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Editing gene: CNOT1 (CAeditome ID:23019)

Gene summary for CNOT1

Gene summary

Gene information	Gene symbol	CNOT1
	Gene ID	23019
	Gene name	CCR4-NOT transcription complex subunit 1
	Synonyms	AD-005\|CDC39\|HPE12\|NOT1\|NOT1H\|VIBOS
	Cytomap	16q21
	Type of gene	protein-coding
	Description	CCR4-NOT transcription complex subunit 1CCR4-associated factor 1NOT1 (negative regulator of transcription 1, yeast) homologadrenal gland protein AD-005negative regulator of transcription subunit 1 homolog
	Modification date	20210518
	UniProtAcc	A5YKK6
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CNOT1	GO:0004535	CCR4-NOT transcription complex subunit 1	21976065
CNOT1	GO:0030331	CCR4-NOT transcription complex subunit 1	16778766
CNOT1	GO:0042974	CCR4-NOT transcription complex subunit 1	16778766
CNOT1	GO:0060090	CCR4-NOT transcription complex subunit 1	22977175
CNOT1	GO:0000122	CCR4-NOT transcription complex subunit 1	16778766
CNOT1	GO:0010606	CCR4-NOT transcription complex subunit 1	21976065
CNOT1	GO:0017148	CCR4-NOT transcription complex subunit 1	24736845
CNOT1	GO:0033147	CCR4-NOT transcription complex subunit 1	16778766
CNOT1	GO:0035195	CCR4-NOT transcription complex subunit 1	23172285
CNOT1	GO:0035195	CCR4-NOT transcription complex subunit 1	24768540
CNOT1	GO:0048387	CCR4-NOT transcription complex subunit 1	16778766
CNOT1	GO:0060213	CCR4-NOT transcription complex subunit 1	23644599
CNOT1	GO:0000932	CCR4-NOT transcription complex subunit 1	21976065
CNOT1	GO:0005829	CCR4-NOT transcription complex subunit 1	0000052
CNOT1	GO:0030014	CCR4-NOT transcription complex subunit 1	19558367

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RNA A-to-I events for CNOT1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000125107.15

RNA A-to-I editing events in Cancer.

CAediting_1118947(58521242, -), CAediting_1118948(58521851, -), CAediting_1118949(58522041, -), CAediting_1118950(58522054, -), CAediting_1118951(58526734, -), CAediting_1118952(58530613, -), CAediting_1118953(58533690, -), CAediting_1118954(58541199, -), CAediting_1118955(58542825, -), CAediting_1118956(58542984, -), CAediting_1118957(58543057, -), CAediting_1118958(58543072, -), CAediting_1118959(58562388, -), CAediting_1118960(58564914, -), CAediting_1118961(58565184, -), CAediting_1118962(58565205, -), CAediting_1118963(58565228, -), CAediting_1118964(58565245, -), CAediting_1118965(58565276, -), CAediting_1118966(58565374, -), CAediting_1118967(58568200, -), CAediting_1118968(58569180, -), CAediting_1118969(58569277, -), CAediting_1118970(58569298, -), CAediting_1118971(58569300, -), CAediting_1118972(58569301, -), CAediting_1118973(58569302, -), CAediting_1118974(58569305, -), CAediting_1118975(58569309, -), CAediting_1118976(58569319, -), CAediting_1118977(58569373, -), CAediting_1118978(58569413, -), CAediting_1118979(58570514, -), CAediting_1118980(58570527, -), CAediting_1118981(58570612, -), CAediting_1118982(58571339, -), CAediting_1118983(58571373, -), CAediting_1118984(58571441, -), CAediting_1118985(58573194, -), CAediting_1118986(58573613, -), CAediting_1118987(58573619, -), CAediting_1118988(58573641, -), CAediting_1118989(58573645, -), CAediting_1118990(58573686, -), CAediting_1118991(58573702, -), CAediting_1118992(58573753, -), CAediting_1118993(58574240, -), CAediting_1118994(58575554, -), CAediting_1118995(58576168, -), CAediting_1118996(58576207, -), CAediting_1118997(58576208, -), CAediting_1118998(58576216, -), CAediting_1118999(58576222, -), CAediting_1119000(58576235, -), CAediting_1119001(58576243, -), CAediting_1119002(58576248, -), CAediting_1119003(58576249, -), CAediting_1119004(58576274, -), CAediting_1119005(58576277, -), CAediting_1119006(58576283, -), CAediting_1119007(58576286, -), CAediting_1119008(58576287, -), CAediting_1119009(58576288, -), CAediting_1119010(58576289, -), CAediting_1119011(58576292, -), CAediting_1119012(58576298, -), CAediting_1119013(58576303, -), CAediting_1119014(58576304, -), CAediting_1119015(58576305, -), CAediting_1119016(58576335, -), CAediting_1119017(58576339, -), CAediting_1119018(58576344, -), CAediting_1119019(58576345, -), CAediting_1119020(58576378, -), CAediting_1119021(58576383, -), CAediting_1119022(58576384, -), CAediting_1119023(58581724, -), CAediting_1119024(58581729, -), CAediting_1119025(58581753, -), CAediting_1119026(58581799, -), CAediting_1119027(58581800, -), CAediting_1119028(58581856, -), CAediting_1119029(58583676, -), CAediting_1119030(58583677, -), CAediting_1119031(58583732, -), CAediting_1119032(58583733, -), CAediting_1119033(58583743, -), CAediting_1119034(58584365, -), CAediting_1119035(58600153, -), CAediting_1119036(58600165, -), CAediting_1119037(58600232, -), CAediting_1119038(58600248, -), CAediting_1119039(58600262, -), CAediting_1119040(58600265, -), CAediting_1119041(58601083, -), CAediting_1119042(58601087, -), CAediting_1119043(58601092, -), CAediting_1119044(58601093, -), CAediting_1119045(58601119, -), CAediting_1119046(58601205, -), CAediting_1119047(58601262, -), CAediting_1119048(58601291, -), CAediting_1119049(58601293, -), CAediting_1119050(58601294, -), CAediting_1119051(58602096, -), CAediting_1119052(58602121, -), CAediting_1119053(58602137, -), CAediting_1119054(58602197, -), CAediting_1119055(58602429, -), CAediting_1119056(58603312, -), CAediting_1119057(58603343, -), CAediting_1119058(58605024, -), CAediting_1119059(58605738, -), CAediting_1119060(58605779, -), CAediting_1119061(58605783, -), CAediting_1119062(58605797, -), CAediting_1119063(58605810, -), CAediting_1119064(58605852, -), CAediting_1119065(58605853, -), CAediting_1119066(58605920, -), CAediting_1119067(58605928, -), CAediting_1119068(58606766, -), CAediting_1119069(58607570, -), CAediting_1119070(58607604, -), CAediting_1119071(58607626, -), CAediting_1119072(58607686, -), CAediting_1119073(58607691, -), CAediting_1119074(58609129, -), CAediting_1119075(58609206, -), CAediting_1119076(58609272, -), CAediting_1119077(58609350, -), CAediting_1119078(58609555, -), CAediting_1119079(58609565, -), CAediting_1119080(58609578, -), CAediting_1119081(58609579, -), CAediting_1119082(58609619, -), CAediting_1119083(58609662, -), CAediting_1119084(58609681, -), CAediting_1119085(58609690, -), CAediting_1119086(58610226, -), CAediting_1119087(58610235, -), CAediting_1119088(58610954, -), CAediting_1119089(58611011, -), CAediting_1119090(58611024, -), CAediting_1119091(58611343, -), CAediting_1119092(58612071, -), CAediting_1119093(58612084, -), CAediting_1119094(58612107, -), CAediting_1119095(58612522, -), CAediting_1119096(58612547, -), CAediting_1119097(58612573, -), CAediting_1119098(58612627, -), CAediting_1119099(58612639, -), CAediting_1119100(58612656, -), CAediting_1119101(58612682, -), CAediting_1119102(58613074, -), CAediting_1119103(58613100, -), CAediting_1119104(58613110, -), CAediting_1119105(58613252, -), CAediting_1119106(58613253, -), CAediting_1119107(58614864, -), CAediting_1119108(58615002, -), CAediting_1119109(58615825, -), CAediting_1119110(58615864, -), CAediting_1119111(58615963, -), CAediting_1119112(58615964, -), CAediting_1119113(58615971, -), CAediting_1119114(58616001, -), CAediting_1119115(58616005, -), CAediting_1119116(58616033, -), CAediting_1119117(58616538, -), CAediting_1119118(58617115, -), CAediting_1119119(58617116, -), CAediting_1119120(58617117, -), CAediting_1119121(58617150, -), CAediting_1119122(58617293, -), CAediting_1119123(58617813, -), CAediting_1119124(58617834, -), CAediting_1119125(58617893, -), CAediting_1119126(58617945, -), CAediting_1119127(58617946, -), CAediting_1119128(58617954, -), CAediting_1119129(58617984, -), CAediting_1119130(58618349, -), CAediting_1119131(58618433, -), CAediting_1119132(58618948, -), CAediting_1119133(58619075, -), CAediting_1119134(58619118, -), CAediting_1119135(58619119, -), CAediting_1119136(58619157, -), CAediting_1119137(58619191, -), CAediting_1119138(58619193, -), CAediting_1119139(58619524, -), CAediting_1119140(58619539, -), CAediting_1119141(58619543, -), CAediting_1119142(58619556, -), CAediting_1119143(58619560, -), CAediting_1119144(58619596, -), CAediting_1119145(58619599, -), CAediting_1119146(58619601, -), CAediting_1119147(58619604, -), CAediting_1119148(58619608, -), CAediting_1119149(58619619, -), CAediting_1119150(58619629, -), CAediting_1119151(58619644, -), CAediting_1119152(58619645, -), CAediting_1119153(58619653, -), CAediting_1119154(58619657, -), CAediting_1119155(58619696, -), CAediting_1119156(58619697, -), CAediting_1119157(58619705, -), CAediting_1119158(58619719, -), CAediting_1119159(58620384, -), CAediting_1119160(58620396, -), CAediting_1119161(58620397, -), CAediting_1119162(58620475, -), CAediting_1119163(58620561, -), CAediting_1119164(58621112, -), CAediting_1119165(58621155, -), CAediting_1119166(58621156, -), CAediting_1119167(58621163, -), CAediting_1119168(58621165, -), CAediting_1119169(58621180, -), CAediting_1119170(58621189, -), CAediting_1119171(58621194, -), CAediting_1119172(58621195, -), CAediting_1119173(58621203, -), CAediting_1119174(58621244, -), CAediting_1119175(58621339, -), CAediting_1119176(58621411, -), CAediting_1119177(58621751, -), CAediting_1119178(58622190, -), CAediting_1119179(58622192, -), CAediting_1119180(58622201, -), CAediting_1119181(58622202, -), CAediting_1119182(58622205, -), CAediting_1119183(58622602, -), CAediting_1119184(58622612, -), CAediting_1119185(58622725, -), CAediting_1119186(58623013, -), CAediting_1119187(58623076, -), CAediting_1119188(58623135, -), CAediting_1119189(58623754, -), CAediting_1119190(58623882, -), CAediting_1119191(58624542, -), CAediting_1119192(58624556, -), CAediting_1119193(58624660, -), CAediting_1119194(58624674, -), CAediting_1119195(58624676, -), CAediting_1119196(58624686, -), CAediting_1119197(58624715, -), CAediting_1119198(58624716, -), CAediting_1119199(58624722, -), CAediting_1119200(58624797, -), CAediting_1119201(58625562, -), CAediting_1119202(58626896, -), CAediting_1119203(58626903, -), CAediting_1119204(58626908, -), CAediting_1119205(58626921, -), CAediting_1119206(58627340, -), CAediting_1119207(58627346, -), CAediting_1119208(58628060, -), CAediting_1119209(58628062, -),

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RNA editing positional annotations for CNOT1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1118947	chr16_58521242_-	exonic
CAediting_1118948	chr16_58521851_-	ncRNA_intronic
CAediting_1118949	chr16_58522041_-	ncRNA_intronic
CAediting_1118950	chr16_58522054_-	ncRNA_intronic
CAediting_1118951	chr16_58526734_-	ncRNA_intronic
CAediting_1118952	chr16_58530613_-	ncRNA_exonic
CAediting_1118953	chr16_58533690_-	intronic
CAediting_1118954	chr16_58541199_-	intronic
CAediting_1118955	chr16_58542825_-	intronic
CAediting_1118956	chr16_58542984_-	intronic
CAediting_1118957	chr16_58543057_-	intronic
CAediting_1118958	chr16_58543072_-	intronic
CAediting_1118959	chr16_58562388_-	intronic
CAediting_1118960	chr16_58564914_-	intronic
CAediting_1118961	chr16_58565184_-	intronic
CAediting_1118962	chr16_58565205_-	intronic
CAediting_1118963	chr16_58565228_-	intronic
CAediting_1118964	chr16_58565245_-	intronic
CAediting_1118965	chr16_58565276_-	intronic
CAediting_1118966	chr16_58565374_-	intronic
CAediting_1118967	chr16_58568200_-	intronic
CAediting_1118968	chr16_58569180_-	intronic
CAediting_1118969	chr16_58569277_-	intronic
CAediting_1118970	chr16_58569298_-	intronic
CAediting_1118971	chr16_58569300_-	intronic
CAediting_1118972	chr16_58569301_-	intronic
CAediting_1118973	chr16_58569302_-	intronic
CAediting_1118974	chr16_58569305_-	intronic
CAediting_1118975	chr16_58569309_-	intronic
CAediting_1118976	chr16_58569319_-	intronic
CAediting_1118977	chr16_58569373_-	intronic
CAediting_1118978	chr16_58569413_-	intronic
CAediting_1118979	chr16_58570514_-	intronic
CAediting_1118980	chr16_58570527_-	intronic
CAediting_1118981	chr16_58570612_-	intronic
CAediting_1118982	chr16_58571339_-	intronic
CAediting_1118983	chr16_58571373_-	intronic
CAediting_1118984	chr16_58571441_-	intronic
CAediting_1118985	chr16_58573194_-	intronic
CAediting_1118986	chr16_58573613_-	intronic
CAediting_1118987	chr16_58573619_-	intronic
CAediting_1118988	chr16_58573641_-	intronic
CAediting_1118989	chr16_58573645_-	intronic
CAediting_1118990	chr16_58573686_-	intronic
CAediting_1118991	chr16_58573702_-	intronic
CAediting_1118992	chr16_58573753_-	intronic
CAediting_1118993	chr16_58574240_-	intronic
CAediting_1118994	chr16_58575554_-	intronic
CAediting_1118995	chr16_58576168_-	intronic
CAediting_1118996	chr16_58576207_-	intronic
CAediting_1118997	chr16_58576208_-	intronic
CAediting_1118998	chr16_58576216_-	intronic
CAediting_1118999	chr16_58576222_-	intronic
CAediting_1119000	chr16_58576235_-	intronic
CAediting_1119001	chr16_58576243_-	intronic
CAediting_1119002	chr16_58576248_-	intronic
CAediting_1119003	chr16_58576249_-	intronic
CAediting_1119004	chr16_58576274_-	intronic
CAediting_1119005	chr16_58576277_-	intronic
CAediting_1119006	chr16_58576283_-	intronic
CAediting_1119007	chr16_58576286_-	intronic
CAediting_1119008	chr16_58576287_-	intronic
CAediting_1119009	chr16_58576288_-	intronic
CAediting_1119010	chr16_58576289_-	intronic
CAediting_1119011	chr16_58576292_-	intronic
CAediting_1119012	chr16_58576298_-	intronic
CAediting_1119013	chr16_58576303_-	intronic
CAediting_1119014	chr16_58576304_-	intronic
CAediting_1119015	chr16_58576305_-	intronic
CAediting_1119016	chr16_58576335_-	intronic
CAediting_1119017	chr16_58576339_-	intronic
CAediting_1119018	chr16_58576344_-	intronic
CAediting_1119019	chr16_58576345_-	intronic
CAediting_1119020	chr16_58576378_-	intronic
CAediting_1119021	chr16_58576383_-	intronic
CAediting_1119022	chr16_58576384_-	intronic
CAediting_1119023	chr16_58581724_-	intronic
CAediting_1119024	chr16_58581729_-	intronic
CAediting_1119025	chr16_58581753_-	intronic
CAediting_1119026	chr16_58581799_-	intronic
CAediting_1119027	chr16_58581800_-	intronic
CAediting_1119028	chr16_58581856_-	intronic
CAediting_1119029	chr16_58583676_-	intronic
CAediting_1119030	chr16_58583677_-	intronic
CAediting_1119031	chr16_58583732_-	intronic
CAediting_1119032	chr16_58583733_-	intronic
CAediting_1119033	chr16_58583743_-	intronic
CAediting_1119034	chr16_58584365_-	intronic
CAediting_1119035	chr16_58600153_-	ncRNA_intronic
CAediting_1119036	chr16_58600165_-	ncRNA_intronic
CAediting_1119037	chr16_58600232_-	ncRNA_intronic
CAediting_1119038	chr16_58600248_-	ncRNA_intronic
CAediting_1119039	chr16_58600262_-	ncRNA_intronic
CAediting_1119040	chr16_58600265_-	ncRNA_intronic
CAediting_1119041	chr16_58601083_-	ncRNA_intronic
CAediting_1119042	chr16_58601087_-	ncRNA_intronic
CAediting_1119043	chr16_58601092_-	ncRNA_intronic
CAediting_1119044	chr16_58601093_-	ncRNA_intronic
CAediting_1119045	chr16_58601119_-	ncRNA_intronic
CAediting_1119046	chr16_58601205_-	ncRNA_intronic
CAediting_1119047	chr16_58601262_-	ncRNA_intronic
CAediting_1119048	chr16_58601291_-	ncRNA_intronic
CAediting_1119049	chr16_58601293_-	ncRNA_intronic
CAediting_1119050	chr16_58601294_-	ncRNA_intronic
CAediting_1119051	chr16_58602096_-	ncRNA_intronic
CAediting_1119052	chr16_58602121_-	ncRNA_intronic
CAediting_1119053	chr16_58602137_-	ncRNA_intronic
CAediting_1119054	chr16_58602197_-	ncRNA_intronic
CAediting_1119055	chr16_58602429_-	ncRNA_intronic
CAediting_1119056	chr16_58603312_-	ncRNA_intronic
CAediting_1119057	chr16_58603343_-	ncRNA_intronic
CAediting_1119058	chr16_58605024_-	ncRNA_intronic
CAediting_1119059	chr16_58605738_-	ncRNA_intronic
CAediting_1119060	chr16_58605779_-	ncRNA_intronic
CAediting_1119061	chr16_58605783_-	ncRNA_intronic
CAediting_1119062	chr16_58605797_-	ncRNA_intronic
CAediting_1119063	chr16_58605810_-	ncRNA_intronic
CAediting_1119064	chr16_58605852_-	ncRNA_intronic
CAediting_1119065	chr16_58605853_-	ncRNA_intronic
CAediting_1119066	chr16_58605920_-	ncRNA_intronic
CAediting_1119067	chr16_58605928_-	ncRNA_intronic
CAediting_1119068	chr16_58606766_-	ncRNA_intronic
CAediting_1119069	chr16_58607570_-	ncRNA_intronic
CAediting_1119070	chr16_58607604_-	ncRNA_intronic
CAediting_1119071	chr16_58607626_-	ncRNA_intronic
CAediting_1119072	chr16_58607686_-	ncRNA_intronic
CAediting_1119073	chr16_58607691_-	ncRNA_intronic
CAediting_1119074	chr16_58609129_-	ncRNA_intronic
CAediting_1119075	chr16_58609206_-	ncRNA_intronic
CAediting_1119076	chr16_58609272_-	ncRNA_intronic
CAediting_1119077	chr16_58609350_-	ncRNA_intronic
CAediting_1119078	chr16_58609555_-	ncRNA_intronic
CAediting_1119079	chr16_58609565_-	ncRNA_intronic
CAediting_1119080	chr16_58609578_-	ncRNA_intronic
CAediting_1119081	chr16_58609579_-	ncRNA_intronic
CAediting_1119082	chr16_58609619_-	ncRNA_intronic
CAediting_1119083	chr16_58609662_-	ncRNA_intronic
CAediting_1119084	chr16_58609681_-	ncRNA_intronic
CAediting_1119085	chr16_58609690_-	ncRNA_intronic
CAediting_1119086	chr16_58610226_-	ncRNA_intronic
CAediting_1119087	chr16_58610235_-	ncRNA_intronic
CAediting_1119088	chr16_58610954_-	ncRNA_intronic
CAediting_1119089	chr16_58611011_-	ncRNA_intronic
CAediting_1119090	chr16_58611024_-	ncRNA_intronic
CAediting_1119091	chr16_58611343_-	ncRNA_intronic
CAediting_1119092	chr16_58612071_-	ncRNA_intronic
CAediting_1119093	chr16_58612084_-	ncRNA_intronic
CAediting_1119094	chr16_58612107_-	ncRNA_intronic
CAediting_1119095	chr16_58612522_-	ncRNA_intronic
CAediting_1119096	chr16_58612547_-	ncRNA_intronic
CAediting_1119097	chr16_58612573_-	ncRNA_intronic
CAediting_1119098	chr16_58612627_-	ncRNA_intronic
CAediting_1119099	chr16_58612639_-	ncRNA_intronic
CAediting_1119100	chr16_58612656_-	ncRNA_intronic
CAediting_1119101	chr16_58612682_-	ncRNA_intronic
CAediting_1119102	chr16_58613074_-	ncRNA_intronic
CAediting_1119103	chr16_58613100_-	ncRNA_intronic
CAediting_1119104	chr16_58613110_-	ncRNA_intronic
CAediting_1119105	chr16_58613252_-	ncRNA_intronic
CAediting_1119106	chr16_58613253_-	ncRNA_intronic
CAediting_1119107	chr16_58614864_-	ncRNA_intronic
CAediting_1119108	chr16_58615002_-	ncRNA_intronic
CAediting_1119109	chr16_58615825_-	ncRNA_intronic
CAediting_1119110	chr16_58615864_-	ncRNA_intronic
CAediting_1119111	chr16_58615963_-	ncRNA_intronic
CAediting_1119112	chr16_58615964_-	ncRNA_intronic
CAediting_1119113	chr16_58615971_-	ncRNA_intronic
CAediting_1119114	chr16_58616001_-	ncRNA_intronic
CAediting_1119115	chr16_58616005_-	ncRNA_intronic
CAediting_1119116	chr16_58616033_-	ncRNA_intronic
CAediting_1119117	chr16_58616538_-	ncRNA_intronic
CAediting_1119118	chr16_58617115_-	ncRNA_intronic
CAediting_1119119	chr16_58617116_-	ncRNA_intronic
CAediting_1119120	chr16_58617117_-	ncRNA_intronic
CAediting_1119121	chr16_58617150_-	ncRNA_intronic
CAediting_1119122	chr16_58617293_-	ncRNA_intronic
CAediting_1119123	chr16_58617813_-	ncRNA_intronic
CAediting_1119124	chr16_58617834_-	ncRNA_intronic
CAediting_1119125	chr16_58617893_-	ncRNA_intronic
CAediting_1119126	chr16_58617945_-	ncRNA_intronic
CAediting_1119127	chr16_58617946_-	ncRNA_intronic
CAediting_1119128	chr16_58617954_-	ncRNA_intronic
CAediting_1119129	chr16_58617984_-	ncRNA_intronic
CAediting_1119130	chr16_58618349_-	ncRNA_intronic
CAediting_1119131	chr16_58618433_-	ncRNA_intronic
CAediting_1119132	chr16_58618948_-	ncRNA_intronic
CAediting_1119133	chr16_58619075_-	ncRNA_intronic
CAediting_1119134	chr16_58619118_-	ncRNA_intronic
CAediting_1119135	chr16_58619119_-	ncRNA_intronic
CAediting_1119136	chr16_58619157_-	ncRNA_intronic
CAediting_1119137	chr16_58619191_-	ncRNA_intronic
CAediting_1119138	chr16_58619193_-	ncRNA_intronic
CAediting_1119139	chr16_58619524_-	ncRNA_intronic
CAediting_1119140	chr16_58619539_-	ncRNA_intronic
CAediting_1119141	chr16_58619543_-	ncRNA_intronic
CAediting_1119142	chr16_58619556_-	ncRNA_intronic
CAediting_1119143	chr16_58619560_-	ncRNA_intronic
CAediting_1119144	chr16_58619596_-	ncRNA_intronic
CAediting_1119145	chr16_58619599_-	ncRNA_intronic
CAediting_1119146	chr16_58619601_-	ncRNA_intronic
CAediting_1119147	chr16_58619604_-	ncRNA_intronic
CAediting_1119148	chr16_58619608_-	ncRNA_intronic
CAediting_1119149	chr16_58619619_-	ncRNA_intronic
CAediting_1119150	chr16_58619629_-	ncRNA_intronic
CAediting_1119151	chr16_58619644_-	ncRNA_intronic
CAediting_1119152	chr16_58619645_-	ncRNA_intronic
CAediting_1119153	chr16_58619653_-	ncRNA_intronic
CAediting_1119154	chr16_58619657_-	ncRNA_intronic
CAediting_1119155	chr16_58619696_-	ncRNA_intronic
CAediting_1119156	chr16_58619697_-	ncRNA_intronic
CAediting_1119157	chr16_58619705_-	ncRNA_intronic
CAediting_1119158	chr16_58619719_-	ncRNA_intronic
CAediting_1119159	chr16_58620384_-	ncRNA_intronic
CAediting_1119160	chr16_58620396_-	ncRNA_intronic
CAediting_1119161	chr16_58620397_-	ncRNA_intronic
CAediting_1119162	chr16_58620475_-	ncRNA_intronic
CAediting_1119163	chr16_58620561_-	ncRNA_intronic
CAediting_1119164	chr16_58621112_-	ncRNA_intronic
CAediting_1119165	chr16_58621155_-	ncRNA_intronic
CAediting_1119166	chr16_58621156_-	ncRNA_intronic
CAediting_1119167	chr16_58621163_-	ncRNA_intronic
CAediting_1119168	chr16_58621165_-	ncRNA_intronic
CAediting_1119169	chr16_58621180_-	ncRNA_intronic
CAediting_1119170	chr16_58621189_-	ncRNA_intronic
CAediting_1119171	chr16_58621194_-	ncRNA_intronic
CAediting_1119172	chr16_58621195_-	ncRNA_intronic
CAediting_1119173	chr16_58621203_-	ncRNA_intronic
CAediting_1119174	chr16_58621244_-	ncRNA_intronic
CAediting_1119175	chr16_58621339_-	ncRNA_intronic
CAediting_1119176	chr16_58621411_-	ncRNA_intronic
CAediting_1119177	chr16_58621751_-	ncRNA_intronic
CAediting_1119178	chr16_58622190_-	ncRNA_intronic
CAediting_1119179	chr16_58622192_-	ncRNA_intronic
CAediting_1119180	chr16_58622201_-	ncRNA_intronic
CAediting_1119181	chr16_58622202_-	ncRNA_intronic
CAediting_1119182	chr16_58622205_-	ncRNA_intronic
CAediting_1119183	chr16_58622602_-	ncRNA_intronic
CAediting_1119184	chr16_58622612_-	ncRNA_intronic
CAediting_1119185	chr16_58622725_-	ncRNA_intronic
CAediting_1119186	chr16_58623013_-	ncRNA_intronic
CAediting_1119187	chr16_58623076_-	ncRNA_intronic
CAediting_1119188	chr16_58623135_-	ncRNA_intronic
CAediting_1119189	chr16_58623754_-	ncRNA_intronic
CAediting_1119190	chr16_58623882_-	ncRNA_intronic
CAediting_1119191	chr16_58624542_-	ncRNA_intronic
CAediting_1119192	chr16_58624556_-	ncRNA_intronic
CAediting_1119193	chr16_58624660_-	ncRNA_exonic
CAediting_1119194	chr16_58624674_-	ncRNA_exonic
CAediting_1119195	chr16_58624676_-	ncRNA_exonic
CAediting_1119196	chr16_58624686_-	ncRNA_exonic
CAediting_1119197	chr16_58624715_-	ncRNA_exonic
CAediting_1119198	chr16_58624716_-	ncRNA_exonic
CAediting_1119199	chr16_58624722_-	ncRNA_exonic
CAediting_1119200	chr16_58624797_-	ncRNA_intronic
CAediting_1119201	chr16_58625562_-	ncRNA_intronic
CAediting_1119202	chr16_58626896_-	ncRNA_intronic
CAediting_1119203	chr16_58626903_-	ncRNA_intronic
CAediting_1119204	chr16_58626908_-	ncRNA_intronic
CAediting_1119205	chr16_58626921_-	ncRNA_intronic
CAediting_1119206	chr16_58627340_-	ncRNA_intronic
CAediting_1119207	chr16_58627346_-	ncRNA_intronic
CAediting_1119208	chr16_58628060_-	ncRNA_intronic
CAediting_1119209	chr16_58628062_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1118948	chr16_58521851_-	SINE	Alu	AluSx
CAediting_1118949	chr16_58522041_-	SINE	Alu	AluSg7
CAediting_1118950	chr16_58522054_-	SINE	Alu	AluSg7
CAediting_1118951	chr16_58526734_-	SINE	Alu	AluSp
CAediting_1118952	chr16_58530613_-	SINE	Alu	AluSq
CAediting_1118953	chr16_58533690_-	SINE	Alu	AluYc
CAediting_1118954	chr16_58541199_-	SINE	Alu	AluJb
CAediting_1118955	chr16_58542825_-	SINE	Alu	AluSz6
CAediting_1118956	chr16_58542984_-	SINE	Alu	AluSz6
CAediting_1118957	chr16_58543057_-	SINE	Alu	AluSz6
CAediting_1118958	chr16_58543072_-	SINE	Alu	AluSz6
CAediting_1118959	chr16_58562388_-	SINE	Alu	AluJr
CAediting_1118960	chr16_58564914_-	SINE	Alu	AluSq2
CAediting_1118961	chr16_58565184_-	SINE	Alu	AluJo
CAediting_1118962	chr16_58565205_-	SINE	Alu	AluJo
CAediting_1118963	chr16_58565228_-	SINE	Alu	AluJo
CAediting_1118964	chr16_58565245_-	SINE	Alu	AluJo
CAediting_1118965	chr16_58565276_-	SINE	Alu	AluJo
CAediting_1118966	chr16_58565374_-	SINE	Alu	AluJo
CAediting_1118967	chr16_58568200_-	SINE	Alu	AluSp
CAediting_1118968	chr16_58569180_-	SINE	Alu	AluSz6
CAediting_1118969	chr16_58569277_-	SINE	Alu	AluSz6
CAediting_1118970	chr16_58569298_-	SINE	Alu	AluSz6
CAediting_1118971	chr16_58569300_-	SINE	Alu	AluSz6
CAediting_1118972	chr16_58569301_-	SINE	Alu	AluSz6
CAediting_1118973	chr16_58569302_-	SINE	Alu	AluSz6
CAediting_1118974	chr16_58569305_-	SINE	Alu	AluSz6
CAediting_1118975	chr16_58569309_-	SINE	Alu	AluSz6
CAediting_1118976	chr16_58569319_-	SINE	Alu	AluSz6
CAediting_1118977	chr16_58569373_-	SINE	Alu	AluSz6
CAediting_1118978	chr16_58569413_-	SINE	Alu	AluSz6
CAediting_1118979	chr16_58570514_-	SINE	Alu	AluJb
CAediting_1118980	chr16_58570527_-	SINE	Alu	AluJb
CAediting_1118981	chr16_58570612_-	SINE	Alu	AluJb
CAediting_1118982	chr16_58571339_-	SINE	Alu	AluSx
CAediting_1118983	chr16_58571373_-	SINE	Alu	AluSx
CAediting_1118984	chr16_58571441_-	SINE	Alu	AluSx
CAediting_1118985	chr16_58573194_-	SINE	Alu	AluSq
CAediting_1118986	chr16_58573613_-	SINE	Alu	AluY
CAediting_1118987	chr16_58573619_-	SINE	Alu	AluY
CAediting_1118988	chr16_58573641_-	SINE	Alu	AluY
CAediting_1118989	chr16_58573645_-	SINE	Alu	AluY
CAediting_1118990	chr16_58573686_-	SINE	Alu	AluY
CAediting_1118991	chr16_58573702_-	SINE	Alu	AluY
CAediting_1118992	chr16_58573753_-	SINE	Alu	AluY
CAediting_1118993	chr16_58574240_-	SINE	Alu	AluJo
CAediting_1118994	chr16_58575554_-	SINE	Alu	AluSx1
CAediting_1118995	chr16_58576168_-	SINE	Alu	AluSg
CAediting_1118996	chr16_58576207_-	SINE	Alu	AluSg
CAediting_1118997	chr16_58576208_-	SINE	Alu	AluSg
CAediting_1118998	chr16_58576216_-	SINE	Alu	AluSg
CAediting_1118999	chr16_58576222_-	SINE	Alu	AluSg
CAediting_1119000	chr16_58576235_-	SINE	Alu	AluSg
CAediting_1119001	chr16_58576243_-	SINE	Alu	AluSg
CAediting_1119002	chr16_58576248_-	SINE	Alu	AluSg
CAediting_1119003	chr16_58576249_-	SINE	Alu	AluSg
CAediting_1119004	chr16_58576274_-	SINE	Alu	AluSg
CAediting_1119005	chr16_58576277_-	SINE	Alu	AluSg
CAediting_1119006	chr16_58576283_-	SINE	Alu	AluSg
CAediting_1119007	chr16_58576286_-	SINE	Alu	AluSg
CAediting_1119008	chr16_58576287_-	SINE	Alu	AluSg
CAediting_1119009	chr16_58576288_-	SINE	Alu	AluSg
CAediting_1119010	chr16_58576289_-	SINE	Alu	AluSg
CAediting_1119011	chr16_58576292_-	SINE	Alu	AluSg
CAediting_1119012	chr16_58576298_-	SINE	Alu	AluSg
CAediting_1119013	chr16_58576303_-	SINE	Alu	AluSg
CAediting_1119014	chr16_58576304_-	SINE	Alu	AluSg
CAediting_1119015	chr16_58576305_-	SINE	Alu	AluSg
CAediting_1119016	chr16_58576335_-	SINE	Alu	AluSg
CAediting_1119017	chr16_58576339_-	SINE	Alu	AluSg
CAediting_1119018	chr16_58576344_-	SINE	Alu	AluSg
CAediting_1119019	chr16_58576345_-	SINE	Alu	AluSg
CAediting_1119020	chr16_58576378_-	SINE	Alu	AluSg
CAediting_1119021	chr16_58576383_-	SINE	Alu	AluSg
CAediting_1119022	chr16_58576384_-	SINE	Alu	AluSg
CAediting_1119023	chr16_58581724_-	SINE	Alu	AluSz6
CAediting_1119024	chr16_58581729_-	SINE	Alu	AluSz6
CAediting_1119025	chr16_58581753_-	SINE	Alu	AluSz6
CAediting_1119026	chr16_58581799_-	SINE	Alu	AluSz6
CAediting_1119027	chr16_58581800_-	SINE	Alu	AluSz6
CAediting_1119028	chr16_58581856_-	SINE	Alu	AluSz6
CAediting_1119029	chr16_58583676_-	SINE	Alu	AluSz
CAediting_1119030	chr16_58583677_-	SINE	Alu	AluSz
CAediting_1119031	chr16_58583732_-	SINE	Alu	AluSz
CAediting_1119032	chr16_58583733_-	SINE	Alu	AluSz
CAediting_1119033	chr16_58583743_-	SINE	Alu	AluSz
CAediting_1119034	chr16_58584365_-	SINE	Alu	AluSx
CAediting_1119035	chr16_58600153_-	SINE	Alu	AluSx1
CAediting_1119036	chr16_58600165_-	SINE	Alu	AluSx1
CAediting_1119037	chr16_58600232_-	SINE	Alu	AluSx1
CAediting_1119038	chr16_58600248_-	SINE	Alu	AluSx1
CAediting_1119039	chr16_58600262_-	SINE	Alu	AluSx1
CAediting_1119040	chr16_58600265_-	SINE	Alu	AluSx1
CAediting_1119041	chr16_58601083_-	SINE	Alu	AluSq2
CAediting_1119042	chr16_58601087_-	SINE	Alu	AluSq2
CAediting_1119043	chr16_58601092_-	SINE	Alu	AluSq2
CAediting_1119044	chr16_58601093_-	SINE	Alu	AluSq2
CAediting_1119045	chr16_58601119_-	SINE	Alu	AluSq2
CAediting_1119046	chr16_58601205_-	SINE	Alu	AluSq2
CAediting_1119047	chr16_58601262_-	SINE	Alu	AluSg
CAediting_1119048	chr16_58601291_-	SINE	Alu	AluSg
CAediting_1119049	chr16_58601293_-	SINE	Alu	AluSg
CAediting_1119050	chr16_58601294_-	SINE	Alu	AluSg
CAediting_1119051	chr16_58602096_-	SINE	Alu	AluSp
CAediting_1119052	chr16_58602121_-	SINE	Alu	AluSp
CAediting_1119053	chr16_58602137_-	SINE	Alu	AluSp
CAediting_1119054	chr16_58602197_-	SINE	Alu	AluSp
CAediting_1119055	chr16_58602429_-	SINE	Alu	AluJo
CAediting_1119056	chr16_58603312_-	SINE	Alu	AluJo
CAediting_1119057	chr16_58603343_-	SINE	Alu	AluJo
CAediting_1119058	chr16_58605024_-	SINE	Alu	AluY
CAediting_1119059	chr16_58605738_-	SINE	Alu	AluJb
CAediting_1119060	chr16_58605779_-	SINE	Alu	AluJb
CAediting_1119061	chr16_58605783_-	SINE	Alu	AluJb
CAediting_1119062	chr16_58605797_-	SINE	Alu	AluJb
CAediting_1119063	chr16_58605810_-	SINE	Alu	AluJb
CAediting_1119064	chr16_58605852_-	SINE	Alu	AluJb
CAediting_1119065	chr16_58605853_-	SINE	Alu	AluJb
CAediting_1119066	chr16_58605920_-	SINE	Alu	AluJb
CAediting_1119067	chr16_58605928_-	SINE	Alu	AluJb
CAediting_1119068	chr16_58606766_-	SINE	Alu	AluSx1
CAediting_1119069	chr16_58607570_-	SINE	Alu	AluSp
CAediting_1119070	chr16_58607604_-	SINE	Alu	AluSp
CAediting_1119071	chr16_58607626_-	SINE	Alu	AluSp
CAediting_1119072	chr16_58607686_-	SINE	Alu	AluSp
CAediting_1119073	chr16_58607691_-	SINE	Alu	AluSp
CAediting_1119074	chr16_58609129_-	SINE	Alu	AluSg
CAediting_1119075	chr16_58609206_-	SINE	Alu	AluSg
CAediting_1119076	chr16_58609272_-	SINE	Alu	AluSg
CAediting_1119077	chr16_58609350_-	SINE	Alu	AluSg
CAediting_1119078	chr16_58609555_-	SINE	Alu	AluJo
CAediting_1119079	chr16_58609565_-	SINE	Alu	AluJo
CAediting_1119080	chr16_58609578_-	SINE	Alu	AluJo
CAediting_1119081	chr16_58609579_-	SINE	Alu	AluJo
CAediting_1119082	chr16_58609619_-	SINE	Alu	AluJo
CAediting_1119083	chr16_58609662_-	SINE	Alu	AluJo
CAediting_1119084	chr16_58609681_-	SINE	Alu	AluJo
CAediting_1119085	chr16_58609690_-	SINE	Alu	AluJo
CAediting_1119086	chr16_58610226_-	SINE	Alu	AluSz6
CAediting_1119087	chr16_58610235_-	SINE	Alu	AluSz6
CAediting_1119088	chr16_58610954_-	SINE	Alu	AluSc8
CAediting_1119089	chr16_58611011_-	SINE	Alu	AluSc8
CAediting_1119090	chr16_58611024_-	SINE	Alu	AluSc8
CAediting_1119091	chr16_58611343_-	SINE	Alu	AluSx3
CAediting_1119092	chr16_58612071_-	SINE	Alu	FRAM
CAediting_1119093	chr16_58612084_-	SINE	Alu	FRAM
CAediting_1119094	chr16_58612107_-	SINE	Alu	FRAM
CAediting_1119095	chr16_58612522_-	SINE	Alu	AluSq2
CAediting_1119096	chr16_58612547_-	SINE	Alu	AluSq2
CAediting_1119097	chr16_58612573_-	SINE	Alu	AluSq2
CAediting_1119098	chr16_58612627_-	SINE	Alu	AluSq2
CAediting_1119099	chr16_58612639_-	SINE	Alu	AluSq2
CAediting_1119100	chr16_58612656_-	SINE	Alu	AluSq2
CAediting_1119101	chr16_58612682_-	SINE	Alu	AluSq2
CAediting_1119102	chr16_58613074_-	SINE	Alu	AluSx3
CAediting_1119103	chr16_58613100_-	SINE	Alu	AluSx3
CAediting_1119104	chr16_58613110_-	SINE	Alu	AluSx3
CAediting_1119105	chr16_58613252_-	SINE	Alu	AluSx3
CAediting_1119106	chr16_58613253_-	SINE	Alu	AluSx3
CAediting_1119107	chr16_58614864_-	SINE	Alu	AluSx3
CAediting_1119108	chr16_58615002_-	SINE	Alu	AluSx3
CAediting_1119109	chr16_58615825_-	SINE	Alu	AluJr4
CAediting_1119110	chr16_58615864_-	SINE	Alu	AluJr4
CAediting_1119111	chr16_58615963_-	SINE	Alu	AluJr4
CAediting_1119112	chr16_58615964_-	SINE	Alu	AluJr4
CAediting_1119113	chr16_58615971_-	SINE	Alu	AluJr4
CAediting_1119114	chr16_58616001_-	SINE	Alu	AluJr4
CAediting_1119115	chr16_58616005_-	SINE	Alu	AluJr4
CAediting_1119116	chr16_58616033_-	SINE	Alu	AluJr4
CAediting_1119117	chr16_58616538_-	SINE	Alu	AluJo
CAediting_1119118	chr16_58617115_-	SINE	Alu	AluJb
CAediting_1119119	chr16_58617116_-	SINE	Alu	AluJb
CAediting_1119120	chr16_58617117_-	SINE	Alu	AluJb
CAediting_1119121	chr16_58617150_-	SINE	Alu	AluJb
CAediting_1119122	chr16_58617293_-	SINE	Alu	AluJb
CAediting_1119123	chr16_58617813_-	SINE	Alu	AluJr4
CAediting_1119124	chr16_58617834_-	SINE	Alu	AluJr4
CAediting_1119125	chr16_58617893_-	SINE	Alu	AluJr4
CAediting_1119126	chr16_58617945_-	SINE	Alu	AluJr4
CAediting_1119127	chr16_58617946_-	SINE	Alu	AluJr4
CAediting_1119128	chr16_58617954_-	SINE	Alu	AluJr4
CAediting_1119129	chr16_58617984_-	SINE	Alu	AluJr4
CAediting_1119130	chr16_58618349_-	SINE	Alu	AluSx3
CAediting_1119131	chr16_58618433_-	SINE	Alu	AluSx3
CAediting_1119132	chr16_58618948_-	SINE	Alu	AluJr
CAediting_1119133	chr16_58619075_-	SINE	Alu	AluJr
CAediting_1119134	chr16_58619118_-	SINE	Alu	AluJr
CAediting_1119135	chr16_58619119_-	SINE	Alu	AluJr
CAediting_1119136	chr16_58619157_-	SINE	Alu	AluJr
CAediting_1119137	chr16_58619191_-	SINE	Alu	AluJr
CAediting_1119138	chr16_58619193_-	SINE	Alu	AluJr
CAediting_1119139	chr16_58619524_-	SINE	Alu	AluSx4
CAediting_1119140	chr16_58619539_-	SINE	Alu	AluSx4
CAediting_1119141	chr16_58619543_-	SINE	Alu	AluSx4
CAediting_1119142	chr16_58619556_-	SINE	Alu	AluSx4
CAediting_1119143	chr16_58619560_-	SINE	Alu	AluSx4
CAediting_1119144	chr16_58619596_-	SINE	Alu	AluSx4
CAediting_1119145	chr16_58619599_-	SINE	Alu	AluSx4
CAediting_1119146	chr16_58619601_-	SINE	Alu	AluSx4
CAediting_1119147	chr16_58619604_-	SINE	Alu	AluSx4
CAediting_1119148	chr16_58619608_-	SINE	Alu	AluSx4
CAediting_1119149	chr16_58619619_-	SINE	Alu	AluSx4
CAediting_1119150	chr16_58619629_-	SINE	Alu	AluSx4
CAediting_1119151	chr16_58619644_-	SINE	Alu	AluSx4
CAediting_1119152	chr16_58619645_-	SINE	Alu	AluSx4
CAediting_1119153	chr16_58619653_-	SINE	Alu	AluSx4
CAediting_1119154	chr16_58619657_-	SINE	Alu	AluSx4
CAediting_1119155	chr16_58619696_-	SINE	Alu	AluSx4
CAediting_1119156	chr16_58619697_-	SINE	Alu	AluSx4
CAediting_1119157	chr16_58619705_-	SINE	Alu	AluSx4
CAediting_1119159	chr16_58620384_-	SINE	Alu	AluSx1
CAediting_1119160	chr16_58620396_-	SINE	Alu	AluSx1
CAediting_1119161	chr16_58620397_-	SINE	Alu	AluSx1
CAediting_1119162	chr16_58620475_-	SINE	Alu	AluSx1
CAediting_1119163	chr16_58620561_-	SINE	Alu	AluSx1
CAediting_1119164	chr16_58621112_-	SINE	Alu	AluJb
CAediting_1119165	chr16_58621155_-	SINE	Alu	AluJb
CAediting_1119166	chr16_58621156_-	SINE	Alu	AluJb
CAediting_1119167	chr16_58621163_-	SINE	Alu	AluJb
CAediting_1119168	chr16_58621165_-	SINE	Alu	AluJb
CAediting_1119169	chr16_58621180_-	SINE	Alu	AluJb
CAediting_1119170	chr16_58621189_-	SINE	Alu	AluJb
CAediting_1119171	chr16_58621194_-	SINE	Alu	AluJb
CAediting_1119172	chr16_58621195_-	SINE	Alu	AluJb
CAediting_1119173	chr16_58621203_-	SINE	Alu	AluJb
CAediting_1119174	chr16_58621244_-	SINE	Alu	AluJb
CAediting_1119175	chr16_58621339_-	SINE	Alu	AluSp
CAediting_1119176	chr16_58621411_-	SINE	Alu	AluSp
CAediting_1119177	chr16_58621751_-	SINE	Alu	AluY
CAediting_1119178	chr16_58622190_-	SINE	Alu	AluY
CAediting_1119179	chr16_58622192_-	SINE	Alu	AluY
CAediting_1119180	chr16_58622201_-	SINE	Alu	AluY
CAediting_1119181	chr16_58622202_-	SINE	Alu	AluY
CAediting_1119182	chr16_58622205_-	SINE	Alu	AluY
CAediting_1119183	chr16_58622602_-	SINE	Alu	AluSq2
CAediting_1119184	chr16_58622612_-	SINE	Alu	AluSq2
CAediting_1119185	chr16_58622725_-	SINE	Alu	AluSq2
CAediting_1119186	chr16_58623013_-	SINE	Alu	AluSx1
CAediting_1119187	chr16_58623076_-	SINE	Alu	AluSx1
CAediting_1119188	chr16_58623135_-	SINE	Alu	AluSx1
CAediting_1119189	chr16_58623754_-	SINE	Alu	AluSz
CAediting_1119190	chr16_58623882_-	SINE	Alu	AluSz
CAediting_1119191	chr16_58624542_-	SINE	Alu	AluSg
CAediting_1119192	chr16_58624556_-	SINE	Alu	AluSg
CAediting_1119193	chr16_58624660_-	SINE	Alu	AluSg
CAediting_1119194	chr16_58624674_-	SINE	Alu	AluSg
CAediting_1119195	chr16_58624676_-	SINE	Alu	AluSg
CAediting_1119196	chr16_58624686_-	SINE	Alu	AluSg
CAediting_1119197	chr16_58624715_-	SINE	Alu	AluSg
CAediting_1119198	chr16_58624716_-	SINE	Alu	AluSg
CAediting_1119199	chr16_58624722_-	SINE	Alu	AluSg
CAediting_1119200	chr16_58624797_-	SINE	Alu	AluSg
CAediting_1119201	chr16_58625562_-	SINE	Alu	AluSz
CAediting_1119202	chr16_58626896_-	SINE	Alu	AluJb
CAediting_1119203	chr16_58626903_-	SINE	Alu	AluJb
CAediting_1119204	chr16_58626908_-	SINE	Alu	AluJb
CAediting_1119205	chr16_58626921_-	SINE	Alu	AluJb
CAediting_1119206	chr16_58627340_-	SINE	Alu	AluSc
CAediting_1119207	chr16_58627346_-	SINE	Alu	AluSc
CAediting_1119208	chr16_58628060_-	SINE	Alu	AluSx1
CAediting_1119209	chr16_58628062_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for CNOT1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1118960	chr16_58564914_-	58564906:58564928	3SS	0+6i	GTTTTTCTCTTGTTACCCAGGCT	6.96	GTTTTTCTCTTGTTGCCCAGGCT	6.57
ES	CAediting_1119194	chr16_58624674_-	58624666:58624674	5SS	3+0i	AGGCGCGTG	-24.6	GGGCGCGTG	-27.51
MEX_1	CAediting_1119194	chr16_58624674_-	58624666:58624674	5SS	3+0i	AGGCGCGTG	-24.6	GGGCGCGTG	-27.51
ES	CAediting_1119197	chr16_58624715_-	58624714:58624722	5SS	0+5i	AGGTTCAAG	-12.66	AGGTTCAGG	-5.91
MEX_1	CAediting_1119197	chr16_58624715_-	58624714:58624722	5SS	0+5i	AGGTTCAAG	-12.66	AGGTTCAGG	-5.91
ES	CAediting_1119198	chr16_58624716_-	58624714:58624722	5SS	0+4i	AGGTTCAAG	-12.66	AGGTTCGAG	-17.82
MEX_1	CAediting_1119198	chr16_58624716_-	58624714:58624722	5SS	0+4i	AGGTTCAAG	-12.66	AGGTTCGAG	-17.82
ES	CAediting_1119199	chr16_58624722_-	58624714:58624722	5SS	3+0i	AGGTTCAAG	-12.66	GGGTTCAAG	-15.39
MEX_1	CAediting_1119199	chr16_58624722_-	58624714:58624722	5SS	3+0i	AGGTTCAAG	-12.66	GGGTTCAAG	-15.39
ES	CAediting_1119200	chr16_58624797_-	58624792:58624814	3SS	0+3i	TTGTTTGTTTGTTTTTTAAGATG	8.61	TTGTTTGTTTGTTTTTTGAGATG	3.24
MEX_1	CAediting_1119200	chr16_58624797_-	58624792:58624814	3SS	0+3i	TTGTTTGTTTGTTTTTTAAGATG	8.61	TTGTTTGTTTGTTTTTTGAGATG	3.24

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000125107.15.CNOT1.

Correlation between RNA A-to-I editing and PSI for ENSG00000125107.15.CNOT1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CNOT1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CNOT1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CNOT1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1118947	chr16_58521242_-	ENSG00000125107.15	ENST00000567188	hsa-miR-2116-5p	58521239	58521245	7mer-m8	58521238	58521264	145.00	-18.50

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000125107.15	ENST00000317147	hsa-miR-548aa	58520670	58520676	7mer-m8	58520669	58520691	148	-9.84
CAediting_1399425	chr20_1392958_-	ENSG00000125107.15	ENST00000317147	hsa-miR-6869-5p	58520377	58520384	8mer-1a	58520377	58520398	149	-20.1
CAediting_1160181	chr17_7017644_-	ENSG00000125107.15	ENST00000567188	hsa-miR-195-3p	58526111	58526117	7mer-m8	58526110	58526131	153	-13.02
CAediting_1368054	chr19_46709310_-	ENSG00000125107.15	ENST00000567188	hsa-miR-320e	58525320	58525327	8mer-1a	58525320	58525340	148	-17.21

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1351755	chr19_40282625_-	ENSG00000125107.15	ENST00000317147	hsa-miR-641	58520573	58520579	7mer-m8	58520572	58520595	147	-17.3

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CNOT1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CNOT1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for CNOT1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for CNOT1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for CNOT1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CNOT1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
CNOT1	C0557874	Global developmental delay	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene