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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SHANK2 (CAeditome ID:22941)

Gene summary for SHANK2

check button Gene summary
Gene informationGene symbol

SHANK2

Gene ID

22941

Gene nameSH3 and multiple ankyrin repeat domains 2
SynonymsAUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3
Cytomap

11q13.3-q13.4

Type of geneprotein-coding
DescriptionSH3 and multiple ankyrin repeat domains protein 2GKAP/SAPAP interacting proteincortactin SH3 domain-binding proteincortactin-binding protein 1proline-rich synapse associated protein 1
Modification date20210518
UniProtAcc

Q9UPX8

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for SHANK2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000162105.15
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_836060(70469720, -), CAediting_836061(70479577, -), CAediting_836062(70479781, -), CAediting_836063(70493787, -), CAediting_836064(70515567, -), CAediting_836065(70515599, -), CAediting_836066(70518329, -), CAediting_836067(70519547, -), CAediting_836068(70519564, -), CAediting_836069(70519565, -), CAediting_836070(70519584, -), CAediting_836071(70519608, -), CAediting_836072(70519766, -), CAediting_836073(70519798, -), CAediting_836074(70519819, -), CAediting_836075(70519838, -), CAediting_836076(70519841, -), CAediting_836077(70519842, -), CAediting_836078(70519851, -), CAediting_836079(70519998, -), CAediting_836080(70520014, -), CAediting_836081(70520029, -), CAediting_836082(70529753, -), CAediting_836083(70529832, -), CAediting_836084(70530597, -), CAediting_836085(70533855, -), CAediting_836086(70546358, -), CAediting_836087(70546362, -), CAediting_836088(70546365, -), CAediting_836089(70555601, -), CAediting_836090(70555664, -), CAediting_836091(70555712, -), CAediting_836092(70555720, -), CAediting_836093(70556494, -), CAediting_836094(70556505, -), CAediting_836095(70556513, -), CAediting_836096(70556518, -), CAediting_836097(70556531, -), CAediting_836098(70556532, -), CAediting_836099(70556544, -), CAediting_836100(70556554, -), CAediting_836101(70556580, -), CAediting_836102(70556729, -), CAediting_836103(70556730, -), CAediting_836104(70556743, -), CAediting_836105(70556756, -), CAediting_836106(70556851, -), CAediting_836107(70556999, -), CAediting_836108(70567378, -), CAediting_836109(70567461, -), CAediting_836110(70587734, -), CAediting_836111(70587794, -), CAediting_836112(70587796, -), CAediting_836113(70587797, -), CAediting_836114(70587802, -), CAediting_836115(70587807, -), CAediting_836116(70587820, -), CAediting_836117(70587821, -), CAediting_836118(70587834, -), CAediting_836119(70587842, -), CAediting_836120(70587845, -), CAediting_836121(70587851, -), CAediting_836122(70587859, -), CAediting_836123(70587861, -), CAediting_836124(70587865, -), CAediting_836125(70588826, -), CAediting_836126(70589126, -), CAediting_836127(70589888, -), CAediting_836128(70589897, -), CAediting_836129(70590079, -), CAediting_836130(70590156, -), CAediting_836131(70590648, -), CAediting_836132(70591097, -), CAediting_836133(70591098, -), CAediting_836134(70591180, -), CAediting_836135(70591240, -), CAediting_836136(70591276, -), CAediting_836137(70591795, -), CAediting_836138(70591907, -), CAediting_836139(70595017, -), CAediting_836140(70595791, -), CAediting_836141(70599746, -), CAediting_836142(70599753, -), CAediting_836143(70601150, -), CAediting_836144(70601167, -), CAediting_836145(70601192, -), CAediting_836146(70601305, -), CAediting_836147(70601402, -), CAediting_836148(70601423, -), CAediting_836149(70606335, -), CAediting_836150(70613476, -), CAediting_836151(70613819, -), CAediting_836152(70613902, -), CAediting_836153(70613964, -), CAediting_836154(70614014, -), CAediting_836155(70614389, -), CAediting_836156(70614449, -), CAediting_836157(70614450, -), CAediting_836158(70614501, -), CAediting_836159(70614521, -), CAediting_836160(70618247, -), CAediting_836161(70641098, -), CAediting_836162(70641101, -), CAediting_836163(70641126, -), CAediting_836164(70641163, -), CAediting_836165(70641164, -), CAediting_836166(70641168, -), CAediting_836167(70641188, -), CAediting_836168(70641224, -), CAediting_836169(70641228, -), CAediting_836170(70641234, -), CAediting_836171(70641260, -), CAediting_836172(70641263, -), CAediting_836173(70641266, -), CAediting_836174(70641267, -), CAediting_836175(70641268, -), CAediting_836176(70641288, -), CAediting_836177(70641308, -), CAediting_836178(70641311, -), CAediting_836179(70641317, -), CAediting_836180(70641327, -), CAediting_836181(70641360, -), CAediting_836182(70641365, -), CAediting_836183(70641366, -), CAediting_836184(70643436, -), CAediting_836185(70652562, -), CAediting_836186(70652575, -), CAediting_836187(70652580, -), CAediting_836188(70652592, -), CAediting_836189(70652607, -), CAediting_836190(70652671, -), CAediting_836191(70652683, -), CAediting_836192(70652689, -), CAediting_836193(70652694, -), CAediting_836194(70652702, -), CAediting_836195(70652703, -), CAediting_836196(70652716, -), CAediting_836197(70652727, -), CAediting_836198(70652728, -), CAediting_836199(70652759, -), CAediting_836200(70653802, -), CAediting_836201(70653884, -), CAediting_836202(70683851, -), CAediting_836203(70684477, -), CAediting_836204(70729429, -), CAediting_836205(70752201, -), CAediting_836206(70757944, -), CAediting_836207(70757957, -), CAediting_836208(70770992, -), CAediting_836209(70770993, -), CAediting_836210(70770996, -), CAediting_836211(70770997, -), CAediting_836212(70771022, -), CAediting_836213(70771049, -), CAediting_836214(70771053, -), CAediting_836215(70771057, -), CAediting_836216(70771071, -), CAediting_836217(70771073, -), CAediting_836218(70771089, -), CAediting_836219(70771092, -), CAediting_836220(70771100, -), CAediting_836221(70771119, -), CAediting_836222(70771125, -), CAediting_836223(70771146, -), CAediting_836224(70771154, -), CAediting_836225(70771164, -), CAediting_836226(70772324, -), CAediting_836227(70772328, -), CAediting_836228(70772383, -), CAediting_836229(70774392, -), CAediting_836230(70774393, -), CAediting_836231(70774402, -), CAediting_836232(70774941, -), CAediting_836233(70775301, -), CAediting_836234(70775420, -), CAediting_836235(70794018, -), CAediting_836236(70794035, -), CAediting_836237(70794036, -), CAediting_836238(70794037, -), CAediting_836239(70794064, -), CAediting_836240(70794114, -), CAediting_836241(70794115, -), CAediting_836242(70794141, -), CAediting_836243(70794159, -), CAediting_836244(70794169, -), CAediting_836245(70794181, -), CAediting_836246(70794188, -), CAediting_836247(70794198, -), CAediting_836248(70794199, -), CAediting_836249(70794618, -), CAediting_836250(70794625, -), CAediting_836251(70794686, -), CAediting_836252(70794695, -), CAediting_836253(70794696, -), CAediting_836254(70794797, -), CAediting_836255(70794828, -), CAediting_836256(70795466, -), CAediting_836257(70795473, -), CAediting_836258(70795495, -), CAediting_836259(70795502, -), CAediting_836260(70795503, -), CAediting_836261(70795521, -), CAediting_836262(70795527, -), CAediting_836263(70795538, -), CAediting_836264(70795544, -), CAediting_836265(70795575, -), CAediting_836266(70795584, -), CAediting_836267(70795588, -), CAediting_836268(70795599, -), CAediting_836269(70795600, -), CAediting_836270(70795619, -), CAediting_836271(70795630, -), CAediting_836272(70795638, -), CAediting_836273(70795648, -), CAediting_836274(70807595, -), CAediting_836275(70846428, -), CAediting_836276(70881518, -), CAediting_836277(70891599, -), CAediting_836278(70894273, -), CAediting_836279(70918644, -), CAediting_836280(70919078, -), CAediting_836281(70919102, -), CAediting_836282(70919114, -), CAediting_836283(70919174, -), CAediting_836284(70942025, -), CAediting_836285(70942135, -), CAediting_836286(71126978, -), CAediting_836287(71128821, -), CAediting_836288(71128822, -), CAediting_836289(71128842, -), CAediting_836290(71128882, -), CAediting_836291(71128949, -), CAediting_836292(71128986, -), CAediting_836293(71129003, -), CAediting_836294(71129471, -), CAediting_836295(71129496, -), CAediting_836296(71129517, -), CAediting_836297(71129533, -), CAediting_836298(71129563, -), CAediting_836299(71129568, -), CAediting_836300(71129582, -), CAediting_836301(71129594, -), CAediting_836302(71129597, -), CAediting_836303(71129598, -), CAediting_836304(71129610, -), CAediting_836305(71129622, -), CAediting_836306(71129638, -), CAediting_836307(71141389, -), CAediting_836308(71141401, -), CAediting_836309(71166578, -), CAediting_836310(71191088, -), CAediting_836311(71191089, -), CAediting_836312(71191109, -), CAediting_836313(71191656, -), CAediting_836314(71191657, -), CAediting_836315(71196097, -), CAediting_836316(71196316, -), CAediting_836317(71196353, -), CAediting_836318(71196383, -), CAediting_836319(71196556, -), CAediting_836320(71196572, -), CAediting_836321(71196946, -), CAediting_836322(71197723, -), CAediting_836323(71197747, -), CAediting_836324(71198175, -), CAediting_836325(71198213, -), CAediting_836326(71206911, -), CAediting_836327(71206962, -), CAediting_836328(71207018, -), CAediting_836329(71207034, -), CAediting_836330(71207050, -), CAediting_836331(71207282, -), CAediting_836332(71207317, -), CAediting_836333(71207318, -), CAediting_836334(71207320, -), CAediting_836335(71207326, -), CAediting_836336(71207331, -), CAediting_836337(71207355, -), CAediting_836338(71207356, -), CAediting_836339(71207383, -), CAediting_836340(71207399, -), CAediting_836341(71207431, -), CAediting_836342(71207435, -), CAediting_836343(71207452, -), CAediting_836344(71207453, -), CAediting_836345(71211414, -), CAediting_836346(71211416, -), CAediting_836347(71217047, -), CAediting_836348(71217064, -), CAediting_836349(71217068, -), CAediting_836350(71217153, -), CAediting_836351(71217175, -), CAediting_836352(71218015, -), CAediting_836353(71218332, -), CAediting_836354(71218337, -), CAediting_836355(71218376, -), CAediting_836356(71218380, -), CAediting_836357(71218392, -), CAediting_836358(71218402, -), CAediting_836359(71218412, -), CAediting_836360(71218428, -), CAediting_836361(71218431, -), CAediting_836362(71218432, -), CAediting_836363(71218433, -), CAediting_836364(71218436, -), CAediting_836365(71218445, -), CAediting_836366(71218463, -), CAediting_836367(71218464, -), CAediting_836368(71218466, -), CAediting_836369(71218470, -), CAediting_836370(71218479, -), CAediting_836371(71218481, -), CAediting_836372(71218527, -), CAediting_836373(71218535, -), CAediting_836374(71240695, -), CAediting_836375(71240712, -), CAediting_836376(71240853, -), CAediting_836377(71243643, -),

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RNA editing positional annotations for SHANK2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_836060chr11_70469720_-ncRNA_exonic
CAediting_836061chr11_70479577_-intronic
CAediting_836062chr11_70479781_-intronic
CAediting_836063chr11_70493787_-intronic
CAediting_836064chr11_70515567_-intronic
CAediting_836065chr11_70515599_-intronic
CAediting_836066chr11_70518329_-intronic
CAediting_836067chr11_70519547_-intronic
CAediting_836068chr11_70519564_-intronic
CAediting_836069chr11_70519565_-intronic
CAediting_836070chr11_70519584_-intronic
CAediting_836071chr11_70519608_-intronic
CAediting_836072chr11_70519766_-intronic
CAediting_836073chr11_70519798_-intronic
CAediting_836074chr11_70519819_-intronic
CAediting_836075chr11_70519838_-intronic
CAediting_836076chr11_70519841_-intronic
CAediting_836077chr11_70519842_-intronic
CAediting_836078chr11_70519851_-intronic
CAediting_836079chr11_70519998_-intronic
CAediting_836080chr11_70520014_-intronic
CAediting_836081chr11_70520029_-intronic
CAediting_836082chr11_70529753_-intronic
CAediting_836083chr11_70529832_-intronic
CAediting_836084chr11_70530597_-intronic
CAediting_836085chr11_70533855_-intronic
CAediting_836086chr11_70546358_-intronic
CAediting_836087chr11_70546362_-intronic
CAediting_836088chr11_70546365_-intronic
CAediting_836089chr11_70555601_-intronic
CAediting_836090chr11_70555664_-intronic
CAediting_836091chr11_70555712_-intronic
CAediting_836092chr11_70555720_-intronic
CAediting_836093chr11_70556494_-intronic
CAediting_836094chr11_70556505_-intronic
CAediting_836095chr11_70556513_-intronic
CAediting_836096chr11_70556518_-intronic
CAediting_836097chr11_70556531_-intronic
CAediting_836098chr11_70556532_-intronic
CAediting_836099chr11_70556544_-intronic
CAediting_836100chr11_70556554_-intronic
CAediting_836101chr11_70556580_-intronic
CAediting_836102chr11_70556729_-intronic
CAediting_836103chr11_70556730_-intronic
CAediting_836104chr11_70556743_-intronic
CAediting_836105chr11_70556756_-intronic
CAediting_836106chr11_70556851_-intronic
CAediting_836107chr11_70556999_-intronic
CAediting_836108chr11_70567378_-ncRNA_intronic
CAediting_836109chr11_70567461_-ncRNA_intronic
CAediting_836110chr11_70587734_-ncRNA_intronic
CAediting_836111chr11_70587794_-ncRNA_intronic
CAediting_836112chr11_70587796_-ncRNA_intronic
CAediting_836113chr11_70587797_-ncRNA_intronic
CAediting_836114chr11_70587802_-ncRNA_intronic
CAediting_836115chr11_70587807_-ncRNA_intronic
CAediting_836116chr11_70587820_-ncRNA_intronic
CAediting_836117chr11_70587821_-ncRNA_intronic
CAediting_836118chr11_70587834_-ncRNA_intronic
CAediting_836119chr11_70587842_-ncRNA_intronic
CAediting_836120chr11_70587845_-ncRNA_intronic
CAediting_836121chr11_70587851_-ncRNA_intronic
CAediting_836122chr11_70587859_-ncRNA_intronic
CAediting_836123chr11_70587861_-ncRNA_intronic
CAediting_836124chr11_70587865_-ncRNA_intronic
CAediting_836125chr11_70588826_-ncRNA_intronic
CAediting_836126chr11_70589126_-ncRNA_intronic
CAediting_836127chr11_70589888_-ncRNA_intronic
CAediting_836128chr11_70589897_-ncRNA_intronic
CAediting_836129chr11_70590079_-ncRNA_intronic
CAediting_836130chr11_70590156_-ncRNA_intronic
CAediting_836131chr11_70590648_-ncRNA_intronic
CAediting_836132chr11_70591097_-ncRNA_intronic
CAediting_836133chr11_70591098_-ncRNA_intronic
CAediting_836134chr11_70591180_-ncRNA_intronic
CAediting_836135chr11_70591240_-ncRNA_intronic
CAediting_836136chr11_70591276_-ncRNA_intronic
CAediting_836137chr11_70591795_-ncRNA_intronic
CAediting_836138chr11_70591907_-ncRNA_intronic
CAediting_836139chr11_70595017_-ncRNA_intronic
CAediting_836140chr11_70595791_-ncRNA_intronic
CAediting_836141chr11_70599746_-ncRNA_intronic
CAediting_836142chr11_70599753_-ncRNA_intronic
CAediting_836143chr11_70601150_-ncRNA_intronic
CAediting_836144chr11_70601167_-ncRNA_intronic
CAediting_836145chr11_70601192_-ncRNA_intronic
CAediting_836146chr11_70601305_-ncRNA_intronic
CAediting_836147chr11_70601402_-ncRNA_intronic
CAediting_836148chr11_70601423_-ncRNA_intronic
CAediting_836149chr11_70606335_-ncRNA_intronic
CAediting_836150chr11_70613476_-ncRNA_intronic
CAediting_836151chr11_70613819_-ncRNA_intronic
CAediting_836152chr11_70613902_-ncRNA_intronic
CAediting_836153chr11_70613964_-ncRNA_intronic
CAediting_836154chr11_70614014_-ncRNA_intronic
CAediting_836155chr11_70614389_-ncRNA_intronic
CAediting_836156chr11_70614449_-ncRNA_intronic
CAediting_836157chr11_70614450_-ncRNA_intronic
CAediting_836158chr11_70614501_-ncRNA_intronic
CAediting_836159chr11_70614521_-ncRNA_intronic
CAediting_836160chr11_70618247_-ncRNA_intronic
CAediting_836161chr11_70641098_-ncRNA_intronic
CAediting_836162chr11_70641101_-ncRNA_intronic
CAediting_836163chr11_70641126_-ncRNA_intronic
CAediting_836164chr11_70641163_-ncRNA_intronic
CAediting_836165chr11_70641164_-ncRNA_intronic
CAediting_836166chr11_70641168_-ncRNA_intronic
CAediting_836167chr11_70641188_-ncRNA_intronic
CAediting_836168chr11_70641224_-ncRNA_intronic
CAediting_836169chr11_70641228_-ncRNA_intronic
CAediting_836170chr11_70641234_-ncRNA_intronic
CAediting_836171chr11_70641260_-ncRNA_intronic
CAediting_836172chr11_70641263_-ncRNA_intronic
CAediting_836173chr11_70641266_-ncRNA_intronic
CAediting_836174chr11_70641267_-ncRNA_intronic
CAediting_836175chr11_70641268_-ncRNA_intronic
CAediting_836176chr11_70641288_-ncRNA_intronic
CAediting_836177chr11_70641308_-ncRNA_intronic
CAediting_836178chr11_70641311_-ncRNA_intronic
CAediting_836179chr11_70641317_-ncRNA_intronic
CAediting_836180chr11_70641327_-ncRNA_intronic
CAediting_836181chr11_70641360_-ncRNA_intronic
CAediting_836182chr11_70641365_-ncRNA_intronic
CAediting_836183chr11_70641366_-ncRNA_intronic
CAediting_836184chr11_70643436_-ncRNA_intronic
CAediting_836185chr11_70652562_-ncRNA_intronic
CAediting_836186chr11_70652575_-ncRNA_intronic
CAediting_836187chr11_70652580_-ncRNA_intronic
CAediting_836188chr11_70652592_-ncRNA_intronic
CAediting_836189chr11_70652607_-ncRNA_intronic
CAediting_836190chr11_70652671_-ncRNA_intronic
CAediting_836191chr11_70652683_-ncRNA_intronic
CAediting_836192chr11_70652689_-ncRNA_intronic
CAediting_836193chr11_70652694_-ncRNA_intronic
CAediting_836194chr11_70652702_-ncRNA_intronic
CAediting_836195chr11_70652703_-ncRNA_intronic
CAediting_836196chr11_70652716_-ncRNA_intronic
CAediting_836197chr11_70652727_-ncRNA_intronic
CAediting_836198chr11_70652728_-ncRNA_intronic
CAediting_836199chr11_70652759_-ncRNA_intronic
CAediting_836200chr11_70653802_-ncRNA_intronic
CAediting_836201chr11_70653884_-ncRNA_intronic
CAediting_836202chr11_70683851_-ncRNA_intronic
CAediting_836203chr11_70684477_-ncRNA_intronic
CAediting_836204chr11_70729429_-ncRNA_intronic
CAediting_836205chr11_70752201_-ncRNA_intronic
CAediting_836206chr11_70757944_-ncRNA_intronic
CAediting_836207chr11_70757957_-ncRNA_intronic
CAediting_836208chr11_70770992_-ncRNA_intronic
CAediting_836209chr11_70770993_-ncRNA_intronic
CAediting_836210chr11_70770996_-ncRNA_intronic
CAediting_836211chr11_70770997_-ncRNA_intronic
CAediting_836212chr11_70771022_-ncRNA_intronic
CAediting_836213chr11_70771049_-ncRNA_intronic
CAediting_836214chr11_70771053_-ncRNA_intronic
CAediting_836215chr11_70771057_-ncRNA_intronic
CAediting_836216chr11_70771071_-ncRNA_intronic
CAediting_836217chr11_70771073_-ncRNA_intronic
CAediting_836218chr11_70771089_-ncRNA_intronic
CAediting_836219chr11_70771092_-ncRNA_intronic
CAediting_836220chr11_70771100_-ncRNA_intronic
CAediting_836221chr11_70771119_-ncRNA_intronic
CAediting_836222chr11_70771125_-ncRNA_intronic
CAediting_836223chr11_70771146_-ncRNA_intronic
CAediting_836224chr11_70771154_-ncRNA_intronic
CAediting_836225chr11_70771164_-ncRNA_intronic
CAediting_836226chr11_70772324_-ncRNA_intronic
CAediting_836227chr11_70772328_-ncRNA_intronic
CAediting_836228chr11_70772383_-ncRNA_intronic
CAediting_836229chr11_70774392_-ncRNA_intronic
CAediting_836230chr11_70774393_-ncRNA_intronic
CAediting_836231chr11_70774402_-ncRNA_intronic
CAediting_836232chr11_70774941_-ncRNA_intronic
CAediting_836233chr11_70775301_-ncRNA_intronic
CAediting_836234chr11_70775420_-ncRNA_intronic
CAediting_836235chr11_70794018_-ncRNA_intronic
CAediting_836236chr11_70794035_-ncRNA_intronic
CAediting_836237chr11_70794036_-ncRNA_intronic
CAediting_836238chr11_70794037_-ncRNA_intronic
CAediting_836239chr11_70794064_-ncRNA_intronic
CAediting_836240chr11_70794114_-ncRNA_intronic
CAediting_836241chr11_70794115_-ncRNA_intronic
CAediting_836242chr11_70794141_-ncRNA_intronic
CAediting_836243chr11_70794159_-ncRNA_intronic
CAediting_836244chr11_70794169_-ncRNA_intronic
CAediting_836245chr11_70794181_-ncRNA_intronic
CAediting_836246chr11_70794188_-ncRNA_intronic
CAediting_836247chr11_70794198_-ncRNA_intronic
CAediting_836248chr11_70794199_-ncRNA_intronic
CAediting_836249chr11_70794618_-ncRNA_intronic
CAediting_836250chr11_70794625_-ncRNA_intronic
CAediting_836251chr11_70794686_-ncRNA_intronic
CAediting_836252chr11_70794695_-ncRNA_intronic
CAediting_836253chr11_70794696_-ncRNA_intronic
CAediting_836254chr11_70794797_-ncRNA_intronic
CAediting_836255chr11_70794828_-ncRNA_intronic
CAediting_836256chr11_70795466_-ncRNA_intronic
CAediting_836257chr11_70795473_-ncRNA_intronic
CAediting_836258chr11_70795495_-ncRNA_intronic
CAediting_836259chr11_70795502_-ncRNA_intronic
CAediting_836260chr11_70795503_-ncRNA_intronic
CAediting_836261chr11_70795521_-ncRNA_intronic
CAediting_836262chr11_70795527_-ncRNA_intronic
CAediting_836263chr11_70795538_-ncRNA_intronic
CAediting_836264chr11_70795544_-ncRNA_intronic
CAediting_836265chr11_70795575_-ncRNA_intronic
CAediting_836266chr11_70795584_-ncRNA_intronic
CAediting_836267chr11_70795588_-ncRNA_intronic
CAediting_836268chr11_70795599_-ncRNA_intronic
CAediting_836269chr11_70795600_-ncRNA_intronic
CAediting_836270chr11_70795619_-ncRNA_intronic
CAediting_836271chr11_70795630_-ncRNA_intronic
CAediting_836272chr11_70795638_-ncRNA_intronic
CAediting_836273chr11_70795648_-ncRNA_intronic
CAediting_836274chr11_70807595_-ncRNA_intronic
CAediting_836275chr11_70846428_-ncRNA_intronic
CAediting_836276chr11_70881518_-ncRNA_intronic
CAediting_836277chr11_70891599_-ncRNA_intronic
CAediting_836278chr11_70894273_-ncRNA_intronic
CAediting_836279chr11_70918644_-ncRNA_intronic
CAediting_836280chr11_70919078_-ncRNA_intronic
CAediting_836281chr11_70919102_-ncRNA_intronic
CAediting_836282chr11_70919114_-ncRNA_intronic
CAediting_836283chr11_70919174_-ncRNA_intronic
CAediting_836284chr11_70942025_-ncRNA_intronic
CAediting_836285chr11_70942135_-ncRNA_intronic
CAediting_836286chr11_71126978_-intronic
CAediting_836287chr11_71128821_-intronic
CAediting_836288chr11_71128822_-intronic
CAediting_836289chr11_71128842_-intronic
CAediting_836290chr11_71128882_-intronic
CAediting_836291chr11_71128949_-intronic
CAediting_836292chr11_71128986_-intronic
CAediting_836293chr11_71129003_-intronic
CAediting_836294chr11_71129471_-intronic
CAediting_836295chr11_71129496_-intronic
CAediting_836296chr11_71129517_-intronic
CAediting_836297chr11_71129533_-intronic
CAediting_836298chr11_71129563_-intronic
CAediting_836299chr11_71129568_-intronic
CAediting_836300chr11_71129582_-intronic
CAediting_836301chr11_71129594_-intronic
CAediting_836302chr11_71129597_-intronic
CAediting_836303chr11_71129598_-intronic
CAediting_836304chr11_71129610_-intronic
CAediting_836305chr11_71129622_-intronic
CAediting_836306chr11_71129638_-intronic
CAediting_836307chr11_71141389_-intronic
CAediting_836308chr11_71141401_-intronic
CAediting_836309chr11_71166578_-intronic
CAediting_836310chr11_71191088_-ncRNA_intronic
CAediting_836311chr11_71191089_-ncRNA_intronic
CAediting_836312chr11_71191109_-ncRNA_intronic
CAediting_836313chr11_71191656_-ncRNA_intronic
CAediting_836314chr11_71191657_-ncRNA_intronic
CAediting_836315chr11_71196097_-ncRNA_intronic
CAediting_836316chr11_71196316_-ncRNA_intronic
CAediting_836317chr11_71196353_-ncRNA_intronic
CAediting_836318chr11_71196383_-ncRNA_intronic
CAediting_836319chr11_71196556_-ncRNA_intronic
CAediting_836320chr11_71196572_-ncRNA_intronic
CAediting_836321chr11_71196946_-ncRNA_intronic
CAediting_836322chr11_71197723_-ncRNA_intronic
CAediting_836323chr11_71197747_-ncRNA_intronic
CAediting_836324chr11_71198175_-ncRNA_intronic
CAediting_836325chr11_71198213_-ncRNA_intronic
CAediting_836326chr11_71206911_-ncRNA_intronic
CAediting_836327chr11_71206962_-ncRNA_intronic
CAediting_836328chr11_71207018_-ncRNA_intronic
CAediting_836329chr11_71207034_-ncRNA_intronic
CAediting_836330chr11_71207050_-ncRNA_intronic
CAediting_836331chr11_71207282_-ncRNA_intronic
CAediting_836332chr11_71207317_-ncRNA_intronic
CAediting_836333chr11_71207318_-ncRNA_intronic
CAediting_836334chr11_71207320_-ncRNA_intronic
CAediting_836335chr11_71207326_-ncRNA_intronic
CAediting_836336chr11_71207331_-ncRNA_intronic
CAediting_836337chr11_71207355_-ncRNA_intronic
CAediting_836338chr11_71207356_-ncRNA_intronic
CAediting_836339chr11_71207383_-ncRNA_intronic
CAediting_836340chr11_71207399_-ncRNA_intronic
CAediting_836341chr11_71207431_-ncRNA_intronic
CAediting_836342chr11_71207435_-ncRNA_intronic
CAediting_836343chr11_71207452_-ncRNA_intronic
CAediting_836344chr11_71207453_-ncRNA_intronic
CAediting_836345chr11_71211414_-ncRNA_intronic
CAediting_836346chr11_71211416_-ncRNA_intronic
CAediting_836347chr11_71217047_-ncRNA_intronic
CAediting_836348chr11_71217064_-ncRNA_intronic
CAediting_836349chr11_71217068_-ncRNA_intronic
CAediting_836350chr11_71217153_-ncRNA_intronic
CAediting_836351chr11_71217175_-ncRNA_intronic
CAediting_836352chr11_71218015_-ncRNA_intronic
CAediting_836353chr11_71218332_-ncRNA_intronic
CAediting_836354chr11_71218337_-ncRNA_intronic
CAediting_836355chr11_71218376_-ncRNA_intronic
CAediting_836356chr11_71218380_-ncRNA_intronic
CAediting_836357chr11_71218392_-ncRNA_intronic
CAediting_836358chr11_71218402_-ncRNA_intronic
CAediting_836359chr11_71218412_-ncRNA_intronic
CAediting_836360chr11_71218428_-ncRNA_intronic
CAediting_836361chr11_71218431_-ncRNA_intronic
CAediting_836362chr11_71218432_-ncRNA_intronic
CAediting_836363chr11_71218433_-ncRNA_intronic
CAediting_836364chr11_71218436_-ncRNA_intronic
CAediting_836365chr11_71218445_-ncRNA_intronic
CAediting_836366chr11_71218463_-ncRNA_intronic
CAediting_836367chr11_71218464_-ncRNA_intronic
CAediting_836368chr11_71218466_-ncRNA_intronic
CAediting_836369chr11_71218470_-ncRNA_intronic
CAediting_836370chr11_71218479_-ncRNA_intronic
CAediting_836371chr11_71218481_-ncRNA_intronic
CAediting_836372chr11_71218527_-ncRNA_intronic
CAediting_836373chr11_71218535_-ncRNA_intronic
CAediting_836374chr11_71240695_-ncRNA_intronic
CAediting_836375chr11_71240712_-ncRNA_intronic
CAediting_836376chr11_71240853_-ncRNA_exonic
CAediting_836377chr11_71243643_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_836064chr11_70515567_-SINEAluAluJr
CAediting_836065chr11_70515599_-SINEAluAluJr
CAediting_836066chr11_70518329_-SINEAluAluJb
CAediting_836067chr11_70519547_-SINEAluAluSp
CAediting_836068chr11_70519564_-SINEAluAluSp
CAediting_836069chr11_70519565_-SINEAluAluSp
CAediting_836070chr11_70519584_-SINEAluAluSp
CAediting_836071chr11_70519608_-SINEAluAluSp
CAediting_836072chr11_70519766_-SINEAluAluJo
CAediting_836073chr11_70519798_-SINEAluAluJo
CAediting_836074chr11_70519819_-SINEAluAluJo
CAediting_836075chr11_70519838_-SINEAluAluJo
CAediting_836076chr11_70519841_-SINEAluAluJo
CAediting_836077chr11_70519842_-SINEAluAluJo
CAediting_836078chr11_70519851_-SINEAluAluJo
CAediting_836079chr11_70519998_-SINEAluAluJo
CAediting_836080chr11_70520014_-SINEAluAluJo
CAediting_836081chr11_70520029_-SINEAluAluJo
CAediting_836082chr11_70529753_-LINEL1L1MB5
CAediting_836083chr11_70529832_-LINEL1L1MB5
CAediting_836084chr11_70530597_-LINEL1L1MB3
CAediting_836085chr11_70533855_-LINEL1L1MB5
CAediting_836086chr11_70546358_-LTRERVLMER21C
CAediting_836087chr11_70546362_-LTRERVLMER21C
CAediting_836088chr11_70546365_-LTRERVLMER21C
CAediting_836089chr11_70555601_-SINEAluAluJo
CAediting_836090chr11_70555664_-SINEAluAluJo
CAediting_836091chr11_70555712_-SINEAluAluJo
CAediting_836092chr11_70555720_-SINEAluAluJo
CAediting_836093chr11_70556494_-SINEAluAluJo
CAediting_836094chr11_70556505_-SINEAluAluJo
CAediting_836095chr11_70556513_-SINEAluAluJo
CAediting_836096chr11_70556518_-SINEAluAluJo
CAediting_836097chr11_70556531_-SINEAluAluJo
CAediting_836098chr11_70556532_-SINEAluAluJo
CAediting_836099chr11_70556544_-SINEAluAluJo
CAediting_836100chr11_70556554_-SINEAluAluJo
CAediting_836101chr11_70556580_-SINEAluAluJo
CAediting_836102chr11_70556729_-SINEAluAluSz
CAediting_836103chr11_70556730_-SINEAluAluSz
CAediting_836104chr11_70556743_-SINEAluAluSz
CAediting_836105chr11_70556756_-SINEAluAluSz
CAediting_836106chr11_70556851_-SINEAluAluSz
CAediting_836107chr11_70556999_-SINEAluAluJo
CAediting_836108chr11_70567378_-SINEAluAluSg4
CAediting_836109chr11_70567461_-SINEAluAluSg4
CAediting_836110chr11_70587734_-SINEAluFRAM
CAediting_836111chr11_70587794_-SINEAluFRAM
CAediting_836112chr11_70587796_-SINEAluFRAM
CAediting_836113chr11_70587797_-SINEAluFRAM
CAediting_836114chr11_70587802_-SINEAluFRAM
CAediting_836115chr11_70587807_-SINEAluFRAM
CAediting_836116chr11_70587820_-SINEAluFRAM
CAediting_836117chr11_70587821_-SINEAluFRAM
CAediting_836118chr11_70587834_-SINEAluFRAM
CAediting_836119chr11_70587842_-SINEAluFRAM
CAediting_836120chr11_70587845_-SINEAluFRAM
CAediting_836121chr11_70587851_-SINEAluFRAM
CAediting_836122chr11_70587859_-SINEAluFRAM
CAediting_836123chr11_70587861_-SINEAluFRAM
CAediting_836124chr11_70587865_-SINEAluFRAM
CAediting_836125chr11_70588826_-SINEAluAluY
CAediting_836126chr11_70589126_-DNATcMar-TiggerTigger1
CAediting_836127chr11_70589888_-SINEAluAluY
CAediting_836128chr11_70589897_-SINEAluAluY
CAediting_836129chr11_70590079_-SINEAluAluY
CAediting_836130chr11_70590156_-SINEAluAluY
CAediting_836131chr11_70590648_-DNATcMar-TiggerTigger1
CAediting_836132chr11_70591097_-SINEAluAluSz
CAediting_836133chr11_70591098_-SINEAluAluSz
CAediting_836134chr11_70591180_-SINEAluAluSz
CAediting_836135chr11_70591240_-SINEAluAluSz
CAediting_836136chr11_70591276_-SINEAluAluSz
CAediting_836137chr11_70591795_-SINEAluAluSz
CAediting_836138chr11_70591907_-SINEAluAluSz
CAediting_836141chr11_70599746_-SINEAluAluSx1
CAediting_836142chr11_70599753_-SINEAluAluSx1
CAediting_836143chr11_70601150_-SINEAluAluSx
CAediting_836144chr11_70601167_-SINEAluAluSx
CAediting_836145chr11_70601192_-SINEAluAluSx
CAediting_836146chr11_70601305_-SINEAluAluSc
CAediting_836147chr11_70601402_-SINEAluAluSc
CAediting_836148chr11_70601423_-SINEAluAluSc
CAediting_836149chr11_70606335_-SINEAluAluJr4
CAediting_836150chr11_70613476_-SINEAluAluY
CAediting_836151chr11_70613819_-SINEAluAluSz
CAediting_836152chr11_70613902_-SINEAluAluSz
CAediting_836153chr11_70613964_-SINEAluAluSz
CAediting_836154chr11_70614014_-SINEAluAluSz
CAediting_836155chr11_70614389_-SINEAluAluSx
CAediting_836156chr11_70614449_-SINEAluAluSx
CAediting_836157chr11_70614450_-SINEAluAluSx
CAediting_836158chr11_70614501_-SINEAluAluSx
CAediting_836159chr11_70614521_-SINEAluAluSx
CAediting_836160chr11_70618247_-SINEAluAluSz
CAediting_836161chr11_70641098_-SINEAluAluY
CAediting_836162chr11_70641101_-SINEAluAluY
CAediting_836163chr11_70641126_-SINEAluAluY
CAediting_836164chr11_70641163_-SINEAluAluY
CAediting_836165chr11_70641164_-SINEAluAluY
CAediting_836166chr11_70641168_-SINEAluAluY
CAediting_836167chr11_70641188_-SINEAluAluY
CAediting_836168chr11_70641224_-SINEAluAluY
CAediting_836169chr11_70641228_-SINEAluAluY
CAediting_836170chr11_70641234_-SINEAluAluY
CAediting_836171chr11_70641260_-SINEAluAluY
CAediting_836172chr11_70641263_-SINEAluAluY
CAediting_836173chr11_70641266_-SINEAluAluY
CAediting_836174chr11_70641267_-SINEAluAluY
CAediting_836175chr11_70641268_-SINEAluAluY
CAediting_836176chr11_70641288_-SINEAluAluY
CAediting_836177chr11_70641308_-SINEAluAluY
CAediting_836178chr11_70641311_-SINEAluAluY
CAediting_836179chr11_70641317_-SINEAluAluY
CAediting_836180chr11_70641327_-SINEAluAluY
CAediting_836181chr11_70641360_-SINEAluAluY
CAediting_836182chr11_70641365_-SINEAluAluY
CAediting_836183chr11_70641366_-SINEAluAluY
CAediting_836184chr11_70643436_-SINEAluAluY
CAediting_836185chr11_70652562_-SINEAluAluJr
CAediting_836186chr11_70652575_-SINEAluAluJr
CAediting_836187chr11_70652580_-SINEAluAluJr
CAediting_836188chr11_70652592_-SINEAluAluJr
CAediting_836189chr11_70652607_-SINEAluAluJr
CAediting_836190chr11_70652671_-SINEAluAluJr
CAediting_836191chr11_70652683_-SINEAluAluJr
CAediting_836192chr11_70652689_-SINEAluAluJr
CAediting_836193chr11_70652694_-SINEAluAluJr
CAediting_836194chr11_70652702_-SINEAluAluJr
CAediting_836195chr11_70652703_-SINEAluAluJr
CAediting_836196chr11_70652716_-SINEAluAluJr
CAediting_836197chr11_70652727_-SINEAluAluJr
CAediting_836198chr11_70652728_-SINEAluAluJr
CAediting_836199chr11_70652759_-SINEAluAluJr
CAediting_836200chr11_70653802_-SINEAluAluSx
CAediting_836201chr11_70653884_-SINEAluAluSx
CAediting_836202chr11_70683851_-SINEAluAluSz6
CAediting_836203chr11_70684477_-SINEAluAluJr
CAediting_836204chr11_70729429_-LINEL1L1MB5
CAediting_836205chr11_70752201_-SINEAluAluJr
CAediting_836206chr11_70757944_-LTRERVL-MaLRMLT1C
CAediting_836207chr11_70757957_-LTRERVL-MaLRMLT1C
CAediting_836208chr11_70770992_-SINEAluAluSx
CAediting_836209chr11_70770993_-SINEAluAluSx
CAediting_836210chr11_70770996_-SINEAluAluSx
CAediting_836211chr11_70770997_-SINEAluAluSx
CAediting_836212chr11_70771022_-SINEAluAluSx
CAediting_836213chr11_70771049_-SINEAluAluSx
CAediting_836214chr11_70771053_-SINEAluAluSx
CAediting_836215chr11_70771057_-SINEAluAluSx
CAediting_836216chr11_70771071_-SINEAluAluSx
CAediting_836217chr11_70771073_-SINEAluAluSx
CAediting_836218chr11_70771089_-SINEAluAluSx
CAediting_836219chr11_70771092_-SINEAluAluSx
CAediting_836220chr11_70771100_-SINEAluAluSx
CAediting_836221chr11_70771119_-SINEAluAluSx
CAediting_836222chr11_70771125_-SINEAluAluSx
CAediting_836223chr11_70771146_-SINEAluAluSx
CAediting_836224chr11_70771154_-SINEAluAluSx
CAediting_836225chr11_70771164_-SINEAluAluSx
CAediting_836226chr11_70772324_-SINEAluAluSz
CAediting_836227chr11_70772328_-SINEAluAluSz
CAediting_836228chr11_70772383_-SINEAluAluSz
CAediting_836229chr11_70774392_-SINEAluAluSx
CAediting_836230chr11_70774393_-SINEAluAluSx
CAediting_836231chr11_70774402_-SINEAluAluSx
CAediting_836232chr11_70774941_-SINEAluAluJr
CAediting_836233chr11_70775301_-SINEAluAluSg
CAediting_836234chr11_70775420_-SINEAluAluSg
CAediting_836235chr11_70794018_-SINEAluAluSx1
CAediting_836236chr11_70794035_-SINEAluAluSx1
CAediting_836237chr11_70794036_-SINEAluAluSx1
CAediting_836238chr11_70794037_-SINEAluAluSx1
CAediting_836239chr11_70794064_-SINEAluAluSx1
CAediting_836240chr11_70794114_-SINEAluAluSx1
CAediting_836241chr11_70794115_-SINEAluAluSx1
CAediting_836242chr11_70794141_-SINEAluAluSx1
CAediting_836243chr11_70794159_-SINEAluAluSx1
CAediting_836244chr11_70794169_-SINEAluAluSx1
CAediting_836245chr11_70794181_-SINEAluAluSx1
CAediting_836246chr11_70794188_-SINEAluAluSx1
CAediting_836247chr11_70794198_-SINEAluAluSx1
CAediting_836248chr11_70794199_-SINEAluAluSx1
CAediting_836249chr11_70794618_-SINEAluAluSq2
CAediting_836250chr11_70794625_-SINEAluAluSq2
CAediting_836251chr11_70794686_-SINEAluAluSq2
CAediting_836252chr11_70794695_-SINEAluAluSq2
CAediting_836253chr11_70794696_-SINEAluAluSq2
CAediting_836254chr11_70794797_-SINEAluAluSq2
CAediting_836255chr11_70794828_-SINEAluAluSq2
CAediting_836256chr11_70795466_-SINEAluAluSz
CAediting_836257chr11_70795473_-SINEAluAluSz
CAediting_836258chr11_70795495_-SINEAluAluSz
CAediting_836259chr11_70795502_-SINEAluAluSz
CAediting_836260chr11_70795503_-SINEAluAluSz
CAediting_836261chr11_70795521_-SINEAluAluSz
CAediting_836262chr11_70795527_-SINEAluAluSz
CAediting_836263chr11_70795538_-SINEAluAluSz
CAediting_836264chr11_70795544_-SINEAluAluSz
CAediting_836265chr11_70795575_-SINEAluAluSz
CAediting_836266chr11_70795584_-SINEAluAluSz
CAediting_836267chr11_70795588_-SINEAluAluSz
CAediting_836268chr11_70795599_-SINEAluAluSz
CAediting_836269chr11_70795600_-SINEAluAluSz
CAediting_836270chr11_70795619_-SINEAluAluSz
CAediting_836271chr11_70795630_-SINEAluAluSz
CAediting_836272chr11_70795638_-SINEAluAluSz
CAediting_836273chr11_70795648_-SINEAluAluSz
CAediting_836274chr11_70807595_-SINEAluAluSx1
CAediting_836275chr11_70846428_-SINEAluAluJr
CAediting_836276chr11_70881518_-SINEAluAluJo
CAediting_836277chr11_70891599_-LTRERVL-MaLRMLT1C
CAediting_836278chr11_70894273_-SINEAluAluSq
CAediting_836279chr11_70918644_-SINEAluAluSx1
CAediting_836280chr11_70919078_-SINEAluAluJb
CAediting_836281chr11_70919102_-SINEAluAluJb
CAediting_836282chr11_70919114_-SINEAluAluJb
CAediting_836283chr11_70919174_-SINEAluAluJb
CAediting_836284chr11_70942025_-SINEAluAluSg
CAediting_836285chr11_70942135_-SINEAluAluSg
CAediting_836286chr11_71126978_-SINEAluAluYm1
CAediting_836287chr11_71128821_-SINEAluAluSc
CAediting_836288chr11_71128822_-SINEAluAluSc
CAediting_836289chr11_71128842_-SINEAluAluSc
CAediting_836290chr11_71128882_-SINEAluAluSc
CAediting_836291chr11_71128949_-SINEAluAluSc
CAediting_836292chr11_71128986_-SINEAluAluSc
CAediting_836293chr11_71129003_-SINEAluAluSc
CAediting_836294chr11_71129471_-SINEAluAluJb
CAediting_836295chr11_71129496_-SINEAluAluJb
CAediting_836296chr11_71129517_-SINEAluAluJb
CAediting_836297chr11_71129533_-SINEAluAluJb
CAediting_836298chr11_71129563_-SINEAluAluJb
CAediting_836299chr11_71129568_-SINEAluAluJb
CAediting_836300chr11_71129582_-SINEAluAluJb
CAediting_836301chr11_71129594_-SINEAluAluJb
CAediting_836302chr11_71129597_-SINEAluAluJb
CAediting_836303chr11_71129598_-SINEAluAluJb
CAediting_836304chr11_71129610_-SINEAluAluJb
CAediting_836305chr11_71129622_-SINEAluAluJb
CAediting_836306chr11_71129638_-SINEAluAluJb
CAediting_836307chr11_71141389_-SINEAluAluSx1
CAediting_836308chr11_71141401_-SINEAluAluSx1
CAediting_836309chr11_71166578_-SINEAluAluSq
CAediting_836310chr11_71191088_-SINEAluAluJb
CAediting_836311chr11_71191089_-SINEAluAluJb
CAediting_836312chr11_71191109_-SINEAluAluJb
CAediting_836313chr11_71191656_-SINEAluAluSx
CAediting_836314chr11_71191657_-SINEAluAluSx
CAediting_836315chr11_71196097_-SINEAluAluJo
CAediting_836316chr11_71196316_-SINEAluAluSg
CAediting_836317chr11_71196353_-SINEAluAluSg
CAediting_836318chr11_71196383_-SINEAluAluSg
CAediting_836319chr11_71196556_-SINEAluAluSg
CAediting_836320chr11_71196572_-SINEAluAluSg
CAediting_836321chr11_71196946_-SINEAluAluSx1
CAediting_836322chr11_71197723_-SINEAluAluYc
CAediting_836323chr11_71197747_-SINEAluAluYc
CAediting_836324chr11_71198175_-SINEAluFLAM_C
CAediting_836325chr11_71198213_-SINEAluFLAM_C
CAediting_836326chr11_71206911_-SINEAluAluJr
CAediting_836327chr11_71206962_-SINEAluAluJr
CAediting_836328chr11_71207018_-SINEAluAluJr
CAediting_836329chr11_71207034_-SINEAluAluJr
CAediting_836330chr11_71207050_-SINEAluAluJr
CAediting_836331chr11_71207282_-SINEAluAluSx1
CAediting_836332chr11_71207317_-SINEAluAluSx1
CAediting_836333chr11_71207318_-SINEAluAluSx1
CAediting_836334chr11_71207320_-SINEAluAluSx1
CAediting_836335chr11_71207326_-SINEAluAluSx1
CAediting_836336chr11_71207331_-SINEAluAluSx1
CAediting_836337chr11_71207355_-SINEAluAluSx1
CAediting_836338chr11_71207356_-SINEAluAluSx1
CAediting_836339chr11_71207383_-SINEAluAluSx1
CAediting_836340chr11_71207399_-SINEAluAluSx1
CAediting_836341chr11_71207431_-SINEAluAluSx1
CAediting_836342chr11_71207435_-SINEAluAluSx1
CAediting_836343chr11_71207452_-SINEAluAluSx1
CAediting_836344chr11_71207453_-SINEAluAluSx1
CAediting_836345chr11_71211414_-SINEAluAluJb
CAediting_836346chr11_71211416_-SINEAluAluJb
CAediting_836347chr11_71217047_-SINEAluAluSq2
CAediting_836348chr11_71217064_-SINEAluAluSq2
CAediting_836349chr11_71217068_-SINEAluAluSq2
CAediting_836350chr11_71217153_-SINEAluAluSq2
CAediting_836351chr11_71217175_-SINEAluAluSq2
CAediting_836352chr11_71218015_-SINEAluAluY
CAediting_836353chr11_71218332_-SINEAluAluSp
CAediting_836354chr11_71218337_-SINEAluAluSp
CAediting_836355chr11_71218376_-SINEAluAluSp
CAediting_836356chr11_71218380_-SINEAluAluSp
CAediting_836357chr11_71218392_-SINEAluAluSp
CAediting_836358chr11_71218402_-SINEAluAluSp
CAediting_836359chr11_71218412_-SINEAluAluSp
CAediting_836360chr11_71218428_-SINEAluAluSp
CAediting_836361chr11_71218431_-SINEAluAluSp
CAediting_836362chr11_71218432_-SINEAluAluSp
CAediting_836363chr11_71218433_-SINEAluAluSp
CAediting_836364chr11_71218436_-SINEAluAluSp
CAediting_836365chr11_71218445_-SINEAluAluSp
CAediting_836366chr11_71218463_-SINEAluAluSp
CAediting_836367chr11_71218464_-SINEAluAluSp
CAediting_836368chr11_71218466_-SINEAluAluSp
CAediting_836369chr11_71218470_-SINEAluAluSp
CAediting_836370chr11_71218479_-SINEAluAluSp
CAediting_836371chr11_71218481_-SINEAluAluSp
CAediting_836372chr11_71218527_-SINEAluAluSp
CAediting_836373chr11_71218535_-SINEAluAluSp
CAediting_836374chr11_71240695_-SINEAluAluJo
CAediting_836375chr11_71240712_-SINEAluAluJo
CAediting_836376chr11_71240853_-SINEAluAluJo
CAediting_836377chr11_71243643_-SINEAluAluY

Top

RNA A-to-I editing events in the alternative splicing sites for SHANK2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000162105.15.SHANK2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000162105.15.SHANK2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SHANK2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for SHANK2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SHANK2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_836060chr11_70469720_-ENSG00000162105.15ENST00000449833hsa-miR-6894-3p70469717704697237mer-m87046971670469735145.00-12.11
CAediting_836060chr11_70469720_-ENSG00000162105.15ENST00000409161hsa-miR-6894-3p70469717704697237mer-m87046971670469735145.00-12.11
CAediting_836060chr11_70469720_-ENSG00000162105.15ENST00000424924hsa-miR-6894-3p70469717704697237mer-m87046971670469735145.00-12.11
CAediting_836060chr11_70469720_-ENSG00000162105.15ENST00000338508hsa-miR-6894-3p70469717704697237mer-m87046971670469735145.00-12.11

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000162105.15ENST00000449833hsa-miR-451270472442704724487mer-m87047244170472462140-18.94
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70468634704686407mer-m87046863370468657140-10.34
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000449833hsa-miR-320e70469327704693337mer-m87046932670469343140-15.18
CAediting_86358chr1_109598906_+ENSG00000162105.15ENST00000449833hsa-miR-197-5p70471454704714607mer-m87047145370471474162-32.23
CAediting_86358chr1_109598906_+ENSG00000162105.15ENST00000449833hsa-miR-197-5p70472450704724556mer7047244970472472140-28.16
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000449833hsa-miR-4423-3p70471779704717857mer-m87047177870471798144-13.11
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000449833hsa-miR-4423-3p70472188704721947mer-m87047218770472207142-12.07
CAediting_396018chr5_1062918_-ENSG00000162105.15ENST00000449833hsa-miR-463570468706704687127mer-m87046870570468724145-15.75
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000449833hsa-miR-130370470883704708908mer-1a7047088370470902144-13.55
CAediting_573001chr7_92204086_-ENSG00000162105.15ENST00000449833hsa-miR-1285-5p70471829704718368mer-1a7047182970471849152-19.66
CAediting_1054808chr15_66496985_-ENSG00000162105.15ENST00000409161hsa-miR-451270472442704724487mer-m87047244170472462140-18.94
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70468634704686407mer-m87046863370468657140-10.34
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000409161hsa-miR-320e70469327704693337mer-m87046932670469343140-15.18
CAediting_86358chr1_109598906_+ENSG00000162105.15ENST00000409161hsa-miR-197-5p70471454704714607mer-m87047145370471474162-32.23
CAediting_86358chr1_109598906_+ENSG00000162105.15ENST00000409161hsa-miR-197-5p70472450704724556mer7047244970472472140-28.16
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000409161hsa-miR-4423-3p70471779704717857mer-m87047177870471798144-13.11
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000409161hsa-miR-4423-3p70472188704721947mer-m87047218770472207142-12.07
CAediting_396018chr5_1062918_-ENSG00000162105.15ENST00000409161hsa-miR-463570468706704687127mer-m87046870570468724145-15.75
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000409161hsa-miR-130370470883704708908mer-1a7047088370470902144-13.55
CAediting_573001chr7_92204086_-ENSG00000162105.15ENST00000409161hsa-miR-1285-5p70471829704718368mer-1a7047182970471849152-19.66
CAediting_1054808chr15_66496985_-ENSG00000162105.15ENST00000424924hsa-miR-451270472442704724487mer-m87047244170472462140-18.94
CAediting_86358chr1_109598906_+ENSG00000162105.15ENST00000424924hsa-miR-197-5p70471454704714607mer-m87047145370471474162-32.23
CAediting_86358chr1_109598906_+ENSG00000162105.15ENST00000424924hsa-miR-197-5p70472450704724556mer7047244970472472140-28.16
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000424924hsa-miR-4423-3p70471779704717857mer-m87047177870471798144-13.11
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000424924hsa-miR-4423-3p70472188704721947mer-m87047218770472207142-12.07
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000424924hsa-miR-130370470883704708908mer-1a7047088370470902144-13.55
CAediting_573001chr7_92204086_-ENSG00000162105.15ENST00000424924hsa-miR-1285-5p70471829704718368mer-1a7047182970471849152-19.66
CAediting_1054808chr15_66496985_-ENSG00000162105.15ENST00000338508hsa-miR-451270472442704724487mer-m87047244170472462140-18.94
CAediting_86358chr1_109598906_+ENSG00000162105.15ENST00000338508hsa-miR-197-5p70471454704714607mer-m87047145370471474162-32.23
CAediting_86358chr1_109598906_+ENSG00000162105.15ENST00000338508hsa-miR-197-5p70472450704724556mer7047244970472472140-28.16
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000338508hsa-miR-4423-3p70471779704717857mer-m87047177870471798144-13.11
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000338508hsa-miR-4423-3p70472188704721947mer-m87047218770472207142-12.07
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000338508hsa-miR-130370470883704708908mer-1a7047088370470902144-13.55
CAediting_573001chr7_92204086_-ENSG00000162105.15ENST00000338508hsa-miR-1285-5p70471829704718368mer-1a7047182970471849152-19.66
CAediting_77128chr1_85133844_+ENSG00000162105.15ENST00000608988hsa-miR-4423-3p71075208710752147mer-m87107520771075228141-15.66
CAediting_228905chr2_188297554_+ENSG00000162105.15ENST00000608988hsa-miR-561-3p70907893709078986mer7090789270907913142-14.26
CAediting_580943chr7_100356700_+ENSG00000162105.15ENST00000608988hsa-miR-6840-3p70908023709080297mer-m87090802270908043143-28
CAediting_468389chr6_31355314_-ENSG00000162105.15ENST00000449833hsa-miR-6891-5p70472262704722676mer7047226170472281140-23.71
CAediting_468389chr6_31355314_-ENSG00000162105.15ENST00000409161hsa-miR-6891-5p70472262704722676mer7047226170472281140-23.71
CAediting_468389chr6_31355314_-ENSG00000162105.15ENST00000424924hsa-miR-6891-5p70472262704722676mer7047226170472281140-23.71
CAediting_468389chr6_31355314_-ENSG00000162105.15ENST00000338508hsa-miR-6891-5p70472262704722676mer7047226170472281140-23.71

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000162105.15ENST00000449833hsa-miR-1285-5p70472350704723567mer-m87047234970472368149-17.48
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000449833hsa-miR-130370471295704713017mer-m87047129470471315154-17.79
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000449833hsa-miR-130370469315704693228mer-1a7046931570469337155-18.15
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000449833hsa-miR-320e70471666704716727mer-m87047166570471680144-11.36
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000449833hsa-miR-320e70472184704721907mer-m87047218370472201148-18.16
CAediting_604450chr7_133034877_-ENSG00000162105.15ENST00000449833hsa-miR-365470469058704690647mer-m87046905770469073150-24.29
CAediting_604450chr7_133034877_-ENSG00000162105.15ENST00000449833hsa-miR-365470472327704723337mer-m87047232670472343152-16.36
CAediting_688080chr9_63819626_+ENSG00000162105.15ENST00000449833hsa-miR-4477b70469488704694958mer-1a7046948870469506145-6.92
CAediting_1054808chr15_66496985_-ENSG00000162105.15ENST00000449833hsa-miR-451270470083704700908mer-1a7047008370470104150-19.22
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000449833hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_228905chr2_188297554_+ENSG00000162105.15ENST00000449833hsa-miR-561-3p70471066704710727mer-m87047106570471086152-4.15
CAediting_228905chr2_188297554_+ENSG00000162105.15ENST00000449833hsa-miR-561-3p70470390704703956mer7047038970470409142-18.56
CAediting_228905chr2_188297554_+ENSG00000162105.15ENST00000449833hsa-miR-561-3p70472293704722997mer-m87047229270472313145-11.83
CAediting_524911chr7_5495852_-ENSG00000162105.15ENST00000449833hsa-miR-589-3p70469119704691257mer-m87046911870469141154-19.69
CAediting_980496chr14_31014685_-ENSG00000162105.15ENST00000449833hsa-miR-624-3p70468014704680196mer7046801370468033146-15.59
CAediting_1351755chr19_40282625_-ENSG00000162105.15ENST00000449833hsa-miR-64170471927704719337mer-m87047192670471949140-9.13
CAediting_573001chr7_92204086_-ENSG00000162105.15ENST00000409161hsa-miR-1285-5p70472350704723567mer-m87047234970472368149-17.48
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000409161hsa-miR-130370471295704713017mer-m87047129470471315154-17.79
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000409161hsa-miR-130370469315704693228mer-1a7046931570469337155-18.15
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000409161hsa-miR-320e70471666704716727mer-m87047166570471680144-11.36
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000409161hsa-miR-320e70472184704721907mer-m87047218370472201148-18.16
CAediting_604450chr7_133034877_-ENSG00000162105.15ENST00000409161hsa-miR-365470469058704690647mer-m87046905770469073150-24.29
CAediting_604450chr7_133034877_-ENSG00000162105.15ENST00000409161hsa-miR-365470472327704723337mer-m87047232670472343152-16.36
CAediting_688080chr9_63819626_+ENSG00000162105.15ENST00000409161hsa-miR-4477b70469488704694958mer-1a7046948870469506145-6.92
CAediting_1054808chr15_66496985_-ENSG00000162105.15ENST00000409161hsa-miR-451270470083704700908mer-1a7047008370470104150-19.22
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000409161hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_228905chr2_188297554_+ENSG00000162105.15ENST00000409161hsa-miR-561-3p70471066704710727mer-m87047106570471086152-4.15
CAediting_228905chr2_188297554_+ENSG00000162105.15ENST00000409161hsa-miR-561-3p70470390704703956mer7047038970470409142-18.56
CAediting_228905chr2_188297554_+ENSG00000162105.15ENST00000409161hsa-miR-561-3p70472293704722997mer-m87047229270472313145-11.83
CAediting_524911chr7_5495852_-ENSG00000162105.15ENST00000409161hsa-miR-589-3p70469119704691257mer-m87046911870469141154-19.69
CAediting_980496chr14_31014685_-ENSG00000162105.15ENST00000409161hsa-miR-624-3p70468014704680196mer7046801370468033146-15.59
CAediting_1351755chr19_40282625_-ENSG00000162105.15ENST00000409161hsa-miR-64170471927704719337mer-m87047192670471949140-9.13
CAediting_573001chr7_92204086_-ENSG00000162105.15ENST00000424924hsa-miR-1285-5p70472350704723567mer-m87047234970472368149-17.48
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000424924hsa-miR-130370471295704713017mer-m87047129470471315154-17.79
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000424924hsa-miR-320e70471666704716727mer-m87047166570471680144-11.36
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000424924hsa-miR-320e70472184704721907mer-m87047218370472201148-18.16
CAediting_604450chr7_133034877_-ENSG00000162105.15ENST00000424924hsa-miR-365470472327704723337mer-m87047232670472343152-16.36
CAediting_688080chr9_63819626_+ENSG00000162105.15ENST00000424924hsa-miR-4477b70469488704694958mer-1a7046948870469506145-6.92
CAediting_1054808chr15_66496985_-ENSG00000162105.15ENST00000424924hsa-miR-451270470083704700908mer-1a7047008370470104150-19.22
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000424924hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1351755chr19_40282625_-ENSG00000162105.15ENST00000424924hsa-miR-64170471927704719337mer-m87047192670471949140-9.13
CAediting_573001chr7_92204086_-ENSG00000162105.15ENST00000338508hsa-miR-1285-5p70472350704723567mer-m87047234970472368149-17.48
CAediting_442554chr5_154685830_+ENSG00000162105.15ENST00000338508hsa-miR-130370471295704713017mer-m87047129470471315154-17.79
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000338508hsa-miR-320e70471666704716727mer-m87047166570471680144-11.36
CAediting_1368054chr19_46709310_-ENSG00000162105.15ENST00000338508hsa-miR-320e70472184704721907mer-m87047218370472201148-18.16
CAediting_604450chr7_133034877_-ENSG00000162105.15ENST00000338508hsa-miR-365470472327704723337mer-m87047232670472343152-16.36
CAediting_688080chr9_63819626_+ENSG00000162105.15ENST00000338508hsa-miR-4477b70469488704694958mer-1a7046948870469506145-6.92
CAediting_1054808chr15_66496985_-ENSG00000162105.15ENST00000338508hsa-miR-451270470083704700908mer-1a7047008370470104150-19.22
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471337704713426mer7047132970471356155-8.52
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471329704713368mer-1a7047132970471356155-8.52
CAediting_1229414chr17_67471546_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1229415chr17_67471547_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1229413chr17_67471544_+ENSG00000162105.15ENST00000338508hsa-miR-548aa70471278704712847mer-m87047127770471301141-6.01
CAediting_1351755chr19_40282625_-ENSG00000162105.15ENST00000338508hsa-miR-64170471927704719337mer-m87047192670471949140-9.13

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SHANK2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SHANK2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_836124chr11_70587865_-0.00620644310816550.326346064552906....
LIHCCAediting_836124chr11_70587865_-0.008605980395883480.341960246788103....

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Relation with cancer stages for SHANK2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for SHANK2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for SHANK2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SHANK2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
SHANK2C0004352Autistic Disorder2CTD_human
SHANK2C0005586Bipolar Disorder1CTD_human
SHANK2C0005587Depression, Bipolar1CTD_human
SHANK2C0020796Profound Mental Retardation1CTD_human
SHANK2C0024713Manic Disorder1CTD_human
SHANK2C0025363Mental Retardation, Psychosocial1CTD_human
SHANK2C0338831Manic1CTD_human
SHANK2C0917816Mental deficiency1CTD_human
SHANK2C3150693AUTISM, SUSCEPTIBILITY TO, 171GENOMICS_ENGLAND
SHANK2C3714756Intellectual Disability1CTD_human