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Editing gene: ITGB3BP (CAeditome ID:23421)

Gene summary for ITGB3BP

Gene summary

Gene information	Gene symbol	ITGB3BP
	Gene ID	23421
	Gene name	integrin subunit beta 3 binding protein
	Synonyms	CENP-R\|CENPR\|HSU37139\|NRIF3\|TAP20
	Cytomap	1p31.3
	Type of gene	protein-coding
	Description	centromere protein Rbeta 3 endonexinbeta3-endonexinintegrin beta 3 binding protein (beta3-endonexin)integrin beta-3-binding proteinnuclear receptor-interacting factor 3
	Modification date	20210518
	UniProtAcc	Q13352
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ITGB3BP	GO:0005654	Centromere protein R	0000052

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RNA A-to-I events for ITGB3BP

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000142856.15

RNA A-to-I editing events in Cancer.

CAediting_71979(63441254, -), CAediting_71980(63441256, -), CAediting_71981(63441300, -), CAediting_71982(63441323, -), CAediting_71983(63441334, -), CAediting_71984(63441335, -), CAediting_71985(63441340, -), CAediting_71986(63441343, -), CAediting_71987(63441349, -), CAediting_71988(63441465, -), CAediting_71989(63441508, -), CAediting_71990(63441509, -), CAediting_71991(63441517, -), CAediting_71992(63441525, -), CAediting_71993(63441536, -), CAediting_71994(63441956, -), CAediting_71995(63441972, -), CAediting_71996(63441976, -), CAediting_71997(63441984, -), CAediting_71998(63442003, -), CAediting_71999(63442006, -), CAediting_72000(63442007, -), CAediting_72001(63442037, -), CAediting_72002(63442083, -), CAediting_72003(63442087, -), CAediting_72004(63442088, -), CAediting_72005(63442089, -), CAediting_72006(63445028, -), CAediting_72007(63445068, -), CAediting_72008(63445164, -), CAediting_72009(63445174, -), CAediting_72010(63445680, -), CAediting_72011(63445719, -), CAediting_72012(63445727, -), CAediting_72013(63445733, -), CAediting_72014(63445768, -), CAediting_72015(63445806, -), CAediting_72016(63445937, -), CAediting_72017(63446172, -), CAediting_72018(63465514, -), CAediting_72019(63467110, -), CAediting_72020(63467449, -), CAediting_72021(63467626, -), CAediting_72022(63475390, -), CAediting_72023(63475468, -), CAediting_72024(63475495, -), CAediting_72025(63475870, -), CAediting_72026(63475886, -), CAediting_72027(63476328, -), CAediting_72028(63477681, -), CAediting_72029(63481258, -), CAediting_72030(63481259, -), CAediting_72031(63481264, -), CAediting_72032(63481273, -), CAediting_72033(63481285, -), CAediting_72034(63481293, -), CAediting_72035(63481294, -), CAediting_72036(63481328, -), CAediting_72037(63481331, -), CAediting_72038(63481333, -), CAediting_72039(63481346, -), CAediting_72040(63481349, -), CAediting_72041(63481358, -), CAediting_72042(63481362, -), CAediting_72043(63482056, -), CAediting_72044(63482093, -), CAediting_72045(63482756, -), CAediting_72046(63482764, -), CAediting_72047(63482769, -), CAediting_72048(63482818, -), CAediting_72049(63482822, -), CAediting_72050(63482823, -), CAediting_72051(63482824, -), CAediting_72052(63482827, -), CAediting_72053(63482921, -), CAediting_72054(63483197, -), CAediting_72055(63483254, -), CAediting_72056(63483292, -), CAediting_72057(63483294, -), CAediting_72058(63483303, -), CAediting_72059(63483307, -), CAediting_72060(63483309, -), CAediting_72061(63483325, -), CAediting_72062(63483329, -), CAediting_72063(63483813, -), CAediting_72064(63483814, -), CAediting_72065(63483853, -), CAediting_72066(63483880, -), CAediting_72067(63483923, -), CAediting_72068(63483924, -), CAediting_72069(63483925, -), CAediting_72070(63483929, -), CAediting_72071(63483942, -), CAediting_72072(63487520, -), CAediting_72073(63487523, -), CAediting_72074(63487704, -), CAediting_72075(63494374, -), CAediting_72076(63494394, -), CAediting_72077(63497243, -), CAediting_72078(63499249, -), CAediting_72079(63499258, -), CAediting_72080(63499259, -), CAediting_72081(63510090, -), CAediting_72082(63510107, -), CAediting_72083(63510151, -), CAediting_72084(63517886, -), CAediting_72085(63584428, -), CAediting_72086(63584446, -), CAediting_72087(63588558, -), CAediting_72088(63589066, -), CAediting_72089(63589074, -), CAediting_72090(63589078, -), CAediting_72091(63589082, -), CAediting_72092(63589103, -), CAediting_72093(63589208, -), CAediting_72094(63589210, -), CAediting_72095(63589277, -), CAediting_72096(63589280, -), CAediting_72097(63589310, -), CAediting_72098(63589583, -), CAediting_72099(63589587, -), CAediting_72100(63589619, -), CAediting_72101(63589622, -), CAediting_72102(63589644, -), CAediting_72103(63589648, -), CAediting_72104(63589649, -), CAediting_72105(63589687, -), CAediting_72106(63590342, -), CAediting_72107(63590344, -), CAediting_72108(63590345, -), CAediting_72109(63590352, -), CAediting_72110(63590356, -), CAediting_72111(63590357, -), CAediting_72112(63590361, -), CAediting_72113(63590364, -), CAediting_72114(63590365, -), CAediting_72115(63590366, -), CAediting_72116(63590367, -), CAediting_72117(63590368, -), CAediting_72118(63590377, -), CAediting_72119(63590383, -), CAediting_72120(63590385, -), CAediting_72121(63590386, -), CAediting_72122(63590394, -), CAediting_72123(63590395, -), CAediting_72124(63590400, -), CAediting_72125(63590406, -), CAediting_72126(63590413, -), CAediting_72127(63590414, -), CAediting_72128(63590418, -), CAediting_72129(63590419, -), CAediting_72130(63590420, -), CAediting_72131(63590743, -), CAediting_72132(63590751, -), CAediting_72133(63590755, -), CAediting_72134(63590756, -), CAediting_72135(63590757, -), CAediting_72136(63590771, -), CAediting_72137(63590786, -), CAediting_72138(63590787, -), CAediting_72139(63590790, -), CAediting_72140(63590802, -), CAediting_72141(63590805, -), CAediting_72142(63590813, -), CAediting_72143(63590818, -), CAediting_72144(63590819, -), CAediting_72145(63590820, -), CAediting_72146(63590822, -), CAediting_72147(63591106, -),

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RNA editing positional annotations for ITGB3BP using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_71979	chr1_63441254_-	ncRNA_intronic
CAediting_71980	chr1_63441256_-	ncRNA_intronic
CAediting_71981	chr1_63441300_-	ncRNA_intronic
CAediting_71982	chr1_63441323_-	ncRNA_intronic
CAediting_71983	chr1_63441334_-	ncRNA_intronic
CAediting_71984	chr1_63441335_-	ncRNA_intronic
CAediting_71985	chr1_63441340_-	ncRNA_intronic
CAediting_71986	chr1_63441343_-	ncRNA_intronic
CAediting_71987	chr1_63441349_-	ncRNA_intronic
CAediting_71988	chr1_63441465_-	ncRNA_intronic
CAediting_71989	chr1_63441508_-	ncRNA_intronic
CAediting_71990	chr1_63441509_-	ncRNA_intronic
CAediting_71991	chr1_63441517_-	ncRNA_intronic
CAediting_71992	chr1_63441525_-	ncRNA_intronic
CAediting_71993	chr1_63441536_-	ncRNA_intronic
CAediting_71994	chr1_63441956_-	ncRNA_intronic
CAediting_71995	chr1_63441972_-	ncRNA_intronic
CAediting_71996	chr1_63441976_-	ncRNA_intronic
CAediting_71997	chr1_63441984_-	ncRNA_intronic
CAediting_71998	chr1_63442003_-	ncRNA_intronic
CAediting_71999	chr1_63442006_-	ncRNA_intronic
CAediting_72000	chr1_63442007_-	ncRNA_intronic
CAediting_72001	chr1_63442037_-	ncRNA_intronic
CAediting_72002	chr1_63442083_-	ncRNA_intronic
CAediting_72003	chr1_63442087_-	ncRNA_intronic
CAediting_72004	chr1_63442088_-	ncRNA_intronic
CAediting_72005	chr1_63442089_-	ncRNA_intronic
CAediting_72006	chr1_63445028_-	ncRNA_intronic
CAediting_72007	chr1_63445068_-	ncRNA_intronic
CAediting_72008	chr1_63445164_-	ncRNA_intronic
CAediting_72009	chr1_63445174_-	ncRNA_intronic
CAediting_72010	chr1_63445680_-	ncRNA_intronic
CAediting_72011	chr1_63445719_-	ncRNA_intronic
CAediting_72012	chr1_63445727_-	ncRNA_intronic
CAediting_72013	chr1_63445733_-	ncRNA_intronic
CAediting_72014	chr1_63445768_-	ncRNA_intronic
CAediting_72015	chr1_63445806_-	ncRNA_intronic
CAediting_72016	chr1_63445937_-	ncRNA_intronic
CAediting_72017	chr1_63446172_-	ncRNA_intronic
CAediting_72018	chr1_63465514_-	ncRNA_intronic
CAediting_72019	chr1_63467110_-	ncRNA_intronic
CAediting_72020	chr1_63467449_-	ncRNA_intronic
CAediting_72021	chr1_63467626_-	ncRNA_intronic
CAediting_72022	chr1_63475390_-	ncRNA_intronic
CAediting_72023	chr1_63475468_-	ncRNA_intronic
CAediting_72024	chr1_63475495_-	ncRNA_intronic
CAediting_72025	chr1_63475870_-	ncRNA_intronic
CAediting_72026	chr1_63475886_-	ncRNA_intronic
CAediting_72027	chr1_63476328_-	ncRNA_intronic
CAediting_72028	chr1_63477681_-	ncRNA_intronic
CAediting_72029	chr1_63481258_-	ncRNA_intronic
CAediting_72030	chr1_63481259_-	ncRNA_intronic
CAediting_72031	chr1_63481264_-	ncRNA_intronic
CAediting_72032	chr1_63481273_-	ncRNA_intronic
CAediting_72033	chr1_63481285_-	ncRNA_intronic
CAediting_72034	chr1_63481293_-	ncRNA_intronic
CAediting_72035	chr1_63481294_-	ncRNA_intronic
CAediting_72036	chr1_63481328_-	ncRNA_intronic
CAediting_72037	chr1_63481331_-	ncRNA_intronic
CAediting_72038	chr1_63481333_-	ncRNA_intronic
CAediting_72039	chr1_63481346_-	ncRNA_intronic
CAediting_72040	chr1_63481349_-	ncRNA_intronic
CAediting_72041	chr1_63481358_-	ncRNA_intronic
CAediting_72042	chr1_63481362_-	ncRNA_intronic
CAediting_72043	chr1_63482056_-	ncRNA_intronic
CAediting_72044	chr1_63482093_-	ncRNA_intronic
CAediting_72045	chr1_63482756_-	ncRNA_intronic
CAediting_72046	chr1_63482764_-	ncRNA_intronic
CAediting_72047	chr1_63482769_-	ncRNA_intronic
CAediting_72048	chr1_63482818_-	ncRNA_intronic
CAediting_72049	chr1_63482822_-	ncRNA_intronic
CAediting_72050	chr1_63482823_-	ncRNA_intronic
CAediting_72051	chr1_63482824_-	ncRNA_intronic
CAediting_72052	chr1_63482827_-	ncRNA_intronic
CAediting_72053	chr1_63482921_-	ncRNA_intronic
CAediting_72054	chr1_63483197_-	ncRNA_intronic
CAediting_72055	chr1_63483254_-	ncRNA_intronic
CAediting_72056	chr1_63483292_-	ncRNA_intronic
CAediting_72057	chr1_63483294_-	ncRNA_intronic
CAediting_72058	chr1_63483303_-	ncRNA_intronic
CAediting_72059	chr1_63483307_-	ncRNA_intronic
CAediting_72060	chr1_63483309_-	ncRNA_intronic
CAediting_72061	chr1_63483325_-	ncRNA_intronic
CAediting_72062	chr1_63483329_-	ncRNA_intronic
CAediting_72063	chr1_63483813_-	ncRNA_intronic
CAediting_72064	chr1_63483814_-	ncRNA_intronic
CAediting_72065	chr1_63483853_-	ncRNA_intronic
CAediting_72066	chr1_63483880_-	ncRNA_intronic
CAediting_72067	chr1_63483923_-	ncRNA_intronic
CAediting_72068	chr1_63483924_-	ncRNA_intronic
CAediting_72069	chr1_63483925_-	ncRNA_intronic
CAediting_72070	chr1_63483929_-	ncRNA_intronic
CAediting_72071	chr1_63483942_-	ncRNA_intronic
CAediting_72072	chr1_63487520_-	ncRNA_intronic
CAediting_72073	chr1_63487523_-	ncRNA_intronic
CAediting_72074	chr1_63487704_-	ncRNA_intronic
CAediting_72075	chr1_63494374_-	ncRNA_intronic
CAediting_72076	chr1_63494394_-	ncRNA_intronic
CAediting_72077	chr1_63497243_-	ncRNA_intronic
CAediting_72078	chr1_63499249_-	ncRNA_intronic
CAediting_72079	chr1_63499258_-	ncRNA_intronic
CAediting_72080	chr1_63499259_-	ncRNA_intronic
CAediting_72081	chr1_63510090_-	exonic
CAediting_72082	chr1_63510107_-	exonic
CAediting_72083	chr1_63510151_-	exonic
CAediting_72084	chr1_63517886_-	ncRNA_intronic
CAediting_72085	chr1_63584428_-	ncRNA_intronic
CAediting_72086	chr1_63584446_-	ncRNA_intronic
CAediting_72087	chr1_63588558_-	ncRNA_intronic
CAediting_72088	chr1_63589066_-	ncRNA_intronic
CAediting_72089	chr1_63589074_-	ncRNA_intronic
CAediting_72090	chr1_63589078_-	ncRNA_intronic
CAediting_72091	chr1_63589082_-	ncRNA_intronic
CAediting_72092	chr1_63589103_-	ncRNA_intronic
CAediting_72093	chr1_63589208_-	ncRNA_intronic
CAediting_72094	chr1_63589210_-	ncRNA_intronic
CAediting_72095	chr1_63589277_-	ncRNA_intronic
CAediting_72096	chr1_63589280_-	ncRNA_intronic
CAediting_72097	chr1_63589310_-	ncRNA_intronic
CAediting_72098	chr1_63589583_-	ncRNA_intronic
CAediting_72099	chr1_63589587_-	ncRNA_intronic
CAediting_72100	chr1_63589619_-	ncRNA_intronic
CAediting_72101	chr1_63589622_-	ncRNA_intronic
CAediting_72102	chr1_63589644_-	ncRNA_intronic
CAediting_72103	chr1_63589648_-	ncRNA_intronic
CAediting_72104	chr1_63589649_-	ncRNA_intronic
CAediting_72105	chr1_63589687_-	ncRNA_intronic
CAediting_72106	chr1_63590342_-	ncRNA_intronic
CAediting_72107	chr1_63590344_-	ncRNA_intronic
CAediting_72108	chr1_63590345_-	ncRNA_intronic
CAediting_72109	chr1_63590352_-	ncRNA_intronic
CAediting_72110	chr1_63590356_-	ncRNA_intronic
CAediting_72111	chr1_63590357_-	ncRNA_intronic
CAediting_72112	chr1_63590361_-	ncRNA_intronic
CAediting_72113	chr1_63590364_-	ncRNA_intronic
CAediting_72114	chr1_63590365_-	ncRNA_intronic
CAediting_72115	chr1_63590366_-	ncRNA_intronic
CAediting_72116	chr1_63590367_-	ncRNA_intronic
CAediting_72117	chr1_63590368_-	ncRNA_intronic
CAediting_72118	chr1_63590377_-	ncRNA_intronic
CAediting_72119	chr1_63590383_-	ncRNA_intronic
CAediting_72120	chr1_63590385_-	ncRNA_intronic
CAediting_72121	chr1_63590386_-	ncRNA_intronic
CAediting_72122	chr1_63590394_-	ncRNA_intronic
CAediting_72123	chr1_63590395_-	ncRNA_intronic
CAediting_72124	chr1_63590400_-	ncRNA_intronic
CAediting_72125	chr1_63590406_-	ncRNA_intronic
CAediting_72126	chr1_63590413_-	ncRNA_intronic
CAediting_72127	chr1_63590414_-	ncRNA_intronic
CAediting_72128	chr1_63590418_-	ncRNA_intronic
CAediting_72129	chr1_63590419_-	ncRNA_intronic
CAediting_72130	chr1_63590420_-	ncRNA_intronic
CAediting_72131	chr1_63590743_-	ncRNA_intronic
CAediting_72132	chr1_63590751_-	ncRNA_intronic
CAediting_72133	chr1_63590755_-	ncRNA_intronic
CAediting_72134	chr1_63590756_-	ncRNA_intronic
CAediting_72135	chr1_63590757_-	ncRNA_intronic
CAediting_72136	chr1_63590771_-	ncRNA_intronic
CAediting_72137	chr1_63590786_-	ncRNA_intronic
CAediting_72138	chr1_63590787_-	ncRNA_intronic
CAediting_72139	chr1_63590790_-	ncRNA_intronic
CAediting_72140	chr1_63590802_-	ncRNA_intronic
CAediting_72141	chr1_63590805_-	ncRNA_intronic
CAediting_72142	chr1_63590813_-	ncRNA_intronic
CAediting_72143	chr1_63590818_-	ncRNA_intronic
CAediting_72144	chr1_63590819_-	ncRNA_intronic
CAediting_72145	chr1_63590820_-	ncRNA_intronic
CAediting_72146	chr1_63590822_-	ncRNA_intronic
CAediting_72147	chr1_63591106_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_71979	chr1_63441254_-	SINE	Alu	AluSg
CAediting_71980	chr1_63441256_-	SINE	Alu	AluSg
CAediting_71981	chr1_63441300_-	SINE	Alu	AluSg
CAediting_71982	chr1_63441323_-	SINE	Alu	AluSg
CAediting_71983	chr1_63441334_-	SINE	Alu	AluSg
CAediting_71984	chr1_63441335_-	SINE	Alu	AluSg
CAediting_71985	chr1_63441340_-	SINE	Alu	AluSg
CAediting_71986	chr1_63441343_-	SINE	Alu	AluSg
CAediting_71987	chr1_63441349_-	SINE	Alu	AluSg
CAediting_71988	chr1_63441465_-	SINE	Alu	AluSg
CAediting_71989	chr1_63441508_-	SINE	Alu	AluSg
CAediting_71990	chr1_63441509_-	SINE	Alu	AluSg
CAediting_71991	chr1_63441517_-	SINE	Alu	AluSg
CAediting_71992	chr1_63441525_-	SINE	Alu	AluSg
CAediting_71994	chr1_63441956_-	SINE	Alu	AluJo
CAediting_71995	chr1_63441972_-	SINE	Alu	AluJo
CAediting_71996	chr1_63441976_-	SINE	Alu	AluJo
CAediting_71997	chr1_63441984_-	SINE	Alu	AluJo
CAediting_71998	chr1_63442003_-	SINE	Alu	AluJo
CAediting_71999	chr1_63442006_-	SINE	Alu	AluJo
CAediting_72000	chr1_63442007_-	SINE	Alu	AluJo
CAediting_72001	chr1_63442037_-	SINE	Alu	AluJo
CAediting_72002	chr1_63442083_-	SINE	Alu	AluJo
CAediting_72003	chr1_63442087_-	SINE	Alu	AluJo
CAediting_72004	chr1_63442088_-	SINE	Alu	AluJo
CAediting_72005	chr1_63442089_-	SINE	Alu	AluJo
CAediting_72006	chr1_63445028_-	SINE	Alu	AluSz
CAediting_72007	chr1_63445068_-	SINE	Alu	AluSz
CAediting_72008	chr1_63445164_-	SINE	Alu	AluSz
CAediting_72009	chr1_63445174_-	SINE	Alu	AluSz
CAediting_72010	chr1_63445680_-	SINE	Alu	AluJo
CAediting_72011	chr1_63445719_-	SINE	Alu	AluJo
CAediting_72012	chr1_63445727_-	SINE	Alu	AluJo
CAediting_72013	chr1_63445733_-	SINE	Alu	AluJo
CAediting_72014	chr1_63445768_-	SINE	Alu	AluJo
CAediting_72015	chr1_63445806_-	SINE	Alu	AluJo
CAediting_72016	chr1_63445937_-	SINE	Alu	AluSz
CAediting_72017	chr1_63446172_-	SINE	Alu	AluSz
CAediting_72018	chr1_63465514_-	SINE	Alu	AluJr
CAediting_72019	chr1_63467110_-	SINE	Alu	AluJr
CAediting_72020	chr1_63467449_-	SINE	Alu	AluJo
CAediting_72021	chr1_63467626_-	SINE	Alu	AluJo
CAediting_72022	chr1_63475390_-	SINE	Alu	AluJr4
CAediting_72023	chr1_63475468_-	SINE	Alu	AluJr4
CAediting_72024	chr1_63475495_-	SINE	Alu	AluJr4
CAediting_72025	chr1_63475870_-	SINE	Alu	AluSx1
CAediting_72026	chr1_63475886_-	SINE	Alu	AluSx1
CAediting_72027	chr1_63476328_-	SINE	Alu	AluSx1
CAediting_72028	chr1_63477681_-	SINE	Alu	AluJb
CAediting_72043	chr1_63482056_-	SINE	Alu	AluSx
CAediting_72044	chr1_63482093_-	SINE	Alu	AluSx
CAediting_72045	chr1_63482756_-	SINE	Alu	AluSz6
CAediting_72046	chr1_63482764_-	SINE	Alu	AluSz6
CAediting_72047	chr1_63482769_-	SINE	Alu	AluSz6
CAediting_72048	chr1_63482818_-	SINE	Alu	AluSz6
CAediting_72049	chr1_63482822_-	SINE	Alu	AluSz6
CAediting_72050	chr1_63482823_-	SINE	Alu	AluSz6
CAediting_72051	chr1_63482824_-	SINE	Alu	AluSz6
CAediting_72052	chr1_63482827_-	SINE	Alu	AluSz6
CAediting_72053	chr1_63482921_-	SINE	Alu	AluSz6
CAediting_72063	chr1_63483813_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72064	chr1_63483814_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72065	chr1_63483853_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72066	chr1_63483880_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72067	chr1_63483923_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72068	chr1_63483924_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72069	chr1_63483925_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72070	chr1_63483929_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72071	chr1_63483942_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72072	chr1_63487520_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72073	chr1_63487523_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72074	chr1_63487704_-	DNA	TcMar-Tigger	Tigger3a
CAediting_72075	chr1_63494374_-	SINE	Alu	AluSx1
CAediting_72076	chr1_63494394_-	SINE	Alu	AluSx1
CAediting_72077	chr1_63497243_-	SINE	Alu	AluJr
CAediting_72078	chr1_63499249_-	SINE	Alu	AluSp
CAediting_72079	chr1_63499258_-	SINE	Alu	AluSp
CAediting_72080	chr1_63499259_-	SINE	Alu	AluSp
CAediting_72081	chr1_63510090_-	SINE	Alu	AluSq2
CAediting_72082	chr1_63510107_-	SINE	Alu	AluSq2
CAediting_72083	chr1_63510151_-	SINE	Alu	AluSq2
CAediting_72084	chr1_63517886_-	SINE	Alu	AluJb
CAediting_72085	chr1_63584428_-	SINE	Alu	AluJr
CAediting_72086	chr1_63584446_-	SINE	Alu	AluJr
CAediting_72087	chr1_63588558_-	LINE	L1	L1MB3
CAediting_72088	chr1_63589066_-	SINE	Alu	AluY
CAediting_72089	chr1_63589074_-	SINE	Alu	AluY
CAediting_72090	chr1_63589078_-	SINE	Alu	AluY
CAediting_72091	chr1_63589082_-	SINE	Alu	AluY
CAediting_72092	chr1_63589103_-	SINE	Alu	AluY
CAediting_72093	chr1_63589208_-	SINE	Alu	AluY
CAediting_72094	chr1_63589210_-	SINE	Alu	AluY
CAediting_72095	chr1_63589277_-	SINE	Alu	AluY
CAediting_72096	chr1_63589280_-	SINE	Alu	AluY
CAediting_72097	chr1_63589310_-	LINE	L2	L2c
CAediting_72098	chr1_63589583_-	SINE	Alu	AluSz6
CAediting_72099	chr1_63589587_-	SINE	Alu	AluSz6
CAediting_72100	chr1_63589619_-	SINE	Alu	AluSz6
CAediting_72101	chr1_63589622_-	SINE	Alu	AluSz6
CAediting_72102	chr1_63589644_-	SINE	Alu	AluSz6
CAediting_72103	chr1_63589648_-	SINE	Alu	AluSz6
CAediting_72104	chr1_63589649_-	SINE	Alu	AluSz6
CAediting_72105	chr1_63589687_-	SINE	Alu	AluSz6
CAediting_72106	chr1_63590342_-	LTR	ERV1	MER95
CAediting_72107	chr1_63590344_-	LTR	ERV1	MER95
CAediting_72108	chr1_63590345_-	LTR	ERV1	MER95
CAediting_72109	chr1_63590352_-	LTR	ERV1	MER95
CAediting_72110	chr1_63590356_-	LTR	ERV1	MER95
CAediting_72111	chr1_63590357_-	LTR	ERV1	MER95
CAediting_72112	chr1_63590361_-	LTR	ERV1	MER95
CAediting_72113	chr1_63590364_-	LTR	ERV1	MER95
CAediting_72114	chr1_63590365_-	LTR	ERV1	MER95
CAediting_72115	chr1_63590366_-	LTR	ERV1	MER95
CAediting_72116	chr1_63590367_-	LTR	ERV1	MER95
CAediting_72117	chr1_63590368_-	LTR	ERV1	MER95
CAediting_72118	chr1_63590377_-	LTR	ERV1	MER95
CAediting_72119	chr1_63590383_-	LTR	ERV1	MER95
CAediting_72120	chr1_63590385_-	LTR	ERV1	MER95
CAediting_72121	chr1_63590386_-	LTR	ERV1	MER95
CAediting_72122	chr1_63590394_-	LTR	ERV1	MER95
CAediting_72123	chr1_63590395_-	LTR	ERV1	MER95
CAediting_72124	chr1_63590400_-	LTR	ERV1	MER95
CAediting_72125	chr1_63590406_-	LTR	ERV1	MER95
CAediting_72126	chr1_63590413_-	LTR	ERV1	MER95
CAediting_72127	chr1_63590414_-	LTR	ERV1	MER95
CAediting_72128	chr1_63590418_-	LTR	ERV1	MER95
CAediting_72129	chr1_63590419_-	LTR	ERV1	MER95
CAediting_72130	chr1_63590420_-	LTR	ERV1	MER95
CAediting_72131	chr1_63590743_-	LTR	ERV1	MER95
CAediting_72132	chr1_63590751_-	LTR	ERV1	MER95
CAediting_72133	chr1_63590755_-	LTR	ERV1	MER95
CAediting_72134	chr1_63590756_-	LTR	ERV1	MER95
CAediting_72135	chr1_63590757_-	LTR	ERV1	MER95
CAediting_72136	chr1_63590771_-	LTR	ERV1	MER95
CAediting_72137	chr1_63590786_-	LTR	ERV1	MER95
CAediting_72138	chr1_63590787_-	LTR	ERV1	MER95
CAediting_72139	chr1_63590790_-	LTR	ERV1	MER95
CAediting_72140	chr1_63590802_-	LTR	ERV1	MER95
CAediting_72141	chr1_63590805_-	LTR	ERV1	MER95
CAediting_72142	chr1_63590813_-	LTR	ERV1	MER95
CAediting_72143	chr1_63590818_-	LTR	ERV1	MER95
CAediting_72144	chr1_63590819_-	LTR	ERV1	MER95
CAediting_72145	chr1_63590820_-	LTR	ERV1	MER95
CAediting_72146	chr1_63590822_-	LTR	ERV1	MER95
CAediting_72147	chr1_63591106_-	DNA	TcMar-Tigger	Tigger4a

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RNA A-to-I editing events in the alternative splicing sites for ITGB3BP

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000142856.15.ITGB3BP.

Correlation between RNA A-to-I editing and PSI for ENSG00000142856.15.ITGB3BP.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ITGB3BP

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

KIRC.CAediting_71983.ENSG00000142856.ITGB3BP.png
Soverview

KIRC.CAediting_71993.ENSG00000142856.ITGB3BP.png
Soverview

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Protein coding region RNA A-to-I editings for ITGB3BP

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ITGB3BP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000142856.15	ENST00000371092	hsa-miR-320e	63440994	63441000	7mer-m8	63440993	63441011	144	-15.02
CAediting_1368054	chr19_46709310_-	ENSG00000142856.15	ENST00000489099	hsa-miR-320e	63440994	63441000	7mer-m8	63440993	63441011	144	-15.02

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ITGB3BP

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000371092.6	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_72081	ENST00000371092.6	chr1_63510090_-	-250.50	-246.50	-256.80
CAediting_72082	ENST00000371092.6	chr1_63510107_-	-246.60	-246.50	-256.80
CAediting_72083	ENST00000371092.6	chr1_63510151_-	-252.70	-246.50	-256.80

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Relation with ADAR for ITGB3BP

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for ITGB3BP

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
OV	clinical_stage	CAediting_71993	chr1_63441536_-	0.0446074564077068	0.214656149779356

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Relation with survival for ITGB3BP

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ITGB3BP

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ITGB3BP

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ITGB3BP	C0014175	Endometriosis	1	CTD_human
ITGB3BP	C0269102	Endometrioma	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene