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Editing gene: CAMTA1 (CAeditome ID:23261)

Gene summary for CAMTA1

Gene summary

Gene information	Gene symbol	CAMTA1
	Gene ID	23261
	Gene name	calmodulin binding transcription activator 1
	Synonyms	CANPMR
	Cytomap	1p36.31-p36.23
	Type of gene	protein-coding
	Description	calmodulin-binding transcription activator 1
	Modification date	20210531
	UniProtAcc	Q9Y6Y1
	Context	- 33316386(CAMTA1, a novel antitumor gene, regulates proliferation and the cell cycle in glioma by inhibiting AKT phosphorylation)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CAMTA1	GO:0005730	Calmodulin-binding transcription activator 1	0000052
CAMTA1	GO:0005829	Calmodulin-binding transcription activator 1	0000052

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RNA A-to-I events for CAMTA1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000171735.17

RNA A-to-I editing events in Cancer.

CAediting_5899(6800150, +), CAediting_5900(6800151, +), CAediting_5901(6818879, +), CAediting_5902(6829163, +), CAediting_5903(6830913, +), CAediting_5904(6838780, +), CAediting_5905(6838836, +), CAediting_5906(6838859, +), CAediting_5907(6838890, +), CAediting_5908(6838896, +), CAediting_5909(6838931, +), CAediting_5910(6839031, +), CAediting_5911(6839127, +), CAediting_5912(6839128, +), CAediting_5913(6839261, +), CAediting_5914(6839262, +), CAediting_5915(6839267, +), CAediting_5916(6839284, +), CAediting_5917(6839302, +), CAediting_5918(6839303, +), CAediting_5919(6842803, +), CAediting_5920(6842804, +), CAediting_5921(6842825, +), CAediting_5922(6843597, +), CAediting_5923(6843609, +), CAediting_5924(6843616, +), CAediting_5925(6843621, +), CAediting_5926(6843660, +), CAediting_5927(6843689, +), CAediting_5928(6843700, +), CAediting_5929(6843723, +), CAediting_5930(6843732, +), CAediting_5931(6843754, +), CAediting_5932(6844399, +), CAediting_5933(6844414, +), CAediting_5934(6844418, +), CAediting_5935(6844462, +), CAediting_5936(6844470, +), CAediting_5937(6844473, +), CAediting_5938(6844533, +), CAediting_5939(6844535, +), CAediting_5940(6844536, +), CAediting_5941(6844539, +), CAediting_5942(6844549, +), CAediting_5943(6844565, +), CAediting_5944(6844571, +), CAediting_5945(6844575, +), CAediting_5946(6844582, +), CAediting_5947(6844598, +), CAediting_5948(6844631, +), CAediting_5949(6844636, +), CAediting_5950(6844638, +), CAediting_5951(6844656, +), CAediting_5952(6847570, +), CAediting_5953(6847657, +), CAediting_5954(6848067, +), CAediting_5955(6848232, +), CAediting_5956(6848248, +), CAediting_5957(6848259, +), CAediting_5958(6848261, +), CAediting_5959(6848283, +), CAediting_5960(6848288, +), CAediting_5961(6848337, +), CAediting_5962(6848342, +), CAediting_5963(6848384, +), CAediting_5964(6848410, +), CAediting_5965(6848411, +), CAediting_5966(6848431, +), CAediting_5967(6849779, +), CAediting_5968(6849785, +), CAediting_5969(6849809, +), CAediting_5970(6849833, +), CAediting_5971(6849849, +), CAediting_5972(6849856, +), CAediting_5973(6849859, +), CAediting_5974(6849870, +), CAediting_5975(6849884, +), CAediting_5976(6849885, +), CAediting_5977(6849888, +), CAediting_5978(6849892, +), CAediting_5979(6849894, +), CAediting_5980(6849914, +), CAediting_5981(6849915, +), CAediting_5982(6849920, +), CAediting_5983(6849924, +), CAediting_5984(6849931, +), CAediting_5985(6849946, +), CAediting_5986(6849947, +), CAediting_5987(6849950, +), CAediting_5988(6849955, +), CAediting_5989(6849956, +), CAediting_5990(6849963, +), CAediting_5991(6849976, +), CAediting_5992(6849980, +), CAediting_5993(6849990, +), CAediting_5994(6850017, +), CAediting_5995(6851642, +), CAediting_5996(6851688, +), CAediting_5997(6851700, +), CAediting_5998(6851863, +), CAediting_5999(6851893, +), CAediting_6000(6851894, +), CAediting_6001(6851934, +), CAediting_6002(6851935, +), CAediting_6003(6851939, +), CAediting_6004(6851941, +), CAediting_6005(6851942, +), CAediting_6006(6851946, +), CAediting_6007(6851959, +), CAediting_6008(6851964, +), CAediting_6009(6851989, +), CAediting_6010(6859512, +), CAediting_6011(6860642, +), CAediting_6012(6860648, +), CAediting_6013(6864991, +), CAediting_6014(6881704, +), CAediting_6015(6881751, +), CAediting_6016(6881756, +), CAediting_6017(6881801, +), CAediting_6018(6881817, +), CAediting_6019(6882983, +), CAediting_6020(6883035, +), CAediting_6021(6883154, +), CAediting_6022(6893129, +), CAediting_6023(6893130, +), CAediting_6024(6893132, +), CAediting_6025(6893159, +), CAediting_6026(6893160, +), CAediting_6027(6893165, +), CAediting_6028(6893202, +), CAediting_6029(6893248, +), CAediting_6030(6893249, +), CAediting_6031(7111829, +), CAediting_6032(7270772, +), CAediting_6033(7274887, +), CAediting_6034(7274918, +), CAediting_6035(7274935, +), CAediting_6036(7274980, +), CAediting_6037(7274989, +), CAediting_6038(7274990, +), CAediting_6039(7274995, +), CAediting_6040(7275022, +), CAediting_6041(7275062, +), CAediting_6042(7275063, +), CAediting_6043(7275087, +), CAediting_6044(7275094, +), CAediting_6045(7327285, +), CAediting_6046(7354930, +), CAediting_6047(7354946, +), CAediting_6048(7354947, +), CAediting_6049(7354959, +), CAediting_6050(7354996, +), CAediting_6051(7355086, +), CAediting_6052(7355241, +), CAediting_6053(7355263, +), CAediting_6054(7423349, +), CAediting_6055(7423350, +), CAediting_6056(7423418, +), CAediting_6057(7701629, +), CAediting_6058(7701672, +), CAediting_6059(7706987, +), CAediting_6060(7707158, +), CAediting_6061(7707567, +), CAediting_6062(7708307, +), CAediting_6063(7708378, +), CAediting_6064(7708439, +), CAediting_6065(7710336, +), CAediting_6066(7710343, +), CAediting_6067(7710388, +), CAediting_6068(7710407, +), CAediting_6069(7710439, +), CAediting_6070(7710440, +), CAediting_6071(7710489, +), CAediting_6072(7710493, +), CAediting_6073(7710496, +), CAediting_6074(7710502, +), CAediting_6075(7710503, +), CAediting_6076(7710506, +), CAediting_6077(7710509, +), CAediting_6078(7710550, +), CAediting_6079(7710556, +), CAediting_6080(7710571, +), CAediting_6081(7712555, +), CAediting_6082(7712587, +), CAediting_6083(7717600, +), CAediting_6084(7717604, +), CAediting_6085(7717640, +), CAediting_6086(7720515, +), CAediting_6087(7721888, +), CAediting_6088(7721891, +), CAediting_6089(7722905, +), CAediting_6090(7731302, +), CAediting_6091(7735374, +), CAediting_6092(7735377, +), CAediting_6093(7735395, +), CAediting_6094(7765876, +), CAediting_6095(7765877, +), CAediting_6096(7765880, +),

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RNA editing positional annotations for CAMTA1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_5899	chr1_6800150_+	ncRNA_intronic
CAediting_5900	chr1_6800151_+	ncRNA_intronic
CAediting_5901	chr1_6818879_+	ncRNA_intronic
CAediting_5902	chr1_6829163_+	ncRNA_intronic
CAediting_5903	chr1_6830913_+	ncRNA_intronic
CAediting_5904	chr1_6838780_+	ncRNA_intronic
CAediting_5905	chr1_6838836_+	ncRNA_intronic
CAediting_5906	chr1_6838859_+	ncRNA_intronic
CAediting_5907	chr1_6838890_+	ncRNA_intronic
CAediting_5908	chr1_6838896_+	ncRNA_intronic
CAediting_5909	chr1_6838931_+	ncRNA_intronic
CAediting_5910	chr1_6839031_+	ncRNA_intronic
CAediting_5911	chr1_6839127_+	ncRNA_intronic
CAediting_5912	chr1_6839128_+	ncRNA_intronic
CAediting_5913	chr1_6839261_+	ncRNA_intronic
CAediting_5914	chr1_6839262_+	ncRNA_intronic
CAediting_5915	chr1_6839267_+	ncRNA_intronic
CAediting_5916	chr1_6839284_+	ncRNA_intronic
CAediting_5917	chr1_6839302_+	ncRNA_intronic
CAediting_5918	chr1_6839303_+	ncRNA_intronic
CAediting_5919	chr1_6842803_+	ncRNA_intronic
CAediting_5920	chr1_6842804_+	ncRNA_intronic
CAediting_5921	chr1_6842825_+	ncRNA_intronic
CAediting_5922	chr1_6843597_+	ncRNA_intronic
CAediting_5923	chr1_6843609_+	ncRNA_intronic
CAediting_5924	chr1_6843616_+	ncRNA_intronic
CAediting_5925	chr1_6843621_+	ncRNA_intronic
CAediting_5926	chr1_6843660_+	ncRNA_intronic
CAediting_5927	chr1_6843689_+	ncRNA_intronic
CAediting_5928	chr1_6843700_+	ncRNA_intronic
CAediting_5929	chr1_6843723_+	ncRNA_intronic
CAediting_5930	chr1_6843732_+	ncRNA_intronic
CAediting_5931	chr1_6843754_+	ncRNA_intronic
CAediting_5932	chr1_6844399_+	ncRNA_intronic
CAediting_5933	chr1_6844414_+	ncRNA_intronic
CAediting_5934	chr1_6844418_+	ncRNA_intronic
CAediting_5935	chr1_6844462_+	ncRNA_intronic
CAediting_5936	chr1_6844470_+	ncRNA_intronic
CAediting_5937	chr1_6844473_+	ncRNA_intronic
CAediting_5938	chr1_6844533_+	ncRNA_intronic
CAediting_5939	chr1_6844535_+	ncRNA_intronic
CAediting_5940	chr1_6844536_+	ncRNA_intronic
CAediting_5941	chr1_6844539_+	ncRNA_intronic
CAediting_5942	chr1_6844549_+	ncRNA_intronic
CAediting_5943	chr1_6844565_+	ncRNA_intronic
CAediting_5944	chr1_6844571_+	ncRNA_intronic
CAediting_5945	chr1_6844575_+	ncRNA_intronic
CAediting_5946	chr1_6844582_+	ncRNA_intronic
CAediting_5947	chr1_6844598_+	ncRNA_intronic
CAediting_5948	chr1_6844631_+	ncRNA_intronic
CAediting_5949	chr1_6844636_+	ncRNA_intronic
CAediting_5950	chr1_6844638_+	ncRNA_intronic
CAediting_5951	chr1_6844656_+	ncRNA_intronic
CAediting_5952	chr1_6847570_+	ncRNA_intronic
CAediting_5953	chr1_6847657_+	ncRNA_intronic
CAediting_5954	chr1_6848067_+	ncRNA_intronic
CAediting_5955	chr1_6848232_+	ncRNA_intronic
CAediting_5956	chr1_6848248_+	ncRNA_intronic
CAediting_5957	chr1_6848259_+	ncRNA_intronic
CAediting_5958	chr1_6848261_+	ncRNA_intronic
CAediting_5959	chr1_6848283_+	ncRNA_intronic
CAediting_5960	chr1_6848288_+	ncRNA_intronic
CAediting_5961	chr1_6848337_+	ncRNA_intronic
CAediting_5962	chr1_6848342_+	ncRNA_intronic
CAediting_5963	chr1_6848384_+	ncRNA_intronic
CAediting_5964	chr1_6848410_+	ncRNA_intronic
CAediting_5965	chr1_6848411_+	ncRNA_intronic
CAediting_5966	chr1_6848431_+	ncRNA_intronic
CAediting_5967	chr1_6849779_+	ncRNA_intronic
CAediting_5968	chr1_6849785_+	ncRNA_intronic
CAediting_5969	chr1_6849809_+	ncRNA_intronic
CAediting_5970	chr1_6849833_+	ncRNA_intronic
CAediting_5971	chr1_6849849_+	ncRNA_intronic
CAediting_5972	chr1_6849856_+	ncRNA_intronic
CAediting_5973	chr1_6849859_+	ncRNA_intronic
CAediting_5974	chr1_6849870_+	ncRNA_intronic
CAediting_5975	chr1_6849884_+	ncRNA_intronic
CAediting_5976	chr1_6849885_+	ncRNA_intronic
CAediting_5977	chr1_6849888_+	ncRNA_intronic
CAediting_5978	chr1_6849892_+	ncRNA_intronic
CAediting_5979	chr1_6849894_+	ncRNA_intronic
CAediting_5980	chr1_6849914_+	ncRNA_intronic
CAediting_5981	chr1_6849915_+	ncRNA_intronic
CAediting_5982	chr1_6849920_+	ncRNA_intronic
CAediting_5983	chr1_6849924_+	ncRNA_intronic
CAediting_5984	chr1_6849931_+	ncRNA_intronic
CAediting_5985	chr1_6849946_+	ncRNA_intronic
CAediting_5986	chr1_6849947_+	ncRNA_intronic
CAediting_5987	chr1_6849950_+	ncRNA_intronic
CAediting_5988	chr1_6849955_+	ncRNA_intronic
CAediting_5989	chr1_6849956_+	ncRNA_intronic
CAediting_5990	chr1_6849963_+	ncRNA_intronic
CAediting_5991	chr1_6849976_+	ncRNA_intronic
CAediting_5992	chr1_6849980_+	ncRNA_intronic
CAediting_5993	chr1_6849990_+	ncRNA_intronic
CAediting_5994	chr1_6850017_+	ncRNA_intronic
CAediting_5995	chr1_6851642_+	ncRNA_intronic
CAediting_5996	chr1_6851688_+	ncRNA_intronic
CAediting_5997	chr1_6851700_+	ncRNA_intronic
CAediting_5998	chr1_6851863_+	ncRNA_intronic
CAediting_5999	chr1_6851893_+	ncRNA_intronic
CAediting_6000	chr1_6851894_+	ncRNA_intronic
CAediting_6001	chr1_6851934_+	ncRNA_intronic
CAediting_6002	chr1_6851935_+	ncRNA_intronic
CAediting_6003	chr1_6851939_+	ncRNA_intronic
CAediting_6004	chr1_6851941_+	ncRNA_intronic
CAediting_6005	chr1_6851942_+	ncRNA_intronic
CAediting_6006	chr1_6851946_+	ncRNA_intronic
CAediting_6007	chr1_6851959_+	ncRNA_intronic
CAediting_6008	chr1_6851964_+	ncRNA_intronic
CAediting_6009	chr1_6851989_+	ncRNA_intronic
CAediting_6010	chr1_6859512_+	ncRNA_intronic
CAediting_6011	chr1_6860642_+	ncRNA_intronic
CAediting_6012	chr1_6860648_+	ncRNA_intronic
CAediting_6013	chr1_6864991_+	ncRNA_intronic
CAediting_6014	chr1_6881704_+	ncRNA_intronic
CAediting_6015	chr1_6881751_+	ncRNA_intronic
CAediting_6016	chr1_6881756_+	ncRNA_intronic
CAediting_6017	chr1_6881801_+	ncRNA_intronic
CAediting_6018	chr1_6881817_+	ncRNA_intronic
CAediting_6019	chr1_6882983_+	ncRNA_intronic
CAediting_6020	chr1_6883035_+	ncRNA_intronic
CAediting_6021	chr1_6883154_+	ncRNA_intronic
CAediting_6022	chr1_6893129_+	intronic
CAediting_6023	chr1_6893130_+	intronic
CAediting_6024	chr1_6893132_+	intronic
CAediting_6025	chr1_6893159_+	intronic
CAediting_6026	chr1_6893160_+	intronic
CAediting_6027	chr1_6893165_+	intronic
CAediting_6028	chr1_6893202_+	intronic
CAediting_6029	chr1_6893248_+	intronic
CAediting_6030	chr1_6893249_+	intronic
CAediting_6031	chr1_7111829_+	intronic
CAediting_6032	chr1_7270772_+	intronic
CAediting_6033	chr1_7274887_+	intronic
CAediting_6034	chr1_7274918_+	intronic
CAediting_6035	chr1_7274935_+	intronic
CAediting_6036	chr1_7274980_+	intronic
CAediting_6037	chr1_7274989_+	intronic
CAediting_6038	chr1_7274990_+	intronic
CAediting_6039	chr1_7274995_+	intronic
CAediting_6040	chr1_7275022_+	intronic
CAediting_6041	chr1_7275062_+	intronic
CAediting_6042	chr1_7275063_+	intronic
CAediting_6043	chr1_7275087_+	intronic
CAediting_6044	chr1_7275094_+	intronic
CAediting_6045	chr1_7327285_+	intronic
CAediting_6046	chr1_7354930_+	intronic
CAediting_6047	chr1_7354946_+	intronic
CAediting_6048	chr1_7354947_+	intronic
CAediting_6049	chr1_7354959_+	intronic
CAediting_6050	chr1_7354996_+	intronic
CAediting_6051	chr1_7355086_+	intronic
CAediting_6052	chr1_7355241_+	intronic
CAediting_6053	chr1_7355263_+	intronic
CAediting_6054	chr1_7423349_+	intronic
CAediting_6055	chr1_7423350_+	intronic
CAediting_6056	chr1_7423418_+	intronic
CAediting_6057	chr1_7701629_+	intronic
CAediting_6058	chr1_7701672_+	intronic
CAediting_6059	chr1_7706987_+	intronic
CAediting_6060	chr1_7707158_+	intronic
CAediting_6061	chr1_7707567_+	intronic
CAediting_6062	chr1_7708307_+	intronic
CAediting_6063	chr1_7708378_+	intronic
CAediting_6064	chr1_7708439_+	intronic
CAediting_6065	chr1_7710336_+	intronic
CAediting_6066	chr1_7710343_+	intronic
CAediting_6067	chr1_7710388_+	intronic
CAediting_6068	chr1_7710407_+	intronic
CAediting_6069	chr1_7710439_+	intronic
CAediting_6070	chr1_7710440_+	intronic
CAediting_6071	chr1_7710489_+	intronic
CAediting_6072	chr1_7710493_+	intronic
CAediting_6073	chr1_7710496_+	intronic
CAediting_6074	chr1_7710502_+	intronic
CAediting_6075	chr1_7710503_+	intronic
CAediting_6076	chr1_7710506_+	intronic
CAediting_6077	chr1_7710509_+	intronic
CAediting_6078	chr1_7710550_+	intronic
CAediting_6079	chr1_7710556_+	intronic
CAediting_6080	chr1_7710571_+	intronic
CAediting_6081	chr1_7712555_+	intronic
CAediting_6082	chr1_7712587_+	intronic
CAediting_6083	chr1_7717600_+	intronic
CAediting_6084	chr1_7717604_+	intronic
CAediting_6085	chr1_7717640_+	intronic
CAediting_6086	chr1_7720515_+	intronic
CAediting_6087	chr1_7721888_+	intronic
CAediting_6088	chr1_7721891_+	intronic
CAediting_6089	chr1_7722905_+	intronic
CAediting_6090	chr1_7731302_+	intronic
CAediting_6091	chr1_7735374_+	intronic
CAediting_6092	chr1_7735377_+	intronic
CAediting_6093	chr1_7735395_+	intronic
CAediting_6094	chr1_7765876_+	intronic
CAediting_6095	chr1_7765877_+	intronic
CAediting_6096	chr1_7765880_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_5899	chr1_6800150_+	SINE	Alu	AluJo
CAediting_5900	chr1_6800151_+	SINE	Alu	AluJo
CAediting_5901	chr1_6818879_+	SINE	Alu	AluJb
CAediting_5902	chr1_6829163_+	SINE	Alu	AluSz6
CAediting_5903	chr1_6830913_+	SINE	Alu	AluY
CAediting_5904	chr1_6838780_+	SINE	Alu	AluJr
CAediting_5905	chr1_6838836_+	SINE	Alu	AluJr
CAediting_5906	chr1_6838859_+	SINE	Alu	AluJr
CAediting_5907	chr1_6838890_+	SINE	Alu	AluJr
CAediting_5908	chr1_6838896_+	SINE	Alu	AluJr
CAediting_5909	chr1_6838931_+	SINE	Alu	AluJr
CAediting_5910	chr1_6839031_+	SINE	Alu	AluJr
CAediting_5911	chr1_6839127_+	SINE	Alu	AluSc8
CAediting_5912	chr1_6839128_+	SINE	Alu	AluSc8
CAediting_5913	chr1_6839261_+	SINE	Alu	AluSc8
CAediting_5914	chr1_6839262_+	SINE	Alu	AluSc8
CAediting_5915	chr1_6839267_+	SINE	Alu	AluSc8
CAediting_5916	chr1_6839284_+	SINE	Alu	AluSc8
CAediting_5917	chr1_6839302_+	SINE	Alu	AluSc8
CAediting_5918	chr1_6839303_+	SINE	Alu	AluSc8
CAediting_5919	chr1_6842803_+	SINE	Alu	AluSq2
CAediting_5920	chr1_6842804_+	SINE	Alu	AluSq2
CAediting_5921	chr1_6842825_+	SINE	Alu	AluSq2
CAediting_5922	chr1_6843597_+	SINE	Alu	AluSx
CAediting_5923	chr1_6843609_+	SINE	Alu	AluSx
CAediting_5924	chr1_6843616_+	SINE	Alu	AluSx
CAediting_5925	chr1_6843621_+	SINE	Alu	AluSx
CAediting_5926	chr1_6843660_+	SINE	Alu	AluSx
CAediting_5927	chr1_6843689_+	SINE	Alu	AluSx
CAediting_5928	chr1_6843700_+	SINE	Alu	AluSx
CAediting_5929	chr1_6843723_+	SINE	Alu	AluSx
CAediting_5930	chr1_6843732_+	SINE	Alu	AluSx
CAediting_5931	chr1_6843754_+	SINE	Alu	AluSx
CAediting_5932	chr1_6844399_+	SINE	Alu	AluJb
CAediting_5933	chr1_6844414_+	SINE	Alu	AluJb
CAediting_5934	chr1_6844418_+	SINE	Alu	AluJb
CAediting_5935	chr1_6844462_+	SINE	Alu	AluJb
CAediting_5936	chr1_6844470_+	SINE	Alu	AluJb
CAediting_5937	chr1_6844473_+	SINE	Alu	AluJb
CAediting_5938	chr1_6844533_+	SINE	Alu	AluJb
CAediting_5939	chr1_6844535_+	SINE	Alu	AluJb
CAediting_5940	chr1_6844536_+	SINE	Alu	AluJb
CAediting_5941	chr1_6844539_+	SINE	Alu	AluJb
CAediting_5942	chr1_6844549_+	SINE	Alu	AluJb
CAediting_5943	chr1_6844565_+	SINE	Alu	AluJb
CAediting_5944	chr1_6844571_+	SINE	Alu	AluJb
CAediting_5945	chr1_6844575_+	SINE	Alu	AluJb
CAediting_5946	chr1_6844582_+	SINE	Alu	AluJb
CAediting_5947	chr1_6844598_+	SINE	Alu	AluJb
CAediting_5948	chr1_6844631_+	SINE	Alu	AluJb
CAediting_5949	chr1_6844636_+	SINE	Alu	AluJb
CAediting_5950	chr1_6844638_+	SINE	Alu	AluJb
CAediting_5951	chr1_6844656_+	SINE	Alu	AluJb
CAediting_5952	chr1_6847570_+	SINE	Alu	AluSx
CAediting_5953	chr1_6847657_+	SINE	Alu	AluSx
CAediting_5954	chr1_6848067_+	SINE	Alu	AluSx
CAediting_5955	chr1_6848232_+	SINE	Alu	AluJr
CAediting_5956	chr1_6848248_+	SINE	Alu	AluJr
CAediting_5957	chr1_6848259_+	SINE	Alu	AluJr
CAediting_5958	chr1_6848261_+	SINE	Alu	AluJr
CAediting_5959	chr1_6848283_+	SINE	Alu	AluJr
CAediting_5960	chr1_6848288_+	SINE	Alu	AluJr
CAediting_5961	chr1_6848337_+	SINE	Alu	AluJr
CAediting_5962	chr1_6848342_+	SINE	Alu	AluJr
CAediting_5963	chr1_6848384_+	SINE	Alu	AluJr
CAediting_5964	chr1_6848410_+	SINE	Alu	AluJr
CAediting_5965	chr1_6848411_+	SINE	Alu	AluJr
CAediting_5966	chr1_6848431_+	SINE	Alu	AluJr
CAediting_5967	chr1_6849779_+	SINE	Alu	AluSz6
CAediting_5968	chr1_6849785_+	SINE	Alu	AluSz6
CAediting_5969	chr1_6849809_+	SINE	Alu	AluSz6
CAediting_5970	chr1_6849833_+	SINE	Alu	AluSz6
CAediting_5971	chr1_6849849_+	SINE	Alu	AluSz6
CAediting_5972	chr1_6849856_+	SINE	Alu	AluSz6
CAediting_5973	chr1_6849859_+	SINE	Alu	AluSz6
CAediting_5974	chr1_6849870_+	SINE	Alu	AluSz6
CAediting_5975	chr1_6849884_+	SINE	Alu	AluSz6
CAediting_5976	chr1_6849885_+	SINE	Alu	AluSz6
CAediting_5977	chr1_6849888_+	SINE	Alu	AluSz6
CAediting_5978	chr1_6849892_+	SINE	Alu	AluSz6
CAediting_5979	chr1_6849894_+	SINE	Alu	AluSz6
CAediting_5980	chr1_6849914_+	SINE	Alu	AluSz6
CAediting_5981	chr1_6849915_+	SINE	Alu	AluSz6
CAediting_5982	chr1_6849920_+	SINE	Alu	AluSz6
CAediting_5983	chr1_6849924_+	SINE	Alu	AluSz6
CAediting_5984	chr1_6849931_+	SINE	Alu	AluSz6
CAediting_5985	chr1_6849946_+	SINE	Alu	AluSz6
CAediting_5986	chr1_6849947_+	SINE	Alu	AluSz6
CAediting_5987	chr1_6849950_+	SINE	Alu	AluSz6
CAediting_5988	chr1_6849955_+	SINE	Alu	AluSz6
CAediting_5989	chr1_6849956_+	SINE	Alu	AluSz6
CAediting_5990	chr1_6849963_+	SINE	Alu	AluSz6
CAediting_5991	chr1_6849976_+	SINE	Alu	AluSz6
CAediting_5992	chr1_6849980_+	SINE	Alu	AluSz6
CAediting_5993	chr1_6849990_+	SINE	Alu	AluSz6
CAediting_5994	chr1_6850017_+	SINE	Alu	AluSz6
CAediting_5995	chr1_6851642_+	SINE	Alu	AluSz6
CAediting_5996	chr1_6851688_+	SINE	Alu	AluSz6
CAediting_5997	chr1_6851700_+	SINE	Alu	AluSz6
CAediting_5998	chr1_6851863_+	SINE	Alu	AluSz6
CAediting_5999	chr1_6851893_+	SINE	Alu	AluSz6
CAediting_6000	chr1_6851894_+	SINE	Alu	AluSz6
CAediting_6001	chr1_6851934_+	SINE	Alu	AluSz6
CAediting_6002	chr1_6851935_+	SINE	Alu	AluSz6
CAediting_6003	chr1_6851939_+	SINE	Alu	AluSz6
CAediting_6004	chr1_6851941_+	SINE	Alu	AluSz6
CAediting_6005	chr1_6851942_+	SINE	Alu	AluSz6
CAediting_6006	chr1_6851946_+	SINE	Alu	AluSz6
CAediting_6007	chr1_6851959_+	SINE	Alu	AluSz6
CAediting_6008	chr1_6851964_+	SINE	Alu	AluSz6
CAediting_6009	chr1_6851989_+	SINE	Alu	AluSz6
CAediting_6010	chr1_6859512_+	SINE	Alu	AluJo
CAediting_6011	chr1_6860642_+	SINE	Alu	AluSz
CAediting_6012	chr1_6860648_+	SINE	Alu	AluSz
CAediting_6013	chr1_6864991_+	SINE	Alu	AluJo
CAediting_6014	chr1_6881704_+	SINE	Alu	AluSx1
CAediting_6015	chr1_6881751_+	SINE	Alu	AluSx1
CAediting_6016	chr1_6881756_+	SINE	Alu	AluSx1
CAediting_6017	chr1_6881801_+	SINE	Alu	AluSx1
CAediting_6018	chr1_6881817_+	SINE	Alu	AluSx1
CAediting_6019	chr1_6882983_+	SINE	Alu	AluSz6
CAediting_6020	chr1_6883035_+	SINE	Alu	AluSz6
CAediting_6021	chr1_6883154_+	SINE	Alu	AluSz6
CAediting_6022	chr1_6893129_+	SINE	Alu	AluSx3
CAediting_6023	chr1_6893130_+	SINE	Alu	AluSx3
CAediting_6024	chr1_6893132_+	SINE	Alu	AluSx3
CAediting_6025	chr1_6893159_+	SINE	Alu	AluSx3
CAediting_6026	chr1_6893160_+	SINE	Alu	AluSx3
CAediting_6027	chr1_6893165_+	SINE	Alu	AluSx3
CAediting_6028	chr1_6893202_+	SINE	Alu	AluSx3
CAediting_6029	chr1_6893248_+	SINE	Alu	AluSx3
CAediting_6030	chr1_6893249_+	SINE	Alu	AluSx3
CAediting_6031	chr1_7111829_+	SINE	Alu	AluSc8
CAediting_6032	chr1_7270772_+	SINE	Alu	FLAM_A
CAediting_6033	chr1_7274887_+	SINE	Alu	AluSx1
CAediting_6034	chr1_7274918_+	SINE	Alu	AluSx1
CAediting_6035	chr1_7274935_+	SINE	Alu	AluSx1
CAediting_6036	chr1_7274980_+	SINE	Alu	AluSx1
CAediting_6037	chr1_7274989_+	SINE	Alu	AluSx1
CAediting_6038	chr1_7274990_+	SINE	Alu	AluSx1
CAediting_6039	chr1_7274995_+	SINE	Alu	AluSx1
CAediting_6040	chr1_7275022_+	SINE	Alu	AluSx1
CAediting_6041	chr1_7275062_+	SINE	Alu	AluSx1
CAediting_6042	chr1_7275063_+	SINE	Alu	AluSx1
CAediting_6043	chr1_7275087_+	SINE	Alu	AluSx1
CAediting_6044	chr1_7275094_+	SINE	Alu	AluSx1
CAediting_6045	chr1_7327285_+	SINE	Alu	AluYc3
CAediting_6046	chr1_7354930_+	SINE	Alu	AluSx1
CAediting_6047	chr1_7354946_+	SINE	Alu	AluSx1
CAediting_6048	chr1_7354947_+	SINE	Alu	AluSx1
CAediting_6049	chr1_7354959_+	SINE	Alu	AluSx1
CAediting_6050	chr1_7354996_+	SINE	Alu	AluSx1
CAediting_6051	chr1_7355086_+	SINE	Alu	AluSx1
CAediting_6052	chr1_7355241_+	SINE	Alu	AluJb
CAediting_6053	chr1_7355263_+	SINE	Alu	AluJb
CAediting_6054	chr1_7423349_+	SINE	Alu	AluSq2
CAediting_6055	chr1_7423350_+	SINE	Alu	AluSq2
CAediting_6056	chr1_7423418_+	SINE	Alu	AluSq2
CAediting_6057	chr1_7701629_+	SINE	Alu	AluJb
CAediting_6058	chr1_7701672_+	SINE	Alu	AluJb
CAediting_6059	chr1_7706987_+	SINE	Alu	AluSg
CAediting_6060	chr1_7707158_+	SINE	Alu	AluSg
CAediting_6061	chr1_7707567_+	SINE	Alu	AluJb
CAediting_6062	chr1_7708307_+	SINE	Alu	AluJb
CAediting_6063	chr1_7708378_+	SINE	Alu	AluJo
CAediting_6064	chr1_7708439_+	SINE	Alu	AluJo
CAediting_6065	chr1_7710336_+	SINE	Alu	AluJr
CAediting_6066	chr1_7710343_+	SINE	Alu	AluJr
CAediting_6067	chr1_7710388_+	SINE	Alu	AluJr
CAediting_6068	chr1_7710407_+	SINE	Alu	AluJr
CAediting_6069	chr1_7710439_+	SINE	Alu	AluJr
CAediting_6070	chr1_7710440_+	SINE	Alu	AluJr
CAediting_6071	chr1_7710489_+	SINE	Alu	AluJr
CAediting_6072	chr1_7710493_+	SINE	Alu	AluJr
CAediting_6073	chr1_7710496_+	SINE	Alu	AluJr
CAediting_6074	chr1_7710502_+	SINE	Alu	AluJr
CAediting_6075	chr1_7710503_+	SINE	Alu	AluJr
CAediting_6076	chr1_7710506_+	SINE	Alu	AluJr
CAediting_6077	chr1_7710509_+	SINE	Alu	AluJr
CAediting_6078	chr1_7710550_+	SINE	Alu	AluJr
CAediting_6079	chr1_7710556_+	SINE	Alu	AluJr
CAediting_6080	chr1_7710571_+	SINE	Alu	AluJr
CAediting_6081	chr1_7712555_+	SINE	Alu	AluJb
CAediting_6082	chr1_7712587_+	SINE	Alu	AluJb
CAediting_6083	chr1_7717600_+	SINE	Alu	AluJb
CAediting_6084	chr1_7717604_+	SINE	Alu	AluJb
CAediting_6085	chr1_7717640_+	SINE	Alu	AluJb
CAediting_6086	chr1_7720515_+	SINE	Alu	AluSx1
CAediting_6087	chr1_7721888_+	SINE	Alu	AluSx
CAediting_6088	chr1_7721891_+	SINE	Alu	AluSx
CAediting_6089	chr1_7722905_+	SINE	Alu	FLAM_C
CAediting_6090	chr1_7731302_+	SINE	Alu	AluSg
CAediting_6091	chr1_7735374_+	SINE	Alu	AluSz
CAediting_6092	chr1_7735377_+	SINE	Alu	AluSz
CAediting_6093	chr1_7735395_+	SINE	Alu	AluSz
CAediting_6094	chr1_7765876_+	SINE	Alu	AluY
CAediting_6095	chr1_7765877_+	SINE	Alu	AluY
CAediting_6096	chr1_7765880_+	SINE	Alu	AluY

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RNA A-to-I editing events in the alternative splicing sites for CAMTA1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000171735.17.CAMTA1.

Correlation between RNA A-to-I editing and PSI for ENSG00000171735.17.CAMTA1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CAMTA1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CAMTA1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CAMTA1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000171735.17	ENST00000473578	hsa-miR-4477b	6871930	6871937	8mer-1a	6871916	6871937	156	-14.64
CAediting_688080	chr9_63819626_+	ENSG00000171735.17	ENST00000467404	hsa-miR-4477b	6871930	6871937	8mer-1a	6871916	6871937	156	-14.64
CAediting_1229414	chr17_67471546_+	ENSG00000171735.17	ENST00000303635	hsa-miR-548aa	7768245	7768251	7mer-m8	7768226	7768252	156	-13.51
CAediting_1368054	chr19_46709310_-	ENSG00000171735.17	ENST00000303635	hsa-miR-320e	7768878	7768884	7mer-m8	7768868	7768885	147	-16.19
CAediting_1229415	chr17_67471547_+	ENSG00000171735.17	ENST00000557126	hsa-miR-548aa	6887789	6887796	8mer-1a	6887771	6887796	149	-9.7
CAediting_1229415	chr17_67471547_+	ENSG00000171735.17	ENST00000482934	hsa-miR-548aa	6887789	6887796	8mer-1a	6887771	6887796	149	-9.7

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1306324	chr19_13836464_-	ENSG00000171735.17	ENST00000303635	hsa-miR-27a-3p	7768448	7768454	7mer-m8	7768434	7768455	146	-20.84
CAediting_1306324	chr19_13836464_-	ENSG00000171735.17	ENST00000303635	hsa-miR-27a-3p	7769149	7769156	8mer-1a	7769137	7769156	143	-13.18
CAediting_1351755	chr19_40282625_-	ENSG00000171735.17	ENST00000303635	hsa-miR-641	7768649	7768655	7mer-m8	7768631	7768656	151	-13.55
CAediting_1351755	chr19_40282625_-	ENSG00000171735.17	ENST00000303635	hsa-miR-641	7767124	7767130	7mer-m8	7767108	7767131	146	-11.43

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CAMTA1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CAMTA1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for CAMTA1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for CAMTA1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for CAMTA1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CAMTA1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
CAMTA1	C0206732	Epithelioid hemangioendothelioma	1	ORPHANET
CAMTA1	C3553661	CEREBELLAR ATAXIA, NONPROGRESSIVE, WITH MENTAL RETARDATION	1	CTD_human;GENOMICS_ENGLAND;ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene