CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: FAF2 (CAeditome ID:23197)

Gene summary for FAF2

check button Gene summary
Gene informationGene symbol

FAF2

Gene ID

23197

Gene nameFas associated factor family member 2
SynonymsETEA|UBXD8|UBXN3B
Cytomap

5q35.2

Type of geneprotein-coding
DescriptionFAS-associated factor 2UBX domain containing 8UBX domain protein 3BUBX domain-containing protein 3BUBX domain-containing protein 8expressed in T-cells and eosinophils in atopic dermatitis
Modification date20210518
UniProtAcc

Q96CS3

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
FAF2

GO:0031625

FAS-associated factor 2

18775313

FAF2

GO:0035473

FAS-associated factor 2

23297223

FAF2

GO:0043130

FAS-associated factor 2

18775313

FAF2

GO:0055102

FAS-associated factor 2

23297223

FAF2

GO:0005783

FAS-associated factor 2

0000052

FAF2

GO:0005783

FAS-associated factor 2

23297223

FAF2

GO:0005811

FAS-associated factor 2

0000052

FAF2

GO:0005811

FAS-associated factor 2

14741744

FAF2

GO:0005811

FAS-associated factor 2

23297223

FAF2

GO:0034098

FAS-associated factor 2

18775313


Top

RNA A-to-I events for FAF2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000113194.11

