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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: FLII (CAeditome ID:2314) |
Gene summary for FLII |
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Gene information | Gene symbol | FLII | Gene ID | 2314 |
Gene name | FLII actin remodeling protein | |
Synonyms | FLI|FLIL|Fli1 | |
Cytomap | 17p11.2 | |
Type of gene | protein-coding | |
Description | protein flightless-1 homologflightless I actin binding proteinflightless I homolog | |
Modification date | 20210524 | |
UniProtAcc | Q13045 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
FLII | GO:0003779 | Protein flightless-1 homolog | 9525888 |
FLII | GO:0005654 | Protein flightless-1 homolog | 0000052 |
FLII | GO:0005829 | Protein flightless-1 homolog | 0000052 |
FLII | GO:0034451 | Protein flightless-1 homolog | 0000052 |
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RNA A-to-I events for FLII |
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CAediting_1167600(18244956, -), CAediting_1167601(18247308, -), |
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RNA editing positional annotations for FLII using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_1167601 | chr17_18247308_- | nonsynonymous SNV | ENST00000327031.7 | c.A2537G | p.Y846C | D | D | D |
CAediting_1167601 | chr17_18247308_- | nonsynonymous SNV | ENST00000545457.5 | c.A2372G | p.Y791C | D | D | D |
CAediting_1167601 | chr17_18247308_- | nonsynonymous SNV | ENST00000579294.4 | c.A2504G | p.Y835C | D | D | D |
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CAeditome ID | Position | Variant type |
CAediting_1167600 | chr17_18244956_- | UTR3 |
CAediting_1167601 | chr17_18247308_- | exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
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RNA A-to-I editing events in the alternative splicing sites for FLII |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FLII |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for FLII |
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The effects of the RNA editing to the miRNA binding sites for FLII |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000581858 | hsa-miR-4713-5p | 18244955 | 18244961 | 7mer-m8 | 18244954 | 18244974 | 143.00 | -19.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000577398 | hsa-miR-4713-5p | 18244955 | 18244961 | 7mer-m8 | 18244954 | 18244974 | 143.00 | -19.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000578558 | hsa-miR-4713-5p | 18244955 | 18244961 | 7mer-m8 | 18244954 | 18244974 | 143.00 | -19.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000545457 | hsa-miR-4713-5p | 18244955 | 18244961 | 7mer-m8 | 18244954 | 18244974 | 143.00 | -19.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-4713-5p | 18244955 | 18244961 | 7mer-m8 | 18244954 | 18244974 | 143.00 | -19.35 |
CAediting_1167601 | chr17_18247308_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-143-5p | 18247304 | 18247311 | 8mer-1a | 18247304 | 18247325 | 148.00 | -15.13 |
CAediting_1167601 | chr17_18247308_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-455-3p | 18247308 | 18247314 | 7mer-m8 | 18247307 | 18247326 | 157.00 | -23.17 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000581858 | hsa-miR-3167 | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 147 | -15.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000581858 | hsa-miR-876-5p | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 144 | -16.93 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000577398 | hsa-miR-3167 | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 147 | -15.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000577398 | hsa-miR-876-5p | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 144 | -16.93 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000578558 | hsa-miR-3167 | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 147 | -15.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000578558 | hsa-miR-876-5p | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 144 | -16.93 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000545457 | hsa-miR-3167 | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 147 | -15.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000545457 | hsa-miR-876-5p | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 144 | -16.93 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-3167 | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 147 | -15.35 |
CAediting_1167600 | chr17_18244956_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-876-5p | 18244951 | 18244958 | 8mer-1a | 18244951 | 18244972 | 144 | -16.93 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_748296 | chr10_51299626_+ | ENSG00000177731.14 | ENST00000581858 | hsa-miR-605-3p | 18244968 | 18244975 | 8mer-1a | 18244968 | 18244990 | 155 | -18.12 |
CAediting_748296 | chr10_51299626_+ | ENSG00000177731.14 | ENST00000577398 | hsa-miR-605-3p | 18244968 | 18244975 | 8mer-1a | 18244968 | 18244990 | 155 | -18.12 |
CAediting_748296 | chr10_51299626_+ | ENSG00000177731.14 | ENST00000578558 | hsa-miR-605-3p | 18244968 | 18244975 | 8mer-1a | 18244968 | 18244990 | 155 | -18.12 |
CAediting_748296 | chr10_51299626_+ | ENSG00000177731.14 | ENST00000545457 | hsa-miR-605-3p | 18244968 | 18244975 | 8mer-1a | 18244968 | 18244990 | 155 | -18.12 |
CAediting_846604 | chr11_93733708_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-1304-3p | 18254615 | 18254622 | 8mer-1a | 18254615 | 18254636 | 144 | -18.68 |
CAediting_748296 | chr10_51299626_+ | ENSG00000177731.14 | ENST00000578101 | hsa-miR-605-3p | 18253381 | 18253388 | 8mer-1a | 18253381 | 18253404 | 146 | -16.71 |
CAediting_688080 | chr9_63819626_+ | ENSG00000177731.14 | ENST00000578101 | hsa-miR-4477b | 18246187 | 18246193 | 7mer-m8 | 18246186 | 18246206 | 146 | -13.18 |
CAediting_688080 | chr9_63819626_+ | ENSG00000177731.14 | ENST00000578101 | hsa-miR-4477b | 18246163 | 18246169 | 7mer-m8 | 18246162 | 18246183 | 140 | -9.21 |
CAediting_748296 | chr10_51299626_+ | ENSG00000177731.14 | ENST00000578101 | hsa-miR-605-3p | 18244968 | 18244975 | 8mer-1a | 18244968 | 18244990 | 155 | -18.12 |
CAediting_748296 | chr10_51299626_+ | ENSG00000177731.14 | ENST00000577626 | hsa-miR-605-3p | 18253381 | 18253388 | 8mer-1a | 18253381 | 18253404 | 146 | -16.71 |
CAediting_396018 | chr5_1062918_- | ENSG00000177731.14 | ENST00000581858 | hsa-miR-4635 | 18245004 | 18245010 | 7mer-m8 | 18245003 | 18245023 | 143 | -11.63 |
CAediting_396018 | chr5_1062918_- | ENSG00000177731.14 | ENST00000577398 | hsa-miR-4635 | 18245004 | 18245010 | 7mer-m8 | 18245003 | 18245023 | 143 | -11.63 |
CAediting_396018 | chr5_1062918_- | ENSG00000177731.14 | ENST00000578558 | hsa-miR-4635 | 18245004 | 18245010 | 7mer-m8 | 18245003 | 18245023 | 143 | -11.63 |
CAediting_396018 | chr5_1062918_- | ENSG00000177731.14 | ENST00000545457 | hsa-miR-4635 | 18245004 | 18245010 | 7mer-m8 | 18245003 | 18245023 | 143 | -11.63 |
CAediting_604450 | chr7_133034877_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-3654 | 18256541 | 18256547 | 7mer-m8 | 18256540 | 18256557 | 151 | -22.05 |
CAediting_1368054 | chr19_46709310_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-320e | 18254658 | 18254664 | 7mer-m8 | 18254657 | 18254674 | 151 | -18.62 |
CAediting_228905 | chr2_188297554_+ | ENSG00000177731.14 | ENST00000578101 | hsa-miR-561-3p | 18253578 | 18253584 | 7mer-m8 | 18253577 | 18253598 | 140 | -13.88 |
CAediting_524911 | chr7_5495852_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-589-3p | 18250930 | 18250936 | 7mer-m8 | 18250929 | 18250952 | 145 | -13.63 |
CAediting_396018 | chr5_1062918_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-4635 | 18249147 | 18249153 | 7mer-m8 | 18249146 | 18249166 | 140 | -18.63 |
CAediting_396018 | chr5_1062918_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-4635 | 18247738 | 18247744 | 7mer-m8 | 18247737 | 18247758 | 154 | -19.55 |
CAediting_396018 | chr5_1062918_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-4635 | 18246162 | 18246168 | 7mer-m8 | 18246162 | 18246186 | 152 | -20.7 |
CAediting_396018 | chr5_1062918_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-4635 | 18245004 | 18245010 | 7mer-m8 | 18245003 | 18245023 | 143 | -11.63 |
CAediting_228905 | chr2_188297554_+ | ENSG00000177731.14 | ENST00000581401 | hsa-miR-561-3p | 18253578 | 18253584 | 7mer-m8 | 18253577 | 18253598 | 140 | -13.88 |
CAediting_1524209 | chrX_134546392_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-503-5p | 18247747 | 18247753 | 7mer-m8 | 18247746 | 18247769 | 151 | -25.09 |
CAediting_468389 | chr6_31355314_- | ENSG00000177731.14 | ENST00000578101 | hsa-miR-6891-5p | 18246188 | 18246195 | 8mer-1a | 18246188 | 18246207 | 144 | -23.85 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for FLII |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for FLII |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for FLII |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for FLII |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for FLII |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FLII |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
FLII | C0795864 | Smith-Magenis syndrome | 3 | ORPHANET |