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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: IQCE (CAeditome ID:23288)

Gene summary for IQCE

check button Gene summary
Gene informationGene symbol

IQCE

Gene ID

23288

Gene nameIQ motif containing E
Synonyms1700028P05Rik|PAPA7
Cytomap

7p22.3

Type of geneprotein-coding
DescriptionIQ domain-containing protein E
Modification date20210524
UniProtAcc

Q6IPM2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for IQCE

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000106012.16
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_521357(2559921, +), CAediting_521358(2559950, +), CAediting_521359(2560039, +), CAediting_521360(2560045, +), CAediting_521361(2560053, +), CAediting_521362(2560085, +), CAediting_521363(2560702, +), CAediting_521364(2560733, +), CAediting_521365(2560810, +), CAediting_521366(2561013, +), CAediting_521367(2561027, +), CAediting_521368(2561032, +), CAediting_521369(2561037, +), CAediting_521370(2561051, +), CAediting_521371(2561075, +), CAediting_521372(2561087, +), CAediting_521373(2561094, +), CAediting_521374(2561097, +), CAediting_521375(2561099, +), CAediting_521376(2561115, +), CAediting_521377(2561119, +), CAediting_521378(2561219, +), CAediting_521379(2561550, +), CAediting_521380(2561635, +), CAediting_521381(2561652, +), CAediting_521382(2561664, +), CAediting_521383(2561683, +), CAediting_521384(2562957, +), CAediting_521385(2562974, +), CAediting_521386(2562987, +), CAediting_521387(2563051, +), CAediting_521388(2563052, +), CAediting_521389(2563055, +), CAediting_521390(2563161, +), CAediting_521391(2563187, +), CAediting_521392(2563276, +), CAediting_521393(2563747, +), CAediting_521394(2563783, +), CAediting_521395(2563954, +), CAediting_521396(2564006, +), CAediting_521397(2564007, +), CAediting_521398(2564026, +), CAediting_521399(2564059, +), CAediting_521400(2564065, +), CAediting_521401(2564085, +), CAediting_521402(2564091, +), CAediting_521403(2564097, +), CAediting_521404(2564101, +), CAediting_521405(2564132, +), CAediting_521406(2564133, +), CAediting_521407(2564161, +), CAediting_521408(2564162, +), CAediting_521409(2564167, +), CAediting_521410(2564317, +), CAediting_521411(2564333, +), CAediting_521412(2564339, +), CAediting_521413(2564375, +), CAediting_521414(2564385, +), CAediting_521415(2564477, +), CAediting_521416(2564483, +), CAediting_521417(2564487, +), CAediting_521418(2564491, +), CAediting_521419(2578875, +), CAediting_521420(2578884, +), CAediting_521421(2578938, +), CAediting_521422(2578952, +), CAediting_521423(2579870, +), CAediting_521424(2580408, +), CAediting_521425(2580424, +), CAediting_521426(2580469, +), CAediting_521427(2580973, +), CAediting_521428(2581305, +), CAediting_521429(2581306, +), CAediting_521430(2581323, +), CAediting_521431(2581348, +), CAediting_521432(2581579, +), CAediting_521433(2581586, +), CAediting_521434(2581591, +), CAediting_521435(2581659, +), CAediting_521436(2581919, +), CAediting_521437(2581923, +), CAediting_521438(2589293, +), CAediting_521439(2589312, +), CAediting_521440(2589335, +), CAediting_521441(2590645, +), CAediting_521442(2590659, +), CAediting_521443(2590667, +), CAediting_521444(2590680, +), CAediting_521445(2591058, +), CAediting_521446(2591088, +), CAediting_521447(2591091, +), CAediting_521448(2591093, +), CAediting_521449(2591094, +), CAediting_521450(2591116, +), CAediting_521451(2591132, +), CAediting_521452(2591155, +), CAediting_521453(2591165, +), CAediting_521454(2591182, +), CAediting_521455(2591695, +), CAediting_521456(2591715, +), CAediting_521457(2591830, +), CAediting_521458(2591857, +), CAediting_521459(2596056, +), CAediting_521460(2596122, +), CAediting_521461(2596125, +), CAediting_521462(2596155, +), CAediting_521463(2596169, +), CAediting_521464(2596274, +), CAediting_521465(2597685, +), CAediting_521466(2597711, +), CAediting_521467(2597721, +), CAediting_521468(2597766, +), CAediting_521469(2599398, +), CAediting_521470(2599401, +), CAediting_521471(2599476, +), CAediting_521472(2601667, +), CAediting_521473(2601689, +), CAediting_521474(2601711, +), CAediting_521475(2601715, +), CAediting_521476(2601724, +), CAediting_521477(2601810, +), CAediting_521478(2601824, +), CAediting_521479(2604171, +), CAediting_521480(2604190, +), CAediting_521481(2605463, +), CAediting_521482(2605513, +), CAediting_521483(2611979, +), CAediting_521484(2611980, +), CAediting_521485(2612141, +),

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RNA editing positional annotations for IQCE using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_521357chr7_2559921_+ncRNA_intronic
CAediting_521358chr7_2559950_+ncRNA_intronic
CAediting_521359chr7_2560039_+ncRNA_intronic
CAediting_521360chr7_2560045_+ncRNA_intronic
CAediting_521361chr7_2560053_+ncRNA_intronic
CAediting_521362chr7_2560085_+ncRNA_intronic
CAediting_521363chr7_2560702_+ncRNA_intronic
CAediting_521364chr7_2560733_+ncRNA_intronic
CAediting_521365chr7_2560810_+ncRNA_intronic
CAediting_521366chr7_2561013_+ncRNA_intronic
CAediting_521367chr7_2561027_+ncRNA_intronic
CAediting_521368chr7_2561032_+ncRNA_intronic
CAediting_521369chr7_2561037_+ncRNA_intronic
CAediting_521370chr7_2561051_+ncRNA_intronic
CAediting_521371chr7_2561075_+ncRNA_intronic
CAediting_521372chr7_2561087_+ncRNA_intronic
CAediting_521373chr7_2561094_+ncRNA_intronic
CAediting_521374chr7_2561097_+ncRNA_intronic
CAediting_521375chr7_2561099_+ncRNA_intronic
CAediting_521376chr7_2561115_+ncRNA_intronic
CAediting_521377chr7_2561119_+ncRNA_intronic
CAediting_521378chr7_2561219_+ncRNA_intronic
CAediting_521379chr7_2561550_+ncRNA_intronic
CAediting_521380chr7_2561635_+ncRNA_intronic
CAediting_521381chr7_2561652_+ncRNA_intronic
CAediting_521382chr7_2561664_+ncRNA_intronic
CAediting_521383chr7_2561683_+ncRNA_intronic
CAediting_521384chr7_2562957_+ncRNA_intronic
CAediting_521385chr7_2562974_+ncRNA_intronic
CAediting_521386chr7_2562987_+ncRNA_intronic
CAediting_521387chr7_2563051_+ncRNA_intronic
CAediting_521388chr7_2563052_+ncRNA_intronic
CAediting_521389chr7_2563055_+ncRNA_intronic
CAediting_521390chr7_2563161_+ncRNA_intronic
CAediting_521391chr7_2563187_+ncRNA_intronic
CAediting_521392chr7_2563276_+ncRNA_intronic
CAediting_521393chr7_2563747_+ncRNA_intronic
CAediting_521394chr7_2563783_+ncRNA_intronic
CAediting_521395chr7_2563954_+ncRNA_intronic
CAediting_521396chr7_2564006_+ncRNA_intronic
CAediting_521397chr7_2564007_+ncRNA_intronic
CAediting_521398chr7_2564026_+ncRNA_intronic
CAediting_521399chr7_2564059_+ncRNA_intronic
CAediting_521400chr7_2564065_+ncRNA_intronic
CAediting_521401chr7_2564085_+ncRNA_intronic
CAediting_521402chr7_2564091_+ncRNA_intronic
CAediting_521403chr7_2564097_+ncRNA_intronic
CAediting_521404chr7_2564101_+ncRNA_intronic
CAediting_521405chr7_2564132_+ncRNA_intronic
CAediting_521406chr7_2564133_+ncRNA_intronic
CAediting_521407chr7_2564161_+ncRNA_intronic
CAediting_521408chr7_2564162_+ncRNA_intronic
CAediting_521409chr7_2564167_+ncRNA_intronic
CAediting_521410chr7_2564317_+ncRNA_intronic
CAediting_521411chr7_2564333_+ncRNA_intronic
CAediting_521412chr7_2564339_+ncRNA_intronic
CAediting_521413chr7_2564375_+ncRNA_intronic
CAediting_521414chr7_2564385_+ncRNA_intronic
CAediting_521415chr7_2564477_+ncRNA_intronic
CAediting_521416chr7_2564483_+ncRNA_intronic
CAediting_521417chr7_2564487_+ncRNA_intronic
CAediting_521418chr7_2564491_+ncRNA_intronic
CAediting_521419chr7_2578875_+ncRNA_intronic
CAediting_521420chr7_2578884_+ncRNA_intronic
CAediting_521421chr7_2578938_+ncRNA_intronic
CAediting_521422chr7_2578952_+ncRNA_intronic
CAediting_521423chr7_2579870_+ncRNA_intronic
CAediting_521424chr7_2580408_+ncRNA_intronic
CAediting_521425chr7_2580424_+ncRNA_intronic
CAediting_521426chr7_2580469_+ncRNA_intronic
CAediting_521427chr7_2580973_+ncRNA_intronic
CAediting_521428chr7_2581305_+ncRNA_intronic
CAediting_521429chr7_2581306_+ncRNA_intronic
CAediting_521430chr7_2581323_+ncRNA_intronic
CAediting_521431chr7_2581348_+ncRNA_intronic
CAediting_521432chr7_2581579_+ncRNA_intronic
CAediting_521433chr7_2581586_+ncRNA_intronic
CAediting_521434chr7_2581591_+ncRNA_intronic
CAediting_521435chr7_2581659_+ncRNA_intronic
CAediting_521436chr7_2581919_+ncRNA_intronic
CAediting_521437chr7_2581923_+ncRNA_intronic
CAediting_521438chr7_2589293_+ncRNA_intronic
CAediting_521439chr7_2589312_+ncRNA_intronic
CAediting_521440chr7_2589335_+ncRNA_intronic
CAediting_521441chr7_2590645_+ncRNA_intronic
CAediting_521442chr7_2590659_+ncRNA_intronic
CAediting_521443chr7_2590667_+ncRNA_intronic
CAediting_521444chr7_2590680_+ncRNA_intronic
CAediting_521445chr7_2591058_+ncRNA_intronic
CAediting_521446chr7_2591088_+ncRNA_intronic
CAediting_521447chr7_2591091_+ncRNA_intronic
CAediting_521448chr7_2591093_+ncRNA_intronic
CAediting_521449chr7_2591094_+ncRNA_intronic
CAediting_521450chr7_2591116_+ncRNA_intronic
CAediting_521451chr7_2591132_+ncRNA_intronic
CAediting_521452chr7_2591155_+ncRNA_intronic
CAediting_521453chr7_2591165_+ncRNA_intronic
CAediting_521454chr7_2591182_+ncRNA_intronic
CAediting_521455chr7_2591695_+ncRNA_intronic
CAediting_521456chr7_2591715_+ncRNA_intronic
CAediting_521457chr7_2591830_+ncRNA_intronic
CAediting_521458chr7_2591857_+ncRNA_intronic
CAediting_521459chr7_2596056_+ncRNA_intronic
CAediting_521460chr7_2596122_+ncRNA_intronic
CAediting_521461chr7_2596125_+ncRNA_intronic
CAediting_521462chr7_2596155_+ncRNA_intronic
CAediting_521463chr7_2596169_+ncRNA_intronic
CAediting_521464chr7_2596274_+ncRNA_intronic
CAediting_521465chr7_2597685_+ncRNA_intronic
CAediting_521466chr7_2597711_+ncRNA_intronic
CAediting_521467chr7_2597721_+ncRNA_intronic
CAediting_521468chr7_2597766_+ncRNA_intronic
CAediting_521469chr7_2599398_+ncRNA_intronic
CAediting_521470chr7_2599401_+ncRNA_intronic
CAediting_521471chr7_2599476_+ncRNA_intronic
CAediting_521472chr7_2601667_+ncRNA_exonic
CAediting_521473chr7_2601689_+ncRNA_exonic
CAediting_521474chr7_2601711_+ncRNA_exonic
CAediting_521475chr7_2601715_+ncRNA_exonic
CAediting_521476chr7_2601724_+ncRNA_exonic
CAediting_521477chr7_2601810_+ncRNA_exonic
CAediting_521478chr7_2601824_+ncRNA_exonic
CAediting_521479chr7_2604171_+ncRNA_intronic
CAediting_521480chr7_2604190_+ncRNA_intronic
CAediting_521481chr7_2605463_+ncRNA_intronic
CAediting_521482chr7_2605513_+ncRNA_intronic
CAediting_521483chr7_2611979_+UTR3
CAediting_521484chr7_2611980_+UTR3
CAediting_521485chr7_2612141_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_521357chr7_2559921_+SINEAluAluJr
CAediting_521358chr7_2559950_+SINEAluAluJr
CAediting_521359chr7_2560039_+SINEAluAluJr
CAediting_521360chr7_2560045_+SINEAluAluJr
CAediting_521361chr7_2560053_+SINEAluAluJr
CAediting_521362chr7_2560085_+SINEAluAluJr
CAediting_521363chr7_2560702_+SINEAluAluY
CAediting_521364chr7_2560733_+SINEAluAluY
CAediting_521365chr7_2560810_+SINEAluAluY
CAediting_521366chr7_2561013_+SINEAluAluSx1
CAediting_521367chr7_2561027_+SINEAluAluSx1
CAediting_521368chr7_2561032_+SINEAluAluSx1
CAediting_521369chr7_2561037_+SINEAluAluSx1
CAediting_521370chr7_2561051_+SINEAluAluSx1
CAediting_521371chr7_2561075_+SINEAluAluSx1
CAediting_521372chr7_2561087_+SINEAluAluSx1
CAediting_521373chr7_2561094_+SINEAluAluSx1
CAediting_521374chr7_2561097_+SINEAluAluSx1
CAediting_521375chr7_2561099_+SINEAluAluSx1
CAediting_521376chr7_2561115_+SINEAluAluSx1
CAediting_521377chr7_2561119_+SINEAluAluSx1
CAediting_521378chr7_2561219_+SINEAluAluSx1
CAediting_521379chr7_2561550_+SINEAluAluYm1
CAediting_521380chr7_2561635_+SINEAluAluYm1
CAediting_521381chr7_2561652_+SINEAluAluYm1
CAediting_521382chr7_2561664_+SINEAluAluYm1
CAediting_521383chr7_2561683_+SINEAluAluYm1
CAediting_521384chr7_2562957_+SINEAluAluJo
CAediting_521385chr7_2562974_+SINEAluAluJo
CAediting_521386chr7_2562987_+SINEAluAluJo
CAediting_521387chr7_2563051_+SINEAluAluJo
CAediting_521388chr7_2563052_+SINEAluAluJo
CAediting_521389chr7_2563055_+SINEAluAluJo
CAediting_521390chr7_2563161_+SINEAluAluJo
CAediting_521391chr7_2563187_+SINEAluAluJo
CAediting_521392chr7_2563276_+SINEAluAluJb
CAediting_521393chr7_2563747_+SINEAluAluY
CAediting_521394chr7_2563783_+SINEAluAluY
CAediting_521395chr7_2563954_+SINEAluAluSx3
CAediting_521396chr7_2564006_+SINEAluAluSx3
CAediting_521397chr7_2564007_+SINEAluAluSx3
CAediting_521398chr7_2564026_+SINEAluAluSx3
CAediting_521399chr7_2564059_+SINEAluAluSx3
CAediting_521400chr7_2564065_+SINEAluAluSx3
CAediting_521401chr7_2564085_+SINEAluAluSx3
CAediting_521402chr7_2564091_+SINEAluAluSx3
CAediting_521403chr7_2564097_+SINEAluAluSx3
CAediting_521404chr7_2564101_+SINEAluAluSx3
CAediting_521405chr7_2564132_+SINEAluAluSx3
CAediting_521406chr7_2564133_+SINEAluAluSx3
CAediting_521407chr7_2564161_+SINEAluAluSx3
CAediting_521408chr7_2564162_+SINEAluAluSx3
CAediting_521409chr7_2564167_+SINEAluAluSx3
CAediting_521410chr7_2564317_+SINEAluAluSx
CAediting_521411chr7_2564333_+SINEAluAluSx
CAediting_521412chr7_2564339_+SINEAluAluSx
CAediting_521413chr7_2564375_+SINEAluAluSx
CAediting_521414chr7_2564385_+SINEAluAluSx
CAediting_521415chr7_2564477_+SINEAluAluSx
CAediting_521416chr7_2564483_+SINEAluAluSx
CAediting_521417chr7_2564487_+SINEAluAluSx
CAediting_521418chr7_2564491_+SINEAluAluSx
CAediting_521419chr7_2578875_+SINEAluAluSz
CAediting_521420chr7_2578884_+SINEAluAluSz
CAediting_521421chr7_2578938_+SINEAluAluSz
CAediting_521422chr7_2578952_+SINEAluAluSz
CAediting_521423chr7_2579870_+SINEAluAluJr
CAediting_521424chr7_2580408_+SINEAluAluSq
CAediting_521425chr7_2580424_+SINEAluAluSq
CAediting_521426chr7_2580469_+SINEAluAluSq
CAediting_521427chr7_2580973_+SINEAluAluY
CAediting_521428chr7_2581305_+SINEAluAluSx1
CAediting_521429chr7_2581306_+SINEAluAluSx1
CAediting_521430chr7_2581323_+SINEAluAluSx1
CAediting_521431chr7_2581348_+SINEAluAluSx1
CAediting_521432chr7_2581579_+SINEAluAluJo
CAediting_521433chr7_2581586_+SINEAluAluJo
CAediting_521434chr7_2581591_+SINEAluAluJo
CAediting_521435chr7_2581659_+SINEAluAluJo
CAediting_521436chr7_2581919_+SINEAluAluY
CAediting_521437chr7_2581923_+SINEAluAluY
CAediting_521438chr7_2589293_+SINEAluAluJo
CAediting_521439chr7_2589312_+SINEAluAluJo
CAediting_521440chr7_2589335_+SINEAluAluJo
CAediting_521441chr7_2590645_+SINEAluAluJr
CAediting_521442chr7_2590659_+SINEAluAluJr
CAediting_521443chr7_2590667_+SINEAluAluJr
CAediting_521444chr7_2590680_+SINEAluAluJr
CAediting_521445chr7_2591058_+SINEAluAluJb
CAediting_521446chr7_2591088_+SINEAluAluJb
CAediting_521447chr7_2591091_+SINEAluAluJb
CAediting_521448chr7_2591093_+SINEAluAluJb
CAediting_521449chr7_2591094_+SINEAluAluJb
CAediting_521450chr7_2591116_+SINEAluAluJb
CAediting_521451chr7_2591132_+SINEAluAluJb
CAediting_521452chr7_2591155_+SINEAluAluJb
CAediting_521453chr7_2591165_+SINEAluAluJb
CAediting_521454chr7_2591182_+SINEAluAluJb
CAediting_521455chr7_2591695_+SINEAluAluSz
CAediting_521456chr7_2591715_+SINEAluAluSz
CAediting_521457chr7_2591830_+SINEAluAluSz
CAediting_521458chr7_2591857_+SINEAluAluSz
CAediting_521462chr7_2596155_+SINEAluAluJb
CAediting_521463chr7_2596169_+SINEAluAluJb
CAediting_521464chr7_2596274_+SINEAluAluJb
CAediting_521465chr7_2597685_+SINEAluAluJo
CAediting_521466chr7_2597711_+SINEAluAluJo
CAediting_521467chr7_2597721_+SINEAluAluJo
CAediting_521468chr7_2597766_+SINEAluAluJo
CAediting_521469chr7_2599398_+SINEAluAluSx1
CAediting_521470chr7_2599401_+SINEAluAluSx1
CAediting_521471chr7_2599476_+SINEAluAluSx1
CAediting_521472chr7_2601667_+SINEAluAluSx
CAediting_521473chr7_2601689_+SINEAluAluSx
CAediting_521474chr7_2601711_+SINEAluAluSx
CAediting_521475chr7_2601715_+SINEAluAluSx
CAediting_521476chr7_2601724_+SINEAluAluSx
CAediting_521477chr7_2601810_+SINEAluAluSx
CAediting_521478chr7_2601824_+SINEAluAluSx
CAediting_521479chr7_2604171_+SINEAluAluSz6
CAediting_521480chr7_2604190_+SINEAluAluSz6
CAediting_521481chr7_2605463_+SINEAluAluY
CAediting_521482chr7_2605513_+SINEAluAluY

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RNA A-to-I editing events in the alternative splicing sites for IQCE

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_521465chr7_2597685_+2597666:25976883SS0+1iATTTTTCTTTTTTCTTTTTAGAG-5.68ATTTTTCTTTTTTCTTTTTGGAG3.07
MEX_1CAediting_521465chr7_2597685_+2597666:25976883SS0+1iATTTTTCTTTTTTCTTTTTAGAG-5.68ATTTTTCTTTTTTCTTTTTGGAG3.07
IRCAediting_521474chr7_2601711_+2601711:26017333SS0+20iAGCTAATTTTTGTATTTTTAGGA-8.91GGCTAATTTTTGTATTTTTAGGA-8.55
IRCAediting_521475chr7_2601715_+2601711:26017333SS0+16iAGCTAATTTTTGTATTTTTAGGA-8.91AGCTGATTTTTGTATTTTTAGGA-8.31
IRCAediting_521476chr7_2601724_+2601711:26017333SS0+7iAGCTAATTTTTGTATTTTTAGGA-8.91AGCTAATTTTTGTGTTTTTAGGA-8.11

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000106012.16.IQCE.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000106012.16.IQCE.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for IQCE

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for IQCE

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for IQCE

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_521483chr7_2611979_+ENSG00000106012.16ENST00000623361hsa-miR-3921261197426119807mer-m826119592611981141.00-12.95
CAediting_521483chr7_2611979_+ENSG00000106012.16ENST00000623361hsa-miR-4303261197326119797mer-m826119642611980150.00-18.66
CAediting_521483chr7_2611979_+ENSG00000106012.16ENST00000623361hsa-miR-4653-5p261197426119807mer-m826119612611981148.00-17.45
CAediting_521483chr7_2611979_+ENSG00000106012.16ENST00000623361hsa-miR-6796-3p261197726119837mer-m826119642611984141.00-14.33
CAediting_521485chr7_2612141_+ENSG00000106012.16ENST00000623361hsa-miR-1972261213426121407mer-m826121202612141140.00-21.67
CAediting_521485chr7_2612141_+ENSG00000106012.16ENST00000623361hsa-miR-1972261213426121407mer-m826121202612141140.00-21.67

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_521485chr7_2612141_+ENSG00000106012.16ENST00000623361hsa-miR-1301-5p261213826121447mer-m826121262612145153-18.62
CAediting_521485chr7_2612141_+ENSG00000106012.16ENST00000623361hsa-miR-3059-3p261213726121437mer-m826121232612144140-13.44
CAediting_521485chr7_2612141_+ENSG00000106012.16ENST00000623361hsa-miR-5704261213426121407mer-m826121182612141147-21.36
CAediting_521485chr7_2612141_+ENSG00000106012.16ENST00000623361hsa-miR-6502-5p261213826121447mer-m826121242612145146-16.92

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000106012.16ENST00000623361hsa-miR-605-3p261079126107977mer-m826107772610798142-16.98
CAediting_980496chr14_31014685_-ENSG00000106012.16ENST00000623361hsa-miR-624-3p261446526144717mer-m826144512614472163-21.05
CAediting_748296chr10_51299626_+ENSG00000106012.16ENST00000325997hsa-miR-605-3p258625825862647mer-m825862442586265151-17.6
CAediting_846604chr11_93733708_-ENSG00000106012.16ENST00000325997hsa-miR-1304-3p259852925985357mer-m825985152598536148-19.77
CAediting_1306324chr19_13836464_-ENSG00000106012.16ENST00000325997hsa-miR-27a-3p259850125985077mer-m825984882598508152-18.88
CAediting_393chr1_1167164_+ENSG00000106012.16ENST00000476665hsa-miR-200b-3p260751026075167mer-m826074972607517155-17.36
CAediting_393chr1_1167164_+ENSG00000106012.16ENST00000611775hsa-miR-200b-3p260751026075167mer-m826074972607517155-17.36
CAediting_1054808chr15_66496985_-ENSG00000106012.16ENST00000623361hsa-miR-4512261295426129618mer-1a26129412612961145-18.32
CAediting_1054808chr15_66496985_-ENSG00000106012.16ENST00000623361hsa-miR-4512261349826135058mer-1a26134822613505155-29.16
CAediting_1229414chr17_67471546_+ENSG00000106012.16ENST00000623361hsa-miR-548aa261458226145887mer-m826145622614589143-18.72
CAediting_1306323chr19_13836462_-ENSG00000106012.16ENST00000623361hsa-miR-27a-3p261050526105117mer-m826104952610512146-17.6
CAediting_1368054chr19_46709310_-ENSG00000106012.16ENST00000623361hsa-miR-320e261197026119778mer-1a26119622611977141-16.29
CAediting_86358chr1_109598906_+ENSG00000106012.16ENST00000623361hsa-miR-197-5p261191826119236mer26119142611938142-31.05
CAediting_77128chr1_85133844_+ENSG00000106012.16ENST00000623361hsa-miR-4423-3p261121926112257mer-m826112062611226140-14.18
CAediting_580943chr7_100356700_+ENSG00000106012.16ENST00000623361hsa-miR-6840-3p261288326128897mer-m826128682612890151-18.67
CAediting_604450chr7_133034877_-ENSG00000106012.16ENST00000623361hsa-miR-3654261309526131017mer-m826130842613102155-18.31
CAediting_573001chr7_92204086_-ENSG00000106012.16ENST00000623361hsa-miR-1285-5p261202426120318mer-1a26120112612031159-20.86
CAediting_573001chr7_92204086_-ENSG00000106012.16ENST00000623361hsa-miR-1285-5p261064026106467mer-m826106292610647143-18.09
CAediting_442554chr5_154685830_+ENSG00000106012.16ENST00000325997hsa-miR-1303258635625863627mer-m825863422586363147-18.07
CAediting_1368054chr19_46709310_-ENSG00000106012.16ENST00000325997hsa-miR-320e258998225899887mer-m825899712589989149-23.2
CAediting_524911chr7_5495852_-ENSG00000106012.16ENST00000325997hsa-miR-589-3p259856325985708mer-1a25985472598570140-18.96
CAediting_1524209chrX_134546392_-ENSG00000106012.16ENST00000623361hsa-miR-503-5p261019526102017mer-m826101802610202145-20.91
CAediting_468389chr6_31355314_-ENSG00000106012.16ENST00000325997hsa-miR-6891-5p260719426072007mer-m826071832607201142-17.14
CAediting_1524209chrX_134546392_-ENSG00000106012.16ENST00000325997hsa-miR-503-5p261019526102017mer-m826101802610202145-20.91
CAediting_1524209chrX_134546392_-ENSG00000106012.16ENST00000404984hsa-miR-503-5p261019526102017mer-m826101802610202145-20.91

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000106012.16ENST00000623361hsa-miR-1285-5p261124026112467mer-m826112272611247140-12.58
CAediting_846604chr11_93733708_-ENSG00000106012.16ENST00000623361hsa-miR-1304-3p261069026106967mer-m826106782610697148-12.96
CAediting_1306323chr19_13836462_-ENSG00000106012.16ENST00000623361hsa-miR-27a-3p261374826137547mer-m826137352613755140-14.04
CAediting_1368054chr19_46709310_-ENSG00000106012.16ENST00000623361hsa-miR-320e261309726131037mer-m826130872613104148-16.33
CAediting_604450chr7_133034877_-ENSG00000106012.16ENST00000623361hsa-miR-3654261121426112207mer-m826112052611221149-15.76
CAediting_604450chr7_133034877_-ENSG00000106012.16ENST00000623361hsa-miR-3654261232626123327mer-m826123172612333149-19.08
CAediting_77128chr1_85133844_+ENSG00000106012.16ENST00000623361hsa-miR-4423-3p261444526144517mer-m826144322614452140-14.4
CAediting_1054808chr15_66496985_-ENSG00000106012.16ENST00000623361hsa-miR-4512261189026118967mer-m826118762611897140-15.49
CAediting_396018chr5_1062918_-ENSG00000106012.16ENST00000623361hsa-miR-4635261304626130538mer-1a26130322613053147-14.08
CAediting_396018chr5_1062918_-ENSG00000106012.16ENST00000623361hsa-miR-4635261424526142528mer-1a26142322614252140-11
CAediting_1524209chrX_134546392_-ENSG00000106012.16ENST00000623361hsa-miR-503-5p261285226128576mer26128362612858141-29.03
CAediting_524911chr7_5495852_-ENSG00000106012.16ENST00000623361hsa-miR-589-3p261237426123807mer-m826123532612381152-26.07
CAediting_1351755chr19_40282625_-ENSG00000106012.16ENST00000623361hsa-miR-641261230526123106mer26122882612311145-15.43
CAediting_580943chr7_100356700_+ENSG00000106012.16ENST00000623361hsa-miR-6840-3p261119426112007mer-m826111792611201155-24.14
CAediting_468389chr6_31355314_-ENSG00000106012.16ENST00000623361hsa-miR-6891-5p261243926124457mer-m826124282612446140-14.1
CAediting_468389chr6_31355314_-ENSG00000106012.16ENST00000623361hsa-miR-6891-5p261429826143047mer-m826142872614305142-15.85

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for IQCE

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000402050.5protein_codingSoverviewSoverview
ENST00000470731.4retained_intronSoverviewSoverview
ENST00000623361.2protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_521483ENST00000402050.5chr7_2611979_+-2833.40-2832.80-2843.20
CAediting_521484ENST00000402050.5chr7_2611980_+-2833.10-2832.80-2843.20
CAediting_521485ENST00000402050.5chr7_2612141_+-2838.30-2832.80-2843.20
CAediting_521472ENST00000470731.4chr7_2601667_+-857.00-852.60-855.60
CAediting_521473ENST00000470731.4chr7_2601689_+-852.20-852.60-855.60
CAediting_521474ENST00000470731.4chr7_2601711_+-851.90-852.60-855.60
CAediting_521475ENST00000470731.4chr7_2601715_+-852.70-852.60-855.60
CAediting_521476ENST00000470731.4chr7_2601724_+-849.70-852.60-855.60
CAediting_521477ENST00000470731.4chr7_2601810_+-853.00-852.60-855.60
CAediting_521478ENST00000470731.4chr7_2601824_+-852.60-852.60-855.60
CAediting_521483ENST00000623361.2chr7_2611979_+-2817.40-2816.80-2827.20
CAediting_521484ENST00000623361.2chr7_2611980_+-2817.10-2816.80-2827.20
CAediting_521485ENST00000623361.2chr7_2612141_+-2822.30-2816.80-2827.20

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Relation with ADAR for IQCE

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for IQCE

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for IQCE

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for IQCE

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for IQCE

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
IQCEC3887487Postaxial polydactyly type A2ORPHANET
IQCEC4539976POLYDACTYLY, POSTAXIAL, TYPE A71GENOMICS_ENGLAND