check button RNA A-to-I editing events in Cancer.
CAediting_449623(176449460, +), CAediting_449624(176450671, +), CAediting_449625(176452248, +), CAediting_449626(176452267, +), CAediting_449627(176453794, +), CAediting_449628(176453800, +), CAediting_449629(176453801, +), CAediting_449630(176453805, +), CAediting_449631(176453806, +), CAediting_449632(176453858, +), CAediting_449633(176453863, +), CAediting_449634(176453868, +), CAediting_449635(176453878, +), CAediting_449636(176453892, +), CAediting_449637(176453957, +), CAediting_449638(176453958, +), CAediting_449639(176453981, +), CAediting_449640(176454160, +), CAediting_449641(176454164, +), CAediting_449642(176454168, +), CAediting_449643(176454183, +), CAediting_449644(176454197, +), CAediting_449645(176454206, +), CAediting_449646(176454217, +), CAediting_449647(176454235, +), CAediting_449648(176454241, +), CAediting_449649(176454243, +), CAediting_449650(176454246, +), CAediting_449651(176454250, +), CAediting_449652(176454256, +), CAediting_449653(176454273, +), CAediting_449654(176454282, +), CAediting_449655(176454294, +), CAediting_449656(176454295, +), CAediting_449657(176454299, +), CAediting_449658(176454308, +), CAediting_449659(176454373, +), CAediting_449660(176454457, +), CAediting_449661(176454458, +), CAediting_449662(176454463, +), CAediting_449663(176454471, +), CAediting_449664(176454474, +), CAediting_449665(176454480, +), CAediting_449666(176454490, +), CAediting_449667(176454493, +), CAediting_449668(176454498, +), CAediting_449669(176454499, +), CAediting_449670(176454503, +), CAediting_449671(176454527, +), CAediting_449672(176454528, +), CAediting_449673(176454538, +), CAediting_449674(176454543, +), CAediting_449675(176454549, +), CAediting_449676(176455250, +), CAediting_449677(176455374, +), CAediting_449678(176456094, +), CAediting_449679(176456574, +), CAediting_449680(176457266, +), CAediting_449681(176457288, +), CAediting_449682(176457328, +), CAediting_449683(176457330, +), CAediting_449684(176457443, +), CAediting_449685(176457465, +), CAediting_449686(176460867, +), CAediting_449687(176460872, +), CAediting_449688(176460873, +), CAediting_449689(176460921, +), CAediting_449690(176461044, +), CAediting_449691(176461188, +), CAediting_449692(176461194, +), CAediting_449693(176461203, +), CAediting_449694(176461417, +), CAediting_449695(176461418, +), CAediting_449696(176461459, +), CAediting_449697(176461517, +), CAediting_449698(176461562, +), CAediting_449699(176461563, +), CAediting_449700(176462021, +), CAediting_449701(176463115, +), CAediting_449702(176463138, +), CAediting_449703(176463188, +), CAediting_449704(176463208, +), CAediting_449705(176463212, +), CAediting_449706(176463215, +), CAediting_449707(176463216, +), CAediting_449708(176463241, +), CAediting_449709(176463250, +), CAediting_449710(176463277, +), CAediting_449711(176463290, +), CAediting_449712(176463869, +), CAediting_449713(176464146, +), CAediting_449714(176464572, +), CAediting_449715(176464579, +), CAediting_449716(176464605, +), CAediting_449717(176464936, +), CAediting_449718(176464957, +), CAediting_449719(176464962, +), CAediting_449720(176464992, +), CAediting_449721(176465713, +), CAediting_449722(176465769, +), CAediting_449723(176465772, +), CAediting_449724(176465778, +), CAediting_449725(176465782, +), CAediting_449726(176465789, +), CAediting_449727(176465802, +), CAediting_449728(176465803, +), CAediting_449729(176465807, +), CAediting_449730(176467379, +), CAediting_449731(176467386, +), CAediting_449732(176467425, +), CAediting_449733(176467431, +), CAediting_449734(176468054, +), CAediting_449735(176468059, +), CAediting_449736(176468077, +), CAediting_449737(176468080, +), CAediting_449738(176468116, +), CAediting_449739(176468128, +), CAediting_449740(176468327, +), CAediting_449741(176468330, +), CAediting_449742(176468463, +), CAediting_449743(176468671, +), CAediting_449744(176469111, +), CAediting_449745(176470473, +), CAediting_449746(176470526, +), CAediting_449747(176470527, +), CAediting_449748(176472162, +), CAediting_449749(176472179, +), CAediting_449750(176472184, +), CAediting_449751(176472518, +), CAediting_449752(176473787, +), CAediting_449753(176473818, +), CAediting_449754(176473842, +), CAediting_449755(176473866, +), CAediting_449756(176475271, +), CAediting_449757(176475279, +), CAediting_449758(176475287, +), CAediting_449759(176475335, +), CAediting_449760(176476006, +), CAediting_449761(176476732, +), CAediting_449762(176478215, +), CAediting_449763(176478219, +), CAediting_449764(176480431, +), CAediting_449765(176481793, +), CAediting_449766(176483869, +), CAediting_449767(176483874, +), CAediting_449768(176483899, +), CAediting_449769(176483913, +), CAediting_449770(176483928, +), CAediting_449771(176483954, +), CAediting_449772(176483960, +), CAediting_449773(176483964, +), CAediting_449774(176483976, +), CAediting_449775(176483986, +), CAediting_449776(176483994, +), CAediting_449777(176483995, +), CAediting_449778(176484009, +), CAediting_449779(176484015, +), CAediting_449780(176484019, +), CAediting_449781(176484024, +), CAediting_449782(176484034, +), CAediting_449783(176484055, +), CAediting_449784(176484061, +), CAediting_449785(176485753, +), CAediting_449786(176485806, +), CAediting_449787(176485823, +), CAediting_449788(176485839, +), CAediting_449789(176489552, +), CAediting_449790(176489586, +), CAediting_449791(176489637, +), CAediting_449792(176489638, +), CAediting_449793(176489642, +), CAediting_449794(176489650, +), CAediting_449795(176489655, +), CAediting_449796(176489667, +), CAediting_449797(176489677, +), CAediting_449798(176489680, +), CAediting_449799(176489683, +), CAediting_449800(176489693, +), CAediting_449801(176489703, +), CAediting_449802(176489704, +), CAediting_449803(176489809, +), CAediting_449804(176490057, +), CAediting_449805(176490062, +), CAediting_449806(176490065, +), CAediting_449807(176490145, +), CAediting_449808(176490148, +), CAediting_449809(176490150, +), CAediting_449810(176490151, +), CAediting_449811(176490160, +), CAediting_449812(176490161, +), CAediting_449813(176490164, +), CAediting_449814(176490190, +), CAediting_449815(176490196, +), CAediting_449816(176490204, +), CAediting_449817(176490217, +), CAediting_449818(176490223, +), CAediting_449819(176490231, +), CAediting_449820(176490232, +), CAediting_449821(176490239, +), CAediting_449822(176490256, +), CAediting_449823(176490268, +), CAediting_449824(176494694, +), CAediting_449825(176494794, +), CAediting_449826(176496198, +), CAediting_449827(176496205, +), CAediting_449828(176496213, +), CAediting_449829(176496215, +), CAediting_449830(176496223, +), CAediting_449831(176496224, +), CAediting_449832(176496237, +), CAediting_449833(176496246, +), CAediting_449834(176496269, +), CAediting_449835(176496289, +), CAediting_449836(176496293, +), CAediting_449837(176496297, +), CAediting_449838(176496313, +), CAediting_449839(176496916, +), CAediting_449840(176496961, +), CAediting_449841(176496981, +), CAediting_449842(176496999, +), CAediting_449843(176497003, +), CAediting_449844(176497025, +), CAediting_449845(176497917, +), CAediting_449846(176497921, +), CAediting_449847(176497922, +), CAediting_449848(176497998, +), CAediting_449849(176502459, +), CAediting_449850(176502848, +), CAediting_449851(176503467, +), CAediting_449852(176504944, +),

Top

RNA editing positional annotations for FAF2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_449623chr5_176449460_+ncRNA_intronic
CAediting_449624chr5_176450671_+ncRNA_intronic
CAediting_449625chr5_176452248_+ncRNA_intronic
CAediting_449626chr5_176452267_+ncRNA_intronic
CAediting_449627chr5_176453794_+ncRNA_intronic
CAediting_449628chr5_176453800_+ncRNA_intronic
CAediting_449629chr5_176453801_+ncRNA_intronic
CAediting_449630chr5_176453805_+ncRNA_intronic
CAediting_449631chr5_176453806_+ncRNA_intronic
CAediting_449632chr5_176453858_+ncRNA_intronic
CAediting_449633chr5_176453863_+ncRNA_intronic
CAediting_449634chr5_176453868_+ncRNA_intronic
CAediting_449635chr5_176453878_+ncRNA_intronic
CAediting_449636chr5_176453892_+ncRNA_intronic
CAediting_449637chr5_176453957_+ncRNA_intronic
CAediting_449638chr5_176453958_+ncRNA_intronic
CAediting_449639chr5_176453981_+ncRNA_intronic
CAediting_449640chr5_176454160_+ncRNA_intronic
CAediting_449641chr5_176454164_+ncRNA_intronic
CAediting_449642chr5_176454168_+ncRNA_intronic
CAediting_449643chr5_176454183_+ncRNA_intronic
CAediting_449644chr5_176454197_+ncRNA_intronic
CAediting_449645chr5_176454206_+ncRNA_intronic
CAediting_449646chr5_176454217_+ncRNA_intronic
CAediting_449647chr5_176454235_+ncRNA_intronic
CAediting_449648chr5_176454241_+ncRNA_intronic
CAediting_449649chr5_176454243_+ncRNA_intronic
CAediting_449650chr5_176454246_+ncRNA_intronic
CAediting_449651chr5_176454250_+ncRNA_intronic
CAediting_449652chr5_176454256_+ncRNA_intronic
CAediting_449653chr5_176454273_+ncRNA_intronic
CAediting_449654chr5_176454282_+ncRNA_intronic
CAediting_449655chr5_176454294_+ncRNA_intronic
CAediting_449656chr5_176454295_+ncRNA_intronic
CAediting_449657chr5_176454299_+ncRNA_intronic
CAediting_449658chr5_176454308_+ncRNA_intronic
CAediting_449659chr5_176454373_+ncRNA_intronic
CAediting_449660chr5_176454457_+ncRNA_intronic
CAediting_449661chr5_176454458_+ncRNA_intronic
CAediting_449662chr5_176454463_+ncRNA_intronic
CAediting_449663chr5_176454471_+ncRNA_intronic
CAediting_449664chr5_176454474_+ncRNA_intronic
CAediting_449665chr5_176454480_+ncRNA_intronic
CAediting_449666chr5_176454490_+ncRNA_intronic
CAediting_449667chr5_176454493_+ncRNA_intronic
CAediting_449668chr5_176454498_+ncRNA_intronic
CAediting_449669chr5_176454499_+ncRNA_intronic
CAediting_449670chr5_176454503_+ncRNA_intronic
CAediting_449671chr5_176454527_+ncRNA_intronic
CAediting_449672chr5_176454528_+ncRNA_intronic
CAediting_449673chr5_176454538_+ncRNA_intronic
CAediting_449674chr5_176454543_+ncRNA_intronic
CAediting_449675chr5_176454549_+ncRNA_intronic
CAediting_449676chr5_176455250_+ncRNA_intronic
CAediting_449677chr5_176455374_+ncRNA_intronic
CAediting_449678chr5_176456094_+ncRNA_intronic
CAediting_449679chr5_176456574_+ncRNA_intronic
CAediting_449680chr5_176457266_+ncRNA_intronic
CAediting_449681chr5_176457288_+ncRNA_intronic
CAediting_449682chr5_176457328_+ncRNA_intronic
CAediting_449683chr5_176457330_+ncRNA_intronic
CAediting_449684chr5_176457443_+ncRNA_intronic
CAediting_449685chr5_176457465_+ncRNA_intronic
CAediting_449686chr5_176460867_+ncRNA_intronic
CAediting_449687chr5_176460872_+ncRNA_intronic
CAediting_449688chr5_176460873_+ncRNA_intronic
CAediting_449689chr5_176460921_+ncRNA_intronic
CAediting_449690chr5_176461044_+ncRNA_intronic
CAediting_449691chr5_176461188_+ncRNA_intronic
CAediting_449692chr5_176461194_+ncRNA_intronic
CAediting_449693chr5_176461203_+ncRNA_intronic
CAediting_449694chr5_176461417_+ncRNA_intronic
CAediting_449695chr5_176461418_+ncRNA_intronic
CAediting_449696chr5_176461459_+ncRNA_intronic
CAediting_449697chr5_176461517_+ncRNA_intronic
CAediting_449698chr5_176461562_+ncRNA_intronic
CAediting_449699chr5_176461563_+ncRNA_intronic
CAediting_449700chr5_176462021_+ncRNA_intronic
CAediting_449701chr5_176463115_+ncRNA_intronic
CAediting_449702chr5_176463138_+ncRNA_intronic
CAediting_449703chr5_176463188_+ncRNA_intronic
CAediting_449704chr5_176463208_+ncRNA_intronic
CAediting_449705chr5_176463212_+ncRNA_intronic
CAediting_449706chr5_176463215_+ncRNA_intronic
CAediting_449707chr5_176463216_+ncRNA_intronic
CAediting_449708chr5_176463241_+ncRNA_intronic
CAediting_449709chr5_176463250_+ncRNA_intronic
CAediting_449710chr5_176463277_+ncRNA_intronic
CAediting_449711chr5_176463290_+ncRNA_intronic
CAediting_449712chr5_176463869_+ncRNA_intronic
CAediting_449713chr5_176464146_+ncRNA_intronic
CAediting_449714chr5_176464572_+ncRNA_intronic
CAediting_449715chr5_176464579_+ncRNA_intronic
CAediting_449716chr5_176464605_+ncRNA_intronic
CAediting_449717chr5_176464936_+ncRNA_intronic
CAediting_449718chr5_176464957_+ncRNA_intronic
CAediting_449719chr5_176464962_+ncRNA_intronic
CAediting_449720chr5_176464992_+ncRNA_intronic
CAediting_449721chr5_176465713_+ncRNA_intronic
CAediting_449722chr5_176465769_+ncRNA_intronic
CAediting_449723chr5_176465772_+ncRNA_intronic
CAediting_449724chr5_176465778_+ncRNA_intronic
CAediting_449725chr5_176465782_+ncRNA_intronic
CAediting_449726chr5_176465789_+ncRNA_intronic
CAediting_449727chr5_176465802_+ncRNA_intronic
CAediting_449728chr5_176465803_+ncRNA_intronic
CAediting_449729chr5_176465807_+ncRNA_intronic
CAediting_449730chr5_176467379_+ncRNA_intronic
CAediting_449731chr5_176467386_+ncRNA_intronic
CAediting_449732chr5_176467425_+ncRNA_intronic
CAediting_449733chr5_176467431_+ncRNA_intronic
CAediting_449734chr5_176468054_+ncRNA_intronic
CAediting_449735chr5_176468059_+ncRNA_intronic
CAediting_449736chr5_176468077_+ncRNA_intronic
CAediting_449737chr5_176468080_+ncRNA_intronic
CAediting_449738chr5_176468116_+ncRNA_intronic
CAediting_449739chr5_176468128_+ncRNA_intronic
CAediting_449740chr5_176468327_+ncRNA_intronic
CAediting_449741chr5_176468330_+ncRNA_intronic
CAediting_449742chr5_176468463_+ncRNA_intronic
CAediting_449743chr5_176468671_+ncRNA_intronic
CAediting_449744chr5_176469111_+ncRNA_intronic
CAediting_449745chr5_176470473_+ncRNA_intronic
CAediting_449746chr5_176470526_+ncRNA_intronic
CAediting_449747chr5_176470527_+ncRNA_intronic
CAediting_449748chr5_176472162_+ncRNA_intronic
CAediting_449749chr5_176472179_+ncRNA_intronic
CAediting_449750chr5_176472184_+ncRNA_intronic
CAediting_449751chr5_176472518_+ncRNA_intronic
CAediting_449752chr5_176473787_+ncRNA_intronic
CAediting_449753chr5_176473818_+ncRNA_intronic
CAediting_449754chr5_176473842_+ncRNA_intronic
CAediting_449755chr5_176473866_+ncRNA_intronic
CAediting_449756chr5_176475271_+ncRNA_intronic
CAediting_449757chr5_176475279_+ncRNA_intronic
CAediting_449758chr5_176475287_+ncRNA_intronic
CAediting_449759chr5_176475335_+ncRNA_intronic
CAediting_449760chr5_176476006_+ncRNA_intronic
CAediting_449761chr5_176476732_+ncRNA_intronic
CAediting_449762chr5_176478215_+ncRNA_intronic
CAediting_449763chr5_176478219_+ncRNA_intronic
CAediting_449764chr5_176480431_+ncRNA_intronic
CAediting_449765chr5_176481793_+ncRNA_intronic
CAediting_449766chr5_176483869_+ncRNA_intronic
CAediting_449767chr5_176483874_+ncRNA_intronic
CAediting_449768chr5_176483899_+ncRNA_intronic
CAediting_449769chr5_176483913_+ncRNA_intronic
CAediting_449770chr5_176483928_+ncRNA_intronic
CAediting_449771chr5_176483954_+ncRNA_intronic
CAediting_449772chr5_176483960_+ncRNA_intronic
CAediting_449773chr5_176483964_+ncRNA_intronic
CAediting_449774chr5_176483976_+ncRNA_intronic
CAediting_449775chr5_176483986_+ncRNA_intronic
CAediting_449776chr5_176483994_+ncRNA_intronic
CAediting_449777chr5_176483995_+ncRNA_intronic
CAediting_449778chr5_176484009_+ncRNA_intronic
CAediting_449779chr5_176484015_+ncRNA_intronic
CAediting_449780chr5_176484019_+ncRNA_intronic
CAediting_449781chr5_176484024_+ncRNA_intronic
CAediting_449782chr5_176484034_+ncRNA_intronic
CAediting_449783chr5_176484055_+ncRNA_intronic
CAediting_449784chr5_176484061_+ncRNA_intronic
CAediting_449785chr5_176485753_+ncRNA_intronic
CAediting_449786chr5_176485806_+ncRNA_intronic
CAediting_449787chr5_176485823_+ncRNA_intronic
CAediting_449788chr5_176485839_+ncRNA_intronic
CAediting_449789chr5_176489552_+intronic
CAediting_449790chr5_176489586_+intronic
CAediting_449791chr5_176489637_+intronic
CAediting_449792chr5_176489638_+intronic
CAediting_449793chr5_176489642_+intronic
CAediting_449794chr5_176489650_+intronic
CAediting_449795chr5_176489655_+intronic
CAediting_449796chr5_176489667_+intronic
CAediting_449797chr5_176489677_+intronic
CAediting_449798chr5_176489680_+intronic
CAediting_449799chr5_176489683_+intronic
CAediting_449800chr5_176489693_+intronic
CAediting_449801chr5_176489703_+intronic
CAediting_449802chr5_176489704_+intronic
CAediting_449803chr5_176489809_+intronic
CAediting_449804chr5_176490057_+intronic
CAediting_449805chr5_176490062_+intronic
CAediting_449806chr5_176490065_+intronic
CAediting_449807chr5_176490145_+intronic
CAediting_449808chr5_176490148_+intronic
CAediting_449809chr5_176490150_+intronic
CAediting_449810chr5_176490151_+intronic
CAediting_449811chr5_176490160_+intronic
CAediting_449812chr5_176490161_+intronic
CAediting_449813chr5_176490164_+intronic
CAediting_449814chr5_176490190_+intronic
CAediting_449815chr5_176490196_+intronic
CAediting_449816chr5_176490204_+intronic
CAediting_449817chr5_176490217_+intronic
CAediting_449818chr5_176490223_+intronic
CAediting_449819chr5_176490231_+intronic
CAediting_449820chr5_176490232_+intronic
CAediting_449821chr5_176490239_+intronic
CAediting_449822chr5_176490256_+intronic
CAediting_449823chr5_176490268_+intronic
CAediting_449824chr5_176494694_+ncRNA_intronic
CAediting_449825chr5_176494794_+ncRNA_intronic
CAediting_449826chr5_176496198_+ncRNA_intronic
CAediting_449827chr5_176496205_+ncRNA_intronic
CAediting_449828chr5_176496213_+ncRNA_intronic
CAediting_449829chr5_176496215_+ncRNA_intronic
CAediting_449830chr5_176496223_+ncRNA_intronic
CAediting_449831chr5_176496224_+ncRNA_intronic
CAediting_449832chr5_176496237_+ncRNA_intronic
CAediting_449833chr5_176496246_+ncRNA_intronic
CAediting_449834chr5_176496269_+ncRNA_intronic
CAediting_449835chr5_176496289_+ncRNA_intronic
CAediting_449836chr5_176496293_+ncRNA_intronic
CAediting_449837chr5_176496297_+ncRNA_intronic
CAediting_449838chr5_176496313_+ncRNA_intronic
CAediting_449839chr5_176496916_+ncRNA_exonic
CAediting_449840chr5_176496961_+ncRNA_exonic
CAediting_449841chr5_176496981_+ncRNA_exonic
CAediting_449842chr5_176496999_+ncRNA_intronic
CAediting_449843chr5_176497003_+ncRNA_intronic
CAediting_449844chr5_176497025_+ncRNA_intronic
CAediting_449845chr5_176497917_+ncRNA_intronic
CAediting_449846chr5_176497921_+ncRNA_intronic
CAediting_449847chr5_176497922_+ncRNA_intronic
CAediting_449848chr5_176497998_+ncRNA_intronic
CAediting_449849chr5_176502459_+intronic
CAediting_449850chr5_176502848_+intronic
CAediting_449851chr5_176503467_+intronic
CAediting_449852chr5_176504944_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_449623chr5_176449460_+SINEAluAluSx4
CAediting_449624chr5_176450671_+SINEAluAluSq4
CAediting_449625chr5_176452248_+SINEAluAluSx1
CAediting_449626chr5_176452267_+SINEAluAluSx1
CAediting_449627chr5_176453794_+SINEAluAluSx3
CAediting_449628chr5_176453800_+SINEAluAluSx3
CAediting_449629chr5_176453801_+SINEAluAluSx3
CAediting_449630chr5_176453805_+SINEAluAluSx3
CAediting_449631chr5_176453806_+SINEAluAluSx3
CAediting_449632chr5_176453858_+SINEAluAluSx3
CAediting_449633chr5_176453863_+SINEAluAluSx3
CAediting_449634chr5_176453868_+SINEAluAluSx3
CAediting_449635chr5_176453878_+SINEAluAluSx3
CAediting_449636chr5_176453892_+SINEAluAluSx3
CAediting_449637chr5_176453957_+SINEAluAluSx3
CAediting_449638chr5_176453958_+SINEAluAluSx3
CAediting_449639chr5_176453981_+SINEAluAluSx3
CAediting_449640chr5_176454160_+SINEAluAluSz
CAediting_449641chr5_176454164_+SINEAluAluSz
CAediting_449642chr5_176454168_+SINEAluAluSz
CAediting_449643chr5_176454183_+SINEAluAluSz
CAediting_449644chr5_176454197_+SINEAluAluSz
CAediting_449645chr5_176454206_+SINEAluAluSz
CAediting_449646chr5_176454217_+SINEAluAluSz
CAediting_449647chr5_176454235_+SINEAluAluSz
CAediting_449648chr5_176454241_+SINEAluAluSz
CAediting_449649chr5_176454243_+SINEAluAluSz
CAediting_449650chr5_176454246_+SINEAluAluSz
CAediting_449651chr5_176454250_+SINEAluAluSz
CAediting_449652chr5_176454256_+SINEAluAluSz
CAediting_449653chr5_176454273_+SINEAluAluSz
CAediting_449654chr5_176454282_+SINEAluAluSz
CAediting_449655chr5_176454294_+SINEAluAluSz
CAediting_449656chr5_176454295_+SINEAluAluSz
CAediting_449657chr5_176454299_+SINEAluAluSz
CAediting_449658chr5_176454308_+SINEAluAluSz
CAediting_449659chr5_176454373_+SINEAluAluSz
CAediting_449660chr5_176454457_+SINEAluAluSz6
CAediting_449661chr5_176454458_+SINEAluAluSz6
CAediting_449662chr5_176454463_+SINEAluAluSz6
CAediting_449663chr5_176454471_+SINEAluAluSz6
CAediting_449664chr5_176454474_+SINEAluAluSz6
CAediting_449665chr5_176454480_+SINEAluAluSz6
CAediting_449666chr5_176454490_+SINEAluAluSz6
CAediting_449667chr5_176454493_+SINEAluAluSz6
CAediting_449668chr5_176454498_+SINEAluAluSz6
CAediting_449669chr5_176454499_+SINEAluAluSz6
CAediting_449670chr5_176454503_+SINEAluAluSz6
CAediting_449671chr5_176454527_+SINEAluAluSz6
CAediting_449672chr5_176454528_+SINEAluAluSz6
CAediting_449673chr5_176454538_+SINEAluAluSz6
CAediting_449674chr5_176454543_+SINEAluAluSz6
CAediting_449675chr5_176454549_+SINEAluAluSz6
CAediting_449676chr5_176455250_+SINEAluAluJb
CAediting_449677chr5_176455374_+SINEAluAluJb
CAediting_449678chr5_176456094_+SINEAluAluSq
CAediting_449679chr5_176456574_+SINEAluAluJo
CAediting_449680chr5_176457266_+SINEAluAluSq2
CAediting_449681chr5_176457288_+SINEAluAluSq2
CAediting_449682chr5_176457328_+SINEAluAluSq2
CAediting_449683chr5_176457330_+SINEAluAluSq2
CAediting_449684chr5_176457443_+SINEAluAluSq2
CAediting_449685chr5_176457465_+SINEAluAluSq2
CAediting_449686chr5_176460867_+SINEAluAluJb
CAediting_449687chr5_176460872_+SINEAluAluJb
CAediting_449688chr5_176460873_+SINEAluAluJb
CAediting_449689chr5_176460921_+SINEAluAluJb
CAediting_449690chr5_176461044_+SINEAluAluSz
CAediting_449691chr5_176461188_+SINEAluAluSz
CAediting_449692chr5_176461194_+SINEAluAluSz
CAediting_449693chr5_176461203_+SINEAluAluSz
CAediting_449694chr5_176461417_+SINEAluAluJr
CAediting_449695chr5_176461418_+SINEAluAluJr
CAediting_449696chr5_176461459_+SINEAluAluJr
CAediting_449697chr5_176461517_+SINEAluAluJr
CAediting_449698chr5_176461562_+SINEAluAluJr
CAediting_449699chr5_176461563_+SINEAluAluJr
CAediting_449700chr5_176462021_+SINEAluAluSx1
CAediting_449701chr5_176463115_+SINEAluAluSx1
CAediting_449702chr5_176463138_+SINEAluAluSx1
CAediting_449703chr5_176463188_+SINEAluAluSx1
CAediting_449704chr5_176463208_+SINEAluAluSx1
CAediting_449705chr5_176463212_+SINEAluAluSx1
CAediting_449706chr5_176463215_+SINEAluAluSx1
CAediting_449707chr5_176463216_+SINEAluAluSx1
CAediting_449708chr5_176463241_+SINEAluAluSx1
CAediting_449709chr5_176463250_+SINEAluAluSx1
CAediting_449710chr5_176463277_+SINEAluAluSx1
CAediting_449711chr5_176463290_+SINEAluAluSx1
CAediting_449712chr5_176463869_+SINEAluAluSz
CAediting_449713chr5_176464146_+SINEAluAluJb
CAediting_449714chr5_176464572_+SINEAluAluJr
CAediting_449715chr5_176464579_+SINEAluAluJr
CAediting_449716chr5_176464605_+SINEAluAluJr
CAediting_449717chr5_176464936_+SINEAluAluSz
CAediting_449718chr5_176464957_+SINEAluAluSz
CAediting_449719chr5_176464962_+SINEAluAluSz
CAediting_449720chr5_176464992_+SINEAluAluSz
CAediting_449721chr5_176465713_+SINEAluAluSx
CAediting_449722chr5_176465769_+SINEAluAluSx
CAediting_449723chr5_176465772_+SINEAluAluSx
CAediting_449724chr5_176465778_+SINEAluAluSx
CAediting_449725chr5_176465782_+SINEAluAluSx
CAediting_449726chr5_176465789_+SINEAluAluSx
CAediting_449727chr5_176465802_+SINEAluAluSx
CAediting_449728chr5_176465803_+SINEAluAluSx
CAediting_449729chr5_176465807_+SINEAluAluSx
CAediting_449730chr5_176467379_+SINEAluAluSz6
CAediting_449731chr5_176467386_+SINEAluAluSz6
CAediting_449732chr5_176467425_+SINEAluAluSz6
CAediting_449733chr5_176467431_+SINEAluAluSz6
CAediting_449734chr5_176468054_+SINEAluAluSq2
CAediting_449735chr5_176468059_+SINEAluAluSq2
CAediting_449736chr5_176468077_+SINEAluAluSq2
CAediting_449737chr5_176468080_+SINEAluAluSq2
CAediting_449738chr5_176468116_+SINEAluAluSq2
CAediting_449739chr5_176468128_+SINEAluAluSq2
CAediting_449740chr5_176468327_+SINEAluAluY
CAediting_449741chr5_176468330_+SINEAluAluY
CAediting_449742chr5_176468463_+SINEAluAluY
CAediting_449743chr5_176468671_+SINEAluAluJr4
CAediting_449744chr5_176469111_+SINEAluAluSx
CAediting_449745chr5_176470473_+SINEAluAluSp
CAediting_449746chr5_176470526_+SINEAluAluSp
CAediting_449747chr5_176470527_+SINEAluAluSp
CAediting_449748chr5_176472162_+SINEAluAluSg
CAediting_449749chr5_176472179_+SINEAluAluSg
CAediting_449750chr5_176472184_+SINEAluAluSg
CAediting_449751chr5_176472518_+SINEAluAluJo
CAediting_449752chr5_176473787_+SINEAluAluJr
CAediting_449753chr5_176473818_+SINEAluAluJr
CAediting_449754chr5_176473842_+SINEAluAluJr
CAediting_449755chr5_176473866_+SINEAluAluJr
CAediting_449756chr5_176475271_+SINEAluAluJb
CAediting_449757chr5_176475279_+SINEAluAluJb
CAediting_449758chr5_176475287_+SINEAluAluJb
CAediting_449759chr5_176475335_+SINEAluAluJb
CAediting_449760chr5_176476006_+SINEAluAluJb
CAediting_449761chr5_176476732_+SINEAluAluSc8
CAediting_449762chr5_176478215_+SINEAluAluJb
CAediting_449763chr5_176478219_+SINEAluAluJb
CAediting_449764chr5_176480431_+SINEAluAluJo
CAediting_449765chr5_176481793_+SINEAluAluJr
CAediting_449766chr5_176483869_+SINEAluAluSc5
CAediting_449767chr5_176483874_+SINEAluAluSc5
CAediting_449768chr5_176483899_+SINEAluAluSc5
CAediting_449769chr5_176483913_+SINEAluAluSc5
CAediting_449770chr5_176483928_+SINEAluAluSc5
CAediting_449771chr5_176483954_+SINEAluAluSc5
CAediting_449772chr5_176483960_+SINEAluAluSc5
CAediting_449773chr5_176483964_+SINEAluAluSc5
CAediting_449774chr5_176483976_+SINEAluAluSc5
CAediting_449775chr5_176483986_+SINEAluAluSc5
CAediting_449776chr5_176483994_+SINEAluAluSc5
CAediting_449777chr5_176483995_+SINEAluAluSc5
CAediting_449778chr5_176484009_+SINEAluAluSc5
CAediting_449779chr5_176484015_+SINEAluAluSc5
CAediting_449780chr5_176484019_+SINEAluAluSc5
CAediting_449781chr5_176484024_+SINEAluAluSc5
CAediting_449782chr5_176484034_+SINEAluAluSc5
CAediting_449783chr5_176484055_+SINEAluAluSc5
CAediting_449784chr5_176484061_+SINEAluAluSc5
CAediting_449785chr5_176485753_+SINEAluFLAM_C
CAediting_449786chr5_176485806_+SINEAluFLAM_C
CAediting_449787chr5_176485823_+SINEAluFLAM_C
CAediting_449788chr5_176485839_+SINEAluFLAM_C
CAediting_449789chr5_176489552_+SINEAluAluSz6
CAediting_449790chr5_176489586_+SINEAluAluSz6
CAediting_449791chr5_176489637_+SINEAluAluSz6
CAediting_449792chr5_176489638_+SINEAluAluSz6
CAediting_449793chr5_176489642_+SINEAluAluSz6
CAediting_449794chr5_176489650_+SINEAluAluSz6
CAediting_449795chr5_176489655_+SINEAluAluSz6
CAediting_449796chr5_176489667_+SINEAluAluSz6
CAediting_449797chr5_176489677_+SINEAluAluSz6
CAediting_449798chr5_176489680_+SINEAluAluSz6
CAediting_449799chr5_176489683_+SINEAluAluSz6
CAediting_449800chr5_176489693_+SINEAluAluSz6
CAediting_449801chr5_176489703_+SINEAluAluSz6
CAediting_449802chr5_176489704_+SINEAluAluSz6
CAediting_449803chr5_176489809_+SINEAluAluSz6
CAediting_449804chr5_176490057_+SINEAluAluYk2
CAediting_449805chr5_176490062_+SINEAluAluYk2
CAediting_449806chr5_176490065_+SINEAluAluYk2
CAediting_449807chr5_176490145_+SINEAluAluYk2
CAediting_449808chr5_176490148_+SINEAluAluYk2
CAediting_449809chr5_176490150_+SINEAluAluYk2
CAediting_449810chr5_176490151_+SINEAluAluYk2
CAediting_449811chr5_176490160_+SINEAluAluYk2
CAediting_449812chr5_176490161_+SINEAluAluYk2
CAediting_449813chr5_176490164_+SINEAluAluYk2
CAediting_449814chr5_176490190_+SINEAluAluYk2
CAediting_449815chr5_176490196_+SINEAluAluYk2
CAediting_449816chr5_176490204_+SINEAluAluYk2
CAediting_449817chr5_176490217_+SINEAluAluYk2
CAediting_449818chr5_176490223_+SINEAluAluYk2
CAediting_449819chr5_176490231_+SINEAluAluYk2
CAediting_449820chr5_176490232_+SINEAluAluYk2
CAediting_449821chr5_176490239_+SINEAluAluYk2
CAediting_449822chr5_176490256_+SINEAluAluYk2
CAediting_449823chr5_176490268_+SINEAluAluYk2
CAediting_449824chr5_176494694_+SINEAluAluSz
CAediting_449825chr5_176494794_+SINEAluAluSz
CAediting_449827chr5_176496205_+SINEAluFLAM_A
CAediting_449828chr5_176496213_+SINEAluFLAM_A
CAediting_449829chr5_176496215_+SINEAluFLAM_A
CAediting_449830chr5_176496223_+SINEAluFLAM_A
CAediting_449831chr5_176496224_+SINEAluFLAM_A
CAediting_449832chr5_176496237_+SINEAluFLAM_A
CAediting_449833chr5_176496246_+SINEAluFLAM_A
CAediting_449834chr5_176496269_+SINEAluFLAM_A
CAediting_449835chr5_176496289_+SINEAluFLAM_A
CAediting_449836chr5_176496293_+SINEAluFLAM_A
CAediting_449837chr5_176496297_+SINEAluFLAM_A
CAediting_449838chr5_176496313_+SINEAluFLAM_A
CAediting_449839chr5_176496916_+SINEAluAluJo
CAediting_449840chr5_176496961_+SINEAluAluJo
CAediting_449841chr5_176496981_+SINEAluAluJo
CAediting_449842chr5_176496999_+SINEAluAluJo
CAediting_449843chr5_176497003_+SINEAluAluJo
CAediting_449844chr5_176497025_+SINEAluAluJo
CAediting_449845chr5_176497917_+SINEAluAluJb
CAediting_449846chr5_176497921_+SINEAluAluJb
CAediting_449847chr5_176497922_+SINEAluAluJb
CAediting_449848chr5_176497998_+SINEAluAluJb
CAediting_449849chr5_176502459_+SINEAluAluSp
CAediting_449850chr5_176502848_+SINEAluAluSx4
CAediting_449851chr5_176503467_+SINEAluAluSq2
CAediting_449852chr5_176504944_+SINEAluAluJb

Top

RNA A-to-I editing events in the alternative splicing sites for FAF2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000113194.11.FAF2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000113194.11.FAF2.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAF2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for FAF2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for FAF2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688081chr9_63819627_+ENSG00000113194.11ENST00000261942hsa-miR-4477b1765069821765069898mer-1a176506968176506989145-12.63
CAediting_1229414chr17_67471546_+ENSG00000113194.11ENST00000261942hsa-miR-548aa1765095931765095997mer-m8176509576176509600150-12.95
CAediting_1351755chr19_40282625_-ENSG00000113194.11ENST00000261942hsa-miR-6411765082171765082237mer-m8176508197176508224149-18.58
CAediting_396018chr5_1062918_-ENSG00000113194.11ENST00000261942hsa-miR-46351765084371765084426mer176508423176508443141-19.69
CAediting_468389chr6_31355314_-ENSG00000113194.11ENST00000261942hsa-miR-6891-5p1765092551765092628mer-1a176509242176509262148-23.61

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1524209chrX_134546392_-ENSG00000113194.11ENST00000261942hsa-miR-503-5p1765079151765079206mer176507899176507921144-17.93
CAediting_1229413chr17_67471544_+ENSG00000113194.11ENST00000261942hsa-miR-548aa1765081981765082036mer176508181176508204140-16.36
CAediting_1229414chr17_67471546_+ENSG00000113194.11ENST00000261942hsa-miR-548aa1765081981765082036mer176508181176508204140-16.36
CAediting_1229415chr17_67471547_+ENSG00000113194.11ENST00000261942hsa-miR-548aa1765081981765082036mer176508181176508204140-16.36
CAediting_1229413chr17_67471544_+ENSG00000113194.11ENST00000261942hsa-miR-548aa1765098821765098887mer-m8176509865176509889140-8.79
CAediting_1229414chr17_67471546_+ENSG00000113194.11ENST00000261942hsa-miR-548aa1765098821765098887mer-m8176509865176509889140-8.79
CAediting_1229415chr17_67471547_+ENSG00000113194.11ENST00000261942hsa-miR-548aa1765098821765098887mer-m8176509865176509889140-8.79
CAediting_524911chr7_5495852_-ENSG00000113194.11ENST00000261942hsa-miR-589-3p1765094771765094837mer-m8176509461176509484150-13.53

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for FAF2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000513627.1retained_intronSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_449839ENST00000513627.1chr5_176496916_+-177.70-176.30-178.20
CAediting_449840ENST00000513627.1chr5_176496961_+-177.10-176.30-178.20
CAediting_449841ENST00000513627.1chr5_176496981_+-176.30-176.30-178.20

Top

Relation with ADAR for FAF2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_449819chr5_176490231_+0.0241427389214390.189182833005793....
ESCACAediting_449820chr5_176490232_+..0.04582412937023930.280942168613494..

Top

Relation with cancer stages for FAF2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
STADpathologic_stageCAediting_449814chr5_176490190_+0.01320215116886170.301365203951726

Top

Relation with survival for FAF2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for FAF2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for FAF2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
FAF2C0033578Prostatic Neoplasms1CTD_human
FAF2C0376358Malignant neoplasm of prostate1CTD_human