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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: FBXO21 (CAeditome ID:23014)

Gene summary for FBXO21

check button Gene summary
Gene informationGene symbol

FBXO21

Gene ID

23014

Gene nameF-box protein 21
SynonymsFBX21
Cytomap

12q24.22

Type of geneprotein-coding
DescriptionF-box only protein 21
Modification date20210518
UniProtAcc

O94952

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for FBXO21

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000135108.13

check button RNA A-to-I editing events in Cancer.
CAediting_932337(117147425, -), CAediting_932338(117154396, -), CAediting_932339(117154474, -), CAediting_932340(117154537, -), CAediting_932341(117163844, -), CAediting_932342(117163857, -), CAediting_932343(117163858, -), CAediting_932344(117163861, -), CAediting_932345(117163862, -), CAediting_932346(117163868, -), CAediting_932347(117163882, -), CAediting_932348(117163897, -), CAediting_932349(117164307, -), CAediting_932350(117164315, -), CAediting_932351(117164334, -), CAediting_932352(117164339, -), CAediting_932353(117164369, -), CAediting_932354(117164373, -), CAediting_932355(117164374, -), CAediting_932356(117164382, -), CAediting_932357(117164385, -), CAediting_932358(117164387, -), CAediting_932359(117164388, -), CAediting_932360(117164392, -), CAediting_932361(117164398, -), CAediting_932362(117164401, -), CAediting_932363(117164414, -), CAediting_932364(117164441, -), CAediting_932365(117164445, -), CAediting_932366(117164447, -), CAediting_932367(117164448, -), CAediting_932368(117164453, -), CAediting_932369(117164454, -), CAediting_932370(117164455, -), CAediting_932371(117164458, -), CAediting_932372(117164489, -), CAediting_932373(117164495, -), CAediting_932374(117164503, -), CAediting_932375(117164525, -), CAediting_932376(117173102, -), CAediting_932377(117180644, -), CAediting_932378(117180686, -), CAediting_932379(117180691, -), CAediting_932380(117180722, -), CAediting_932381(117180723, -), CAediting_932382(117180729, -), CAediting_932383(117180737, -), CAediting_932384(117180741, -), CAediting_932385(117180763, -), CAediting_932386(117180764, -), CAediting_932387(117180828, -), CAediting_932388(117180839, -), CAediting_932389(117181679, -), CAediting_932390(117181684, -), CAediting_932391(117181712, -), CAediting_932392(117181746, -), CAediting_932393(117181764, -), CAediting_932394(117181782, -), CAediting_932395(117181787, -), CAediting_932396(117181788, -), CAediting_932397(117181798, -), CAediting_932398(117181814, -), CAediting_932399(117181845, -), CAediting_932400(117181852, -), CAediting_932401(117181883, -), CAediting_932402(117181923, -), CAediting_932403(117181940, -), CAediting_932404(117182243, -), CAediting_932405(117182249, -), CAediting_932406(117182250, -), CAediting_932407(117182251, -), CAediting_932408(117182264, -), CAediting_932409(117182276, -), CAediting_932410(117182277, -), CAediting_932411(117182289, -), CAediting_932412(117182302, -), CAediting_932413(117182314, -), CAediting_932414(117182322, -), CAediting_932415(117182324, -), CAediting_932416(117182328, -), CAediting_932417(117182341, -), CAediting_932418(117182342, -), CAediting_932419(117182358, -), CAediting_932420(117182366, -), CAediting_932421(117182368, -), CAediting_932422(117182370, -), CAediting_932423(117182374, -), CAediting_932424(117182378, -), CAediting_932425(117182408, -), CAediting_932426(117182426, -), CAediting_932427(117182432, -), CAediting_932428(117182453, -), CAediting_932429(117182483, -), CAediting_932430(117182512, -), CAediting_932431(117182528, -), CAediting_932432(117182635, -), CAediting_932433(117182636, -), CAediting_932434(117182659, -), CAediting_932435(117182660, -), CAediting_932436(117182691, -), CAediting_932437(117182700, -), CAediting_932438(117182701, -), CAediting_932439(117182711, -), CAediting_932440(117182719, -), CAediting_932441(117182727, -), CAediting_932442(117182741, -), CAediting_932443(117182781, -), CAediting_932444(117182782, -), CAediting_932445(117182813, -), CAediting_932446(117182835, -), CAediting_932447(117182836, -), CAediting_932448(117182858, -), CAediting_932449(117182953, -), CAediting_932450(117182981, -), CAediting_932451(117182993, -), CAediting_932452(117183011, -), CAediting_932453(117183047, -), CAediting_932454(117183051, -), CAediting_932455(117183059, -), CAediting_932456(117183060, -), CAediting_932457(117183086, -), CAediting_932458(117183088, -), CAediting_932459(117183090, -), CAediting_932460(117183285, -), CAediting_932461(117183371, -), CAediting_932462(117183392, -), CAediting_932463(117183397, -), CAediting_932464(117183398, -), CAediting_932465(117183408, -), CAediting_932466(117183420, -), CAediting_932467(117183424, -), CAediting_932468(117183428, -), CAediting_932469(117183433, -), CAediting_932470(117183435, -), CAediting_932471(117183453, -), CAediting_932472(117183531, -), CAediting_932473(117183532, -), CAediting_932474(117183540, -), CAediting_932475(117183548, -), CAediting_932476(117184551, -), CAediting_932477(117184631, -),

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RNA editing positional annotations for FBXO21 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_932337chr12_117147425_-intronic
CAediting_932338chr12_117154396_-ncRNA_intronic
CAediting_932339chr12_117154474_-ncRNA_intronic
CAediting_932340chr12_117154537_-ncRNA_intronic
CAediting_932341chr12_117163844_-intronic
CAediting_932342chr12_117163857_-intronic
CAediting_932343chr12_117163858_-intronic
CAediting_932344chr12_117163861_-intronic
CAediting_932345chr12_117163862_-intronic
CAediting_932346chr12_117163868_-intronic
CAediting_932347chr12_117163882_-intronic
CAediting_932348chr12_117163897_-intronic
CAediting_932349chr12_117164307_-intronic
CAediting_932350chr12_117164315_-intronic
CAediting_932351chr12_117164334_-intronic
CAediting_932352chr12_117164339_-intronic
CAediting_932353chr12_117164369_-intronic
CAediting_932354chr12_117164373_-intronic
CAediting_932355chr12_117164374_-intronic
CAediting_932356chr12_117164382_-intronic
CAediting_932357chr12_117164385_-intronic
CAediting_932358chr12_117164387_-intronic
CAediting_932359chr12_117164388_-intronic
CAediting_932360chr12_117164392_-intronic
CAediting_932361chr12_117164398_-intronic
CAediting_932362chr12_117164401_-intronic
CAediting_932363chr12_117164414_-intronic
CAediting_932364chr12_117164441_-intronic
CAediting_932365chr12_117164445_-intronic
CAediting_932366chr12_117164447_-intronic
CAediting_932367chr12_117164448_-intronic
CAediting_932368chr12_117164453_-intronic
CAediting_932369chr12_117164454_-intronic
CAediting_932370chr12_117164455_-intronic
CAediting_932371chr12_117164458_-intronic
CAediting_932372chr12_117164489_-intronic
CAediting_932373chr12_117164495_-intronic
CAediting_932374chr12_117164503_-intronic
CAediting_932375chr12_117164525_-intronic
CAediting_932376chr12_117173102_-ncRNA_intronic
CAediting_932377chr12_117180644_-ncRNA_intronic
CAediting_932378chr12_117180686_-ncRNA_intronic
CAediting_932379chr12_117180691_-ncRNA_intronic
CAediting_932380chr12_117180722_-ncRNA_intronic
CAediting_932381chr12_117180723_-ncRNA_intronic
CAediting_932382chr12_117180729_-ncRNA_intronic
CAediting_932383chr12_117180737_-ncRNA_intronic
CAediting_932384chr12_117180741_-ncRNA_intronic
CAediting_932385chr12_117180763_-ncRNA_intronic
CAediting_932386chr12_117180764_-ncRNA_intronic
CAediting_932387chr12_117180828_-ncRNA_intronic
CAediting_932388chr12_117180839_-ncRNA_intronic
CAediting_932389chr12_117181679_-ncRNA_intronic
CAediting_932390chr12_117181684_-ncRNA_intronic
CAediting_932391chr12_117181712_-ncRNA_intronic
CAediting_932392chr12_117181746_-ncRNA_intronic
CAediting_932393chr12_117181764_-ncRNA_intronic
CAediting_932394chr12_117181782_-ncRNA_intronic
CAediting_932395chr12_117181787_-ncRNA_intronic
CAediting_932396chr12_117181788_-ncRNA_intronic
CAediting_932397chr12_117181798_-ncRNA_intronic
CAediting_932398chr12_117181814_-ncRNA_intronic
CAediting_932399chr12_117181845_-ncRNA_intronic
CAediting_932400chr12_117181852_-ncRNA_intronic
CAediting_932401chr12_117181883_-ncRNA_intronic
CAediting_932402chr12_117181923_-ncRNA_intronic
CAediting_932403chr12_117181940_-ncRNA_intronic
CAediting_932404chr12_117182243_-ncRNA_intronic
CAediting_932405chr12_117182249_-ncRNA_intronic
CAediting_932406chr12_117182250_-ncRNA_intronic
CAediting_932407chr12_117182251_-ncRNA_intronic
CAediting_932408chr12_117182264_-ncRNA_intronic
CAediting_932409chr12_117182276_-ncRNA_intronic
CAediting_932410chr12_117182277_-ncRNA_intronic
CAediting_932411chr12_117182289_-ncRNA_intronic
CAediting_932412chr12_117182302_-ncRNA_intronic
CAediting_932413chr12_117182314_-ncRNA_intronic
CAediting_932414chr12_117182322_-ncRNA_intronic
CAediting_932415chr12_117182324_-ncRNA_intronic
CAediting_932416chr12_117182328_-ncRNA_intronic
CAediting_932417chr12_117182341_-ncRNA_intronic
CAediting_932418chr12_117182342_-ncRNA_intronic
CAediting_932419chr12_117182358_-ncRNA_intronic
CAediting_932420chr12_117182366_-ncRNA_intronic
CAediting_932421chr12_117182368_-ncRNA_intronic
CAediting_932422chr12_117182370_-ncRNA_intronic
CAediting_932423chr12_117182374_-ncRNA_intronic
CAediting_932424chr12_117182378_-ncRNA_intronic
CAediting_932425chr12_117182408_-ncRNA_intronic
CAediting_932426chr12_117182426_-ncRNA_intronic
CAediting_932427chr12_117182432_-ncRNA_intronic
CAediting_932428chr12_117182453_-ncRNA_intronic
CAediting_932429chr12_117182483_-ncRNA_intronic
CAediting_932430chr12_117182512_-ncRNA_intronic
CAediting_932431chr12_117182528_-ncRNA_intronic
CAediting_932432chr12_117182635_-ncRNA_intronic
CAediting_932433chr12_117182636_-ncRNA_intronic
CAediting_932434chr12_117182659_-ncRNA_intronic
CAediting_932435chr12_117182660_-ncRNA_intronic
CAediting_932436chr12_117182691_-ncRNA_intronic
CAediting_932437chr12_117182700_-ncRNA_intronic
CAediting_932438chr12_117182701_-ncRNA_intronic
CAediting_932439chr12_117182711_-ncRNA_intronic
CAediting_932440chr12_117182719_-ncRNA_intronic
CAediting_932441chr12_117182727_-ncRNA_intronic
CAediting_932442chr12_117182741_-ncRNA_intronic
CAediting_932443chr12_117182781_-ncRNA_intronic
CAediting_932444chr12_117182782_-ncRNA_intronic
CAediting_932445chr12_117182813_-ncRNA_intronic
CAediting_932446chr12_117182835_-ncRNA_intronic
CAediting_932447chr12_117182836_-ncRNA_intronic
CAediting_932448chr12_117182858_-ncRNA_intronic
CAediting_932449chr12_117182953_-ncRNA_intronic
CAediting_932450chr12_117182981_-ncRNA_intronic
CAediting_932451chr12_117182993_-ncRNA_intronic
CAediting_932452chr12_117183011_-ncRNA_intronic
CAediting_932453chr12_117183047_-ncRNA_intronic
CAediting_932454chr12_117183051_-ncRNA_intronic
CAediting_932455chr12_117183059_-ncRNA_intronic
CAediting_932456chr12_117183060_-ncRNA_intronic
CAediting_932457chr12_117183086_-ncRNA_intronic
CAediting_932458chr12_117183088_-ncRNA_intronic
CAediting_932459chr12_117183090_-ncRNA_intronic
CAediting_932460chr12_117183285_-ncRNA_intronic
CAediting_932461chr12_117183371_-ncRNA_intronic
CAediting_932462chr12_117183392_-ncRNA_intronic
CAediting_932463chr12_117183397_-ncRNA_intronic
CAediting_932464chr12_117183398_-ncRNA_intronic
CAediting_932465chr12_117183408_-ncRNA_intronic
CAediting_932466chr12_117183420_-ncRNA_intronic
CAediting_932467chr12_117183424_-ncRNA_intronic
CAediting_932468chr12_117183428_-ncRNA_intronic
CAediting_932469chr12_117183433_-ncRNA_intronic
CAediting_932470chr12_117183435_-ncRNA_intronic
CAediting_932471chr12_117183453_-ncRNA_intronic
CAediting_932472chr12_117183531_-ncRNA_intronic
CAediting_932473chr12_117183532_-ncRNA_intronic
CAediting_932474chr12_117183540_-ncRNA_intronic
CAediting_932475chr12_117183548_-ncRNA_intronic
CAediting_932476chr12_117184551_-ncRNA_intronic
CAediting_932477chr12_117184631_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_932337chr12_117147425_-SINEAluAluSg7
CAediting_932338chr12_117154396_-SINEAluAluJr
CAediting_932339chr12_117154474_-SINEAluAluJr
CAediting_932340chr12_117154537_-SINEAluAluJr
CAediting_932341chr12_117163844_-SINEAluAluSz
CAediting_932342chr12_117163857_-SINEAluAluSz
CAediting_932343chr12_117163858_-SINEAluAluSz
CAediting_932344chr12_117163861_-SINEAluAluSz
CAediting_932345chr12_117163862_-SINEAluAluSz
CAediting_932346chr12_117163868_-SINEAluAluSz
CAediting_932347chr12_117163882_-SINEAluAluSz
CAediting_932348chr12_117163897_-SINEAluAluSz
CAediting_932349chr12_117164307_-SINEAluAluSx1
CAediting_932350chr12_117164315_-SINEAluAluSx1
CAediting_932351chr12_117164334_-SINEAluAluSx1
CAediting_932352chr12_117164339_-SINEAluAluSx1
CAediting_932353chr12_117164369_-SINEAluAluSx1
CAediting_932354chr12_117164373_-SINEAluAluSx1
CAediting_932355chr12_117164374_-SINEAluAluSx1
CAediting_932356chr12_117164382_-SINEAluAluSx1
CAediting_932357chr12_117164385_-SINEAluAluSx1
CAediting_932358chr12_117164387_-SINEAluAluSx1
CAediting_932359chr12_117164388_-SINEAluAluSx1
CAediting_932360chr12_117164392_-SINEAluAluSx1
CAediting_932361chr12_117164398_-SINEAluAluSx1
CAediting_932362chr12_117164401_-SINEAluAluSx1
CAediting_932363chr12_117164414_-SINEAluAluSx1
CAediting_932364chr12_117164441_-SINEAluAluSx1
CAediting_932365chr12_117164445_-SINEAluAluSx1
CAediting_932366chr12_117164447_-SINEAluAluSx1
CAediting_932367chr12_117164448_-SINEAluAluSx1
CAediting_932368chr12_117164453_-SINEAluAluSx1
CAediting_932369chr12_117164454_-SINEAluAluSx1
CAediting_932370chr12_117164455_-SINEAluAluSx1
CAediting_932371chr12_117164458_-SINEAluAluSx1
CAediting_932372chr12_117164489_-SINEAluAluSx1
CAediting_932373chr12_117164495_-SINEAluAluSx1
CAediting_932374chr12_117164503_-SINEAluAluSx1
CAediting_932375chr12_117164525_-SINEAluAluSx1
CAediting_932376chr12_117173102_-SINEAluAluSx1
CAediting_932377chr12_117180644_-SINEAluAluSc
CAediting_932378chr12_117180686_-SINEAluAluSc
CAediting_932379chr12_117180691_-SINEAluAluSc
CAediting_932380chr12_117180722_-SINEAluAluSc
CAediting_932381chr12_117180723_-SINEAluAluSc
CAediting_932382chr12_117180729_-SINEAluAluSc
CAediting_932383chr12_117180737_-SINEAluAluSc
CAediting_932384chr12_117180741_-SINEAluAluSc
CAediting_932385chr12_117180763_-SINEAluAluSc
CAediting_932386chr12_117180764_-SINEAluAluSc
CAediting_932387chr12_117180828_-SINEAluAluSc
CAediting_932388chr12_117180839_-SINEAluAluSc
CAediting_932389chr12_117181679_-SINEAluAluSx1
CAediting_932390chr12_117181684_-SINEAluAluSx1
CAediting_932391chr12_117181712_-SINEAluAluSx1
CAediting_932392chr12_117181746_-SINEAluAluSx1
CAediting_932393chr12_117181764_-SINEAluAluSx1
CAediting_932394chr12_117181782_-SINEAluAluSx1
CAediting_932395chr12_117181787_-SINEAluAluSx1
CAediting_932396chr12_117181788_-SINEAluAluSx1
CAediting_932397chr12_117181798_-SINEAluAluSx1
CAediting_932398chr12_117181814_-SINEAluAluSx1
CAediting_932399chr12_117181845_-SINEAluAluSx1
CAediting_932400chr12_117181852_-SINEAluAluSx1
CAediting_932401chr12_117181883_-SINEAluAluSx1
CAediting_932402chr12_117181923_-SINEAluAluSx1
CAediting_932403chr12_117181940_-SINEAluAluSx1
CAediting_932404chr12_117182243_-SINEAluAluJr4
CAediting_932405chr12_117182249_-SINEAluAluJr4
CAediting_932406chr12_117182250_-SINEAluAluJr4
CAediting_932407chr12_117182251_-SINEAluAluJr4
CAediting_932408chr12_117182264_-SINEAluAluJr4
CAediting_932409chr12_117182276_-SINEAluAluJr4
CAediting_932410chr12_117182277_-SINEAluAluJr4
CAediting_932411chr12_117182289_-SINEAluAluJr4
CAediting_932412chr12_117182302_-SINEAluAluJr4
CAediting_932413chr12_117182314_-SINEAluAluJr4
CAediting_932414chr12_117182322_-SINEAluAluJr4
CAediting_932415chr12_117182324_-SINEAluAluJr4
CAediting_932416chr12_117182328_-SINEAluAluJr4
CAediting_932417chr12_117182341_-SINEAluAluJr4
CAediting_932418chr12_117182342_-SINEAluAluJr4
CAediting_932419chr12_117182358_-SINEAluAluJr4
CAediting_932420chr12_117182366_-SINEAluAluJr4
CAediting_932421chr12_117182368_-SINEAluAluJr4
CAediting_932422chr12_117182370_-SINEAluAluJr4
CAediting_932423chr12_117182374_-SINEAluAluJr4
CAediting_932424chr12_117182378_-SINEAluAluJr4
CAediting_932425chr12_117182408_-SINEAluAluJr4
CAediting_932426chr12_117182426_-SINEAluAluJr4
CAediting_932427chr12_117182432_-SINEAluAluJr4
CAediting_932428chr12_117182453_-SINEAluAluJr4
CAediting_932429chr12_117182483_-SINEAluAluJr4
CAediting_932430chr12_117182512_-SINEAluAluJo
CAediting_932431chr12_117182528_-SINEAluAluJo
CAediting_932432chr12_117182635_-SINEAluAluSz
CAediting_932433chr12_117182636_-SINEAluAluSz
CAediting_932434chr12_117182659_-SINEAluAluSz
CAediting_932435chr12_117182660_-SINEAluAluSz
CAediting_932436chr12_117182691_-SINEAluAluSz
CAediting_932437chr12_117182700_-SINEAluAluSz
CAediting_932438chr12_117182701_-SINEAluAluSz
CAediting_932439chr12_117182711_-SINEAluAluSz
CAediting_932440chr12_117182719_-SINEAluAluSz
CAediting_932441chr12_117182727_-SINEAluAluSz
CAediting_932442chr12_117182741_-SINEAluAluSz
CAediting_932443chr12_117182781_-SINEAluAluSz
CAediting_932444chr12_117182782_-SINEAluAluSz
CAediting_932445chr12_117182813_-SINEAluAluSz
CAediting_932446chr12_117182835_-SINEAluAluSz
CAediting_932447chr12_117182836_-SINEAluAluSz
CAediting_932448chr12_117182858_-SINEAluAluSz
CAediting_932449chr12_117182953_-SINEAluAluJr
CAediting_932450chr12_117182981_-SINEAluAluJr
CAediting_932451chr12_117182993_-SINEAluAluJr
CAediting_932452chr12_117183011_-SINEAluAluJr
CAediting_932453chr12_117183047_-SINEAluAluJr
CAediting_932454chr12_117183051_-SINEAluAluJr
CAediting_932455chr12_117183059_-SINEAluAluJr
CAediting_932456chr12_117183060_-SINEAluAluJr
CAediting_932457chr12_117183086_-SINEAluAluJr
CAediting_932458chr12_117183088_-SINEAluAluJr
CAediting_932459chr12_117183090_-SINEAluAluJr
CAediting_932460chr12_117183285_-SINEAluAluSq2
CAediting_932461chr12_117183371_-SINEAluAluSq2
CAediting_932462chr12_117183392_-SINEAluAluSq2
CAediting_932463chr12_117183397_-SINEAluAluSq2
CAediting_932464chr12_117183398_-SINEAluAluSq2
CAediting_932465chr12_117183408_-SINEAluAluSq2
CAediting_932466chr12_117183420_-SINEAluAluSq2
CAediting_932467chr12_117183424_-SINEAluAluSq2
CAediting_932468chr12_117183428_-SINEAluAluSq2
CAediting_932469chr12_117183433_-SINEAluAluSq2
CAediting_932470chr12_117183435_-SINEAluAluSq2
CAediting_932471chr12_117183453_-SINEAluAluSq2
CAediting_932472chr12_117183531_-SINEAluAluSq2
CAediting_932473chr12_117183532_-SINEAluAluSq2
CAediting_932474chr12_117183540_-SINEAluAluSq2
CAediting_932475chr12_117183548_-SINEAluAluSq2
CAediting_932476chr12_117184551_-SINEAluAluSp
CAediting_932477chr12_117184631_-SINEAluAluSp

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RNA A-to-I editing events in the alternative splicing sites for FBXO21

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000135108.13.FBXO21.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000135108.13.FBXO21.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FBXO21

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for FBXO21

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for FBXO21

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000135108.13ENST00000548840hsa-miR-605-3p1171554811171554877mer-m8117155480117155505142-17.28
CAediting_748296chr10_51299626_+ENSG00000135108.13ENST00000548840hsa-miR-605-3p1171553771171553837mer-m8117155376117155397145-19.32
CAediting_1229414chr17_67471546_+ENSG00000135108.13ENST00000427718hsa-miR-548aa1171451441171451507mer-m8117145143117145171150-12.63
CAediting_573001chr7_92204086_-ENSG00000135108.13ENST00000427718hsa-miR-1285-5p1171451941171452018mer-1a117145194117145214145-13.66
CAediting_1229414chr17_67471546_+ENSG00000135108.13ENST00000550180hsa-miR-548aa1171451441171451507mer-m8117145143117145171150-12.63
CAediting_573001chr7_92204086_-ENSG00000135108.13ENST00000550180hsa-miR-1285-5p1171451941171452018mer-1a117145194117145214145-13.66
CAediting_1229414chr17_67471546_+ENSG00000135108.13ENST00000330622hsa-miR-548aa1171451441171451507mer-m8117145143117145171150-12.63
CAediting_573001chr7_92204086_-ENSG00000135108.13ENST00000330622hsa-miR-1285-5p1171451941171452018mer-1a117145194117145214145-13.66

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_396018chr5_1062918_-ENSG00000135108.13ENST00000427718hsa-miR-46351171450081171450147mer-m8117145007117145027147-11.32
CAediting_1229413chr17_67471544_+ENSG00000135108.13ENST00000427718hsa-miR-548aa1171441281171441358mer-1a117144128117144151147-8.48
CAediting_1229414chr17_67471546_+ENSG00000135108.13ENST00000427718hsa-miR-548aa1171441281171441358mer-1a117144128117144151147-8.48
CAediting_1229415chr17_67471547_+ENSG00000135108.13ENST00000427718hsa-miR-548aa1171441281171441358mer-1a117144128117144151147-8.48
CAediting_1351755chr19_40282625_-ENSG00000135108.13ENST00000427718hsa-miR-6411171449661171449727mer-m8117144965117144988140-10.83
CAediting_1351755chr19_40282625_-ENSG00000135108.13ENST00000427718hsa-miR-6411171440771171440837mer-m8117144076117144100154-13.94
CAediting_748296chr10_51299626_+ENSG00000135108.13ENST00000548840hsa-miR-605-3p1171551901171551978mer-1a117155190117155212147-10.78

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FBXO21

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for FBXO21

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for FBXO21

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for FBXO21

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
OVCAediting_932423chr12_117182374_-0.04319957569030770.03337990.0851491

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RelatedDrugs for FBXO21

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for FBXO21

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
FBXO21C0043094Weight Gain1CTD_human