CAediting_680127 | chr9_32456320_- | 0.00521327502754705 | 0.259990120846068 |
KIRP | clinical_stage | CAediting_680130 | chr9_32456367_- | 0.0107517043453498 | -0.294903731868334 |
KIRP | clinical_stage | CAediting_680135 | chr9_32456382_- | 0.0162654232762418 | 0.191524391032614 |
KIRP | pathologic_stage | CAediting_680125 | chr9_32456304_- | 0.0137584822014726 | -0.308926236359211 |
KIRP | pathologic_stage | CAediting_680126 | chr9_32456318_- | 2.26685455136522e-05 | 0.289212448255411 |
KIRP | pathologic_stage | CAediting_680127 | chr9_32456320_- | 0.0115927442258633 | 0.206999241500768 |
KIRP | pathologic_stage | CAediting_680130 | chr9_32456367_- | 0.042447253678588 | -0.205415183693078 |
KIRP | pathologic_stage | CAediting_680135 | chr9_32456382_- | 0.00322221237114664 | 0.204803883470946 |
LUAD | pathologic_stage | CAediting_680127 | chr9_32456320_- | 0.0103527245647571 | 0.132254566053292 |
LUAD | pathologic_stage | CAediting_680130 | chr9_32456367_- | 0.0419617071044106 | 0.111028808948417 |
LUAD | pathologic_stage | CAediting_680135 | chr9_32456382_- | 0.0177784334091001 | 0.116585327669732 |
OV | clinical_stage | CAediting_680143 | chr9_32456415_- | 0.0425345873412303 | 0.123079668189787 |
OV | clinical_stage | CAediting_680156 | chr9_32456490_- | 0.0376909671067647 | 0.219451107250172 |
READ | pathologic_stage | CAediting_680127 | chr9_32456320_- | 0.0273449545856941 | 0.312107720436974 |
STAD | pathologic_stage | CAediting_680156 | chr9_32456490_- | 0.00553351028945889 | -0.272819361992439 |
TGCT | pathologic_stage | CAediting_680135 | chr9_32456382_- | 0.0415494369159423 | -0.29229699260321 |
THCA | pathologic_stage | CAediting_680133 | chr9_32456373_- | 0.00611942444011352 | 0.358865461954259 |
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Relation with survival for DDX58 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
CESC | CAediting_680147 | chr9_32456455_- | 0.0118020119618023 | 0.00424979 | 50593 |
COAD | CAediting_680127 | chr9_32456320_- | 0.0339507328459119 | 0.0338826 | 0.0833757 |
UCEC | CAediting_680126 | chr9_32456318_- | 0.000514397912170117 | 0.00134436 | 72.1821 |
UCEC | CAediting_680130 | chr9_32456367_- | 0.00407087837606879 | 0.0162844 | 47.1044 |
UCEC | CAediting_680135 | chr9_32456382_- | 0.000497739604626513 | 0.00269365 | 14.9495 |
ESCA | CAediting_680135 | chr9_32456382_- | 0.00390145246739526 | 0.0146883 | 13.0222 |
ESCA | CAediting_680143 | chr9_32456415_- | 0.0453336333522638 | 0.0401254 | 1074.61 |
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RelatedDrugs for DDX58 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DDX58 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
DDX58 | C0019196 | Hepatitis C | 1 | CTD_human |
DDX58 | C0021400 | Influenza | 1 | CTD_human |
DDX58 | C0030246 | Pustulosis of Palms and Soles | 1 | CTD_human |
DDX58 | C0033860 | Psoriasis | 1 | CTD_human |
DDX58 | C0235874 | Disease Exacerbation | 1 | CTD_human |
DDX58 | C0432254 | Singleton Merten syndrome | 1 | ORPHANET |
DDX58 | C4225380 | SINGLETON-MERTEN SYNDROME 2 | 1 | UNIPROT |
DDX58 | C4225427 | SINGLETON-MERTEN SYNDROME 1 | 1 | GENOMICS_ENGLAND |