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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: RBM34 (CAeditome ID:23029)

Gene summary for RBM34

check button Gene summary
Gene informationGene symbol

RBM34

Gene ID

23029

Gene nameRNA binding motif protein 34
Synonyms-
Cytomap

1q42.3

Type of geneprotein-coding
DescriptionRNA-binding protein 34epididymis secretory sperm binding protein
Modification date20210518
UniProtAcc

P42696

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
RBM34

GO:0005654

RNA-binding protein 34

0000052

RBM34

GO:0005694

RNA-binding protein 34

0000052

RBM34

GO:0005730

RNA-binding protein 34

0000052


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RNA A-to-I events for RBM34

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000188739.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_146466(235131262, -), CAediting_146467(235131384, -), CAediting_146468(235131425, -), CAediting_146469(235131445, -), CAediting_146470(235131451, -), CAediting_146471(235131501, -), CAediting_146472(235132321, -), CAediting_146473(235132345, -), CAediting_146474(235132361, -), CAediting_146475(235132374, -), CAediting_146476(235132376, -), CAediting_146477(235132385, -), CAediting_146478(235132387, -), CAediting_146479(235132392, -), CAediting_146480(235132398, -), CAediting_146481(235132401, -), CAediting_146482(235132405, -), CAediting_146483(235132419, -), CAediting_146484(235132420, -), CAediting_146485(235132437, -), CAediting_146486(235132447, -), CAediting_146487(235132473, -), CAediting_146488(235132478, -), CAediting_146489(235132479, -), CAediting_146490(235132486, -), CAediting_146491(235132491, -), CAediting_146492(235132512, -), CAediting_146493(235132541, -), CAediting_146494(235132574, -), CAediting_146495(235132579, -), CAediting_146496(235133085, -), CAediting_146497(235133099, -), CAediting_146498(235133116, -), CAediting_146499(235133124, -), CAediting_146500(235133125, -), CAediting_146501(235133137, -), CAediting_146502(235133138, -), CAediting_146503(235133150, -), CAediting_146504(235133162, -), CAediting_146505(235133166, -), CAediting_146506(235133173, -), CAediting_146507(235133175, -), CAediting_146508(235133185, -), CAediting_146509(235133193, -), CAediting_146510(235133194, -), CAediting_146511(235133229, -), CAediting_146512(235133241, -), CAediting_146513(235133265, -), CAediting_146514(235133289, -), CAediting_146515(235133297, -), CAediting_146516(235133315, -), CAediting_146517(235133333, -), CAediting_146518(235133339, -), CAediting_146519(235133900, -), CAediting_146520(235133923, -), CAediting_146521(235133931, -), CAediting_146522(235133960, -), CAediting_146523(235133961, -), CAediting_146524(235133987, -), CAediting_146525(235134111, -), CAediting_146526(235134119, -), CAediting_146527(235134125, -), CAediting_146528(235134134, -), CAediting_146529(235134161, -), CAediting_146530(235134187, -), CAediting_146531(235134191, -), CAediting_146532(235134192, -), CAediting_146533(235134193, -), CAediting_146534(235134196, -), CAediting_146535(235134198, -), CAediting_146536(235134200, -), CAediting_146537(235134201, -), CAediting_146538(235134202, -), CAediting_146539(235134270, -), CAediting_146540(235134296, -), CAediting_146541(235134297, -), CAediting_146542(235134356, -), CAediting_146543(235134380, -), CAediting_146544(235134406, -), CAediting_146545(235134411, -), CAediting_146546(235134418, -), CAediting_146547(235134433, -), CAediting_146548(235134797, -), CAediting_146549(235134812, -), CAediting_146550(235134830, -), CAediting_146551(235134841, -), CAediting_146552(235134842, -), CAediting_146553(235134873, -), CAediting_146554(235134882, -), CAediting_146555(235134917, -), CAediting_146556(235134937, -), CAediting_146557(235134968, -), CAediting_146558(235134975, -), CAediting_146559(235135008, -), CAediting_146560(235135016, -), CAediting_146561(235135141, -), CAediting_146562(235135156, -), CAediting_146563(235135182, -), CAediting_146564(235135183, -), CAediting_146565(235135205, -), CAediting_146566(235135222, -), CAediting_146567(235135258, -), CAediting_146568(235135353, -), CAediting_146569(235135366, -), CAediting_146570(235135377, -), CAediting_146571(235135405, -), CAediting_146572(235135406, -), CAediting_146573(235135425, -), CAediting_146574(235135496, -), CAediting_146575(235135501, -), CAediting_146576(235135502, -), CAediting_146577(235135524, -), CAediting_146578(235137627, -), CAediting_146579(235137642, -), CAediting_146580(235137643, -), CAediting_146581(235142341, -), CAediting_146582(235142407, -), CAediting_146583(235142762, -), CAediting_146584(235142803, -), CAediting_146585(235142820, -), CAediting_146586(235142881, -), CAediting_146587(235143606, -), CAediting_146588(235143616, -), CAediting_146589(235143655, -), CAediting_146590(235143656, -), CAediting_146591(235143675, -), CAediting_146592(235143694, -), CAediting_146593(235143922, -), CAediting_146594(235143934, -), CAediting_146595(235143935, -), CAediting_146596(235143997, -), CAediting_146597(235144055, -), CAediting_146598(235144091, -), CAediting_146599(235144094, -), CAediting_146600(235144095, -), CAediting_146601(235144647, -), CAediting_146602(235144661, -), CAediting_146603(235144664, -), CAediting_146604(235144671, -), CAediting_146605(235144687, -), CAediting_146606(235144695, -), CAediting_146607(235144709, -), CAediting_146608(235144714, -), CAediting_146609(235144715, -), CAediting_146610(235144758, -), CAediting_146611(235144919, -), CAediting_146612(235144921, -), CAediting_146613(235144943, -), CAediting_146614(235144960, -), CAediting_146615(235145380, -), CAediting_146616(235145415, -), CAediting_146617(235145423, -), CAediting_146618(235145433, -), CAediting_146619(235145441, -), CAediting_146620(235145446, -), CAediting_146621(235145460, -), CAediting_146622(235145466, -), CAediting_146623(235145510, -), CAediting_146624(235145550, -), CAediting_146625(235145551, -), CAediting_146626(235145573, -), CAediting_146627(235145820, -), CAediting_146628(235145846, -), CAediting_146629(235145858, -), CAediting_146630(235145878, -), CAediting_146631(235145883, -), CAediting_146632(235145888, -), CAediting_146633(235145924, -), CAediting_146634(235145934, -), CAediting_146635(235145950, -), CAediting_146636(235146080, -), CAediting_146637(235146101, -), CAediting_146638(235146126, -), CAediting_146639(235146188, -), CAediting_146640(235146197, -), CAediting_146641(235146204, -), CAediting_146642(235146235, -), CAediting_146643(235146731, -), CAediting_146644(235146749, -), CAediting_146645(235146759, -), CAediting_146646(235146782, -), CAediting_146647(235146785, -), CAediting_146648(235146794, -), CAediting_146649(235146858, -), CAediting_146650(235146968, -), CAediting_146651(235146986, -), CAediting_146652(235146987, -), CAediting_146653(235146996, -), CAediting_146654(235147065, -), CAediting_146655(235147084, -), CAediting_146656(235147085, -), CAediting_146657(235147162, -), CAediting_146658(235147163, -), CAediting_146659(235147169, -), CAediting_146660(235147174, -), CAediting_146661(235147187, -), CAediting_146662(235147193, -), CAediting_146663(235149132, -), CAediting_146664(235150081, -), CAediting_146665(235150157, -), CAediting_146666(235150166, -), CAediting_146667(235150171, -), CAediting_146668(235150172, -), CAediting_146669(235150212, -), CAediting_146670(235150213, -), CAediting_146671(235150239, -), CAediting_146672(235150242, -), CAediting_146673(235150243, -), CAediting_146674(235150248, -), CAediting_146675(235150252, -), CAediting_146676(235150254, -), CAediting_146677(235150257, -), CAediting_146678(235150270, -), CAediting_146679(235150271, -), CAediting_146680(235150278, -), CAediting_146681(235150279, -), CAediting_146682(235150293, -), CAediting_146683(235150299, -), CAediting_146684(235150300, -), CAediting_146685(235150312, -), CAediting_146686(235150317, -), CAediting_146687(235150321, -), CAediting_146688(235150342, -), CAediting_146689(235150343, -), CAediting_146690(235150359, -), CAediting_146691(235151776, -), CAediting_146692(235151829, -), CAediting_146693(235151830, -), CAediting_146694(235151845, -), CAediting_146695(235151911, -), CAediting_146696(235151933, -), CAediting_146697(235151981, -), CAediting_146698(235152899, -), CAediting_146699(235152972, -), CAediting_146700(235153629, -), CAediting_146701(235153630, -), CAediting_146702(235153698, -), CAediting_146703(235153699, -), CAediting_146704(235153721, -), CAediting_146705(235153988, -), CAediting_146706(235153990, -), CAediting_146707(235154002, -), CAediting_146708(235154003, -), CAediting_146709(235154124, -), CAediting_146710(235154337, -), CAediting_146711(235154354, -), CAediting_146712(235154369, -), CAediting_146713(235154442, -), CAediting_146714(235154452, -), CAediting_146715(235154464, -), CAediting_146716(235154520, -), CAediting_146717(235155357, -), CAediting_146718(235155572, -), CAediting_146719(235155590, -), CAediting_146720(235155596, -), CAediting_146721(235155601, -), CAediting_146722(235155611, -), CAediting_146723(235155612, -), CAediting_146724(235155681, -), CAediting_146725(235155682, -), CAediting_146726(235155684, -), CAediting_146727(235155755, -), CAediting_146728(235155981, -), CAediting_146729(235156008, -), CAediting_146730(235156049, -), CAediting_146731(235156069, -), CAediting_146732(235156140, -), CAediting_146733(235156141, -), CAediting_146734(235156203, -), CAediting_146735(235156222, -), CAediting_146736(235156299, -), CAediting_146737(235158867, -), CAediting_146738(235158873, -), CAediting_146739(235158899, -), CAediting_146740(235158921, -), CAediting_146741(235158935, -), CAediting_146742(235158949, -), CAediting_146743(235159047, -), CAediting_146744(235159365, -), CAediting_146745(235159997, -), CAediting_146746(235160002, -), CAediting_146747(235160009, -), CAediting_146748(235160024, -), CAediting_146749(235160062, -), CAediting_146750(235160082, -), CAediting_146751(235160091, -), CAediting_146752(235160132, -), CAediting_146753(235160176, -), CAediting_146754(235160200, -), CAediting_146755(235160232, -), CAediting_146756(235160250, -),

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RNA editing positional annotations for RBM34 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_146466chr1_235131262_-UTR3
CAediting_146467chr1_235131384_-UTR3
CAediting_146468chr1_235131425_-UTR3
CAediting_146469chr1_235131445_-UTR3
CAediting_146470chr1_235131451_-UTR3
CAediting_146471chr1_235131501_-UTR3
CAediting_146472chr1_235132321_-ncRNA_intronic
CAediting_146473chr1_235132345_-ncRNA_intronic
CAediting_146474chr1_235132361_-ncRNA_intronic
CAediting_146475chr1_235132374_-ncRNA_intronic
CAediting_146476chr1_235132376_-ncRNA_intronic
CAediting_146477chr1_235132385_-ncRNA_intronic
CAediting_146478chr1_235132387_-ncRNA_intronic
CAediting_146479chr1_235132392_-ncRNA_intronic
CAediting_146480chr1_235132398_-ncRNA_intronic
CAediting_146481chr1_235132401_-ncRNA_intronic
CAediting_146482chr1_235132405_-ncRNA_intronic
CAediting_146483chr1_235132419_-ncRNA_intronic
CAediting_146484chr1_235132420_-ncRNA_intronic
CAediting_146485chr1_235132437_-ncRNA_intronic
CAediting_146486chr1_235132447_-ncRNA_intronic
CAediting_146487chr1_235132473_-ncRNA_intronic
CAediting_146488chr1_235132478_-ncRNA_intronic
CAediting_146489chr1_235132479_-ncRNA_intronic
CAediting_146490chr1_235132486_-ncRNA_intronic
CAediting_146491chr1_235132491_-ncRNA_intronic
CAediting_146492chr1_235132512_-ncRNA_intronic
CAediting_146493chr1_235132541_-ncRNA_intronic
CAediting_146494chr1_235132574_-ncRNA_intronic
CAediting_146495chr1_235132579_-ncRNA_intronic
CAediting_146496chr1_235133085_-ncRNA_intronic
CAediting_146497chr1_235133099_-ncRNA_intronic
CAediting_146498chr1_235133116_-ncRNA_intronic
CAediting_146499chr1_235133124_-ncRNA_intronic
CAediting_146500chr1_235133125_-ncRNA_intronic
CAediting_146501chr1_235133137_-ncRNA_intronic
CAediting_146502chr1_235133138_-ncRNA_intronic
CAediting_146503chr1_235133150_-ncRNA_intronic
CAediting_146504chr1_235133162_-ncRNA_intronic
CAediting_146505chr1_235133166_-ncRNA_intronic
CAediting_146506chr1_235133173_-ncRNA_intronic
CAediting_146507chr1_235133175_-ncRNA_intronic
CAediting_146508chr1_235133185_-ncRNA_intronic
CAediting_146509chr1_235133193_-ncRNA_intronic
CAediting_146510chr1_235133194_-ncRNA_intronic
CAediting_146511chr1_235133229_-ncRNA_intronic
CAediting_146512chr1_235133241_-ncRNA_intronic
CAediting_146513chr1_235133265_-ncRNA_intronic
CAediting_146514chr1_235133289_-ncRNA_intronic
CAediting_146515chr1_235133297_-ncRNA_intronic
CAediting_146516chr1_235133315_-ncRNA_intronic
CAediting_146517chr1_235133333_-ncRNA_intronic
CAediting_146518chr1_235133339_-ncRNA_intronic
CAediting_146519chr1_235133900_-ncRNA_intronic
CAediting_146520chr1_235133923_-ncRNA_intronic
CAediting_146521chr1_235133931_-ncRNA_intronic
CAediting_146522chr1_235133960_-ncRNA_intronic
CAediting_146523chr1_235133961_-ncRNA_intronic
CAediting_146524chr1_235133987_-ncRNA_intronic
CAediting_146525chr1_235134111_-ncRNA_intronic
CAediting_146526chr1_235134119_-ncRNA_intronic
CAediting_146527chr1_235134125_-ncRNA_intronic
CAediting_146528chr1_235134134_-ncRNA_intronic
CAediting_146529chr1_235134161_-ncRNA_intronic
CAediting_146530chr1_235134187_-ncRNA_intronic
CAediting_146531chr1_235134191_-ncRNA_intronic
CAediting_146532chr1_235134192_-ncRNA_intronic
CAediting_146533chr1_235134193_-ncRNA_intronic
CAediting_146534chr1_235134196_-ncRNA_intronic
CAediting_146535chr1_235134198_-ncRNA_intronic
CAediting_146536chr1_235134200_-ncRNA_intronic
CAediting_146537chr1_235134201_-ncRNA_intronic
CAediting_146538chr1_235134202_-ncRNA_intronic
CAediting_146539chr1_235134270_-ncRNA_intronic
CAediting_146540chr1_235134296_-ncRNA_intronic
CAediting_146541chr1_235134297_-ncRNA_intronic
CAediting_146542chr1_235134356_-ncRNA_intronic
CAediting_146543chr1_235134380_-ncRNA_intronic
CAediting_146544chr1_235134406_-ncRNA_intronic
CAediting_146545chr1_235134411_-ncRNA_intronic
CAediting_146546chr1_235134418_-ncRNA_intronic
CAediting_146547chr1_235134433_-ncRNA_intronic
CAediting_146548chr1_235134797_-ncRNA_intronic
CAediting_146549chr1_235134812_-ncRNA_intronic
CAediting_146550chr1_235134830_-ncRNA_intronic
CAediting_146551chr1_235134841_-ncRNA_intronic
CAediting_146552chr1_235134842_-ncRNA_intronic
CAediting_146553chr1_235134873_-ncRNA_intronic
CAediting_146554chr1_235134882_-ncRNA_intronic
CAediting_146555chr1_235134917_-ncRNA_intronic
CAediting_146556chr1_235134937_-ncRNA_intronic
CAediting_146557chr1_235134968_-ncRNA_intronic
CAediting_146558chr1_235134975_-ncRNA_intronic
CAediting_146559chr1_235135008_-ncRNA_intronic
CAediting_146560chr1_235135016_-ncRNA_intronic
CAediting_146561chr1_235135141_-ncRNA_intronic
CAediting_146562chr1_235135156_-ncRNA_intronic
CAediting_146563chr1_235135182_-ncRNA_intronic
CAediting_146564chr1_235135183_-ncRNA_intronic
CAediting_146565chr1_235135205_-ncRNA_intronic
CAediting_146566chr1_235135222_-ncRNA_intronic
CAediting_146567chr1_235135258_-ncRNA_intronic
CAediting_146568chr1_235135353_-ncRNA_intronic
CAediting_146569chr1_235135366_-ncRNA_intronic
CAediting_146570chr1_235135377_-ncRNA_intronic
CAediting_146571chr1_235135405_-ncRNA_intronic
CAediting_146572chr1_235135406_-ncRNA_intronic
CAediting_146573chr1_235135425_-ncRNA_intronic
CAediting_146574chr1_235135496_-ncRNA_intronic
CAediting_146575chr1_235135501_-ncRNA_intronic
CAediting_146576chr1_235135502_-ncRNA_intronic
CAediting_146577chr1_235135524_-ncRNA_intronic
CAediting_146578chr1_235137627_-intronic
CAediting_146579chr1_235137642_-intronic
CAediting_146580chr1_235137643_-intronic
CAediting_146581chr1_235142341_-intronic
CAediting_146582chr1_235142407_-intronic
CAediting_146583chr1_235142762_-intronic
CAediting_146584chr1_235142803_-intronic
CAediting_146585chr1_235142820_-intronic
CAediting_146586chr1_235142881_-intronic
CAediting_146587chr1_235143606_-intronic
CAediting_146588chr1_235143616_-intronic
CAediting_146589chr1_235143655_-intronic
CAediting_146590chr1_235143656_-intronic
CAediting_146591chr1_235143675_-intronic
CAediting_146592chr1_235143694_-intronic
CAediting_146593chr1_235143922_-intronic
CAediting_146594chr1_235143934_-intronic
CAediting_146595chr1_235143935_-intronic
CAediting_146596chr1_235143997_-intronic
CAediting_146597chr1_235144055_-intronic
CAediting_146598chr1_235144091_-intronic
CAediting_146599chr1_235144094_-intronic
CAediting_146600chr1_235144095_-intronic
CAediting_146601chr1_235144647_-intronic
CAediting_146602chr1_235144661_-intronic
CAediting_146603chr1_235144664_-intronic
CAediting_146604chr1_235144671_-intronic
CAediting_146605chr1_235144687_-intronic
CAediting_146606chr1_235144695_-intronic
CAediting_146607chr1_235144709_-intronic
CAediting_146608chr1_235144714_-intronic
CAediting_146609chr1_235144715_-intronic
CAediting_146610chr1_235144758_-intronic
CAediting_146611chr1_235144919_-intronic
CAediting_146612chr1_235144921_-intronic
CAediting_146613chr1_235144943_-intronic
CAediting_146614chr1_235144960_-intronic
CAediting_146615chr1_235145380_-intronic
CAediting_146616chr1_235145415_-intronic
CAediting_146617chr1_235145423_-intronic
CAediting_146618chr1_235145433_-intronic
CAediting_146619chr1_235145441_-intronic
CAediting_146620chr1_235145446_-intronic
CAediting_146621chr1_235145460_-intronic
CAediting_146622chr1_235145466_-intronic
CAediting_146623chr1_235145510_-intronic
CAediting_146624chr1_235145550_-intronic
CAediting_146625chr1_235145551_-intronic
CAediting_146626chr1_235145573_-intronic
CAediting_146627chr1_235145820_-intronic
CAediting_146628chr1_235145846_-intronic
CAediting_146629chr1_235145858_-intronic
CAediting_146630chr1_235145878_-intronic
CAediting_146631chr1_235145883_-intronic
CAediting_146632chr1_235145888_-intronic
CAediting_146633chr1_235145924_-intronic
CAediting_146634chr1_235145934_-intronic
CAediting_146635chr1_235145950_-intronic
CAediting_146636chr1_235146080_-intronic
CAediting_146637chr1_235146101_-intronic
CAediting_146638chr1_235146126_-intronic
CAediting_146639chr1_235146188_-intronic
CAediting_146640chr1_235146197_-intronic
CAediting_146641chr1_235146204_-intronic
CAediting_146642chr1_235146235_-intronic
CAediting_146643chr1_235146731_-intronic
CAediting_146644chr1_235146749_-intronic
CAediting_146645chr1_235146759_-intronic
CAediting_146646chr1_235146782_-intronic
CAediting_146647chr1_235146785_-intronic
CAediting_146648chr1_235146794_-intronic
CAediting_146649chr1_235146858_-intronic
CAediting_146650chr1_235146968_-intronic
CAediting_146651chr1_235146986_-intronic
CAediting_146652chr1_235146987_-intronic
CAediting_146653chr1_235146996_-intronic
CAediting_146654chr1_235147065_-intronic
CAediting_146655chr1_235147084_-intronic
CAediting_146656chr1_235147085_-intronic
CAediting_146657chr1_235147162_-intronic
CAediting_146658chr1_235147163_-intronic
CAediting_146659chr1_235147169_-intronic
CAediting_146660chr1_235147174_-intronic
CAediting_146661chr1_235147187_-intronic
CAediting_146662chr1_235147193_-intronic
CAediting_146663chr1_235149132_-intronic
CAediting_146664chr1_235150081_-intronic
CAediting_146665chr1_235150157_-intronic
CAediting_146666chr1_235150166_-intronic
CAediting_146667chr1_235150171_-intronic
CAediting_146668chr1_235150172_-intronic
CAediting_146669chr1_235150212_-intronic
CAediting_146670chr1_235150213_-intronic
CAediting_146671chr1_235150239_-intronic
CAediting_146672chr1_235150242_-intronic
CAediting_146673chr1_235150243_-intronic
CAediting_146674chr1_235150248_-intronic
CAediting_146675chr1_235150252_-intronic
CAediting_146676chr1_235150254_-intronic
CAediting_146677chr1_235150257_-intronic
CAediting_146678chr1_235150270_-intronic
CAediting_146679chr1_235150271_-intronic
CAediting_146680chr1_235150278_-intronic
CAediting_146681chr1_235150279_-intronic
CAediting_146682chr1_235150293_-intronic
CAediting_146683chr1_235150299_-intronic
CAediting_146684chr1_235150300_-intronic
CAediting_146685chr1_235150312_-intronic
CAediting_146686chr1_235150317_-intronic
CAediting_146687chr1_235150321_-intronic
CAediting_146688chr1_235150342_-intronic
CAediting_146689chr1_235150343_-intronic
CAediting_146690chr1_235150359_-intronic
CAediting_146691chr1_235151776_-intronic
CAediting_146692chr1_235151829_-intronic
CAediting_146693chr1_235151830_-intronic
CAediting_146694chr1_235151845_-intronic
CAediting_146695chr1_235151911_-intronic
CAediting_146696chr1_235151933_-intronic
CAediting_146697chr1_235151981_-intronic
CAediting_146698chr1_235152899_-ncRNA_intronic
CAediting_146699chr1_235152972_-ncRNA_intronic
CAediting_146700chr1_235153629_-ncRNA_intronic
CAediting_146701chr1_235153630_-ncRNA_intronic
CAediting_146702chr1_235153698_-ncRNA_intronic
CAediting_146703chr1_235153699_-ncRNA_intronic
CAediting_146704chr1_235153721_-ncRNA_intronic
CAediting_146705chr1_235153988_-ncRNA_intronic
CAediting_146706chr1_235153990_-ncRNA_intronic
CAediting_146707chr1_235154002_-ncRNA_intronic
CAediting_146708chr1_235154003_-ncRNA_intronic
CAediting_146709chr1_235154124_-ncRNA_intronic
CAediting_146710chr1_235154337_-ncRNA_intronic
CAediting_146711chr1_235154354_-ncRNA_intronic
CAediting_146712chr1_235154369_-ncRNA_intronic
CAediting_146713chr1_235154442_-ncRNA_intronic
CAediting_146714chr1_235154452_-ncRNA_intronic
CAediting_146715chr1_235154464_-ncRNA_intronic
CAediting_146716chr1_235154520_-ncRNA_intronic
CAediting_146717chr1_235155357_-ncRNA_intronic
CAediting_146718chr1_235155572_-ncRNA_intronic
CAediting_146719chr1_235155590_-ncRNA_intronic
CAediting_146720chr1_235155596_-ncRNA_intronic
CAediting_146721chr1_235155601_-ncRNA_intronic
CAediting_146722chr1_235155611_-ncRNA_intronic
CAediting_146723chr1_235155612_-ncRNA_intronic
CAediting_146724chr1_235155681_-ncRNA_intronic
CAediting_146725chr1_235155682_-ncRNA_intronic
CAediting_146726chr1_235155684_-ncRNA_intronic
CAediting_146727chr1_235155755_-ncRNA_intronic
CAediting_146728chr1_235155981_-ncRNA_intronic
CAediting_146729chr1_235156008_-ncRNA_intronic
CAediting_146730chr1_235156049_-ncRNA_intronic
CAediting_146731chr1_235156069_-ncRNA_intronic
CAediting_146732chr1_235156140_-ncRNA_intronic
CAediting_146733chr1_235156141_-ncRNA_intronic
CAediting_146734chr1_235156203_-ncRNA_intronic
CAediting_146735chr1_235156222_-ncRNA_intronic
CAediting_146736chr1_235156299_-ncRNA_intronic
CAediting_146737chr1_235158867_-ncRNA_intronic
CAediting_146738chr1_235158873_-ncRNA_intronic
CAediting_146739chr1_235158899_-ncRNA_intronic
CAediting_146740chr1_235158921_-ncRNA_intronic
CAediting_146741chr1_235158935_-ncRNA_intronic
CAediting_146742chr1_235158949_-ncRNA_intronic
CAediting_146743chr1_235159047_-ncRNA_intronic
CAediting_146744chr1_235159365_-ncRNA_intronic
CAediting_146745chr1_235159997_-ncRNA_intronic
CAediting_146746chr1_235160002_-ncRNA_intronic
CAediting_146747chr1_235160009_-ncRNA_intronic
CAediting_146748chr1_235160024_-ncRNA_intronic
CAediting_146749chr1_235160062_-ncRNA_intronic
CAediting_146750chr1_235160082_-ncRNA_intronic
CAediting_146751chr1_235160091_-ncRNA_intronic
CAediting_146752chr1_235160132_-ncRNA_intronic
CAediting_146753chr1_235160176_-ncRNA_exonic
CAediting_146754chr1_235160200_-ncRNA_exonic
CAediting_146755chr1_235160232_-ncRNA_exonic
CAediting_146756chr1_235160250_-ncRNA_exonic;splicing

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_146466chr1_235131262_-SINEAluAluSq2
CAediting_146467chr1_235131384_-SINEAluAluSq2
CAediting_146468chr1_235131425_-SINEAluAluSq2
CAediting_146469chr1_235131445_-SINEAluAluSq2
CAediting_146470chr1_235131451_-SINEAluAluSq2
CAediting_146471chr1_235131501_-SINEAluAluSq2
CAediting_146472chr1_235132321_-SINEAluAluSc
CAediting_146473chr1_235132345_-SINEAluAluSc
CAediting_146474chr1_235132361_-SINEAluAluSc
CAediting_146475chr1_235132374_-SINEAluAluSc
CAediting_146476chr1_235132376_-SINEAluAluSc
CAediting_146477chr1_235132385_-SINEAluAluSc
CAediting_146478chr1_235132387_-SINEAluAluSc
CAediting_146479chr1_235132392_-SINEAluAluSc
CAediting_146480chr1_235132398_-SINEAluAluSc
CAediting_146481chr1_235132401_-SINEAluAluSc
CAediting_146482chr1_235132405_-SINEAluAluSc
CAediting_146483chr1_235132419_-SINEAluAluSc
CAediting_146484chr1_235132420_-SINEAluAluSc
CAediting_146485chr1_235132437_-SINEAluAluSc
CAediting_146486chr1_235132447_-SINEAluAluSc
CAediting_146487chr1_235132473_-SINEAluAluSc
CAediting_146488chr1_235132478_-SINEAluAluSc
CAediting_146489chr1_235132479_-SINEAluAluSc
CAediting_146490chr1_235132486_-SINEAluAluSc
CAediting_146491chr1_235132491_-SINEAluAluSc
CAediting_146492chr1_235132512_-SINEAluAluSc
CAediting_146493chr1_235132541_-SINEAluAluSc
CAediting_146494chr1_235132574_-SINEAluAluSc
CAediting_146495chr1_235132579_-SINEAluAluSc
CAediting_146496chr1_235133085_-SINEAluAluJb
CAediting_146497chr1_235133099_-SINEAluAluJb
CAediting_146498chr1_235133116_-SINEAluAluJb
CAediting_146499chr1_235133124_-SINEAluAluJb
CAediting_146500chr1_235133125_-SINEAluAluJb
CAediting_146501chr1_235133137_-SINEAluAluJb
CAediting_146502chr1_235133138_-SINEAluAluJb
CAediting_146503chr1_235133150_-SINEAluAluJb
CAediting_146504chr1_235133162_-SINEAluAluJb
CAediting_146505chr1_235133166_-SINEAluAluJb
CAediting_146506chr1_235133173_-SINEAluAluJb
CAediting_146507chr1_235133175_-SINEAluAluJb
CAediting_146508chr1_235133185_-SINEAluAluJb
CAediting_146509chr1_235133193_-SINEAluAluJb
CAediting_146510chr1_235133194_-SINEAluAluJb
CAediting_146511chr1_235133229_-SINEAluAluJb
CAediting_146512chr1_235133241_-SINEAluAluJb
CAediting_146513chr1_235133265_-SINEAluAluJb
CAediting_146514chr1_235133289_-SINEAluAluJb
CAediting_146515chr1_235133297_-SINEAluAluJb
CAediting_146516chr1_235133315_-SINEAluAluJb
CAediting_146517chr1_235133333_-SINEAluAluJb
CAediting_146518chr1_235133339_-SINEAluAluJb
CAediting_146519chr1_235133900_-SINEAluAluJr
CAediting_146520chr1_235133923_-SINEAluAluJr
CAediting_146521chr1_235133931_-SINEAluAluJr
CAediting_146522chr1_235133960_-SINEAluAluJr
CAediting_146523chr1_235133961_-SINEAluAluJr
CAediting_146524chr1_235133987_-SINEAluAluJr
CAediting_146525chr1_235134111_-SINEAluAluJb
CAediting_146526chr1_235134119_-SINEAluAluJb
CAediting_146527chr1_235134125_-SINEAluAluJb
CAediting_146528chr1_235134134_-SINEAluAluJb
CAediting_146529chr1_235134161_-SINEAluAluJb
CAediting_146530chr1_235134187_-SINEAluAluJb
CAediting_146531chr1_235134191_-SINEAluAluJb
CAediting_146532chr1_235134192_-SINEAluAluJb
CAediting_146533chr1_235134193_-SINEAluAluJb
CAediting_146534chr1_235134196_-SINEAluAluJb
CAediting_146535chr1_235134198_-SINEAluAluJb
CAediting_146536chr1_235134200_-SINEAluAluJb
CAediting_146537chr1_235134201_-SINEAluAluJb
CAediting_146538chr1_235134202_-SINEAluAluJb
CAediting_146539chr1_235134270_-SINEAluAluJb
CAediting_146540chr1_235134296_-SINEAluAluJb
CAediting_146541chr1_235134297_-SINEAluAluJb
CAediting_146542chr1_235134356_-SINEAluAluJr
CAediting_146543chr1_235134380_-SINEAluAluJr
CAediting_146544chr1_235134406_-SINEAluAluJr
CAediting_146545chr1_235134411_-SINEAluAluJr
CAediting_146546chr1_235134418_-SINEAluAluJr
CAediting_146547chr1_235134433_-SINEAluAluJr
CAediting_146548chr1_235134797_-SINEAluAluSp
CAediting_146549chr1_235134812_-SINEAluAluSp
CAediting_146550chr1_235134830_-SINEAluAluSp
CAediting_146551chr1_235134841_-SINEAluAluSp
CAediting_146552chr1_235134842_-SINEAluAluSp
CAediting_146553chr1_235134873_-SINEAluAluSp
CAediting_146554chr1_235134882_-SINEAluAluSp
CAediting_146555chr1_235134917_-SINEAluAluSp
CAediting_146556chr1_235134937_-SINEAluAluSp
CAediting_146557chr1_235134968_-SINEAluAluSp
CAediting_146558chr1_235134975_-SINEAluAluSp
CAediting_146559chr1_235135008_-SINEAluAluSp
CAediting_146560chr1_235135016_-SINEAluAluSp
CAediting_146561chr1_235135141_-SINEAluAluSx
CAediting_146562chr1_235135156_-SINEAluAluSx
CAediting_146563chr1_235135182_-SINEAluAluSx
CAediting_146564chr1_235135183_-SINEAluAluSx
CAediting_146565chr1_235135205_-SINEAluAluSx
CAediting_146566chr1_235135222_-SINEAluAluSx1
CAediting_146567chr1_235135258_-SINEAluAluSx1
CAediting_146568chr1_235135353_-SINEAluAluSx1
CAediting_146569chr1_235135366_-SINEAluAluSx1
CAediting_146570chr1_235135377_-SINEAluAluSx1
CAediting_146571chr1_235135405_-SINEAluAluSx1
CAediting_146572chr1_235135406_-SINEAluAluSx1
CAediting_146573chr1_235135425_-SINEAluAluSx1
CAediting_146574chr1_235135496_-SINEAluAluSx1
CAediting_146575chr1_235135501_-SINEAluAluSx1
CAediting_146576chr1_235135502_-SINEAluAluSx1
CAediting_146577chr1_235135524_-SINEAluAluSx1
CAediting_146578chr1_235137627_-SINEAluAluJo
CAediting_146579chr1_235137642_-SINEAluAluJo
CAediting_146580chr1_235137643_-SINEAluAluJo
CAediting_146581chr1_235142341_-SINEAluAluSq2
CAediting_146582chr1_235142407_-SINEAluAluSq2
CAediting_146583chr1_235142762_-SINEAluAluSx
CAediting_146584chr1_235142803_-SINEAluAluSx
CAediting_146585chr1_235142820_-SINEAluAluSx
CAediting_146586chr1_235142881_-SINEAluAluSx
CAediting_146587chr1_235143606_-SINEAluAluSx
CAediting_146588chr1_235143616_-SINEAluAluSx
CAediting_146589chr1_235143655_-SINEAluAluSx
CAediting_146590chr1_235143656_-SINEAluAluSx
CAediting_146591chr1_235143675_-SINEAluAluSx
CAediting_146592chr1_235143694_-SINEAluAluSx
CAediting_146593chr1_235143922_-SINEAluAluJb
CAediting_146594chr1_235143934_-SINEAluAluJb
CAediting_146595chr1_235143935_-SINEAluAluJb
CAediting_146596chr1_235143997_-SINEAluAluJb
CAediting_146597chr1_235144055_-SINEAluAluJb
CAediting_146598chr1_235144091_-SINEAluAluJb
CAediting_146599chr1_235144094_-SINEAluAluJb
CAediting_146600chr1_235144095_-SINEAluAluJb
CAediting_146601chr1_235144647_-SINEAluAluJo
CAediting_146602chr1_235144661_-SINEAluAluJo
CAediting_146603chr1_235144664_-SINEAluAluJo
CAediting_146604chr1_235144671_-SINEAluAluJo
CAediting_146605chr1_235144687_-SINEAluAluJo
CAediting_146606chr1_235144695_-SINEAluAluJo
CAediting_146607chr1_235144709_-SINEAluAluJo
CAediting_146608chr1_235144714_-SINEAluAluJo
CAediting_146609chr1_235144715_-SINEAluAluJo
CAediting_146611chr1_235144919_-SINEAluAluSp
CAediting_146612chr1_235144921_-SINEAluAluSp
CAediting_146613chr1_235144943_-SINEAluAluSp
CAediting_146614chr1_235144960_-SINEAluAluSp
CAediting_146615chr1_235145380_-SINEAluAluJo
CAediting_146616chr1_235145415_-SINEAluAluJo
CAediting_146617chr1_235145423_-SINEAluAluJo
CAediting_146618chr1_235145433_-SINEAluAluJo
CAediting_146619chr1_235145441_-SINEAluAluJo
CAediting_146620chr1_235145446_-SINEAluAluJo
CAediting_146621chr1_235145460_-SINEAluAluJo
CAediting_146622chr1_235145466_-SINEAluAluJo
CAediting_146623chr1_235145510_-SINEAluAluJo
CAediting_146624chr1_235145550_-SINEAluAluJo
CAediting_146625chr1_235145551_-SINEAluAluJo
CAediting_146626chr1_235145573_-SINEAluAluJo
CAediting_146627chr1_235145820_-SINEAluAluJr
CAediting_146628chr1_235145846_-SINEAluAluJr
CAediting_146629chr1_235145858_-SINEAluAluJr
CAediting_146630chr1_235145878_-SINEAluAluJr
CAediting_146631chr1_235145883_-SINEAluAluJr
CAediting_146632chr1_235145888_-SINEAluAluJr
CAediting_146633chr1_235145924_-SINEAluAluJr
CAediting_146634chr1_235145934_-SINEAluAluJr
CAediting_146636chr1_235146080_-SINEAluAluJo
CAediting_146637chr1_235146101_-SINEAluAluJo
CAediting_146638chr1_235146126_-SINEAluAluJo
CAediting_146639chr1_235146188_-SINEAluAluJo
CAediting_146640chr1_235146197_-SINEAluAluJo
CAediting_146641chr1_235146204_-SINEAluAluJo
CAediting_146642chr1_235146235_-SINEAluAluJo
CAediting_146643chr1_235146731_-SINEAluAluSz6
CAediting_146644chr1_235146749_-SINEAluAluSz6
CAediting_146645chr1_235146759_-SINEAluAluSz6
CAediting_146646chr1_235146782_-SINEAluAluSz6
CAediting_146647chr1_235146785_-SINEAluAluSz6
CAediting_146648chr1_235146794_-SINEAluAluSz6
CAediting_146649chr1_235146858_-SINEAluAluSz6
CAediting_146650chr1_235146968_-SINEAluAluJr
CAediting_146651chr1_235146986_-SINEAluAluJr
CAediting_146652chr1_235146987_-SINEAluAluJr
CAediting_146653chr1_235146996_-SINEAluAluJr
CAediting_146654chr1_235147065_-SINEAluAluJr
CAediting_146655chr1_235147084_-SINEAluAluJr
CAediting_146656chr1_235147085_-SINEAluAluJr
CAediting_146657chr1_235147162_-SINEAluAluJr
CAediting_146658chr1_235147163_-SINEAluAluJr
CAediting_146659chr1_235147169_-SINEAluAluJr
CAediting_146660chr1_235147174_-SINEAluAluJr
CAediting_146661chr1_235147187_-SINEAluAluJr
CAediting_146662chr1_235147193_-SINEAluAluJr
CAediting_146663chr1_235149132_-SINEAluAluY
CAediting_146664chr1_235150081_-SINEAluAluSx1
CAediting_146665chr1_235150157_-SINEAluAluSx1
CAediting_146666chr1_235150166_-SINEAluAluSx1
CAediting_146667chr1_235150171_-SINEAluAluSx1
CAediting_146668chr1_235150172_-SINEAluAluSx1
CAediting_146669chr1_235150212_-SINEAluAluSx1
CAediting_146670chr1_235150213_-SINEAluAluSx1
CAediting_146671chr1_235150239_-SINEAluAluSx1
CAediting_146672chr1_235150242_-SINEAluAluSx1
CAediting_146673chr1_235150243_-SINEAluAluSx1
CAediting_146674chr1_235150248_-SINEAluAluSx1
CAediting_146675chr1_235150252_-SINEAluAluSx1
CAediting_146676chr1_235150254_-SINEAluAluSx1
CAediting_146677chr1_235150257_-SINEAluAluSx1
CAediting_146678chr1_235150270_-SINEAluAluSx1
CAediting_146679chr1_235150271_-SINEAluAluSx1
CAediting_146680chr1_235150278_-SINEAluAluSx1
CAediting_146681chr1_235150279_-SINEAluAluSx1
CAediting_146682chr1_235150293_-SINEAluAluSx1
CAediting_146683chr1_235150299_-SINEAluAluSx1
CAediting_146684chr1_235150300_-SINEAluAluSx1
CAediting_146685chr1_235150312_-SINEAluAluSx1
CAediting_146686chr1_235150317_-SINEAluAluSx1
CAediting_146687chr1_235150321_-SINEAluAluSx1
CAediting_146688chr1_235150342_-SINEAluAluSx1
CAediting_146689chr1_235150343_-SINEAluAluSx1
CAediting_146690chr1_235150359_-SINEAluAluSx1
CAediting_146691chr1_235151776_-SINEAluAluSx
CAediting_146692chr1_235151829_-SINEAluAluSx
CAediting_146693chr1_235151830_-SINEAluAluSx
CAediting_146694chr1_235151845_-SINEAluAluSx
CAediting_146695chr1_235151911_-SINEAluAluSx
CAediting_146696chr1_235151933_-SINEAluAluSx
CAediting_146697chr1_235151981_-SINEAluAluSx
CAediting_146698chr1_235152899_-SINEAluAluSx1
CAediting_146699chr1_235152972_-SINEAluAluSx1
CAediting_146700chr1_235153629_-SINEAluAluSx
CAediting_146701chr1_235153630_-SINEAluAluSx
CAediting_146702chr1_235153698_-SINEAluAluSx
CAediting_146703chr1_235153699_-SINEAluAluSx
CAediting_146704chr1_235153721_-SINEAluAluSx
CAediting_146705chr1_235153988_-SINEAluAluY
CAediting_146706chr1_235153990_-SINEAluAluY
CAediting_146707chr1_235154002_-SINEAluAluY
CAediting_146708chr1_235154003_-SINEAluAluY
CAediting_146709chr1_235154124_-SINEAluAluY
CAediting_146710chr1_235154337_-SINEAluAluJo
CAediting_146711chr1_235154354_-SINEAluAluJo
CAediting_146712chr1_235154369_-SINEAluAluJo
CAediting_146713chr1_235154442_-SINEAluAluJo
CAediting_146714chr1_235154452_-SINEAluAluJo
CAediting_146715chr1_235154464_-SINEAluAluJo
CAediting_146716chr1_235154520_-SINEAluAluJo
CAediting_146717chr1_235155357_-SINEAluAluJb
CAediting_146718chr1_235155572_-SINEAluAluSx1
CAediting_146719chr1_235155590_-SINEAluAluSx1
CAediting_146720chr1_235155596_-SINEAluAluSx1
CAediting_146721chr1_235155601_-SINEAluAluSx1
CAediting_146722chr1_235155611_-SINEAluAluSx1
CAediting_146723chr1_235155612_-SINEAluAluSx1
CAediting_146724chr1_235155681_-SINEAluAluSx1
CAediting_146725chr1_235155682_-SINEAluAluSx1
CAediting_146726chr1_235155684_-SINEAluAluSx1
CAediting_146727chr1_235155755_-SINEAluAluSx1
CAediting_146728chr1_235155981_-SINEAluAluSg
CAediting_146729chr1_235156008_-SINEAluAluSg
CAediting_146730chr1_235156049_-SINEAluAluSg
CAediting_146731chr1_235156069_-SINEAluAluSg
CAediting_146732chr1_235156140_-SINEAluAluSg
CAediting_146733chr1_235156141_-SINEAluAluSg
CAediting_146734chr1_235156203_-SINEAluAluJb
CAediting_146735chr1_235156222_-SINEAluAluJb
CAediting_146736chr1_235156299_-SINEAluAluJb
CAediting_146737chr1_235158867_-SINEAluFLAM_C
CAediting_146738chr1_235158873_-SINEAluFLAM_C
CAediting_146739chr1_235158899_-SINEAluFLAM_C
CAediting_146740chr1_235158921_-SINEAluFLAM_C
CAediting_146741chr1_235158935_-SINEAluFLAM_C
CAediting_146742chr1_235158949_-SINEAluFLAM_C
CAediting_146743chr1_235159047_-SINEAluAluJb
CAediting_146744chr1_235159365_-SINEAluAluSx4
CAediting_146745chr1_235159997_-SINEAluAluSz
CAediting_146746chr1_235160002_-SINEAluAluSz
CAediting_146747chr1_235160009_-SINEAluAluSz
CAediting_146748chr1_235160024_-SINEAluAluSz
CAediting_146749chr1_235160062_-SINEAluAluSz
CAediting_146750chr1_235160082_-SINEAluAluSz
CAediting_146751chr1_235160091_-SINEAluAluSz
CAediting_146752chr1_235160132_-SINEAluAluSz
CAediting_146753chr1_235160176_-SINEAluAluSz
CAediting_146754chr1_235160200_-SINEAluAluSz
CAediting_146755chr1_235160232_-SINEAluAluSz
CAediting_146756chr1_235160250_-SINEAluAluSz

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RNA A-to-I editing events in the alternative splicing sites for RBM34

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_146756chr1_235160250_-235160246:2351602683SS0+2iTTGTTTTTGTTTGTTTTGAGATG3.82TTGTTTTTGTTTGTTTTGGGATG-4.13

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000188739.13.RBM34.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000188739.13.RBM34.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RBM34

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RBM34

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for RBM34

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_146468chr1_235131425_-ENSG00000188739.13ENST00000408888hsa-miR-60782351314222351314287mer-m8235131421235131440148.00-20.37
CAediting_146468chr1_235131425_-ENSG00000188739.13ENST00000408888hsa-miR-6720-3p2351314212351314277mer-m8235131420235131442144.00-23.53
CAediting_146469chr1_235131445_-ENSG00000188739.13ENST00000408888hsa-miR-17-3p2351314452351314517mer-m8235131444235131464153.00-18.02
CAediting_146469chr1_235131445_-ENSG00000188739.13ENST00000408888hsa-miR-39292351314422351314476mer235131441235131465140.00-27.65
CAediting_146469chr1_235131445_-ENSG00000188739.13ENST00000408888hsa-miR-485-5p2351314412351314477mer-m8235131440235131460153.00-19.66
CAediting_146469chr1_235131445_-ENSG00000188739.13ENST00000408888hsa-miR-6884-5p2351314412351314477mer-m8235131440235131462146.00-21.96
CAediting_146471chr1_235131501_-ENSG00000188739.13ENST00000408888hsa-miR-6771-3p2351314972351315037mer-m8235131496235131515147.00-19.05

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_146470chr1_235131451_-ENSG00000188739.13ENST00000408888hsa-miR-31742351314492351314546mer235131448235131468142-22.5
CAediting_146469chr1_235131445_-ENSG00000188739.13ENST00000408888hsa-miR-377-5p2351314412351314477mer-m8235131440235131461155-19.35
CAediting_146469chr1_235131445_-ENSG00000188739.13ENST00000408888hsa-miR-60862351314412351314477mer-m8235131440235131459148-19
CAediting_146469chr1_235131445_-ENSG00000188739.13ENST00000408888hsa-miR-6516-5p2351314452351314517mer-m8235131444235131467145-14.71
CAediting_146467chr1_235131384_-ENSG00000188739.13ENST00000408888hsa-miR-6720-3p2351313792351313857mer-m8235131378235131399148-18.9
CAediting_146470chr1_235131451_-ENSG00000188739.13ENST00000408888hsa-miR-6807-5p2351314512351314577mer-m8235131450235131471144-19.38

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RBM34

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000408888.6protein_codingSoverviewSoverview
ENST00000486751.4retained_intronSoverviewSoverview
ENST00000485019.1processed_transcriptSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_146466ENST00000408888.6chr1_235131262_--611.90-611.90-618.20
CAediting_146467ENST00000408888.6chr1_235131384_--612.40-611.90-618.20
CAediting_146468ENST00000408888.6chr1_235131425_--616.40-611.90-618.20
CAediting_146469ENST00000408888.6chr1_235131445_--613.80-611.90-618.20
CAediting_146470ENST00000408888.6chr1_235131451_--611.90-611.90-618.20
CAediting_146471ENST00000408888.6chr1_235131501_--611.90-611.90-618.20
CAediting_146753ENST00000486751.4chr1_235160176_--215.00-210.40-215.90
CAediting_146754ENST00000486751.4chr1_235160200_--210.40-210.40-215.90
CAediting_146755ENST00000486751.4chr1_235160232_--210.70-210.40-215.90
CAediting_146756ENST00000486751.4chr1_235160250_--211.00-210.40-215.90
CAediting_146754ENST00000485019.1chr1_235160200_--111.20-110.50-112.90
CAediting_146755ENST00000485019.1chr1_235160232_--110.10-110.50-112.90

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Relation with ADAR for RBM34

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_146514chr1_235133289_-0.0008432312399190580.379869343135072....

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Relation with cancer stages for RBM34

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for RBM34

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for RBM34

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for RBM34

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource