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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: CEP68 (CAeditome ID:23177) |
Gene summary for CEP68 |
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Gene information | Gene symbol | CEP68 | Gene ID | 23177 |
Gene name | centrosomal protein 68 | |
Synonyms | KIAA0582 | |
Cytomap | 2p14 | |
Type of gene | protein-coding | |
Description | centrosomal protein of 68 kDacentrosomal protein 68kDa | |
Modification date | 20210518 | |
UniProtAcc | Q76N32 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
CEP68 | GO:0005654 | Centrosomal protein of 68 kDa | 0000052 |
CEP68 | GO:0005813 | Centrosomal protein of 68 kDa | 18042621 |
CEP68 | GO:0005813 | Centrosomal protein of 68 kDa | 21399614 |
CEP68 | GO:0005813 | Centrosomal protein of 68 kDa | 31974111 |
CEP68 | GO:0005829 | Centrosomal protein of 68 kDa | 0000052 |
CEP68 | GO:0030054 | Centrosomal protein of 68 kDa | 0000052 |
CEP68 | GO:0034451 | Centrosomal protein of 68 kDa | 0000052 |
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RNA A-to-I events for CEP68 |
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CAediting_187571(65058619, +), CAediting_187572(65058640, +), CAediting_187573(65061160, +), CAediting_187574(65062434, +), CAediting_187575(65062454, +), CAediting_187576(65069493, +), CAediting_187577(65069494, +), |
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RNA editing positional annotations for CEP68 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_187577 | chr2_65069494_+ | nonsynonymous SNV | ENST00000260569.4 | c.A50G | p.K17R | D | P | N |
CAediting_187577 | chr2_65069494_+ | nonsynonymous SNV | ENST00000377990.5 | c.A50G | p.K17R | D | P | N |
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CAeditome ID | Position | Variant type |
CAediting_187571 | chr2_65058619_+ | ncRNA_intronic |
CAediting_187572 | chr2_65058640_+ | ncRNA_intronic |
CAediting_187573 | chr2_65061160_+ | ncRNA_intronic |
CAediting_187574 | chr2_65062434_+ | ncRNA_intronic |
CAediting_187575 | chr2_65062454_+ | ncRNA_intronic |
CAediting_187576 | chr2_65069493_+ | exonic |
CAediting_187577 | chr2_65069494_+ | exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_187571 | chr2_65058619_+ | SINE | Alu | AluSq2 |
CAediting_187572 | chr2_65058640_+ | SINE | Alu | AluSq2 |
CAediting_187573 | chr2_65061160_+ | SINE | Alu | AluSx1 |
CAediting_187574 | chr2_65062434_+ | SINE | Alu | AluSz |
CAediting_187575 | chr2_65062454_+ | SINE | Alu | AluSz |
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RNA A-to-I editing events in the alternative splicing sites for CEP68 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEP68 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for CEP68 |
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The effects of the RNA editing to the miRNA binding sites for CEP68 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_980496 | chr14_31014685_- | ENSG00000011523.12 | ENST00000377990 | hsa-miR-624-3p | 65085332 | 65085338 | 7mer-m8 | 65085318 | 65085339 | 169 | -20.58 |
CAediting_393 | chr1_1167164_+ | ENSG00000011523.12 | ENST00000377990 | hsa-miR-200b-3p | 65085862 | 65085868 | 7mer-m8 | 65085849 | 65085869 | 157 | -18.68 |
CAediting_980496 | chr14_31014685_- | ENSG00000011523.12 | ENST00000260569 | hsa-miR-624-3p | 65085332 | 65085338 | 7mer-m8 | 65085318 | 65085339 | 169 | -20.58 |
CAediting_393 | chr1_1167164_+ | ENSG00000011523.12 | ENST00000260569 | hsa-miR-200b-3p | 65085862 | 65085868 | 7mer-m8 | 65085849 | 65085869 | 157 | -18.68 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000011523.12 | ENST00000537589 | hsa-miR-548aa | 65074000 | 65074006 | 7mer-m8 | 65073986 | 65074007 | 148 | -9.18 |
CAediting_77128 | chr1_85133844_+ | ENSG00000011523.12 | ENST00000537589 | hsa-miR-4423-3p | 65073198 | 65073204 | 7mer-m8 | 65073185 | 65073205 | 140 | -12.23 |
CAediting_1351755 | chr19_40282625_- | ENSG00000011523.12 | ENST00000537589 | hsa-miR-641 | 65074842 | 65074849 | 8mer-1a | 65074826 | 65074849 | 147 | -12.49 |
CAediting_117844 | chr1_162342605_+ | ENSG00000011523.12 | ENST00000537589 | hsa-miR-556-3p | 65075226 | 65075232 | 7mer-m8 | 65075213 | 65075233 | 150 | -15.13 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000011523.12 | ENST00000377990 | hsa-miR-200b-3p | 65084812 | 65084818 | 7mer-m8 | 65084799 | 65084819 | 152 | -11.93 |
CAediting_396018 | chr5_1062918_- | ENSG00000011523.12 | ENST00000377990 | hsa-miR-4635 | 65083698 | 65083705 | 8mer-1a | 65083685 | 65083705 | 140 | -10.25 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000011523.12 | ENST00000537589 | hsa-miR-548aa | 65074097 | 65074103 | 7mer-m8 | 65074079 | 65074104 | 153 | -12.95 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000011523.12 | ENST00000537589 | hsa-miR-548aa | 65074097 | 65074103 | 7mer-m8 | 65074079 | 65074104 | 153 | -12.95 |
CAediting_117844 | chr1_162342605_+ | ENSG00000011523.12 | ENST00000537589 | hsa-miR-556-3p | 65074403 | 65074409 | 7mer-m8 | 65074389 | 65074410 | 140 | -12.9 |
CAediting_393 | chr1_1167164_+ | ENSG00000011523.12 | ENST00000260569 | hsa-miR-200b-3p | 65084812 | 65084818 | 7mer-m8 | 65084799 | 65084819 | 152 | -11.93 |
CAediting_396018 | chr5_1062918_- | ENSG00000011523.12 | ENST00000260569 | hsa-miR-4635 | 65083698 | 65083705 | 8mer-1a | 65083685 | 65083705 | 140 | -10.25 |
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The effects of the RNA editing to the stability of the RNA structures for CEP68 |
![]() * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000260569.4 | protein_coding | ![]() | ![]() |
ENST00000377990.5 | protein_coding | ![]() | ![]() |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_187576 | ENST00000260569.4 | chr2_65069493_+ | -1709.10 | -1706.50 | -1710.80 |
CAediting_187577 | ENST00000260569.4 | chr2_65069494_+ | -1708.10 | -1706.50 | -1710.80 |
CAediting_187576 | ENST00000377990.5 | chr2_65069493_+ | -1939.40 | -1936.80 | -1939.40 |
CAediting_187577 | ENST00000377990.5 | chr2_65069494_+ | -1936.80 | -1936.80 | -1939.40 |
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Relation with ADAR for CEP68 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for CEP68 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for CEP68 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for CEP68 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CEP68 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
CEP68 | C0004238 | Atrial Fibrillation | 2 | CTD_human |
CEP68 | C0235480 | Paroxysmal atrial fibrillation | 2 | CTD_human |
CEP68 | C2585653 | Persistent atrial fibrillation | 2 | CTD_human |
CEP68 | C3468561 | familial atrial fibrillation | 2 | CTD_human |