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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: FNTA (CAeditome ID:2339)

Gene summary for FNTA

check button Gene summary
Gene informationGene symbol

FNTA

Gene ID

2339

Gene namefarnesyltransferase, CAAX box, alpha
SynonymsFPTA|PGGT1A|PTAR2
Cytomap

8p11.21

Type of geneprotein-coding
Descriptionprotein farnesyltransferase/geranylgeranyltransferase type-1 subunit alphaFTase-alphaGGTase-I-alphafarnesyl-protein transferase alpha-subunitprotein prenyltransferase alpha subunit repeat containing 2ras proteins prenyltransferase subunit alphatype
Modification date20210518
UniProtAcc

P49354

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
FNTA

GO:0004660

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

19228685

FNTA

GO:0004660

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

16893176

FNTA

GO:0004661

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

16893176

FNTA

GO:0008017

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

19228685

FNTA

GO:0043014

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

19228685

FNTA

GO:0018343

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

16893176

FNTA

GO:0018343

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

19228685

FNTA

GO:0018344

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

16893176

FNTA

GO:0090044

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

19228685

FNTA

GO:0090045

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

19228685

FNTA

GO:0005875

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

19228685

FNTA

GO:0005953

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

16893176

FNTA

GO:0005965

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

16893176


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RNA A-to-I events for FNTA

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000168522.11
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_636104(43039237, +), CAediting_636105(43049109, +), CAediting_636106(43057694, +), CAediting_636107(43057703, +), CAediting_636108(43057748, +), CAediting_636109(43057757, +), CAediting_636110(43057763, +), CAediting_636111(43057772, +), CAediting_636112(43057780, +), CAediting_636113(43057782, +), CAediting_636114(43057793, +), CAediting_636115(43057802, +), CAediting_636116(43057837, +), CAediting_636117(43057838, +), CAediting_636118(43057843, +), CAediting_636119(43057864, +), CAediting_636120(43057867, +), CAediting_636121(43057879, +), CAediting_636122(43057890, +), CAediting_636123(43057899, +), CAediting_636124(43057903, +), CAediting_636125(43057924, +), CAediting_636126(43058510, +), CAediting_636127(43058517, +), CAediting_636128(43058522, +), CAediting_636129(43058594, +), CAediting_636130(43058614, +), CAediting_636131(43058617, +), CAediting_636132(43058618, +), CAediting_636133(43058623, +), CAediting_636134(43058685, +), CAediting_636135(43060460, +), CAediting_636136(43060465, +), CAediting_636137(43060497, +), CAediting_636138(43060498, +), CAediting_636139(43060510, +), CAediting_636140(43060616, +), CAediting_636141(43061776, +), CAediting_636142(43061781, +), CAediting_636143(43061794, +), CAediting_636144(43061837, +), CAediting_636145(43061899, +), CAediting_636146(43061902, +), CAediting_636147(43061953, +), CAediting_636148(43062304, +), CAediting_636149(43062382, +), CAediting_636150(43062465, +), CAediting_636151(43062516, +), CAediting_636152(43062551, +), CAediting_636153(43062556, +), CAediting_636154(43064498, +), CAediting_636155(43064525, +), CAediting_636156(43064549, +), CAediting_636157(43065010, +), CAediting_636158(43065025, +), CAediting_636159(43065343, +), CAediting_636160(43065499, +), CAediting_636161(43067847, +), CAediting_636162(43067872, +), CAediting_636163(43068085, +), CAediting_636164(43068234, +), CAediting_636165(43068777, +), CAediting_636166(43068813, +), CAediting_636167(43068842, +), CAediting_636168(43069246, +), CAediting_636169(43069300, +), CAediting_636170(43069303, +), CAediting_636171(43069310, +), CAediting_636172(43069317, +), CAediting_636173(43069675, +), CAediting_636174(43069688, +), CAediting_636175(43069695, +), CAediting_636176(43069719, +), CAediting_636177(43069724, +), CAediting_636178(43069744, +), CAediting_636179(43069749, +), CAediting_636180(43069756, +), CAediting_636181(43069774, +), CAediting_636182(43069784, +), CAediting_636183(43069797, +), CAediting_636184(43069810, +), CAediting_636185(43069811, +), CAediting_636186(43069818, +), CAediting_636187(43069824, +), CAediting_636188(43069827, +), CAediting_636189(43069829, +), CAediting_636190(43069844, +), CAediting_636191(43069853, +), CAediting_636192(43069878, +), CAediting_636193(43069896, +), CAediting_636194(43069905, +), CAediting_636195(43069906, +), CAediting_636196(43069918, +), CAediting_636197(43069920, +), CAediting_636198(43069976, +), CAediting_636199(43069998, +), CAediting_636200(43069999, +), CAediting_636201(43070004, +), CAediting_636202(43070021, +), CAediting_636203(43070029, +), CAediting_636204(43070031, +), CAediting_636205(43070034, +), CAediting_636206(43070039, +), CAediting_636207(43070044, +), CAediting_636208(43070067, +), CAediting_636209(43070068, +), CAediting_636210(43070089, +), CAediting_636211(43070093, +), CAediting_636212(43070094, +), CAediting_636213(43070095, +), CAediting_636214(43070096, +), CAediting_636215(43070100, +), CAediting_636216(43070103, +), CAediting_636217(43070107, +), CAediting_636218(43070131, +), CAediting_636219(43070132, +), CAediting_636220(43070137, +), CAediting_636221(43070175, +), CAediting_636222(43070189, +), CAediting_636223(43070190, +), CAediting_636224(43070199, +), CAediting_636225(43070203, +), CAediting_636226(43070214, +), CAediting_636227(43070220, +), CAediting_636228(43070223, +), CAediting_636229(43070228, +), CAediting_636230(43070229, +), CAediting_636231(43070253, +), CAediting_636232(43070258, +), CAediting_636233(43070260, +), CAediting_636234(43070265, +), CAediting_636235(43072492, +), CAediting_636236(43072606, +), CAediting_636237(43072612, +), CAediting_636238(43072629, +), CAediting_636239(43074418, +), CAediting_636240(43074431, +), CAediting_636241(43074437, +), CAediting_636242(43074440, +), CAediting_636243(43074451, +), CAediting_636244(43075689, +), CAediting_636245(43075943, +), CAediting_636246(43075948, +), CAediting_636247(43076067, +), CAediting_636248(43076183, +), CAediting_636249(43076306, +), CAediting_636250(43076429, +), CAediting_636251(43077712, +), CAediting_636252(43077725, +), CAediting_636253(43078668, +), CAediting_636254(43079872, +), CAediting_636255(43079917, +), CAediting_636256(43080160, +), CAediting_636257(43081596, +), CAediting_636258(43081615, +), CAediting_636259(43081620, +), CAediting_636260(43081624, +), CAediting_636261(43081633, +), CAediting_636262(43081650, +), CAediting_636263(43081658, +), CAediting_636264(43081663, +), CAediting_636265(43081676, +), CAediting_636266(43081681, +), CAediting_636267(43081692, +), CAediting_636268(43081699, +), CAediting_636269(43081702, +), CAediting_636270(43081704, +), CAediting_636271(43081708, +), CAediting_636272(43081754, +), CAediting_636273(43081773, +), CAediting_636274(43081775, +), CAediting_636275(43081802, +), CAediting_636276(43081826, +), CAediting_636277(43081838, +), CAediting_636278(43081840, +), CAediting_636279(43081860, +), CAediting_636280(43082756, +), CAediting_636281(43082792, +), CAediting_636282(43082793, +), CAediting_636283(43082801, +), CAediting_636284(43082819, +), CAediting_636285(43082845, +), CAediting_636286(43082862, +), CAediting_636287(43082869, +), CAediting_636288(43082870, +), CAediting_636289(43082881, +), CAediting_636290(43082886, +), CAediting_636291(43082899, +), CAediting_636292(43082925, +), CAediting_636293(43082931, +), CAediting_636294(43082952, +), CAediting_636295(43082961, +), CAediting_636296(43082966, +), CAediting_636297(43082967, +), CAediting_636298(43083006, +), CAediting_636299(43083016, +), CAediting_636300(43083033, +), CAediting_636301(43083034, +), CAediting_636302(43083804, +), CAediting_636303(43083818, +), CAediting_636304(43083858, +), CAediting_636305(43083953, +), CAediting_636306(43083975, +), CAediting_636307(43083976, +), CAediting_636308(43084017, +), CAediting_636309(43084021, +), CAediting_636310(43084022, +), CAediting_636311(43084313, +), CAediting_636312(43084337, +), CAediting_636313(43084402, +), CAediting_636314(43084405, +), CAediting_636315(43084456, +), CAediting_636316(43084457, +), CAediting_636317(43084498, +),

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RNA editing positional annotations for FNTA using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_636104chr8_43039237_+ncRNA_intronic
CAediting_636105chr8_43049109_+ncRNA_intronic
CAediting_636106chr8_43057694_+ncRNA_intronic
CAediting_636107chr8_43057703_+ncRNA_intronic
CAediting_636108chr8_43057748_+ncRNA_intronic
CAediting_636109chr8_43057757_+ncRNA_intronic
CAediting_636110chr8_43057763_+ncRNA_intronic
CAediting_636111chr8_43057772_+ncRNA_intronic
CAediting_636112chr8_43057780_+ncRNA_intronic
CAediting_636113chr8_43057782_+ncRNA_intronic
CAediting_636114chr8_43057793_+ncRNA_intronic
CAediting_636115chr8_43057802_+ncRNA_intronic
CAediting_636116chr8_43057837_+ncRNA_intronic
CAediting_636117chr8_43057838_+ncRNA_intronic
CAediting_636118chr8_43057843_+ncRNA_intronic
CAediting_636119chr8_43057864_+ncRNA_intronic
CAediting_636120chr8_43057867_+ncRNA_intronic
CAediting_636121chr8_43057879_+ncRNA_intronic
CAediting_636122chr8_43057890_+ncRNA_intronic
CAediting_636123chr8_43057899_+ncRNA_intronic
CAediting_636124chr8_43057903_+ncRNA_intronic
CAediting_636125chr8_43057924_+ncRNA_intronic
CAediting_636126chr8_43058510_+ncRNA_intronic
CAediting_636127chr8_43058517_+ncRNA_intronic
CAediting_636128chr8_43058522_+ncRNA_intronic
CAediting_636129chr8_43058594_+ncRNA_intronic
CAediting_636130chr8_43058614_+ncRNA_intronic
CAediting_636131chr8_43058617_+ncRNA_intronic
CAediting_636132chr8_43058618_+ncRNA_intronic
CAediting_636133chr8_43058623_+ncRNA_intronic
CAediting_636134chr8_43058685_+ncRNA_intronic
CAediting_636135chr8_43060460_+ncRNA_intronic
CAediting_636136chr8_43060465_+ncRNA_intronic
CAediting_636137chr8_43060497_+ncRNA_intronic
CAediting_636138chr8_43060498_+ncRNA_intronic
CAediting_636139chr8_43060510_+ncRNA_intronic
CAediting_636140chr8_43060616_+ncRNA_intronic
CAediting_636141chr8_43061776_+ncRNA_intronic
CAediting_636142chr8_43061781_+ncRNA_intronic
CAediting_636143chr8_43061794_+ncRNA_intronic
CAediting_636144chr8_43061837_+ncRNA_intronic
CAediting_636145chr8_43061899_+ncRNA_intronic
CAediting_636146chr8_43061902_+ncRNA_intronic
CAediting_636147chr8_43061953_+ncRNA_intronic
CAediting_636148chr8_43062304_+ncRNA_intronic
CAediting_636149chr8_43062382_+ncRNA_intronic
CAediting_636150chr8_43062465_+ncRNA_intronic
CAediting_636151chr8_43062516_+ncRNA_intronic
CAediting_636152chr8_43062551_+ncRNA_intronic
CAediting_636153chr8_43062556_+ncRNA_intronic
CAediting_636154chr8_43064498_+ncRNA_intronic
CAediting_636155chr8_43064525_+ncRNA_intronic
CAediting_636156chr8_43064549_+ncRNA_intronic
CAediting_636157chr8_43065010_+ncRNA_intronic
CAediting_636158chr8_43065025_+ncRNA_intronic
CAediting_636159chr8_43065343_+ncRNA_intronic
CAediting_636160chr8_43065499_+ncRNA_intronic
CAediting_636161chr8_43067847_+ncRNA_intronic
CAediting_636162chr8_43067872_+ncRNA_intronic
CAediting_636163chr8_43068085_+ncRNA_intronic
CAediting_636164chr8_43068234_+ncRNA_intronic
CAediting_636165chr8_43068777_+ncRNA_intronic
CAediting_636166chr8_43068813_+ncRNA_intronic
CAediting_636167chr8_43068842_+ncRNA_intronic
CAediting_636168chr8_43069246_+ncRNA_intronic
CAediting_636169chr8_43069300_+ncRNA_intronic
CAediting_636170chr8_43069303_+ncRNA_intronic
CAediting_636171chr8_43069310_+ncRNA_intronic
CAediting_636172chr8_43069317_+ncRNA_intronic
CAediting_636173chr8_43069675_+ncRNA_intronic
CAediting_636174chr8_43069688_+ncRNA_intronic
CAediting_636175chr8_43069695_+ncRNA_intronic
CAediting_636176chr8_43069719_+ncRNA_intronic
CAediting_636177chr8_43069724_+ncRNA_intronic
CAediting_636178chr8_43069744_+ncRNA_intronic
CAediting_636179chr8_43069749_+ncRNA_intronic
CAediting_636180chr8_43069756_+ncRNA_intronic
CAediting_636181chr8_43069774_+ncRNA_intronic
CAediting_636182chr8_43069784_+ncRNA_intronic
CAediting_636183chr8_43069797_+ncRNA_intronic
CAediting_636184chr8_43069810_+ncRNA_intronic
CAediting_636185chr8_43069811_+ncRNA_intronic
CAediting_636186chr8_43069818_+ncRNA_intronic
CAediting_636187chr8_43069824_+ncRNA_intronic
CAediting_636188chr8_43069827_+ncRNA_intronic
CAediting_636189chr8_43069829_+ncRNA_intronic
CAediting_636190chr8_43069844_+ncRNA_intronic
CAediting_636191chr8_43069853_+ncRNA_intronic
CAediting_636192chr8_43069878_+ncRNA_intronic
CAediting_636193chr8_43069896_+ncRNA_intronic
CAediting_636194chr8_43069905_+ncRNA_intronic
CAediting_636195chr8_43069906_+ncRNA_intronic
CAediting_636196chr8_43069918_+ncRNA_intronic
CAediting_636197chr8_43069920_+ncRNA_intronic
CAediting_636198chr8_43069976_+ncRNA_intronic
CAediting_636199chr8_43069998_+ncRNA_intronic
CAediting_636200chr8_43069999_+ncRNA_intronic
CAediting_636201chr8_43070004_+ncRNA_intronic
CAediting_636202chr8_43070021_+ncRNA_intronic
CAediting_636203chr8_43070029_+ncRNA_intronic
CAediting_636204chr8_43070031_+ncRNA_intronic
CAediting_636205chr8_43070034_+ncRNA_intronic
CAediting_636206chr8_43070039_+ncRNA_intronic
CAediting_636207chr8_43070044_+ncRNA_intronic
CAediting_636208chr8_43070067_+ncRNA_intronic
CAediting_636209chr8_43070068_+ncRNA_intronic
CAediting_636210chr8_43070089_+ncRNA_intronic
CAediting_636211chr8_43070093_+ncRNA_intronic
CAediting_636212chr8_43070094_+ncRNA_intronic
CAediting_636213chr8_43070095_+ncRNA_intronic
CAediting_636214chr8_43070096_+ncRNA_intronic
CAediting_636215chr8_43070100_+ncRNA_splicing
CAediting_636216chr8_43070103_+ncRNA_exonic
CAediting_636217chr8_43070107_+ncRNA_exonic
CAediting_636218chr8_43070131_+ncRNA_exonic
CAediting_636219chr8_43070132_+ncRNA_exonic
CAediting_636220chr8_43070137_+ncRNA_exonic
CAediting_636221chr8_43070175_+ncRNA_exonic
CAediting_636222chr8_43070189_+ncRNA_exonic
CAediting_636223chr8_43070190_+ncRNA_exonic
CAediting_636224chr8_43070199_+ncRNA_exonic
CAediting_636225chr8_43070203_+ncRNA_exonic
CAediting_636226chr8_43070214_+ncRNA_exonic
CAediting_636227chr8_43070220_+ncRNA_exonic
CAediting_636228chr8_43070223_+ncRNA_exonic
CAediting_636229chr8_43070228_+ncRNA_exonic
CAediting_636230chr8_43070229_+ncRNA_exonic
CAediting_636231chr8_43070253_+ncRNA_exonic
CAediting_636232chr8_43070258_+ncRNA_exonic
CAediting_636233chr8_43070260_+ncRNA_exonic
CAediting_636234chr8_43070265_+ncRNA_exonic
CAediting_636235chr8_43072492_+ncRNA_intronic
CAediting_636236chr8_43072606_+ncRNA_intronic
CAediting_636237chr8_43072612_+ncRNA_intronic
CAediting_636238chr8_43072629_+ncRNA_intronic
CAediting_636239chr8_43074418_+ncRNA_intronic
CAediting_636240chr8_43074431_+ncRNA_intronic
CAediting_636241chr8_43074437_+ncRNA_intronic
CAediting_636242chr8_43074440_+ncRNA_intronic
CAediting_636243chr8_43074451_+ncRNA_intronic
CAediting_636244chr8_43075689_+ncRNA_intronic
CAediting_636245chr8_43075943_+ncRNA_intronic
CAediting_636246chr8_43075948_+ncRNA_intronic
CAediting_636247chr8_43076067_+ncRNA_intronic
CAediting_636248chr8_43076183_+ncRNA_intronic
CAediting_636249chr8_43076306_+ncRNA_intronic
CAediting_636250chr8_43076429_+ncRNA_intronic
CAediting_636251chr8_43077712_+ncRNA_exonic
CAediting_636252chr8_43077725_+ncRNA_exonic
CAediting_636253chr8_43078668_+ncRNA_exonic
CAediting_636254chr8_43079872_+ncRNA_exonic
CAediting_636255chr8_43079917_+ncRNA_exonic
CAediting_636256chr8_43080160_+ncRNA_exonic
CAediting_636257chr8_43081596_+ncRNA_exonic
CAediting_636258chr8_43081615_+ncRNA_exonic
CAediting_636259chr8_43081620_+ncRNA_exonic
CAediting_636260chr8_43081624_+ncRNA_exonic
CAediting_636261chr8_43081633_+ncRNA_exonic
CAediting_636262chr8_43081650_+ncRNA_exonic
CAediting_636263chr8_43081658_+ncRNA_exonic
CAediting_636264chr8_43081663_+ncRNA_exonic
CAediting_636265chr8_43081676_+ncRNA_exonic
CAediting_636266chr8_43081681_+ncRNA_exonic
CAediting_636267chr8_43081692_+ncRNA_exonic
CAediting_636268chr8_43081699_+ncRNA_exonic
CAediting_636269chr8_43081702_+ncRNA_exonic
CAediting_636270chr8_43081704_+ncRNA_exonic
CAediting_636271chr8_43081708_+ncRNA_exonic
CAediting_636272chr8_43081754_+ncRNA_exonic
CAediting_636273chr8_43081773_+ncRNA_exonic
CAediting_636274chr8_43081775_+ncRNA_exonic
CAediting_636275chr8_43081802_+ncRNA_exonic
CAediting_636276chr8_43081826_+ncRNA_exonic
CAediting_636277chr8_43081838_+ncRNA_exonic
CAediting_636278chr8_43081840_+ncRNA_exonic
CAediting_636279chr8_43081860_+ncRNA_exonic
CAediting_636280chr8_43082756_+ncRNA_exonic
CAediting_636281chr8_43082792_+ncRNA_exonic
CAediting_636282chr8_43082793_+ncRNA_exonic
CAediting_636283chr8_43082801_+ncRNA_exonic
CAediting_636284chr8_43082819_+ncRNA_exonic
CAediting_636285chr8_43082845_+ncRNA_exonic
CAediting_636286chr8_43082862_+ncRNA_exonic
CAediting_636287chr8_43082869_+ncRNA_exonic
CAediting_636288chr8_43082870_+ncRNA_exonic
CAediting_636289chr8_43082881_+ncRNA_exonic
CAediting_636290chr8_43082886_+ncRNA_exonic
CAediting_636291chr8_43082899_+ncRNA_exonic
CAediting_636292chr8_43082925_+ncRNA_exonic
CAediting_636293chr8_43082931_+ncRNA_exonic
CAediting_636294chr8_43082952_+ncRNA_exonic
CAediting_636295chr8_43082961_+ncRNA_exonic
CAediting_636296chr8_43082966_+ncRNA_exonic
CAediting_636297chr8_43082967_+ncRNA_exonic
CAediting_636298chr8_43083006_+ncRNA_exonic
CAediting_636299chr8_43083016_+ncRNA_exonic
CAediting_636300chr8_43083033_+ncRNA_exonic
CAediting_636301chr8_43083034_+ncRNA_exonic
CAediting_636302chr8_43083804_+ncRNA_intronic
CAediting_636303chr8_43083818_+ncRNA_intronic
CAediting_636304chr8_43083858_+ncRNA_intronic
CAediting_636305chr8_43083953_+ncRNA_intronic
CAediting_636306chr8_43083975_+ncRNA_intronic
CAediting_636307chr8_43083976_+ncRNA_intronic
CAediting_636308chr8_43084017_+ncRNA_intronic
CAediting_636309chr8_43084021_+ncRNA_intronic
CAediting_636310chr8_43084022_+ncRNA_intronic
CAediting_636311chr8_43084313_+ncRNA_intronic
CAediting_636312chr8_43084337_+ncRNA_intronic
CAediting_636313chr8_43084402_+ncRNA_intronic
CAediting_636314chr8_43084405_+ncRNA_intronic
CAediting_636315chr8_43084456_+ncRNA_intronic
CAediting_636316chr8_43084457_+ncRNA_intronic
CAediting_636317chr8_43084498_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_636104chr8_43039237_+SINEAluAluSc
CAediting_636105chr8_43049109_+SINEAluAluJo
CAediting_636106chr8_43057694_+SINEAluAluSq2
CAediting_636107chr8_43057703_+SINEAluAluSq2
CAediting_636108chr8_43057748_+SINEAluAluSq2
CAediting_636109chr8_43057757_+SINEAluAluSq2
CAediting_636110chr8_43057763_+SINEAluAluSq2
CAediting_636111chr8_43057772_+SINEAluAluSq2
CAediting_636112chr8_43057780_+SINEAluAluSq2
CAediting_636113chr8_43057782_+SINEAluAluSq2
CAediting_636114chr8_43057793_+SINEAluAluSq2
CAediting_636115chr8_43057802_+SINEAluAluSq2
CAediting_636116chr8_43057837_+SINEAluAluSq2
CAediting_636117chr8_43057838_+SINEAluAluSq2
CAediting_636118chr8_43057843_+SINEAluAluSq2
CAediting_636119chr8_43057864_+SINEAluAluSq2
CAediting_636120chr8_43057867_+SINEAluAluSq2
CAediting_636121chr8_43057879_+SINEAluAluSq2
CAediting_636122chr8_43057890_+SINEAluAluSq2
CAediting_636123chr8_43057899_+SINEAluAluSq2
CAediting_636124chr8_43057903_+SINEAluAluSq2
CAediting_636125chr8_43057924_+SINEAluAluSq2
CAediting_636126chr8_43058510_+SINEAluAluSc
CAediting_636127chr8_43058517_+SINEAluAluSc
CAediting_636128chr8_43058522_+SINEAluAluSc
CAediting_636129chr8_43058594_+SINEAluAluSc
CAediting_636130chr8_43058614_+SINEAluAluSc
CAediting_636131chr8_43058617_+SINEAluAluSc
CAediting_636132chr8_43058618_+SINEAluAluSc
CAediting_636133chr8_43058623_+SINEAluAluSc
CAediting_636134chr8_43058685_+SINEAluAluSc
CAediting_636135chr8_43060460_+SINEAluAluSq2
CAediting_636136chr8_43060465_+SINEAluAluSq2
CAediting_636137chr8_43060497_+SINEAluAluSq2
CAediting_636138chr8_43060498_+SINEAluAluSq2
CAediting_636139chr8_43060510_+SINEAluAluSq2
CAediting_636140chr8_43060616_+SINEAluAluSq2
CAediting_636141chr8_43061776_+SINEAluAluSp
CAediting_636142chr8_43061781_+SINEAluAluSp
CAediting_636143chr8_43061794_+SINEAluAluSp
CAediting_636144chr8_43061837_+SINEAluAluSp
CAediting_636145chr8_43061899_+SINEAluAluSp
CAediting_636146chr8_43061902_+SINEAluAluSp
CAediting_636147chr8_43061953_+SINEAluAluSp
CAediting_636148chr8_43062304_+SINEAluAluSq2
CAediting_636149chr8_43062382_+SINEAluAluSq2
CAediting_636150chr8_43062465_+SINEAluAluSq2
CAediting_636151chr8_43062516_+SINEAluAluSq2
CAediting_636152chr8_43062551_+SINEAluAluSq2
CAediting_636153chr8_43062556_+SINEAluAluSq2
CAediting_636154chr8_43064498_+SINEAluAluSq2
CAediting_636155chr8_43064525_+SINEAluAluSq2
CAediting_636156chr8_43064549_+SINEAluAluSq2
CAediting_636157chr8_43065010_+SINEAluAluSg
CAediting_636158chr8_43065025_+SINEAluAluSg
CAediting_636159chr8_43065343_+SINEAluAluSq
CAediting_636160chr8_43065499_+SINEAluAluSq
CAediting_636161chr8_43067847_+SINEAluAluSz6
CAediting_636162chr8_43067872_+SINEAluAluSz6
CAediting_636163chr8_43068085_+SINEAluAluSx3
CAediting_636164chr8_43068234_+SINEAluAluSz6
CAediting_636165chr8_43068777_+SINEAluAluSp
CAediting_636166chr8_43068813_+SINEAluAluSp
CAediting_636167chr8_43068842_+SINEAluAluSp
CAediting_636168chr8_43069246_+SINEAluAluSx3
CAediting_636169chr8_43069300_+SINEAluAluSx3
CAediting_636170chr8_43069303_+SINEAluAluSx3
CAediting_636171chr8_43069310_+SINEAluAluSx3
CAediting_636172chr8_43069317_+SINEAluAluSx3
CAediting_636173chr8_43069675_+SINEAluAluSx
CAediting_636174chr8_43069688_+SINEAluAluSx
CAediting_636175chr8_43069695_+SINEAluAluSx
CAediting_636176chr8_43069719_+SINEAluAluSx
CAediting_636177chr8_43069724_+SINEAluAluSx
CAediting_636178chr8_43069744_+SINEAluAluSx
CAediting_636179chr8_43069749_+SINEAluAluSx
CAediting_636180chr8_43069756_+SINEAluAluSx
CAediting_636181chr8_43069774_+SINEAluAluSx
CAediting_636182chr8_43069784_+SINEAluAluSx
CAediting_636183chr8_43069797_+SINEAluAluSx
CAediting_636184chr8_43069810_+SINEAluAluSx
CAediting_636185chr8_43069811_+SINEAluAluSx
CAediting_636186chr8_43069818_+SINEAluAluSx
CAediting_636187chr8_43069824_+SINEAluAluSx
CAediting_636188chr8_43069827_+SINEAluAluSx
CAediting_636189chr8_43069829_+SINEAluAluSx
CAediting_636190chr8_43069844_+SINEAluAluSx
CAediting_636191chr8_43069853_+SINEAluAluSx
CAediting_636192chr8_43069878_+SINEAluAluSx
CAediting_636193chr8_43069896_+SINEAluAluSx
CAediting_636194chr8_43069905_+SINEAluAluSx
CAediting_636195chr8_43069906_+SINEAluAluSx
CAediting_636196chr8_43069918_+SINEAluAluSx
CAediting_636197chr8_43069920_+SINEAluAluSx
CAediting_636198chr8_43069976_+SINEAluAluSz
CAediting_636199chr8_43069998_+SINEAluAluSz
CAediting_636200chr8_43069999_+SINEAluAluSz
CAediting_636201chr8_43070004_+SINEAluAluSz
CAediting_636202chr8_43070021_+SINEAluAluSz
CAediting_636203chr8_43070029_+SINEAluAluSz
CAediting_636204chr8_43070031_+SINEAluAluSz
CAediting_636205chr8_43070034_+SINEAluAluSz
CAediting_636206chr8_43070039_+SINEAluAluSz
CAediting_636207chr8_43070044_+SINEAluAluSz
CAediting_636208chr8_43070067_+SINEAluAluSz
CAediting_636209chr8_43070068_+SINEAluAluSz
CAediting_636210chr8_43070089_+SINEAluAluSz
CAediting_636211chr8_43070093_+SINEAluAluSz
CAediting_636212chr8_43070094_+SINEAluAluSz
CAediting_636213chr8_43070095_+SINEAluAluSz
CAediting_636214chr8_43070096_+SINEAluAluSz
CAediting_636215chr8_43070100_+SINEAluAluSz
CAediting_636216chr8_43070103_+SINEAluAluSz
CAediting_636217chr8_43070107_+SINEAluAluSz
CAediting_636218chr8_43070131_+SINEAluAluSz
CAediting_636219chr8_43070132_+SINEAluAluSz
CAediting_636220chr8_43070137_+SINEAluAluSz
CAediting_636221chr8_43070175_+SINEAluAluSz
CAediting_636222chr8_43070189_+SINEAluAluSz
CAediting_636223chr8_43070190_+SINEAluAluSz
CAediting_636224chr8_43070199_+SINEAluAluSz
CAediting_636225chr8_43070203_+SINEAluAluSz
CAediting_636226chr8_43070214_+SINEAluAluSz
CAediting_636227chr8_43070220_+SINEAluAluSz
CAediting_636228chr8_43070223_+SINEAluAluSz
CAediting_636229chr8_43070228_+SINEAluAluSz
CAediting_636230chr8_43070229_+SINEAluAluSz
CAediting_636231chr8_43070253_+SINEAluAluSz
CAediting_636232chr8_43070258_+SINEAluAluSz
CAediting_636233chr8_43070260_+SINEAluAluSz
CAediting_636234chr8_43070265_+SINEAluAluSz
CAediting_636235chr8_43072492_+SINEAluAluJo
CAediting_636236chr8_43072606_+SINEAluAluJo
CAediting_636237chr8_43072612_+SINEAluAluJo
CAediting_636238chr8_43072629_+SINEAluAluJo
CAediting_636239chr8_43074418_+SINEAluAluJo
CAediting_636240chr8_43074431_+SINEAluAluJo
CAediting_636241chr8_43074437_+SINEAluAluJo
CAediting_636242chr8_43074440_+SINEAluAluJo
CAediting_636243chr8_43074451_+SINEAluAluJo
CAediting_636244chr8_43075689_+SINEAluAluSz
CAediting_636245chr8_43075943_+SINEAluAluJr
CAediting_636246chr8_43075948_+SINEAluAluJr
CAediting_636247chr8_43076067_+SINEAluAluSx1
CAediting_636248chr8_43076183_+SINEAluAluSx1
CAediting_636249chr8_43076306_+SINEAluAluSx1
CAediting_636250chr8_43076429_+SINEAluAluJr
CAediting_636251chr8_43077712_+DNAhAT-CharlieMER20
CAediting_636252chr8_43077725_+DNAhAT-CharlieMER20
CAediting_636253chr8_43078668_+DNATcMar-TiggerTigger1
CAediting_636254chr8_43079872_+DNATcMar-TiggerTigger1
CAediting_636255chr8_43079917_+DNATcMar-TiggerTigger1
CAediting_636256chr8_43080160_+DNATcMar-TiggerTigger1
CAediting_636257chr8_43081596_+SINEAluAluJr
CAediting_636258chr8_43081615_+SINEAluAluJr
CAediting_636259chr8_43081620_+SINEAluAluJr
CAediting_636260chr8_43081624_+SINEAluAluJr
CAediting_636261chr8_43081633_+SINEAluAluJr
CAediting_636262chr8_43081650_+SINEAluAluJr
CAediting_636263chr8_43081658_+SINEAluAluJr
CAediting_636264chr8_43081663_+SINEAluAluJr
CAediting_636265chr8_43081676_+SINEAluAluJr
CAediting_636266chr8_43081681_+SINEAluAluJr
CAediting_636267chr8_43081692_+SINEAluAluJr
CAediting_636268chr8_43081699_+SINEAluAluJr
CAediting_636269chr8_43081702_+SINEAluAluJr
CAediting_636270chr8_43081704_+SINEAluAluJr
CAediting_636271chr8_43081708_+SINEAluAluJr
CAediting_636272chr8_43081754_+SINEAluAluJr
CAediting_636273chr8_43081773_+SINEAluAluJr
CAediting_636274chr8_43081775_+SINEAluAluJr
CAediting_636275chr8_43081802_+SINEAluAluJr
CAediting_636276chr8_43081826_+SINEAluAluJr
CAediting_636277chr8_43081838_+SINEAluAluJr
CAediting_636278chr8_43081840_+SINEAluAluJr
CAediting_636279chr8_43081860_+SINEAluAluJr
CAediting_636281chr8_43082792_+SINEAluAluSx4
CAediting_636282chr8_43082793_+SINEAluAluSx4
CAediting_636283chr8_43082801_+SINEAluAluSx4
CAediting_636284chr8_43082819_+SINEAluAluSx4
CAediting_636285chr8_43082845_+SINEAluAluSx4
CAediting_636286chr8_43082862_+SINEAluAluSx4
CAediting_636287chr8_43082869_+SINEAluAluSx4
CAediting_636288chr8_43082870_+SINEAluAluSx4
CAediting_636289chr8_43082881_+SINEAluAluSx4
CAediting_636290chr8_43082886_+SINEAluAluSx4
CAediting_636291chr8_43082899_+SINEAluAluSx4
CAediting_636292chr8_43082925_+SINEAluAluSx4
CAediting_636293chr8_43082931_+SINEAluAluSx4
CAediting_636294chr8_43082952_+SINEAluAluSx4
CAediting_636295chr8_43082961_+SINEAluAluSx4
CAediting_636296chr8_43082966_+SINEAluAluSx4
CAediting_636297chr8_43082967_+SINEAluAluSx4
CAediting_636298chr8_43083006_+SINEAluAluSx4
CAediting_636299chr8_43083016_+SINEAluAluSx4
CAediting_636300chr8_43083033_+SINEAluAluSx4
CAediting_636301chr8_43083034_+SINEAluAluSx4
CAediting_636302chr8_43083804_+SINEAluAluSz6
CAediting_636303chr8_43083818_+SINEAluAluSz6
CAediting_636304chr8_43083858_+SINEAluAluSz6
CAediting_636305chr8_43083953_+SINEAluAluSz6
CAediting_636306chr8_43083975_+SINEAluAluSz6
CAediting_636307chr8_43083976_+SINEAluAluSz6
CAediting_636308chr8_43084017_+SINEAluAluSz6
CAediting_636309chr8_43084021_+SINEAluAluSz6
CAediting_636310chr8_43084022_+SINEAluAluSz6
CAediting_636311chr8_43084313_+SINEAluAluJr
CAediting_636312chr8_43084337_+SINEAluAluJr
CAediting_636313chr8_43084402_+SINEAluAluJr
CAediting_636314chr8_43084405_+SINEAluAluJr
CAediting_636315chr8_43084456_+SINEAluAluJr
CAediting_636316chr8_43084457_+SINEAluAluJr
CAediting_636317chr8_43084498_+SINEAluAluJr

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RNA A-to-I editing events in the alternative splicing sites for FNTA

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_636210chr8_43070089_+43070081:430701033SS0+12iCCGTCTCTACTAAAAATACAGAA-16.32CCGTCTCTGCTAAAAATACAGAA-15.77
IRCAediting_636211chr8_43070093_+43070081:430701033SS0+8iCCGTCTCTACTAAAAATACAGAA-16.32CCGTCTCTACTAGAAATACAGAA-23.33
IRCAediting_636212chr8_43070094_+43070081:430701033SS0+7iCCGTCTCTACTAAAAATACAGAA-16.32CCGTCTCTACTAAGAATACAGAA-22.74
IRCAediting_636213chr8_43070095_+43070081:430701033SS0+6iCCGTCTCTACTAAAAATACAGAA-16.32CCGTCTCTACTAAAGATACAGAA-21.05
IRCAediting_636214chr8_43070096_+43070081:430701033SS0+5iCCGTCTCTACTAAAAATACAGAA-16.32CCGTCTCTACTAAAAGTACAGAA-22.52
IRCAediting_636215chr8_43070100_+43070081:430701033SS0+1iCCGTCTCTACTAAAAATACAGAA-16.32CCGTCTCTACTAAAAATACGGAA-7.57
IRCAediting_636216chr8_43070103_+43070081:430701033SS3+0iCCGTCTCTACTAAAAATACAGAA-16.32CCGTCTCTACTAAAAATACAGAG-17.47

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000168522.11.FNTA.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000168522.11.FNTA.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FNTA

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for FNTA

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for FNTA

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_636251chr8_43077712_+ENSG00000168522.11ENST00000526755hsa-miR-6870-3p43077707430777137mer-m84307769543077714145.00-18.20
CAediting_636252chr8_43077725_+ENSG00000168522.11ENST00000526755hsa-miR-5003-5p43077718430777247mer-m84307769943077725147.00-16.71
CAediting_636255chr8_43079917_+ENSG00000168522.11ENST00000526755hsa-miR-1236-3p43079910430799167mer-m84307989643079917154.00-22.04
CAediting_636255chr8_43079917_+ENSG00000168522.11ENST00000526755hsa-miR-642a-5p43079913430799208mer-1a4307989843079920147.00-23.03
CAediting_636255chr8_43079917_+ENSG00000168522.11ENST00000526755hsa-miR-642b-5p43079915430799217mer-m84307989843079922154.00-24.43
CAediting_636255chr8_43079917_+ENSG00000168522.11ENST00000526755hsa-miR-877-3p43079911430799177mer-m84307989843079918143.00-15.38
CAediting_636254chr8_43079872_+ENSG00000168522.11ENST00000526755hsa-miR-4743-5p43079868430798747mer-m84307985343079875142.00-16.18
CAediting_636254chr8_43079872_+ENSG00000168522.11ENST00000526755hsa-miR-6781-5p43079869430798757mer-m84307985743079876157.00-22.27

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_636255chr8_43079917_+ENSG00000168522.11ENST00000526755hsa-miR-124843079912430799198mer-1a4307989343079919151-12.7
CAediting_636253chr8_43078668_+ENSG00000168522.11ENST00000526755hsa-miR-16-2-3p43078664430786718mer-1a4307864943078671155-11.09
CAediting_636253chr8_43078668_+ENSG00000168522.11ENST00000526755hsa-miR-195-3p43078664430786718mer-1a4307865043078671154-15.57
CAediting_636254chr8_43079872_+ENSG00000168522.11ENST00000526755hsa-miR-365243079868430798747mer-m84307985843079875141-13.69
CAediting_636254chr8_43079872_+ENSG00000168522.11ENST00000526755hsa-miR-443043079868430798747mer-m84307985843079875154-19.85
CAediting_636254chr8_43079872_+ENSG00000168522.11ENST00000526755hsa-miR-449243079869430798757mer-m84307986043079876141-17.91
CAediting_636254chr8_43079872_+ENSG00000168522.11ENST00000526755hsa-miR-449843079869430798757mer-m84307985743079876145-18.84
CAediting_636254chr8_43079872_+ENSG00000168522.11ENST00000526755hsa-miR-612843079866430798727mer-m84307985543079873147-12.84
CAediting_636255chr8_43079917_+ENSG00000168522.11ENST00000526755hsa-miR-6868-3p43079913430799208mer-1a4307990143079920150-18.07
CAediting_636255chr8_43079917_+ENSG00000168522.11ENST00000526755hsa-miR-6875-3p43079910430799167mer-m84307989643079917145-11.89
CAediting_636254chr8_43079872_+ENSG00000168522.11ENST00000526755hsa-miR-76243079869430798757mer-m84307985543079876146-22.15

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000168522.11ENST00000526755hsa-miR-200b-3p43078898430789058mer-1a4307888443078905146-14.87
CAediting_1351755chr19_40282625_-ENSG00000168522.11ENST00000526755hsa-miR-64143078442430784476mer4307842843078448143-20.2
CAediting_396018chr5_1062918_-ENSG00000168522.11ENST00000526755hsa-miR-463543078241430782477mer-m84307822743078248146-16.09
CAediting_524911chr7_5495852_-ENSG00000168522.11ENST00000526755hsa-miR-589-3p43078208430782147mer-m84307819143078215143-14.95
CAediting_1229414chr17_67471546_+ENSG00000168522.11ENST00000526755hsa-miR-548aa43084724430847307mer-m84308470943084731154-17.64
CAediting_1229414chr17_67471546_+ENSG00000168522.11ENST00000533383hsa-miR-548aa43084724430847307mer-m84308470943084731154-17.64
CAediting_1229414chr17_67471546_+ENSG00000168522.11ENST00000533998hsa-miR-548aa43084724430847307mer-m84308470943084731154-17.64

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1160181chr17_7017644_-ENSG00000168522.11ENST00000526755hsa-miR-195-3p43078664430786718mer-1a4307865043078671154-15.57
CAediting_1160181chr17_7017644_-ENSG00000168522.11ENST00000526755hsa-miR-195-3p43080126430801327mer-m84308011243080133145-6.96
CAediting_1160181chr17_7017644_-ENSG00000168522.11ENST00000526755hsa-miR-195-3p43077560430775667mer-m84307754643077567140-5.69
CAediting_393chr1_1167164_+ENSG00000168522.11ENST00000526755hsa-miR-200b-3p43078470430784767mer-m84307845643078477151-9.32
CAediting_1306324chr19_13836464_-ENSG00000168522.11ENST00000526755hsa-miR-27a-3p43080206430802127mer-m84308019543080213146-14.53
CAediting_604450chr7_133034877_-ENSG00000168522.11ENST00000526755hsa-miR-365443077359430773657mer-m84307734843077366140-13.09
CAediting_1229413chr17_67471544_+ENSG00000168522.11ENST00000526755hsa-miR-548aa43078303430783097mer-m84307828643078310154-11.63
CAediting_1229415chr17_67471547_+ENSG00000168522.11ENST00000526755hsa-miR-548aa43078303430783097mer-m84307828643078310154-11.63
CAediting_1351755chr19_40282625_-ENSG00000168522.11ENST00000526755hsa-miR-64143078400430784067mer-m84307838643078407149-9.64
CAediting_1160181chr17_7017644_-ENSG00000168522.11ENST00000526755hsa-miR-195-3p43085202430852087mer-m84308519043085209142-10.99

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FNTA

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000524546.4processed_transcriptSoverviewSoverview
ENST00000526755.4nonsense_mediated_decaySoverviewSoverview
ENST00000525099.1retained_intronSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_636216ENST00000524546.4chr8_43070103_+-261.50-261.10-282.80
CAediting_636217ENST00000524546.4chr8_43070107_+-264.60-261.10-282.80
CAediting_636218ENST00000524546.4chr8_43070131_+-263.40-261.10-282.80
CAediting_636219ENST00000524546.4chr8_43070132_+-261.10-261.10-282.80
CAediting_636220ENST00000524546.4chr8_43070137_+-261.70-261.10-282.80
CAediting_636221ENST00000524546.4chr8_43070175_+-260.80-261.10-282.80
CAediting_636222ENST00000524546.4chr8_43070189_+-261.10-261.10-282.80
CAediting_636223ENST00000524546.4chr8_43070190_+-265.20-261.10-282.80
CAediting_636224ENST00000524546.4chr8_43070199_+-263.50-261.10-282.80
CAediting_636225ENST00000524546.4chr8_43070203_+-263.20-261.10-282.80
CAediting_636226ENST00000524546.4chr8_43070214_+-260.40-261.10-282.80
CAediting_636227ENST00000524546.4chr8_43070220_+-262.90-261.10-282.80
CAediting_636228ENST00000524546.4chr8_43070223_+-261.10-261.10-282.80
CAediting_636229ENST00000524546.4chr8_43070228_+-260.80-261.10-282.80
CAediting_636230ENST00000524546.4chr8_43070229_+-264.80-261.10-282.80
CAediting_636231ENST00000524546.4chr8_43070253_+-262.30-261.10-282.80
CAediting_636232ENST00000524546.4chr8_43070258_+-268.00-261.10-282.80
CAediting_636233ENST00000524546.4chr8_43070260_+-260.50-261.10-282.80
CAediting_636234ENST00000524546.4chr8_43070265_+-263.30-261.10-282.80
CAediting_636251ENST00000526755.4chr8_43077712_+-1323.90-1323.50-1326.40
CAediting_636252ENST00000526755.4chr8_43077725_+-1323.30-1323.50-1326.40
CAediting_636253ENST00000526755.4chr8_43078668_+-1325.20-1323.50-1326.40
CAediting_636254ENST00000526755.4chr8_43079872_+-1323.60-1323.50-1326.40
CAediting_636255ENST00000526755.4chr8_43079917_+-1323.50-1323.50-1326.40
CAediting_636256ENST00000526755.4chr8_43080160_+-1323.90-1323.50-1326.40
CAediting_636251ENST00000525099.1chr8_43077712_+-2129.90-2128.90-2198.20
CAediting_636252ENST00000525099.1chr8_43077725_+-2132.10-2128.90-2198.20
CAediting_636253ENST00000525099.1chr8_43078668_+-2130.60-2128.90-2198.20
CAediting_636254ENST00000525099.1chr8_43079872_+-2128.40-2128.90-2198.20
CAediting_636255ENST00000525099.1chr8_43079917_+-2133.30-2128.90-2198.20
CAediting_636256ENST00000525099.1chr8_43080160_+-2129.40-2128.90-2198.20
CAediting_636257ENST00000525099.1chr8_43081596_+-2132.50-2128.90-2198.20
CAediting_636258ENST00000525099.1chr8_43081615_+-2128.00-2128.90-2198.20
CAediting_636259ENST00000525099.1chr8_43081620_+-2128.20-2128.90-2198.20
CAediting_636260ENST00000525099.1chr8_43081624_+-2136.10-2128.90-2198.20
CAediting_636261ENST00000525099.1chr8_43081633_+-2127.60-2128.90-2198.20
CAediting_636262ENST00000525099.1chr8_43081650_+-2133.30-2128.90-2198.20
CAediting_636263ENST00000525099.1chr8_43081658_+-2135.50-2128.90-2198.20
CAediting_636264ENST00000525099.1chr8_43081663_+-2129.30-2128.90-2198.20
CAediting_636265ENST00000525099.1chr8_43081676_+-2132.80-2128.90-2198.20
CAediting_636266ENST00000525099.1chr8_43081681_+-2128.20-2128.90-2198.20
CAediting_636267ENST00000525099.1chr8_43081692_+-2128.60-2128.90-2198.20
CAediting_636268ENST00000525099.1chr8_43081699_+-2128.30-2128.90-2198.20
CAediting_636269ENST00000525099.1chr8_43081702_+-2128.90-2128.90-2198.20
CAediting_636270ENST00000525099.1chr8_43081704_+-2128.20-2128.90-2198.20
CAediting_636271ENST00000525099.1chr8_43081708_+-2134.30-2128.90-2198.20
CAediting_636272ENST00000525099.1chr8_43081754_+-2135.50-2128.90-2198.20
CAediting_636273ENST00000525099.1chr8_43081773_+-2128.20-2128.90-2198.20
CAediting_636274ENST00000525099.1chr8_43081775_+-2128.30-2128.90-2198.20
CAediting_636275ENST00000525099.1chr8_43081802_+-2132.70-2128.90-2198.20
CAediting_636276ENST00000525099.1chr8_43081826_+-2128.60-2128.90-2198.20
CAediting_636277ENST00000525099.1chr8_43081838_+-2128.60-2128.90-2198.20
CAediting_636278ENST00000525099.1chr8_43081840_+-2128.90-2128.90-2198.20
CAediting_636279ENST00000525099.1chr8_43081860_+-2134.50-2128.90-2198.20
CAediting_636280ENST00000525099.1chr8_43082756_+-2129.80-2128.90-2198.20
CAediting_636281ENST00000525099.1chr8_43082792_+-2129.00-2128.90-2198.20
CAediting_636282ENST00000525099.1chr8_43082793_+-2128.90-2128.90-2198.20
CAediting_636283ENST00000525099.1chr8_43082801_+-2128.50-2128.90-2198.20
CAediting_636284ENST00000525099.1chr8_43082819_+-2135.10-2128.90-2198.20
CAediting_636285ENST00000525099.1chr8_43082845_+-2128.60-2128.90-2198.20
CAediting_636286ENST00000525099.1chr8_43082862_+-2127.90-2128.90-2198.20
CAediting_636287ENST00000525099.1chr8_43082869_+-2135.30-2128.90-2198.20
CAediting_636288ENST00000525099.1chr8_43082870_+-2129.20-2128.90-2198.20
CAediting_636289ENST00000525099.1chr8_43082881_+-2128.90-2128.90-2198.20
CAediting_636290ENST00000525099.1chr8_43082886_+-2129.00-2128.90-2198.20
CAediting_636291ENST00000525099.1chr8_43082899_+-2128.60-2128.90-2198.20
CAediting_636292ENST00000525099.1chr8_43082925_+-2128.60-2128.90-2198.20
CAediting_636293ENST00000525099.1chr8_43082931_+-2128.20-2128.90-2198.20
CAediting_636294ENST00000525099.1chr8_43082952_+-2133.60-2128.90-2198.20
CAediting_636295ENST00000525099.1chr8_43082961_+-2127.30-2128.90-2198.20
CAediting_636296ENST00000525099.1chr8_43082966_+-2128.90-2128.90-2198.20
CAediting_636297ENST00000525099.1chr8_43082967_+-2135.60-2128.90-2198.20
CAediting_636298ENST00000525099.1chr8_43083006_+-2128.50-2128.90-2198.20
CAediting_636299ENST00000525099.1chr8_43083016_+-2128.20-2128.90-2198.20
CAediting_636300ENST00000525099.1chr8_43083033_+-2133.10-2128.90-2198.20
CAediting_636301ENST00000525099.1chr8_43083034_+-2128.30-2128.90-2198.20

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Relation with ADAR for FNTA

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_636265chr8_43081676_+0.03010813705528620.211768464165693....

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Relation with cancer stages for FNTA

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCApathologic_stageCAediting_636269chr8_43081702_+0.048210158746120.254027683857996
KIRCpathologic_stageCAediting_636265chr8_43081676_+0.04577313610938540.244909731098684

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Relation with survival for FNTA

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
STADCAediting_636269chr8_43081702_+0.0370086231940450.01883410.0219357

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RelatedDrugs for FNTA

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
FNTAP49354DB06448LonafarnibProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha SmallMoleculeDrugapproved|investigational

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RelatedDiseases for FNTA

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource