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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SWAP70 (CAeditome ID:23075)

Gene summary for SWAP70

check button Gene summary
Gene informationGene symbol

SWAP70

Gene ID

23075

Gene nameswitching B cell complex subunit SWAP70
SynonymsHSPC321|SWAP-70
Cytomap

11p15.4

Type of geneprotein-coding
Descriptionswitch-associated protein 70SWAP switching B-cell complex 70kDa subunitSWAP switching B-cell complex subunit 70
Modification date20210518
UniProtAcc

Q9UH65

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
SWAP70

GO:0005737

Switch-associated protein 70

25468996

SWAP70

GO:0005886

Switch-associated protein 70

0000052

SWAP70

GO:0015629

Switch-associated protein 70

0000052


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RNA A-to-I events for SWAP70

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000133789.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_797617(9674518, +), CAediting_797618(9674848, +), CAediting_797619(9675167, +), CAediting_797620(9675173, +), CAediting_797621(9675194, +), CAediting_797622(9675207, +), CAediting_797623(9683145, +), CAediting_797624(9683235, +), CAediting_797625(9683237, +), CAediting_797626(9683244, +), CAediting_797627(9683246, +), CAediting_797628(9683247, +), CAediting_797629(9683251, +), CAediting_797630(9683262, +), CAediting_797631(9683267, +), CAediting_797632(9683336, +), CAediting_797633(9683400, +), CAediting_797634(9683403, +), CAediting_797635(9683426, +), CAediting_797636(9690632, +), CAediting_797637(9695864, +), CAediting_797638(9695944, +), CAediting_797639(9696950, +), CAediting_797640(9696956, +), CAediting_797641(9696984, +), CAediting_797642(9697030, +), CAediting_797643(9699106, +), CAediting_797644(9699673, +), CAediting_797645(9699702, +), CAediting_797646(9699705, +), CAediting_797647(9699706, +), CAediting_797648(9699795, +), CAediting_797649(9701266, +), CAediting_797650(9701554, +), CAediting_797651(9702512, +), CAediting_797652(9702579, +), CAediting_797653(9702655, +), CAediting_797654(9702656, +), CAediting_797655(9702930, +), CAediting_797656(9702969, +), CAediting_797657(9704139, +), CAediting_797658(9704628, +), CAediting_797659(9708340, +), CAediting_797660(9708341, +), CAediting_797661(9709709, +), CAediting_797662(9712466, +), CAediting_797663(9712471, +), CAediting_797664(9712478, +), CAediting_797665(9712479, +), CAediting_797666(9712484, +), CAediting_797667(9712540, +), CAediting_797668(9712567, +), CAediting_797669(9718904, +), CAediting_797670(9718916, +), CAediting_797671(9718944, +), CAediting_797672(9718969, +), CAediting_797673(9718979, +), CAediting_797674(9719064, +), CAediting_797675(9719143, +), CAediting_797676(9719229, +), CAediting_797677(9719405, +), CAediting_797678(9725225, +), CAediting_797679(9725752, +), CAediting_797680(9725781, +), CAediting_797681(9725784, +), CAediting_797682(9725832, +), CAediting_797683(9734885, +), CAediting_797684(9741871, +), CAediting_797685(9741894, +), CAediting_797686(9741914, +), CAediting_797687(9741918, +), CAediting_797688(9741927, +), CAediting_797689(9741976, +), CAediting_797690(9741980, +), CAediting_797691(9741983, +), CAediting_797692(9741986, +), CAediting_797693(9741989, +), CAediting_797694(9741994, +), CAediting_797695(9741999, +), CAediting_797696(9742002, +), CAediting_797697(9742015, +), CAediting_797698(9742056, +), CAediting_797699(9742059, +), CAediting_797700(9742357, +), CAediting_797701(9742436, +), CAediting_797702(9742441, +), CAediting_797703(9742454, +), CAediting_797704(9742520, +), CAediting_797705(9742597, +), CAediting_797706(9744092, +), CAediting_797707(9744788, +), CAediting_797708(9750074, +), CAediting_797709(9750082, +), CAediting_797710(9750083, +), CAediting_797711(9750088, +), CAediting_797712(9750151, +), CAediting_797713(9750152, +), CAediting_797714(9750160, +), CAediting_797715(9750161, +), CAediting_797716(9750162, +), CAediting_797717(9750176, +), CAediting_797718(9750189, +), CAediting_797719(9750191, +), CAediting_797720(9750194, +), CAediting_797721(9750220, +), CAediting_797722(9750221, +), CAediting_797723(9750226, +), CAediting_797724(9750230, +), CAediting_797725(9750256, +), CAediting_797726(9750262, +), CAediting_797727(9750269, +), CAediting_797728(9750275, +), CAediting_797729(9750282, +), CAediting_797730(9750286, +), CAediting_797731(9750293, +), CAediting_797732(9750296, +), CAediting_797733(9750311, +), CAediting_797734(9750320, +),

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RNA editing positional annotations for SWAP70 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_797617chr11_9674518_+ncRNA_intronic
CAediting_797618chr11_9674848_+ncRNA_intronic
CAediting_797619chr11_9675167_+ncRNA_intronic
CAediting_797620chr11_9675173_+ncRNA_intronic
CAediting_797621chr11_9675194_+ncRNA_intronic
CAediting_797622chr11_9675207_+ncRNA_intronic
CAediting_797623chr11_9683145_+ncRNA_intronic
CAediting_797624chr11_9683235_+ncRNA_intronic
CAediting_797625chr11_9683237_+ncRNA_intronic
CAediting_797626chr11_9683244_+ncRNA_intronic
CAediting_797627chr11_9683246_+ncRNA_intronic
CAediting_797628chr11_9683247_+ncRNA_intronic
CAediting_797629chr11_9683251_+ncRNA_intronic
CAediting_797630chr11_9683262_+ncRNA_intronic
CAediting_797631chr11_9683267_+ncRNA_intronic
CAediting_797632chr11_9683336_+ncRNA_intronic
CAediting_797633chr11_9683400_+ncRNA_intronic
CAediting_797634chr11_9683403_+ncRNA_intronic
CAediting_797635chr11_9683426_+ncRNA_intronic
CAediting_797636chr11_9690632_+ncRNA_intronic
CAediting_797637chr11_9695864_+ncRNA_intronic
CAediting_797638chr11_9695944_+ncRNA_intronic
CAediting_797639chr11_9696950_+ncRNA_intronic
CAediting_797640chr11_9696956_+ncRNA_intronic
CAediting_797641chr11_9696984_+ncRNA_intronic
CAediting_797642chr11_9697030_+ncRNA_intronic
CAediting_797643chr11_9699106_+ncRNA_intronic
CAediting_797644chr11_9699673_+ncRNA_intronic
CAediting_797645chr11_9699702_+ncRNA_intronic
CAediting_797646chr11_9699705_+ncRNA_intronic
CAediting_797647chr11_9699706_+ncRNA_intronic
CAediting_797648chr11_9699795_+ncRNA_intronic
CAediting_797649chr11_9701266_+ncRNA_intronic
CAediting_797650chr11_9701554_+ncRNA_intronic
CAediting_797651chr11_9702512_+ncRNA_intronic
CAediting_797652chr11_9702579_+ncRNA_intronic
CAediting_797653chr11_9702655_+ncRNA_intronic
CAediting_797654chr11_9702656_+ncRNA_intronic
CAediting_797655chr11_9702930_+ncRNA_intronic
CAediting_797656chr11_9702969_+ncRNA_intronic
CAediting_797657chr11_9704139_+ncRNA_intronic
CAediting_797658chr11_9704628_+ncRNA_intronic
CAediting_797659chr11_9708340_+ncRNA_intronic
CAediting_797660chr11_9708341_+ncRNA_intronic
CAediting_797661chr11_9709709_+ncRNA_intronic
CAediting_797662chr11_9712466_+ncRNA_intronic
CAediting_797663chr11_9712471_+ncRNA_intronic
CAediting_797664chr11_9712478_+ncRNA_intronic
CAediting_797665chr11_9712479_+ncRNA_intronic
CAediting_797666chr11_9712484_+ncRNA_intronic
CAediting_797667chr11_9712540_+ncRNA_intronic
CAediting_797668chr11_9712567_+ncRNA_intronic
CAediting_797669chr11_9718904_+ncRNA_intronic
CAediting_797670chr11_9718916_+ncRNA_intronic
CAediting_797671chr11_9718944_+ncRNA_intronic
CAediting_797672chr11_9718969_+ncRNA_intronic
CAediting_797673chr11_9718979_+ncRNA_intronic
CAediting_797674chr11_9719064_+ncRNA_intronic
CAediting_797675chr11_9719143_+ncRNA_intronic
CAediting_797676chr11_9719229_+ncRNA_intronic
CAediting_797677chr11_9719405_+ncRNA_intronic
CAediting_797678chr11_9725225_+ncRNA_intronic
CAediting_797679chr11_9725752_+ncRNA_intronic
CAediting_797680chr11_9725781_+ncRNA_intronic
CAediting_797681chr11_9725784_+ncRNA_intronic
CAediting_797682chr11_9725832_+ncRNA_intronic
CAediting_797683chr11_9734885_+ncRNA_intronic
CAediting_797684chr11_9741871_+ncRNA_exonic
CAediting_797685chr11_9741894_+ncRNA_exonic
CAediting_797686chr11_9741914_+ncRNA_exonic
CAediting_797687chr11_9741918_+ncRNA_exonic
CAediting_797688chr11_9741927_+ncRNA_exonic
CAediting_797689chr11_9741976_+intronic
CAediting_797690chr11_9741980_+intronic
CAediting_797691chr11_9741983_+intronic
CAediting_797692chr11_9741986_+intronic
CAediting_797693chr11_9741989_+intronic
CAediting_797694chr11_9741994_+intronic
CAediting_797695chr11_9741999_+intronic
CAediting_797696chr11_9742002_+intronic
CAediting_797697chr11_9742015_+intronic
CAediting_797698chr11_9742056_+intronic
CAediting_797699chr11_9742059_+intronic
CAediting_797700chr11_9742357_+intronic
CAediting_797701chr11_9742436_+intronic
CAediting_797702chr11_9742441_+intronic
CAediting_797703chr11_9742454_+intronic
CAediting_797704chr11_9742520_+intronic
CAediting_797705chr11_9742597_+intronic
CAediting_797706chr11_9744092_+intronic
CAediting_797707chr11_9744788_+intronic
CAediting_797708chr11_9750074_+UTR3
CAediting_797709chr11_9750082_+UTR3
CAediting_797710chr11_9750083_+UTR3
CAediting_797711chr11_9750088_+UTR3
CAediting_797712chr11_9750151_+UTR3
CAediting_797713chr11_9750152_+UTR3
CAediting_797714chr11_9750160_+UTR3
CAediting_797715chr11_9750161_+UTR3
CAediting_797716chr11_9750162_+UTR3
CAediting_797717chr11_9750176_+UTR3
CAediting_797718chr11_9750189_+UTR3
CAediting_797719chr11_9750191_+UTR3
CAediting_797720chr11_9750194_+UTR3
CAediting_797721chr11_9750220_+UTR3
CAediting_797722chr11_9750221_+UTR3
CAediting_797723chr11_9750226_+UTR3
CAediting_797724chr11_9750230_+UTR3
CAediting_797725chr11_9750256_+UTR3
CAediting_797726chr11_9750262_+UTR3
CAediting_797727chr11_9750269_+UTR3
CAediting_797728chr11_9750275_+UTR3
CAediting_797729chr11_9750282_+splicing
CAediting_797730chr11_9750286_+UTR3
CAediting_797731chr11_9750293_+UTR3
CAediting_797732chr11_9750296_+UTR3
CAediting_797733chr11_9750311_+UTR3
CAediting_797734chr11_9750320_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_797617chr11_9674518_+SINEAluAluJr4
CAediting_797618chr11_9674848_+SINEAluAluY
CAediting_797619chr11_9675167_+SINEAluAluJo
CAediting_797620chr11_9675173_+SINEAluAluJo
CAediting_797621chr11_9675194_+SINEAluAluJo
CAediting_797622chr11_9675207_+SINEAluAluJo
CAediting_797623chr11_9683145_+SINEAluAluJb
CAediting_797624chr11_9683235_+SINEAluAluJb
CAediting_797625chr11_9683237_+SINEAluAluJb
CAediting_797626chr11_9683244_+SINEAluAluJb
CAediting_797627chr11_9683246_+SINEAluAluJb
CAediting_797628chr11_9683247_+SINEAluAluJb
CAediting_797629chr11_9683251_+SINEAluAluJb
CAediting_797630chr11_9683262_+SINEAluAluJb
CAediting_797631chr11_9683267_+SINEAluAluJb
CAediting_797632chr11_9683336_+SINEAluAluJb
CAediting_797633chr11_9683400_+SINEAluAluJb
CAediting_797634chr11_9683403_+SINEAluAluJb
CAediting_797635chr11_9683426_+SINEAluAluJb
CAediting_797636chr11_9690632_+SINEAluAluJo
CAediting_797637chr11_9695864_+SINEAluAluJb
CAediting_797638chr11_9695944_+SINEAluAluJb
CAediting_797639chr11_9696950_+SINEAluFLAM_C
CAediting_797640chr11_9696956_+SINEAluFLAM_C
CAediting_797641chr11_9696984_+SINEAluFLAM_C
CAediting_797642chr11_9697030_+SINEAluFLAM_C
CAediting_797643chr11_9699106_+LINEL1L1MB7
CAediting_797644chr11_9699673_+SINEAluAluJr4
CAediting_797645chr11_9699702_+SINEAluAluJr4
CAediting_797646chr11_9699705_+SINEAluAluJr4
CAediting_797647chr11_9699706_+SINEAluAluJr4
CAediting_797648chr11_9699795_+SINEAluAluJr4
CAediting_797649chr11_9701266_+SINEAluAluSq10
CAediting_797650chr11_9701554_+SINEAluFLAM_C
CAediting_797651chr11_9702512_+SINEAluAluJb
CAediting_797652chr11_9702579_+SINEAluAluJb
CAediting_797653chr11_9702655_+SINEAluAluJb
CAediting_797654chr11_9702656_+SINEAluAluJb
CAediting_797655chr11_9702930_+LINEL1L1MB7
CAediting_797656chr11_9702969_+LINEL1L1MB7
CAediting_797658chr11_9704628_+SINEAluAluSz
CAediting_797659chr11_9708340_+LINEL1L1MB1
CAediting_797660chr11_9708341_+LINEL1L1MB1
CAediting_797661chr11_9709709_+SINEAluAluSz
CAediting_797662chr11_9712466_+SINEAluAluJr
CAediting_797663chr11_9712471_+SINEAluAluJr
CAediting_797664chr11_9712478_+SINEAluAluJr
CAediting_797665chr11_9712479_+SINEAluAluJr
CAediting_797666chr11_9712484_+SINEAluAluJr
CAediting_797669chr11_9718904_+SINEAluAluJb
CAediting_797670chr11_9718916_+SINEAluAluJb
CAediting_797671chr11_9718944_+SINEAluAluJb
CAediting_797672chr11_9718969_+SINEAluAluJb
CAediting_797673chr11_9718979_+SINEAluAluJb
CAediting_797674chr11_9719064_+SINEAluAluJb
CAediting_797675chr11_9719143_+SINEAluAluJb
CAediting_797676chr11_9719229_+SINEAluAluJb
CAediting_797677chr11_9719405_+SINEAluAluSx
CAediting_797678chr11_9725225_+SINEAluAluSz
CAediting_797679chr11_9725752_+SINEAluAluSc
CAediting_797680chr11_9725781_+SINEAluAluSc
CAediting_797681chr11_9725784_+SINEAluAluSc
CAediting_797682chr11_9725832_+SINEAluAluSc
CAediting_797683chr11_9734885_+SINEAluAluJo
CAediting_797684chr11_9741871_+SINEAluAluJb
CAediting_797685chr11_9741894_+SINEAluAluJb
CAediting_797686chr11_9741914_+SINEAluAluJb
CAediting_797687chr11_9741918_+SINEAluAluJb
CAediting_797688chr11_9741927_+SINEAluAluJb
CAediting_797689chr11_9741976_+SINEAluAluJb
CAediting_797690chr11_9741980_+SINEAluAluJb
CAediting_797691chr11_9741983_+SINEAluAluJb
CAediting_797692chr11_9741986_+SINEAluAluJb
CAediting_797693chr11_9741989_+SINEAluAluJb
CAediting_797694chr11_9741994_+SINEAluAluJb
CAediting_797695chr11_9741999_+SINEAluAluJb
CAediting_797696chr11_9742002_+SINEAluAluJb
CAediting_797697chr11_9742015_+SINEAluAluJb
CAediting_797698chr11_9742056_+SINEAluAluJb
CAediting_797699chr11_9742059_+SINEAluAluJb
CAediting_797700chr11_9742357_+SINEAluAluSc
CAediting_797701chr11_9742436_+SINEAluAluSc
CAediting_797702chr11_9742441_+SINEAluAluSc
CAediting_797703chr11_9742454_+SINEAluAluSc
CAediting_797704chr11_9742520_+SINEAluAluSc
CAediting_797705chr11_9742597_+SINEAluAluSc
CAediting_797706chr11_9744092_+SINEAluAluYm1
CAediting_797707chr11_9744788_+SINEAluAluSz
CAediting_797708chr11_9750074_+SINEAluAluSx1
CAediting_797709chr11_9750082_+SINEAluAluSx1
CAediting_797710chr11_9750083_+SINEAluAluSx1
CAediting_797711chr11_9750088_+SINEAluAluSx1
CAediting_797712chr11_9750151_+SINEAluAluSx1
CAediting_797713chr11_9750152_+SINEAluAluSx1
CAediting_797714chr11_9750160_+SINEAluAluSx1
CAediting_797715chr11_9750161_+SINEAluAluSx1
CAediting_797716chr11_9750162_+SINEAluAluSx1
CAediting_797717chr11_9750176_+SINEAluAluSx1
CAediting_797718chr11_9750189_+SINEAluAluSx1
CAediting_797719chr11_9750191_+SINEAluAluSx1
CAediting_797720chr11_9750194_+SINEAluAluSx1
CAediting_797721chr11_9750220_+SINEAluAluSx1
CAediting_797722chr11_9750221_+SINEAluAluSx1
CAediting_797723chr11_9750226_+SINEAluAluSx1
CAediting_797724chr11_9750230_+SINEAluAluSx1
CAediting_797725chr11_9750256_+SINEAluAluSx1
CAediting_797726chr11_9750262_+SINEAluAluSx1
CAediting_797727chr11_9750269_+SINEAluAluSx1
CAediting_797728chr11_9750275_+SINEAluAluSx1
CAediting_797729chr11_9750282_+SINEAluAluSx1
CAediting_797730chr11_9750286_+SINEAluAluSx1
CAediting_797731chr11_9750293_+SINEAluAluSx1
CAediting_797732chr11_9750296_+SINEAluAluSx1
CAediting_797733chr11_9750311_+SINEAluAluSx1
CAediting_797734chr11_9750320_+SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for SWAP70

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_797723chr11_9750226_+9750224:97502463SS0+18iCCAGCTACTTGGGAGGCTGAGGC-21.17CCGGCTACTTGGGAGGCTGAGGC-20.42
IRCAediting_797724chr11_9750230_+9750224:97502463SS0+14iCCAGCTACTTGGGAGGCTGAGGC-21.17CCAGCTGCTTGGGAGGCTGAGGC-20.2

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000133789.13.SWAP70.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000133789.13.SWAP70.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SWAP70

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SWAP70

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SWAP70

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_797720chr11_9750194_+ENSG00000133789.13ENST00000447399hsa-miR-3157-5p975019297501987mer-m897501789750199141.00-15.65
CAediting_797708chr11_9750074_+ENSG00000133789.13ENST00000447399hsa-miR-4634975007197500777mer-m897500599750078151.00-24.10
CAediting_797709chr11_9750082_+ENSG00000133789.13ENST00000447399hsa-miR-513a-5p975007697500827mer-m897500669750083144.00-16.68
CAediting_797709chr11_9750082_+ENSG00000133789.13ENST00000447399hsa-miR-513a-5p975007697500827mer-m897500669750083144.00-16.68
CAediting_797709chr11_9750082_+ENSG00000133789.13ENST00000447399hsa-miR-638975008197500877mer-1a97500639750087159.00-35.77
CAediting_797710chr11_9750083_+ENSG00000133789.13ENST00000447399hsa-miR-8052975008197500877mer-1a97500699750087140.00-24.15
CAediting_797711chr11_9750088_+ENSG00000133789.13ENST00000447399hsa-miR-371a-3p975008697500927mer-m897500719750093145.00-17.36
CAediting_797713chr11_9750152_+ENSG00000133789.13ENST00000447399hsa-miR-3190-5p975014597501517mer-m897501339750152149.00-18.00
CAediting_797716chr11_9750162_+ENSG00000133789.13ENST00000447399hsa-miR-3158-3p975015997501657mer-m897501459750166148.00-18.55
CAediting_797716chr11_9750162_+ENSG00000133789.13ENST00000447399hsa-miR-3158-3p975015997501657mer-m897501459750166148.00-18.55
CAediting_797716chr11_9750162_+ENSG00000133789.13ENST00000447399hsa-miR-6754-3p975015597501617mer-m897501429750162146.00-15.40
CAediting_797716chr11_9750162_+ENSG00000133789.13ENST00000447399hsa-miR-6837-3p975015697501616mer97501379750162140.00-18.90
CAediting_797717chr11_9750176_+ENSG00000133789.13ENST00000447399hsa-miR-222-5p975017097501778mer-1a97501549750177146.00-14.38
CAediting_797717chr11_9750176_+ENSG00000133789.13ENST00000447399hsa-miR-30a-3p975017297501798mer-1a97501559750179150.00-10.49
CAediting_797717chr11_9750176_+ENSG00000133789.13ENST00000447399hsa-miR-30d-3p975017297501798mer-1a97501549750179147.00-10.55
CAediting_797717chr11_9750176_+ENSG00000133789.13ENST00000447399hsa-miR-30e-3p975017297501798mer-1a97501559750179150.00-11.75
CAediting_797717chr11_9750176_+ENSG00000133789.13ENST00000447399hsa-miR-936975016997501768mer-1a97501549750176159.00-26.12
CAediting_797721chr11_9750220_+ENSG00000133789.13ENST00000447399hsa-miR-513a-5p975021497502207mer-m897502049750221140.00-18.01
CAediting_797721chr11_9750220_+ENSG00000133789.13ENST00000447399hsa-miR-513a-5p975021497502207mer-m897502049750221140.00-18.01
CAediting_797721chr11_9750220_+ENSG00000133789.13ENST00000447399hsa-miR-638975021997502257mer-1a97502019750225155.00-34.54
CAediting_797722chr11_9750221_+ENSG00000133789.13ENST00000447399hsa-miR-8052975021997502257mer-1a97502059750225141.00-23.11
CAediting_797724chr11_9750230_+ENSG00000133789.13ENST00000447399hsa-miR-1207-3p975022397502297mer-m897502139750230140.00-12.56
CAediting_797724chr11_9750230_+ENSG00000133789.13ENST00000447399hsa-miR-646975022597502317mer-m897502149750232145.00-16.24
CAediting_797732chr11_9750296_+ENSG00000133789.13ENST00000447399hsa-miR-564975029497502996mer97502829750300151.00-25.07
CAediting_797714chr11_9750160_+ENSG00000133789.13ENST00000447399hsa-miR-23a-5p975015897501647mer-m897501439750165152.00-22.78
CAediting_797714chr11_9750160_+ENSG00000133789.13ENST00000447399hsa-miR-23b-5p975015897501647mer-m897501459750165148.00-16.96
CAediting_797715chr11_9750161_+ENSG00000133789.13ENST00000447399hsa-miR-1182975015997501657mer-m897501449750166151.00-18.92
CAediting_797715chr11_9750161_+ENSG00000133789.13ENST00000447399hsa-miR-1229-3p975015597501617mer-m897501389750162146.00-17.08
CAediting_797715chr11_9750161_+ENSG00000133789.13ENST00000447399hsa-miR-6511a-3p975015497501618mer-1a97501409750161140.00-14.16
CAediting_797715chr11_9750161_+ENSG00000133789.13ENST00000447399hsa-miR-6511a-3p975015497501618mer-1a97501409750161140.00-14.16
CAediting_797715chr11_9750161_+ENSG00000133789.13ENST00000447399hsa-miR-6511a-3p975015497501618mer-1a97501409750161140.00-14.16
CAediting_797715chr11_9750161_+ENSG00000133789.13ENST00000447399hsa-miR-6511a-3p975015497501618mer-1a97501409750161140.00-14.16
CAediting_797715chr11_9750161_+ENSG00000133789.13ENST00000447399hsa-miR-6511b-3p975015497501618mer-1a97501399750161140.00-16.93
CAediting_797715chr11_9750161_+ENSG00000133789.13ENST00000447399hsa-miR-6511b-3p975015497501618mer-1a97501399750161140.00-16.93
CAediting_797726chr11_9750262_+ENSG00000133789.13ENST00000447399hsa-miR-574-3p975025897502647mer-m897502449750265142.00-16.61

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_797709chr11_9750082_+ENSG00000133789.13ENST00000447399hsa-miR-10399-5p975007797500837mer-m897500639750084144-10.39
CAediting_797710chr11_9750083_+ENSG00000133789.13ENST00000447399hsa-miR-10399-5p975007797500837mer-m897500639750084144-10.39
CAediting_797721chr11_9750220_+ENSG00000133789.13ENST00000447399hsa-miR-10399-5p975021597502217mer-m897502039750222141-12.5
CAediting_797722chr11_9750221_+ENSG00000133789.13ENST00000447399hsa-miR-10399-5p975021597502217mer-m897502039750222141-12.5
CAediting_797727chr11_9750269_+ENSG00000133789.13ENST00000447399hsa-miR-1281975026697502727mer-m897502579750273147-17.71
CAediting_797733chr11_9750311_+ENSG00000133789.13ENST00000447399hsa-miR-3135b975030697503127mer-m897502919750313149-23.35
CAediting_797733chr11_9750311_+ENSG00000133789.13ENST00000447399hsa-miR-320e975030897503147mer-m897502989750315147-14.17
CAediting_797734chr11_9750320_+ENSG00000133789.13ENST00000447399hsa-miR-367-5p975031797503248mer-1a97503029750324148-12.83
CAediting_797732chr11_9750296_+ENSG00000133789.13ENST00000447399hsa-miR-4304975029497503007mer-m897502839750301147-18.3
CAediting_797712chr11_9750151_+ENSG00000133789.13ENST00000447399hsa-miR-4435975014497501518mer-1a97501319750151146-18.22
CAediting_797712chr11_9750151_+ENSG00000133789.13ENST00000447399hsa-miR-4435975014497501518mer-1a97501319750151146-18.22
CAediting_797719chr11_9750191_+ENSG00000133789.13ENST00000447399hsa-miR-4735-5p975018897501947mer-m897501749750195140-4.28
CAediting_797720chr11_9750194_+ENSG00000133789.13ENST00000447399hsa-miR-4735-5p975018897501947mer-m897501749750195140-4.28
CAediting_797718chr11_9750189_+ENSG00000133789.13ENST00000447399hsa-miR-4775975018797501937mer-m897501739750194154-5.78
CAediting_797719chr11_9750191_+ENSG00000133789.13ENST00000447399hsa-miR-4775975018797501937mer-m897501739750194154-5.78
CAediting_797720chr11_9750194_+ENSG00000133789.13ENST00000447399hsa-miR-4775975018797501937mer-m897501739750194154-5.78
CAediting_797710chr11_9750083_+ENSG00000133789.13ENST00000447399hsa-miR-5089-5p975008197500877mer-m897500669750088148-14.13
CAediting_797711chr11_9750088_+ENSG00000133789.13ENST00000447399hsa-miR-5089-5p975008197500877mer-m897500669750088148-14.13
CAediting_797722chr11_9750221_+ENSG00000133789.13ENST00000447399hsa-miR-5089-5p975021997502257mer-m897502069750226144-13.27
CAediting_797723chr11_9750226_+ENSG00000133789.13ENST00000447399hsa-miR-5089-5p975021997502257mer-m897502069750226144-13.27
CAediting_797711chr11_9750088_+ENSG00000133789.13ENST00000447399hsa-miR-512-3p975008697500927mer-m897500729750093149-15.51
CAediting_797711chr11_9750088_+ENSG00000133789.13ENST00000447399hsa-miR-512-3p975008697500927mer-m897500729750093149-15.51
CAediting_797727chr11_9750269_+ENSG00000133789.13ENST00000447399hsa-miR-532-3p975026397502697mer-m897502489750270154-22.48
CAediting_797724chr11_9750230_+ENSG00000133789.13ENST00000447399hsa-miR-562975022697502327mer-m897502149750233150-12.74
CAediting_797724chr11_9750230_+ENSG00000133789.13ENST00000447399hsa-miR-5697975022797502337mer-m897502129750234149-18.32
CAediting_797729chr11_9750282_+ENSG00000133789.13ENST00000447399hsa-miR-639975027997502857mer-m897502649750286146-22.04
CAediting_797730chr11_9750286_+ENSG00000133789.13ENST00000447399hsa-miR-639975027997502857mer-m897502649750286146-22.04
CAediting_797709chr11_9750082_+ENSG00000133789.13ENST00000447399hsa-miR-6504-3p975007797500837mer-m897500639750084148-14.48
CAediting_797710chr11_9750083_+ENSG00000133789.13ENST00000447399hsa-miR-6504-3p975007797500837mer-m897500639750084148-14.48
CAediting_797721chr11_9750220_+ENSG00000133789.13ENST00000447399hsa-miR-6504-3p975021597502217mer-m897502019750222148-14.75
CAediting_797722chr11_9750221_+ENSG00000133789.13ENST00000447399hsa-miR-6504-3p975021597502217mer-m897502019750222148-14.75
CAediting_797711chr11_9750088_+ENSG00000133789.13ENST00000447399hsa-miR-6506-5p975008297500887mer-m897500679750089144-13.78
CAediting_797723chr11_9750226_+ENSG00000133789.13ENST00000447399hsa-miR-6506-5p975022097502267mer-m897502059750227144-15.62
CAediting_797727chr11_9750269_+ENSG00000133789.13ENST00000447399hsa-miR-6778-3p975026597502717mer-m897502549750272151-18.25
CAediting_797708chr11_9750074_+ENSG00000133789.13ENST00000447399hsa-miR-6807-5p975006797500737mer-m897500539750074140-20.1
CAediting_797716chr11_9750162_+ENSG00000133789.13ENST00000447399hsa-miR-6823-5p975016097501667mer-m897501479750167151-20.84
CAediting_797709chr11_9750082_+ENSG00000133789.13ENST00000447399hsa-miR-7151-3p975007597500828mer-1a97500629750082144-16.51
CAediting_797721chr11_9750220_+ENSG00000133789.13ENST00000447399hsa-miR-7151-3p975021397502208mer-1a97502009750220140-12.68
CAediting_797734chr11_9750320_+ENSG00000133789.13ENST00000447399hsa-miR-744-3p975031697503227mer-m897503049750323145-14.79
CAediting_797725chr11_9750256_+ENSG00000133789.13ENST00000447399hsa-miR-8062975025197502577mer-m897502389750258141-10.43
CAediting_797733chr11_9750311_+ENSG00000133789.13ENST00000534562hsa-miR-3135b975030697503127mer-m897502919750313149-23.35
CAediting_797733chr11_9750311_+ENSG00000133789.13ENST00000534562hsa-miR-320e975030897503147mer-m897502989750315147-14.17
CAediting_797734chr11_9750320_+ENSG00000133789.13ENST00000534562hsa-miR-367-5p975031797503248mer-1a97503029750324148-12.83
CAediting_797734chr11_9750320_+ENSG00000133789.13ENST00000534562hsa-miR-744-3p975031697503227mer-m897503049750323145-14.79

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000133789.13ENST00000447399hsa-miR-1304-3p975028097502867mer-m897502669750287167-30.9
CAediting_980496chr14_31014685_-ENSG00000133789.13ENST00000447399hsa-miR-624-3p975016197501677mer-m897501489750168147-13.91
CAediting_688081chr9_63819627_+ENSG00000133789.13ENST00000447399hsa-miR-4477b975088797508937mer-m897508739750894143-9.57
CAediting_846604chr11_93733708_-ENSG00000133789.13ENST00000534562hsa-miR-1304-3p974024097402467mer-m897402269740247151-19.02
CAediting_1160181chr17_7017644_-ENSG00000133789.13ENST00000447399hsa-miR-195-3p975049497505007mer-m897504809750501158-14.97
CAediting_414656chr5_72878640_+ENSG00000133789.13ENST00000447399hsa-miR-4804-3p975050097505067mer-m897504879750507144-13.2
CAediting_524911chr7_5495852_-ENSG00000133789.13ENST00000447399hsa-miR-589-3p975078497507918mer-1a97507669750791147-18.31

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_442554chr5_154685830_+ENSG00000133789.13ENST00000447399hsa-miR-1303975041197504177mer-m897503979750418142-12.78
CAediting_1368054chr19_46709310_-ENSG00000133789.13ENST00000447399hsa-miR-320e975030897503147mer-m897502989750315147-14.17
CAediting_468389chr6_31355314_-ENSG00000133789.13ENST00000447399hsa-miR-6891-5p975092597509306mer97509119750931144-23.41
CAediting_442554chr5_154685830_+ENSG00000133789.13ENST00000534562hsa-miR-1303975041197504177mer-m897503979750418142-12.78

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SWAP70

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SWAP70

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LUADCAediting_797693chr11_9741989_+0.02222061286911870.285472401600273....

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Relation with cancer stages for SWAP70

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for SWAP70

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for SWAP70

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SWAP70

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource