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Editing gene: FPGS (CAeditome ID:2356)

Gene summary for FPGS

Gene summary

Gene information	Gene symbol	FPGS
	Gene ID	2356
	Gene name	folylpolyglutamate synthase
	Synonyms	-
	Cytomap	9q34.11
	Type of gene	protein-coding
	Description	folylpolyglutamate synthase, mitochondrialfolylpoly-gamma-glutamate synthetasetetrahydrofolate synthasetetrahydrofolylpolyglutamate synthase
	Modification date	20210518
	UniProtAcc	Q05932
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
FPGS	GO:0004326	Folylpolyglutamate synthase, mitochondrial	3619447
FPGS	GO:0006536	Folylpolyglutamate synthase, mitochondrial	3619447
FPGS	GO:0006760	Folylpolyglutamate synthase, mitochondrial	3619447
FPGS	GO:0046901	Folylpolyglutamate synthase, mitochondrial	3619447

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RNA A-to-I events for FPGS

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000136877.13

RNA A-to-I editing events in Cancer.

CAediting_711008(127794989, +), CAediting_711009(127795011, +), CAediting_711010(127795012, +), CAediting_711011(127795033, +), CAediting_711012(127795034, +), CAediting_711013(127795047, +), CAediting_711014(127795050, +), CAediting_711015(127795055, +), CAediting_711016(127795058, +), CAediting_711017(127795064, +), CAediting_711018(127795069, +), CAediting_711019(127795078, +), CAediting_711020(127795079, +), CAediting_711021(127795084, +), CAediting_711022(127795087, +), CAediting_711023(127795088, +), CAediting_711024(127795100, +), CAediting_711025(127795103, +), CAediting_711026(127795104, +), CAediting_711027(127795105, +), CAediting_711028(127795106, +), CAediting_711029(127795107, +), CAediting_711030(127795109, +), CAediting_711031(127795111, +), CAediting_711032(127795112, +), CAediting_711033(127795113, +), CAediting_711034(127795114, +), CAediting_711035(127795115, +), CAediting_711036(127795118, +), CAediting_711037(127795138, +), CAediting_711038(127795150, +), CAediting_711039(127795154, +), CAediting_711040(127795155, +), CAediting_711041(127795161, +), CAediting_711042(127795167, +), CAediting_711043(127795174, +), CAediting_711044(127795176, +), CAediting_711045(127795180, +), CAediting_711046(127795185, +), CAediting_711047(127795193, +), CAediting_711048(127795199, +), CAediting_711049(127795210, +), CAediting_711050(127795225, +), CAediting_711051(127795235, +), CAediting_711052(127795244, +), CAediting_711053(127795245, +), CAediting_711054(127795247, +), CAediting_711055(127795253, +), CAediting_711056(127795265, +), CAediting_711057(127795274, +), CAediting_711058(127795296, +), CAediting_711059(127795299, +), CAediting_711060(127795314, +), CAediting_711061(127795315, +), CAediting_711062(127795320, +), CAediting_711063(127795324, +), CAediting_711064(127795337, +), CAediting_711065(127795341, +), CAediting_711066(127795344, +), CAediting_711067(127795347, +), CAediting_711068(127795355, +), CAediting_711069(127795356, +), CAediting_711070(127795376, +), CAediting_711071(127795385, +), CAediting_711072(127795390, +), CAediting_711073(127795399, +), CAediting_711074(127795400, +), CAediting_711075(127795405, +), CAediting_711076(127795414, +), CAediting_711077(127795415, +), CAediting_711078(127795417, +), CAediting_711079(127795419, +), CAediting_711080(127795423, +), CAediting_711081(127795437, +), CAediting_711082(127795447, +), CAediting_711083(127795453, +), CAediting_711084(127795455, +), CAediting_711085(127795473, +), CAediting_711086(127795481, +), CAediting_711087(127795482, +), CAediting_711088(127795487, +), CAediting_711089(127795490, +), CAediting_711090(127795517, +), CAediting_711091(127795520, +), CAediting_711092(127795525, +), CAediting_711093(127795528, +), CAediting_711094(127795530, +), CAediting_711095(127795534, +), CAediting_711096(127795549, +), CAediting_711097(127795551, +), CAediting_711098(127795557, +), CAediting_711099(127795558, +), CAediting_711100(127795559, +), CAediting_711101(127795573, +), CAediting_711102(127795574, +), CAediting_711103(127795575, +), CAediting_711104(127795576, +), CAediting_711105(127795577, +), CAediting_711106(127795581, +), CAediting_711107(127795582, +), CAediting_711108(127795583, +), CAediting_711109(127795585, +), CAediting_711110(127795589, +), CAediting_711111(127795615, +), CAediting_711112(127795625, +), CAediting_711113(127795637, +), CAediting_711114(127795641, +), CAediting_711115(127795644, +), CAediting_711116(127795647, +), CAediting_711117(127795655, +), CAediting_711118(127795656, +), CAediting_711119(127795663, +), CAediting_711120(127795669, +), CAediting_711121(127795676, +), CAediting_711122(127795680, +), CAediting_711123(127795687, +), CAediting_711124(127795695, +), CAediting_711125(127795700, +), CAediting_711126(127795705, +), CAediting_711127(127795715, +), CAediting_711128(127795717, +), CAediting_711129(127795719, +), CAediting_711130(127795723, +), CAediting_711131(127796102, +), CAediting_711132(127796114, +), CAediting_711133(127796190, +), CAediting_711134(127796191, +), CAediting_711135(127796220, +), CAediting_711136(127796229, +), CAediting_711137(127796245, +), CAediting_711138(127796251, +), CAediting_711139(127796252, +), CAediting_711140(127796255, +), CAediting_711141(127796270, +), CAediting_711142(127796287, +), CAediting_711143(127796299, +), CAediting_711144(127796310, +), CAediting_711145(127796352, +), CAediting_711146(127797761, +), CAediting_711147(127797821, +), CAediting_711148(127797830, +), CAediting_711149(127797834, +), CAediting_711150(127798954, +), CAediting_711151(127799032, +), CAediting_711152(127799054, +), CAediting_711153(127799135, +), CAediting_711154(127799972, +), CAediting_711155(127800018, +), CAediting_711156(127800065, +), CAediting_711157(127800066, +), CAediting_711158(127800069, +), CAediting_711159(127800099, +), CAediting_711160(127800105, +), CAediting_711161(127800821, +), CAediting_711162(127801809, +), CAediting_711163(127801866, +), CAediting_711164(127804942, +), CAediting_711165(127804950, +), CAediting_711166(127804969, +), CAediting_711167(127804992, +), CAediting_711168(127805006, +), CAediting_711169(127805015, +), CAediting_711170(127805018, +), CAediting_711171(127805028, +), CAediting_711172(127805046, +), CAediting_711173(127805054, +), CAediting_711174(127805069, +), CAediting_711175(127805072, +), CAediting_711176(127805086, +), CAediting_711177(127805136, +), CAediting_711178(127805151, +), CAediting_711179(127805267, +), CAediting_711180(127805294, +), CAediting_711181(127805306, +), CAediting_711182(127805324, +), CAediting_711183(127805329, +), CAediting_711184(127805344, +), CAediting_711185(127805375, +), CAediting_711186(127805392, +), CAediting_711187(127805398, +), CAediting_711188(127805421, +), CAediting_711189(127805508, +), CAediting_711190(127805509, +), CAediting_711191(127805514, +), CAediting_711192(127805525, +), CAediting_711193(127805530, +), CAediting_711194(127805544, +), CAediting_711195(127805554, +), CAediting_711196(127805578, +), CAediting_711197(127806113, +), CAediting_711198(127806114, +), CAediting_711199(127806137, +), CAediting_711200(127806140, +), CAediting_711201(127806144, +), CAediting_711202(127806167, +), CAediting_711203(127806168, +), CAediting_711204(127806182, +), CAediting_711205(127806183, +), CAediting_711206(127806193, +), CAediting_711207(127806220, +), CAediting_711208(127806250, +), CAediting_711209(127806251, +), CAediting_711210(127806256, +), CAediting_711211(127806289, +), CAediting_711212(127806296, +), CAediting_711213(127806304, +), CAediting_711214(127806320, +), CAediting_711215(127806329, +), CAediting_711216(127806330, +), CAediting_711217(127806341, +), CAediting_711218(127806344, +), CAediting_711219(127806345, +), CAediting_711220(127806346, +), CAediting_711221(127806352, +), CAediting_711222(127806353, +), CAediting_711223(127806359, +), CAediting_711224(127806385, +), CAediting_711225(127806391, +), CAediting_711226(127806395, +), CAediting_711227(127806418, +), CAediting_711228(127806419, +), CAediting_711229(127806426, +), CAediting_711230(127806427, +), CAediting_711231(127806438, +), CAediting_711232(127806447, +), CAediting_711233(127806456, +), CAediting_711234(127806463, +), CAediting_711235(127806471, +), CAediting_711236(127806481, +), CAediting_711237(127806488, +), CAediting_711238(127806491, +), CAediting_711239(127806493, +), CAediting_711240(127807850, +), CAediting_711241(127807905, +), CAediting_711242(127807910, +), CAediting_711243(127807941, +), CAediting_711244(127807977, +), CAediting_711245(127808004, +), CAediting_711246(127808021, +), CAediting_711247(127808088, +), CAediting_711248(127808101, +), CAediting_711249(127811328, +), CAediting_711250(127811427, +), CAediting_711251(127811547, +), CAediting_711252(127811613, +), CAediting_711253(127812152, +), CAediting_711254(127812472, +), CAediting_711255(127812736, +), CAediting_711256(127812804, +),

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RNA editing positional annotations for FPGS using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_711008	chr9_127794989_+	ncRNA_intronic
CAediting_711009	chr9_127795011_+	ncRNA_intronic
CAediting_711010	chr9_127795012_+	ncRNA_intronic
CAediting_711011	chr9_127795033_+	ncRNA_intronic
CAediting_711012	chr9_127795034_+	ncRNA_intronic
CAediting_711013	chr9_127795047_+	ncRNA_intronic
CAediting_711014	chr9_127795050_+	ncRNA_intronic
CAediting_711015	chr9_127795055_+	ncRNA_intronic
CAediting_711016	chr9_127795058_+	ncRNA_intronic
CAediting_711017	chr9_127795064_+	ncRNA_intronic
CAediting_711018	chr9_127795069_+	ncRNA_intronic
CAediting_711019	chr9_127795078_+	ncRNA_intronic
CAediting_711020	chr9_127795079_+	ncRNA_intronic
CAediting_711021	chr9_127795084_+	ncRNA_intronic
CAediting_711022	chr9_127795087_+	ncRNA_intronic
CAediting_711023	chr9_127795088_+	ncRNA_intronic
CAediting_711024	chr9_127795100_+	ncRNA_intronic
CAediting_711025	chr9_127795103_+	ncRNA_intronic
CAediting_711026	chr9_127795104_+	ncRNA_intronic
CAediting_711027	chr9_127795105_+	ncRNA_intronic
CAediting_711028	chr9_127795106_+	ncRNA_intronic
CAediting_711029	chr9_127795107_+	ncRNA_intronic
CAediting_711030	chr9_127795109_+	ncRNA_intronic
CAediting_711031	chr9_127795111_+	ncRNA_intronic
CAediting_711032	chr9_127795112_+	ncRNA_intronic
CAediting_711033	chr9_127795113_+	ncRNA_intronic
CAediting_711034	chr9_127795114_+	ncRNA_intronic
CAediting_711035	chr9_127795115_+	ncRNA_intronic
CAediting_711036	chr9_127795118_+	ncRNA_intronic
CAediting_711037	chr9_127795138_+	ncRNA_intronic
CAediting_711038	chr9_127795150_+	ncRNA_intronic
CAediting_711039	chr9_127795154_+	ncRNA_intronic
CAediting_711040	chr9_127795155_+	ncRNA_intronic
CAediting_711041	chr9_127795161_+	ncRNA_intronic
CAediting_711042	chr9_127795167_+	ncRNA_intronic
CAediting_711043	chr9_127795174_+	ncRNA_intronic
CAediting_711044	chr9_127795176_+	ncRNA_intronic
CAediting_711045	chr9_127795180_+	ncRNA_intronic
CAediting_711046	chr9_127795185_+	ncRNA_intronic
CAediting_711047	chr9_127795193_+	ncRNA_intronic
CAediting_711048	chr9_127795199_+	ncRNA_intronic
CAediting_711049	chr9_127795210_+	ncRNA_intronic
CAediting_711050	chr9_127795225_+	ncRNA_intronic
CAediting_711051	chr9_127795235_+	ncRNA_intronic
CAediting_711052	chr9_127795244_+	ncRNA_intronic
CAediting_711053	chr9_127795245_+	ncRNA_intronic
CAediting_711054	chr9_127795247_+	ncRNA_intronic
CAediting_711055	chr9_127795253_+	ncRNA_intronic
CAediting_711056	chr9_127795265_+	ncRNA_intronic
CAediting_711057	chr9_127795274_+	ncRNA_intronic
CAediting_711058	chr9_127795296_+	ncRNA_intronic
CAediting_711059	chr9_127795299_+	ncRNA_intronic
CAediting_711060	chr9_127795314_+	ncRNA_intronic
CAediting_711061	chr9_127795315_+	ncRNA_intronic
CAediting_711062	chr9_127795320_+	ncRNA_intronic
CAediting_711063	chr9_127795324_+	ncRNA_intronic
CAediting_711064	chr9_127795337_+	ncRNA_intronic
CAediting_711065	chr9_127795341_+	ncRNA_intronic
CAediting_711066	chr9_127795344_+	ncRNA_intronic
CAediting_711067	chr9_127795347_+	ncRNA_intronic
CAediting_711068	chr9_127795355_+	ncRNA_intronic
CAediting_711069	chr9_127795356_+	ncRNA_intronic
CAediting_711070	chr9_127795376_+	ncRNA_intronic
CAediting_711071	chr9_127795385_+	ncRNA_intronic
CAediting_711072	chr9_127795390_+	ncRNA_intronic
CAediting_711073	chr9_127795399_+	ncRNA_intronic
CAediting_711074	chr9_127795400_+	ncRNA_intronic
CAediting_711075	chr9_127795405_+	ncRNA_intronic
CAediting_711076	chr9_127795414_+	ncRNA_intronic
CAediting_711077	chr9_127795415_+	ncRNA_intronic
CAediting_711078	chr9_127795417_+	ncRNA_intronic
CAediting_711079	chr9_127795419_+	ncRNA_intronic
CAediting_711080	chr9_127795423_+	ncRNA_intronic
CAediting_711081	chr9_127795437_+	ncRNA_intronic
CAediting_711082	chr9_127795447_+	ncRNA_intronic
CAediting_711083	chr9_127795453_+	ncRNA_intronic
CAediting_711084	chr9_127795455_+	ncRNA_intronic
CAediting_711085	chr9_127795473_+	ncRNA_intronic
CAediting_711086	chr9_127795481_+	ncRNA_intronic
CAediting_711087	chr9_127795482_+	ncRNA_intronic
CAediting_711088	chr9_127795487_+	ncRNA_intronic
CAediting_711089	chr9_127795490_+	ncRNA_intronic
CAediting_711090	chr9_127795517_+	ncRNA_intronic
CAediting_711091	chr9_127795520_+	ncRNA_intronic
CAediting_711092	chr9_127795525_+	ncRNA_intronic
CAediting_711093	chr9_127795528_+	ncRNA_intronic
CAediting_711094	chr9_127795530_+	ncRNA_intronic
CAediting_711095	chr9_127795534_+	ncRNA_intronic
CAediting_711096	chr9_127795549_+	ncRNA_intronic
CAediting_711097	chr9_127795551_+	ncRNA_intronic
CAediting_711098	chr9_127795557_+	ncRNA_intronic
CAediting_711099	chr9_127795558_+	ncRNA_intronic
CAediting_711100	chr9_127795559_+	ncRNA_intronic
CAediting_711101	chr9_127795573_+	ncRNA_intronic
CAediting_711102	chr9_127795574_+	ncRNA_intronic
CAediting_711103	chr9_127795575_+	ncRNA_intronic
CAediting_711104	chr9_127795576_+	ncRNA_intronic
CAediting_711105	chr9_127795577_+	ncRNA_intronic
CAediting_711106	chr9_127795581_+	ncRNA_intronic
CAediting_711107	chr9_127795582_+	ncRNA_intronic
CAediting_711108	chr9_127795583_+	ncRNA_intronic
CAediting_711109	chr9_127795585_+	ncRNA_intronic
CAediting_711110	chr9_127795589_+	ncRNA_intronic
CAediting_711111	chr9_127795615_+	ncRNA_intronic
CAediting_711112	chr9_127795625_+	ncRNA_intronic
CAediting_711113	chr9_127795637_+	ncRNA_intronic
CAediting_711114	chr9_127795641_+	ncRNA_intronic
CAediting_711115	chr9_127795644_+	ncRNA_intronic
CAediting_711116	chr9_127795647_+	ncRNA_intronic
CAediting_711117	chr9_127795655_+	ncRNA_intronic
CAediting_711118	chr9_127795656_+	ncRNA_intronic
CAediting_711119	chr9_127795663_+	ncRNA_intronic
CAediting_711120	chr9_127795669_+	ncRNA_intronic
CAediting_711121	chr9_127795676_+	ncRNA_intronic
CAediting_711122	chr9_127795680_+	ncRNA_intronic
CAediting_711123	chr9_127795687_+	ncRNA_intronic
CAediting_711124	chr9_127795695_+	ncRNA_intronic
CAediting_711125	chr9_127795700_+	ncRNA_intronic
CAediting_711126	chr9_127795705_+	ncRNA_intronic
CAediting_711127	chr9_127795715_+	ncRNA_intronic
CAediting_711128	chr9_127795717_+	ncRNA_intronic
CAediting_711129	chr9_127795719_+	ncRNA_intronic
CAediting_711130	chr9_127795723_+	ncRNA_intronic
CAediting_711131	chr9_127796102_+	ncRNA_intronic
CAediting_711132	chr9_127796114_+	ncRNA_intronic
CAediting_711133	chr9_127796190_+	ncRNA_intronic
CAediting_711134	chr9_127796191_+	ncRNA_intronic
CAediting_711135	chr9_127796220_+	ncRNA_intronic
CAediting_711136	chr9_127796229_+	ncRNA_intronic
CAediting_711137	chr9_127796245_+	ncRNA_intronic
CAediting_711138	chr9_127796251_+	ncRNA_intronic
CAediting_711139	chr9_127796252_+	ncRNA_intronic
CAediting_711140	chr9_127796255_+	ncRNA_intronic
CAediting_711141	chr9_127796270_+	ncRNA_intronic
CAediting_711142	chr9_127796287_+	ncRNA_intronic
CAediting_711143	chr9_127796299_+	ncRNA_intronic
CAediting_711144	chr9_127796310_+	ncRNA_intronic
CAediting_711145	chr9_127796352_+	ncRNA_intronic
CAediting_711146	chr9_127797761_+	ncRNA_intronic
CAediting_711147	chr9_127797821_+	ncRNA_intronic
CAediting_711148	chr9_127797830_+	ncRNA_intronic
CAediting_711149	chr9_127797834_+	ncRNA_intronic
CAediting_711150	chr9_127798954_+	ncRNA_intronic
CAediting_711151	chr9_127799032_+	ncRNA_intronic
CAediting_711152	chr9_127799054_+	ncRNA_intronic
CAediting_711153	chr9_127799135_+	ncRNA_intronic
CAediting_711154	chr9_127799972_+	ncRNA_intronic
CAediting_711155	chr9_127800018_+	ncRNA_intronic
CAediting_711156	chr9_127800065_+	ncRNA_intronic
CAediting_711157	chr9_127800066_+	ncRNA_intronic
CAediting_711158	chr9_127800069_+	ncRNA_intronic
CAediting_711159	chr9_127800099_+	ncRNA_intronic
CAediting_711160	chr9_127800105_+	ncRNA_intronic
CAediting_711161	chr9_127800821_+	ncRNA_intronic
CAediting_711162	chr9_127801809_+	ncRNA_intronic
CAediting_711163	chr9_127801866_+	ncRNA_intronic
CAediting_711164	chr9_127804942_+	ncRNA_intronic
CAediting_711165	chr9_127804950_+	ncRNA_intronic
CAediting_711166	chr9_127804969_+	ncRNA_intronic
CAediting_711167	chr9_127804992_+	ncRNA_intronic
CAediting_711168	chr9_127805006_+	ncRNA_intronic
CAediting_711169	chr9_127805015_+	ncRNA_intronic
CAediting_711170	chr9_127805018_+	ncRNA_intronic
CAediting_711171	chr9_127805028_+	ncRNA_intronic
CAediting_711172	chr9_127805046_+	ncRNA_intronic
CAediting_711173	chr9_127805054_+	ncRNA_intronic
CAediting_711174	chr9_127805069_+	ncRNA_intronic
CAediting_711175	chr9_127805072_+	ncRNA_intronic
CAediting_711176	chr9_127805086_+	ncRNA_intronic
CAediting_711177	chr9_127805136_+	ncRNA_intronic
CAediting_711178	chr9_127805151_+	ncRNA_intronic
CAediting_711179	chr9_127805267_+	ncRNA_intronic
CAediting_711180	chr9_127805294_+	ncRNA_intronic
CAediting_711181	chr9_127805306_+	ncRNA_intronic
CAediting_711182	chr9_127805324_+	ncRNA_intronic
CAediting_711183	chr9_127805329_+	ncRNA_intronic
CAediting_711184	chr9_127805344_+	ncRNA_intronic
CAediting_711185	chr9_127805375_+	ncRNA_intronic
CAediting_711186	chr9_127805392_+	ncRNA_intronic
CAediting_711187	chr9_127805398_+	ncRNA_intronic
CAediting_711188	chr9_127805421_+	ncRNA_intronic
CAediting_711189	chr9_127805508_+	ncRNA_intronic
CAediting_711190	chr9_127805509_+	ncRNA_intronic
CAediting_711191	chr9_127805514_+	ncRNA_intronic
CAediting_711192	chr9_127805525_+	ncRNA_intronic
CAediting_711193	chr9_127805530_+	ncRNA_intronic
CAediting_711194	chr9_127805544_+	ncRNA_intronic
CAediting_711195	chr9_127805554_+	ncRNA_intronic
CAediting_711196	chr9_127805578_+	ncRNA_intronic
CAediting_711197	chr9_127806113_+	ncRNA_intronic
CAediting_711198	chr9_127806114_+	ncRNA_intronic
CAediting_711199	chr9_127806137_+	ncRNA_intronic
CAediting_711200	chr9_127806140_+	ncRNA_intronic
CAediting_711201	chr9_127806144_+	ncRNA_intronic
CAediting_711202	chr9_127806167_+	ncRNA_intronic
CAediting_711203	chr9_127806168_+	ncRNA_intronic
CAediting_711204	chr9_127806182_+	ncRNA_intronic
CAediting_711205	chr9_127806183_+	ncRNA_intronic
CAediting_711206	chr9_127806193_+	ncRNA_intronic
CAediting_711207	chr9_127806220_+	ncRNA_intronic
CAediting_711208	chr9_127806250_+	ncRNA_intronic
CAediting_711209	chr9_127806251_+	ncRNA_intronic
CAediting_711210	chr9_127806256_+	ncRNA_intronic
CAediting_711211	chr9_127806289_+	ncRNA_intronic
CAediting_711212	chr9_127806296_+	ncRNA_intronic
CAediting_711213	chr9_127806304_+	ncRNA_intronic
CAediting_711214	chr9_127806320_+	ncRNA_intronic
CAediting_711215	chr9_127806329_+	ncRNA_intronic
CAediting_711216	chr9_127806330_+	ncRNA_intronic
CAediting_711217	chr9_127806341_+	ncRNA_intronic
CAediting_711218	chr9_127806344_+	ncRNA_intronic
CAediting_711219	chr9_127806345_+	ncRNA_intronic
CAediting_711220	chr9_127806346_+	ncRNA_intronic
CAediting_711221	chr9_127806352_+	ncRNA_intronic
CAediting_711222	chr9_127806353_+	ncRNA_intronic
CAediting_711223	chr9_127806359_+	ncRNA_intronic
CAediting_711224	chr9_127806385_+	ncRNA_intronic
CAediting_711225	chr9_127806391_+	ncRNA_intronic
CAediting_711226	chr9_127806395_+	ncRNA_intronic
CAediting_711227	chr9_127806418_+	ncRNA_intronic
CAediting_711228	chr9_127806419_+	ncRNA_intronic
CAediting_711229	chr9_127806426_+	ncRNA_intronic
CAediting_711230	chr9_127806427_+	ncRNA_intronic
CAediting_711231	chr9_127806438_+	ncRNA_intronic
CAediting_711232	chr9_127806447_+	ncRNA_intronic
CAediting_711233	chr9_127806456_+	ncRNA_intronic
CAediting_711234	chr9_127806463_+	ncRNA_intronic
CAediting_711235	chr9_127806471_+	ncRNA_intronic
CAediting_711236	chr9_127806481_+	ncRNA_intronic
CAediting_711237	chr9_127806488_+	ncRNA_intronic
CAediting_711238	chr9_127806491_+	ncRNA_intronic
CAediting_711239	chr9_127806493_+	ncRNA_intronic
CAediting_711240	chr9_127807850_+	ncRNA_intronic
CAediting_711241	chr9_127807905_+	ncRNA_intronic
CAediting_711242	chr9_127807910_+	ncRNA_intronic
CAediting_711243	chr9_127807941_+	ncRNA_intronic
CAediting_711244	chr9_127807977_+	ncRNA_intronic
CAediting_711245	chr9_127808004_+	ncRNA_intronic
CAediting_711246	chr9_127808021_+	ncRNA_intronic
CAediting_711247	chr9_127808088_+	ncRNA_intronic
CAediting_711248	chr9_127808101_+	ncRNA_intronic
CAediting_711249	chr9_127811328_+	ncRNA_intronic
CAediting_711250	chr9_127811427_+	ncRNA_intronic
CAediting_711251	chr9_127811547_+	ncRNA_intronic
CAediting_711252	chr9_127811613_+	ncRNA_intronic
CAediting_711253	chr9_127812152_+	ncRNA_intronic
CAediting_711254	chr9_127812472_+	ncRNA_intronic
CAediting_711255	chr9_127812736_+	ncRNA_intronic
CAediting_711256	chr9_127812804_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_711008	chr9_127794989_+	SINE	Alu	AluSg4
CAediting_711009	chr9_127795011_+	SINE	Alu	AluSg4
CAediting_711010	chr9_127795012_+	SINE	Alu	AluSg4
CAediting_711011	chr9_127795033_+	SINE	Alu	AluSg4
CAediting_711012	chr9_127795034_+	SINE	Alu	AluSg4
CAediting_711013	chr9_127795047_+	SINE	Alu	AluSg4
CAediting_711014	chr9_127795050_+	SINE	Alu	AluSg4
CAediting_711015	chr9_127795055_+	SINE	Alu	AluSg4
CAediting_711016	chr9_127795058_+	SINE	Alu	AluSg4
CAediting_711017	chr9_127795064_+	SINE	Alu	AluSg4
CAediting_711018	chr9_127795069_+	SINE	Alu	AluSg4
CAediting_711019	chr9_127795078_+	SINE	Alu	AluSg4
CAediting_711020	chr9_127795079_+	SINE	Alu	AluSg4
CAediting_711021	chr9_127795084_+	SINE	Alu	AluSg4
CAediting_711022	chr9_127795087_+	SINE	Alu	AluSg4
CAediting_711023	chr9_127795088_+	SINE	Alu	AluSg4
CAediting_711024	chr9_127795100_+	SINE	Alu	AluSg4
CAediting_711025	chr9_127795103_+	SINE	Alu	AluSg4
CAediting_711026	chr9_127795104_+	SINE	Alu	AluSg4
CAediting_711027	chr9_127795105_+	SINE	Alu	AluSg4
CAediting_711028	chr9_127795106_+	SINE	Alu	AluSg4
CAediting_711029	chr9_127795107_+	SINE	Alu	AluSg4
CAediting_711030	chr9_127795109_+	SINE	Alu	AluSg4
CAediting_711031	chr9_127795111_+	SINE	Alu	AluSg4
CAediting_711032	chr9_127795112_+	SINE	Alu	AluSg4
CAediting_711033	chr9_127795113_+	SINE	Alu	AluSg4
CAediting_711034	chr9_127795114_+	SINE	Alu	AluSg4
CAediting_711035	chr9_127795115_+	SINE	Alu	AluSg4
CAediting_711036	chr9_127795118_+	SINE	Alu	AluSg4
CAediting_711037	chr9_127795138_+	SINE	Alu	AluSg4
CAediting_711038	chr9_127795150_+	SINE	Alu	AluSg4
CAediting_711039	chr9_127795154_+	SINE	Alu	AluSg4
CAediting_711040	chr9_127795155_+	SINE	Alu	AluSg4
CAediting_711041	chr9_127795161_+	SINE	Alu	AluSg4
CAediting_711042	chr9_127795167_+	SINE	Alu	AluSg4
CAediting_711043	chr9_127795174_+	SINE	Alu	AluSg4
CAediting_711044	chr9_127795176_+	SINE	Alu	AluSg4
CAediting_711045	chr9_127795180_+	SINE	Alu	AluSg4
CAediting_711046	chr9_127795185_+	SINE	Alu	AluSg4
CAediting_711047	chr9_127795193_+	SINE	Alu	AluSg4
CAediting_711048	chr9_127795199_+	SINE	Alu	AluSg4
CAediting_711049	chr9_127795210_+	SINE	Alu	AluSg4
CAediting_711050	chr9_127795225_+	SINE	Alu	AluSg4
CAediting_711051	chr9_127795235_+	SINE	Alu	AluSg4
CAediting_711052	chr9_127795244_+	SINE	Alu	AluSg4
CAediting_711053	chr9_127795245_+	SINE	Alu	AluSg4
CAediting_711054	chr9_127795247_+	SINE	Alu	AluSg4
CAediting_711055	chr9_127795253_+	SINE	Alu	AluSg4
CAediting_711056	chr9_127795265_+	SINE	Alu	AluSg4
CAediting_711057	chr9_127795274_+	SINE	Alu	AluSg4
CAediting_711058	chr9_127795296_+	SINE	Alu	AluSx
CAediting_711059	chr9_127795299_+	SINE	Alu	AluSx
CAediting_711060	chr9_127795314_+	SINE	Alu	AluSx
CAediting_711061	chr9_127795315_+	SINE	Alu	AluSx
CAediting_711062	chr9_127795320_+	SINE	Alu	AluSx
CAediting_711063	chr9_127795324_+	SINE	Alu	AluSx
CAediting_711064	chr9_127795337_+	SINE	Alu	AluSx
CAediting_711065	chr9_127795341_+	SINE	Alu	AluSx
CAediting_711066	chr9_127795344_+	SINE	Alu	AluSx
CAediting_711067	chr9_127795347_+	SINE	Alu	AluSx
CAediting_711068	chr9_127795355_+	SINE	Alu	AluSx
CAediting_711069	chr9_127795356_+	SINE	Alu	AluSx
CAediting_711070	chr9_127795376_+	SINE	Alu	AluSx
CAediting_711071	chr9_127795385_+	SINE	Alu	AluSx
CAediting_711072	chr9_127795390_+	SINE	Alu	AluSx
CAediting_711073	chr9_127795399_+	SINE	Alu	AluSx
CAediting_711074	chr9_127795400_+	SINE	Alu	AluSx
CAediting_711075	chr9_127795405_+	SINE	Alu	AluSx
CAediting_711076	chr9_127795414_+	SINE	Alu	AluSx
CAediting_711077	chr9_127795415_+	SINE	Alu	AluSx
CAediting_711078	chr9_127795417_+	SINE	Alu	AluSx
CAediting_711079	chr9_127795419_+	SINE	Alu	AluSx
CAediting_711080	chr9_127795423_+	SINE	Alu	AluSx
CAediting_711081	chr9_127795437_+	SINE	Alu	AluSx
CAediting_711082	chr9_127795447_+	SINE	Alu	AluSx
CAediting_711083	chr9_127795453_+	SINE	Alu	AluSx
CAediting_711084	chr9_127795455_+	SINE	Alu	AluSx
CAediting_711085	chr9_127795473_+	SINE	Alu	AluY
CAediting_711086	chr9_127795481_+	SINE	Alu	AluY
CAediting_711087	chr9_127795482_+	SINE	Alu	AluY
CAediting_711088	chr9_127795487_+	SINE	Alu	AluY
CAediting_711089	chr9_127795490_+	SINE	Alu	AluY
CAediting_711090	chr9_127795517_+	SINE	Alu	AluY
CAediting_711091	chr9_127795520_+	SINE	Alu	AluY
CAediting_711092	chr9_127795525_+	SINE	Alu	AluY
CAediting_711093	chr9_127795528_+	SINE	Alu	AluY
CAediting_711094	chr9_127795530_+	SINE	Alu	AluY
CAediting_711095	chr9_127795534_+	SINE	Alu	AluY
CAediting_711096	chr9_127795549_+	SINE	Alu	AluY
CAediting_711097	chr9_127795551_+	SINE	Alu	AluY
CAediting_711098	chr9_127795557_+	SINE	Alu	AluY
CAediting_711099	chr9_127795558_+	SINE	Alu	AluY
CAediting_711100	chr9_127795559_+	SINE	Alu	AluY
CAediting_711101	chr9_127795573_+	SINE	Alu	AluY
CAediting_711102	chr9_127795574_+	SINE	Alu	AluY
CAediting_711103	chr9_127795575_+	SINE	Alu	AluY
CAediting_711104	chr9_127795576_+	SINE	Alu	AluY
CAediting_711105	chr9_127795577_+	SINE	Alu	AluY
CAediting_711106	chr9_127795581_+	SINE	Alu	AluY
CAediting_711107	chr9_127795582_+	SINE	Alu	AluY
CAediting_711108	chr9_127795583_+	SINE	Alu	AluY
CAediting_711109	chr9_127795585_+	SINE	Alu	AluY
CAediting_711110	chr9_127795589_+	SINE	Alu	AluY
CAediting_711111	chr9_127795615_+	SINE	Alu	AluY
CAediting_711112	chr9_127795625_+	SINE	Alu	AluY
CAediting_711113	chr9_127795637_+	SINE	Alu	AluY
CAediting_711114	chr9_127795641_+	SINE	Alu	AluY
CAediting_711115	chr9_127795644_+	SINE	Alu	AluY
CAediting_711116	chr9_127795647_+	SINE	Alu	AluY
CAediting_711117	chr9_127795655_+	SINE	Alu	AluY
CAediting_711118	chr9_127795656_+	SINE	Alu	AluY
CAediting_711119	chr9_127795663_+	SINE	Alu	AluY
CAediting_711120	chr9_127795669_+	SINE	Alu	AluY
CAediting_711121	chr9_127795676_+	SINE	Alu	AluY
CAediting_711122	chr9_127795680_+	SINE	Alu	AluY
CAediting_711123	chr9_127795687_+	SINE	Alu	AluY
CAediting_711124	chr9_127795695_+	SINE	Alu	AluY
CAediting_711125	chr9_127795700_+	SINE	Alu	AluY
CAediting_711126	chr9_127795705_+	SINE	Alu	AluY
CAediting_711127	chr9_127795715_+	SINE	Alu	AluY
CAediting_711128	chr9_127795717_+	SINE	Alu	AluY
CAediting_711129	chr9_127795719_+	SINE	Alu	AluY
CAediting_711130	chr9_127795723_+	SINE	Alu	AluY
CAediting_711131	chr9_127796102_+	SINE	Alu	AluSz
CAediting_711132	chr9_127796114_+	SINE	Alu	AluSz
CAediting_711133	chr9_127796190_+	SINE	Alu	AluSz
CAediting_711134	chr9_127796191_+	SINE	Alu	AluSz
CAediting_711135	chr9_127796220_+	SINE	Alu	AluSz
CAediting_711136	chr9_127796229_+	SINE	Alu	AluSz
CAediting_711137	chr9_127796245_+	SINE	Alu	AluSz
CAediting_711138	chr9_127796251_+	SINE	Alu	AluSz
CAediting_711139	chr9_127796252_+	SINE	Alu	AluSz
CAediting_711140	chr9_127796255_+	SINE	Alu	AluSz
CAediting_711141	chr9_127796270_+	SINE	Alu	AluSz
CAediting_711142	chr9_127796287_+	SINE	Alu	AluSz
CAediting_711143	chr9_127796299_+	SINE	Alu	AluSz
CAediting_711144	chr9_127796310_+	SINE	Alu	AluSz
CAediting_711145	chr9_127796352_+	SINE	Alu	AluSz
CAediting_711146	chr9_127797761_+	SINE	Alu	AluSx
CAediting_711147	chr9_127797821_+	SINE	Alu	AluSx
CAediting_711148	chr9_127797830_+	SINE	Alu	AluSx
CAediting_711149	chr9_127797834_+	SINE	Alu	AluSx
CAediting_711150	chr9_127798954_+	SINE	Alu	AluSz
CAediting_711151	chr9_127799032_+	SINE	Alu	AluSz
CAediting_711152	chr9_127799054_+	SINE	Alu	AluSz
CAediting_711153	chr9_127799135_+	SINE	Alu	AluSz
CAediting_711154	chr9_127799972_+	SINE	Alu	AluJo
CAediting_711155	chr9_127800018_+	SINE	Alu	AluJo
CAediting_711156	chr9_127800065_+	SINE	Alu	AluJo
CAediting_711157	chr9_127800066_+	SINE	Alu	AluJo
CAediting_711158	chr9_127800069_+	SINE	Alu	AluJo
CAediting_711159	chr9_127800099_+	SINE	Alu	AluJo
CAediting_711160	chr9_127800105_+	SINE	Alu	AluJo
CAediting_711161	chr9_127800821_+	SINE	Alu	AluSx
CAediting_711162	chr9_127801809_+	SINE	Alu	AluSg4
CAediting_711163	chr9_127801866_+	SINE	Alu	AluSg4
CAediting_711164	chr9_127804942_+	SINE	Alu	AluSx1
CAediting_711165	chr9_127804950_+	SINE	Alu	AluSx1
CAediting_711166	chr9_127804969_+	SINE	Alu	AluSx1
CAediting_711167	chr9_127804992_+	SINE	Alu	AluSx1
CAediting_711168	chr9_127805006_+	SINE	Alu	AluSx1
CAediting_711169	chr9_127805015_+	SINE	Alu	AluSx1
CAediting_711170	chr9_127805018_+	SINE	Alu	AluSx1
CAediting_711171	chr9_127805028_+	SINE	Alu	AluSx1
CAediting_711172	chr9_127805046_+	SINE	Alu	AluSx1
CAediting_711173	chr9_127805054_+	SINE	Alu	AluSx1
CAediting_711174	chr9_127805069_+	SINE	Alu	AluSx1
CAediting_711175	chr9_127805072_+	SINE	Alu	AluSx1
CAediting_711176	chr9_127805086_+	SINE	Alu	AluSx1
CAediting_711177	chr9_127805136_+	SINE	Alu	AluSx1
CAediting_711178	chr9_127805151_+	SINE	Alu	AluSx1
CAediting_711180	chr9_127805294_+	SINE	Alu	AluJb
CAediting_711181	chr9_127805306_+	SINE	Alu	AluJb
CAediting_711182	chr9_127805324_+	SINE	Alu	AluJb
CAediting_711183	chr9_127805329_+	SINE	Alu	AluJb
CAediting_711184	chr9_127805344_+	SINE	Alu	AluJb
CAediting_711185	chr9_127805375_+	SINE	Alu	AluJb
CAediting_711186	chr9_127805392_+	SINE	Alu	AluJb
CAediting_711187	chr9_127805398_+	SINE	Alu	AluJb
CAediting_711188	chr9_127805421_+	SINE	Alu	AluJb
CAediting_711189	chr9_127805508_+	SINE	Alu	FLAM_C
CAediting_711190	chr9_127805509_+	SINE	Alu	FLAM_C
CAediting_711191	chr9_127805514_+	SINE	Alu	FLAM_C
CAediting_711192	chr9_127805525_+	SINE	Alu	FLAM_C
CAediting_711193	chr9_127805530_+	SINE	Alu	FLAM_C
CAediting_711194	chr9_127805544_+	SINE	Alu	FLAM_C
CAediting_711195	chr9_127805554_+	SINE	Alu	FLAM_C
CAediting_711196	chr9_127805578_+	SINE	Alu	FLAM_C
CAediting_711197	chr9_127806113_+	SINE	Alu	AluSz6
CAediting_711198	chr9_127806114_+	SINE	Alu	AluSz6
CAediting_711199	chr9_127806137_+	SINE	Alu	AluSz6
CAediting_711200	chr9_127806140_+	SINE	Alu	AluSz6
CAediting_711201	chr9_127806144_+	SINE	Alu	AluSz6
CAediting_711202	chr9_127806167_+	SINE	Alu	AluSz6
CAediting_711203	chr9_127806168_+	SINE	Alu	AluSz6
CAediting_711204	chr9_127806182_+	SINE	Alu	AluSz6
CAediting_711205	chr9_127806183_+	SINE	Alu	AluSz6
CAediting_711206	chr9_127806193_+	SINE	Alu	AluSz6
CAediting_711207	chr9_127806220_+	SINE	Alu	AluSz6
CAediting_711208	chr9_127806250_+	SINE	Alu	AluSx
CAediting_711209	chr9_127806251_+	SINE	Alu	AluSx
CAediting_711210	chr9_127806256_+	SINE	Alu	AluSx
CAediting_711211	chr9_127806289_+	SINE	Alu	AluSx
CAediting_711212	chr9_127806296_+	SINE	Alu	AluSx
CAediting_711213	chr9_127806304_+	SINE	Alu	AluSx
CAediting_711214	chr9_127806320_+	SINE	Alu	AluSx
CAediting_711215	chr9_127806329_+	SINE	Alu	AluSx
CAediting_711216	chr9_127806330_+	SINE	Alu	AluSx
CAediting_711217	chr9_127806341_+	SINE	Alu	AluSx
CAediting_711218	chr9_127806344_+	SINE	Alu	AluSx
CAediting_711219	chr9_127806345_+	SINE	Alu	AluSx
CAediting_711220	chr9_127806346_+	SINE	Alu	AluSx
CAediting_711221	chr9_127806352_+	SINE	Alu	AluSx
CAediting_711222	chr9_127806353_+	SINE	Alu	AluSx
CAediting_711223	chr9_127806359_+	SINE	Alu	AluSx
CAediting_711224	chr9_127806385_+	SINE	Alu	AluSx
CAediting_711225	chr9_127806391_+	SINE	Alu	AluSx
CAediting_711226	chr9_127806395_+	SINE	Alu	AluSx
CAediting_711227	chr9_127806418_+	SINE	Alu	AluSx
CAediting_711228	chr9_127806419_+	SINE	Alu	AluSx
CAediting_711229	chr9_127806426_+	SINE	Alu	AluSx
CAediting_711230	chr9_127806427_+	SINE	Alu	AluSx
CAediting_711231	chr9_127806438_+	SINE	Alu	AluSx
CAediting_711232	chr9_127806447_+	SINE	Alu	AluSx
CAediting_711233	chr9_127806456_+	SINE	Alu	AluSx
CAediting_711234	chr9_127806463_+	SINE	Alu	AluSx
CAediting_711235	chr9_127806471_+	SINE	Alu	AluSx
CAediting_711236	chr9_127806481_+	SINE	Alu	AluSx
CAediting_711237	chr9_127806488_+	SINE	Alu	AluSx
CAediting_711238	chr9_127806491_+	SINE	Alu	AluSx
CAediting_711239	chr9_127806493_+	SINE	Alu	AluSx
CAediting_711240	chr9_127807850_+	SINE	Alu	AluSx
CAediting_711241	chr9_127807905_+	SINE	Alu	AluSx
CAediting_711242	chr9_127807910_+	SINE	Alu	AluSx
CAediting_711243	chr9_127807941_+	SINE	Alu	AluSx
CAediting_711244	chr9_127807977_+	SINE	Alu	AluSx
CAediting_711245	chr9_127808004_+	SINE	Alu	AluSx
CAediting_711246	chr9_127808021_+	SINE	Alu	AluSx
CAediting_711247	chr9_127808088_+	SINE	Alu	AluSx
CAediting_711248	chr9_127808101_+	SINE	Alu	AluSx
CAediting_711249	chr9_127811328_+	SINE	Alu	AluY
CAediting_711250	chr9_127811427_+	SINE	Alu	AluY
CAediting_711251	chr9_127811547_+	SINE	Alu	AluSz6
CAediting_711252	chr9_127811613_+	SINE	Alu	AluSz6
CAediting_711253	chr9_127812152_+	SINE	Alu	AluJb
CAediting_711254	chr9_127812472_+	SINE	Alu	AluSx3
CAediting_711255	chr9_127812736_+	SINE	Alu	AluSx
CAediting_711256	chr9_127812804_+	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for FPGS

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_711256	chr9_127812804_+	127812804:127812812	5SS	3+0i	AGTGTGAGC	3.73	GGTGTGAGC	2.37

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000136877.13.FPGS.

Correlation between RNA A-to-I editing and PSI for ENSG00000136877.13.FPGS.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FPGS

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LIHC.CAediting_711087.ENSG00000136877.FPGS.png
Soverview

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Protein coding region RNA A-to-I editings for FPGS

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for FPGS

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000136877.13	ENST00000630236	hsa-miR-624-3p	127813479	127813485	7mer-m8	127813466	127813486	140	-18
CAediting_1229415	chr17_67471547_+	ENSG00000136877.13	ENST00000393706	hsa-miR-548aa	127813688	127813694	7mer-m8	127813671	127813695	150	-16.71
CAediting_1229415	chr17_67471547_+	ENSG00000136877.13	ENST00000630236	hsa-miR-548aa	127813688	127813694	7mer-m8	127813671	127813695	150	-16.71
CAediting_1368054	chr19_46709310_-	ENSG00000136877.13	ENST00000630236	hsa-miR-320e	127813374	127813380	7mer-m8	127813362	127813381	144	-21.09
CAediting_1368054	chr19_46709310_-	ENSG00000136877.13	ENST00000373228	hsa-miR-320e	127813374	127813380	7mer-m8	127813362	127813381	144	-21.09
CAediting_1229415	chr17_67471547_+	ENSG00000136877.13	ENST00000373225	hsa-miR-548aa	127813688	127813694	7mer-m8	127813671	127813695	150	-16.71
CAediting_468389	chr6_31355314_-	ENSG00000136877.13	ENST00000393706	hsa-miR-6891-5p	127813961	127813967	7mer-m8	127813950	127813968	143	-16.51
CAediting_1524209	chrX_134546392_-	ENSG00000136877.13	ENST00000393706	hsa-miR-503-5p	127813912	127813918	7mer-m8	127813897	127813919	156	-23.13
CAediting_468389	chr6_31355314_-	ENSG00000136877.13	ENST00000630236	hsa-miR-6891-5p	127813468	127813475	8mer-1a	127813457	127813475	140	-23.93
CAediting_468389	chr6_31355314_-	ENSG00000136877.13	ENST00000630236	hsa-miR-6891-5p	127813961	127813967	7mer-m8	127813950	127813968	143	-16.51
CAediting_1524209	chrX_134546392_-	ENSG00000136877.13	ENST00000630236	hsa-miR-503-5p	127813235	127813241	7mer-m8	127813220	127813242	157	-27.51
CAediting_1524209	chrX_134546392_-	ENSG00000136877.13	ENST00000630236	hsa-miR-503-5p	127813912	127813918	7mer-m8	127813897	127813919	156	-23.13
CAediting_1524209	chrX_134546392_-	ENSG00000136877.13	ENST00000373228	hsa-miR-503-5p	127813235	127813241	7mer-m8	127813220	127813242	157	-27.51
CAediting_468389	chr6_31355314_-	ENSG00000136877.13	ENST00000373225	hsa-miR-6891-5p	127813961	127813967	7mer-m8	127813950	127813968	143	-16.51
CAediting_1524209	chrX_134546392_-	ENSG00000136877.13	ENST00000373225	hsa-miR-503-5p	127813912	127813918	7mer-m8	127813897	127813919	156	-23.13

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1351755	chr19_40282625_-	ENSG00000136877.13	ENST00000393706	hsa-miR-641	127813754	127813760	7mer-m8	127813738	127813761	140	-14.92
CAediting_1351755	chr19_40282625_-	ENSG00000136877.13	ENST00000630236	hsa-miR-641	127813754	127813760	7mer-m8	127813738	127813761	140	-14.92
CAediting_1351755	chr19_40282625_-	ENSG00000136877.13	ENST00000373225	hsa-miR-641	127813754	127813760	7mer-m8	127813738	127813761	140	-14.92

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FPGS

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for FPGS

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_711036	chr9_127795118_+	0.0381081385386854	0.153855727721587	.	.	.	.
OV	CAediting_711040	chr9_127795155_+	0.00387684093599558	0.338569148012879	.	.	.	.
ESCA	CAediting_711045	chr9_127795180_+	0.0269830294517307	0.230627477711242	.	.	.	.
OV	CAediting_711045	chr9_127795180_+	0.00722885103980649	0.222961006547175	.	.	.	.
OV	CAediting_711061	chr9_127795315_+	.	.	0.0158833476309382	0.323801783288017	.	.
LGG	CAediting_711111	chr9_127795615_+	0.00792130688443676	0.199563271160109	.	.	.	.
BRCA	CAediting_711111	chr9_127795615_+	3.88329489791232e-05	0.250362267735972	.	.	.	.
LIHC	CAediting_711111	chr9_127795615_+	0.00504858125853404	0.346394899390465	.	.	.	.
CESC	CAediting_711111	chr9_127795615_+	0.00250554957575625	0.341878204767628	.	.	.	.
PRAD	CAediting_711111	chr9_127795615_+	0.0109904561203021	0.259848261472671	.	.	.	.
HNSC	CAediting_711111	chr9_127795615_+	0.011503372803301	0.240148710183158	0.00395815967296722	0.272628071587055	.	.
OV	CAediting_711111	chr9_127795615_+	0.00312412982438165	0.205453620123293	.	.	.	.
THYM	CAediting_711111	chr9_127795615_+	0.00785769063359875	0.364690673306558	.	.	0.000308700144842706	0.480809253209675

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Relation with cancer stages for FPGS

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_711039	chr9_127795154_+	0.0110717619215115	0.356401533235104
ESCA	pathologic_stage	CAediting_711111	chr9_127795615_+	0.00217934178027479	0.298688128256697
KIRC	pathologic_stage	CAediting_711111	chr9_127795615_+	0.00535859721301461	0.194296741856717

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Relation with survival for FPGS

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LUAD	CAediting_711045	chr9_127795180_+	0.0115483763470595	0.0198627	65.3416
KIRC	CAediting_711036	chr9_127795118_+	0.0459761073544098	0.040416	0.000464961

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RelatedDrugs for FPGS

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
FPGS	Q05932	DB00293	Raltitrexed	Folylpolyglutamate synthase, mitochondrial	SmallMoleculeDrug	approved\|investigational
FPGS	Q05932	DB00142	Glutamic acid	Folylpolyglutamate synthase, mitochondrial	SmallMoleculeDrug	approved\|nutraceutical

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RelatedDiseases for FPGS

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
FPGS	C0003873	Rheumatoid Arthritis	1	CTD_human
FPGS	C0009402	Colorectal Carcinoma	1	CTD_human
FPGS	C0009404	Colorectal Neoplasms	1	CTD_human
FPGS	C0023452	Childhood Acute Lymphoblastic Leukemia	1	CTD_human
FPGS	C0023453	L2 Acute Lymphoblastic Leukemia	1	CTD_human
FPGS	C0024302	Reticulosarcoma	1	CTD_human
FPGS	C0024304	Lymphoma, Mixed-Cell	1	CTD_human
FPGS	C0024305	Lymphoma, Non-Hodgkin	1	CTD_human
FPGS	C0024306	Lymphoma, Undifferentiated	1	CTD_human
FPGS	C0079740	High Grade Lymphoma (neoplasm)	1	CTD_human
FPGS	C0079741	Lymphoma, Intermediate-Grade	1	CTD_human
FPGS	C0079747	Low Grade Lymphoma (neoplasm)	1	CTD_human
FPGS	C0079757	Diffuse Mixed-Cell Lymphoma	1	CTD_human
FPGS	C0079770	Lymphoma, Small Noncleaved-Cell	1	CTD_human
FPGS	C1961102	Precursor Cell Lymphoblastic Leukemia Lymphoma	1	CTD_human
FPGS	C3714542	Lymphoma, Diffuse	1	CTD_human
FPGS	C4721532	Lymphoma, Non-Hodgkin, Familial	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene