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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: FOXJ3 (CAeditome ID:22887)

Gene summary for FOXJ3

check button Gene summary
Gene informationGene symbol

FOXJ3

Gene ID

22887

Gene nameforkhead box J3
Synonyms-
Cytomap

1p34.2

Type of geneprotein-coding
Descriptionforkhead box protein J3
Modification date20210518
UniProtAcc

Q9UPW0

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
FOXJ3

GO:0001228

Forkhead box protein J3

22740631

FOXJ3

GO:0043565

Forkhead box protein J3

23332764

FOXJ3

GO:1990837

Forkhead box protein J3

28473536

FOXJ3

GO:0045944

Forkhead box protein J3

22740631


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RNA A-to-I events for FOXJ3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000198815.7

check button RNA A-to-I editing events in Cancer.
CAediting_52433(42178564, -), CAediting_52434(42178622, -), CAediting_52435(42178655, -), CAediting_52436(42178673, -), CAediting_52437(42178676, -), CAediting_52438(42182545, -), CAediting_52439(42182555, -), CAediting_52440(42182570, -), CAediting_52441(42182574, -), CAediting_52442(42182580, -), CAediting_52443(42182583, -), CAediting_52444(42182590, -), CAediting_52445(42182635, -), CAediting_52446(42182636, -), CAediting_52447(42182649, -), CAediting_52448(42182658, -), CAediting_52449(42182662, -), CAediting_52450(42182665, -), CAediting_52451(42182676, -), CAediting_52452(42182677, -), CAediting_52453(42182691, -), CAediting_52454(42182701, -), CAediting_52455(42182725, -), CAediting_52456(42182730, -), CAediting_52457(42182744, -), CAediting_52458(42182770, -), CAediting_52459(42182771, -), CAediting_52460(42183018, -), CAediting_52461(42183030, -), CAediting_52462(42183058, -), CAediting_52463(42183063, -), CAediting_52464(42183083, -), CAediting_52465(42183103, -), CAediting_52466(42183109, -), CAediting_52467(42183112, -), CAediting_52468(42183118, -), CAediting_52469(42183128, -), CAediting_52470(42183132, -), CAediting_52471(42183136, -), CAediting_52472(42183141, -), CAediting_52473(42183154, -), CAediting_52474(42183180, -), CAediting_52475(42183193, -), CAediting_52476(42183210, -), CAediting_52477(42183212, -), CAediting_52478(42183215, -), CAediting_52479(42183242, -), CAediting_52480(42185386, -), CAediting_52481(42185396, -), CAediting_52482(42185406, -), CAediting_52483(42185422, -), CAediting_52484(42185465, -), CAediting_52485(42185506, -), CAediting_52486(42186883, -), CAediting_52487(42186908, -), CAediting_52488(42186994, -), CAediting_52489(42187079, -), CAediting_52490(42197322, -), CAediting_52491(42200521, -), CAediting_52492(42200616, -), CAediting_52493(42203779, -), CAediting_52494(42226446, -), CAediting_52495(42226556, -), CAediting_52496(42235598, -), CAediting_52497(42235678, -), CAediting_52498(42235679, -), CAediting_52499(42235805, -), CAediting_52500(42235852, -), CAediting_52501(42235975, -), CAediting_52502(42236289, -), CAediting_52503(42236329, -), CAediting_52504(42236331, -), CAediting_52505(42236415, -), CAediting_52506(42236467, -), CAediting_52507(42236468, -), CAediting_52508(42237119, -), CAediting_52509(42237182, -), CAediting_52510(42237186, -), CAediting_52511(42238130, -), CAediting_52512(42238196, -), CAediting_52513(42238210, -), CAediting_52514(42238239, -), CAediting_52515(42238298, -), CAediting_52516(42248832, -), CAediting_52517(42248970, -), CAediting_52518(42248982, -), CAediting_52519(42249009, -), CAediting_52520(42249045, -), CAediting_52521(42249052, -), CAediting_52522(42249053, -), CAediting_52523(42249066, -), CAediting_52524(42249075, -), CAediting_52525(42249082, -), CAediting_52526(42249120, -), CAediting_52527(42249173, -), CAediting_52528(42271748, -), CAediting_52529(42287218, -), CAediting_52530(42287258, -), CAediting_52531(42290023, -), CAediting_52532(42290050, -), CAediting_52533(42290075, -), CAediting_52534(42290076, -), CAediting_52535(42290130, -), CAediting_52536(42290726, -), CAediting_52537(42290730, -), CAediting_52538(42290750, -), CAediting_52539(42290751, -), CAediting_52540(42290752, -), CAediting_52541(42290755, -), CAediting_52542(42290765, -), CAediting_52543(42290805, -), CAediting_52544(42290806, -), CAediting_52545(42290809, -), CAediting_52546(42293018, -), CAediting_52547(42295614, -), CAediting_52548(42295618, -), CAediting_52549(42295652, -), CAediting_52550(42295656, -), CAediting_52551(42295657, -), CAediting_52552(42295723, -), CAediting_52553(42296712, -), CAediting_52554(42296768, -), CAediting_52555(42297203, -), CAediting_52556(42297255, -), CAediting_52557(42297258, -), CAediting_52558(42297260, -), CAediting_52559(42300016, -), CAediting_52560(42300038, -), CAediting_52561(42300117, -), CAediting_52562(42300558, -), CAediting_52563(42300559, -), CAediting_52564(42300564, -), CAediting_52565(42300572, -), CAediting_52566(42300573, -), CAediting_52567(42300582, -), CAediting_52568(42300608, -), CAediting_52569(42300648, -), CAediting_52570(42300656, -), CAediting_52571(42300666, -), CAediting_52572(42300669, -), CAediting_52573(42300695, -), CAediting_52574(42300701, -), CAediting_52575(42300715, -), CAediting_52576(42300720, -), CAediting_52577(42300725, -), CAediting_52578(42300764, -), CAediting_52579(42301264, -), CAediting_52580(42301288, -), CAediting_52581(42301301, -), CAediting_52582(42301307, -), CAediting_52583(42301333, -), CAediting_52584(42301334, -), CAediting_52585(42301360, -), CAediting_52586(42301370, -), CAediting_52587(42301389, -), CAediting_52588(42301394, -), CAediting_52589(42301405, -), CAediting_52590(42301406, -), CAediting_52591(42301429, -), CAediting_52592(42301476, -), CAediting_52593(42301489, -), CAediting_52594(42306400, -), CAediting_52595(42306414, -), CAediting_52596(42306431, -), CAediting_52597(42306441, -), CAediting_52598(42306483, -), CAediting_52599(42306497, -), CAediting_52600(42306574, -), CAediting_52601(42306593, -), CAediting_52602(42310218, -), CAediting_52603(42310219, -), CAediting_52604(42310257, -), CAediting_52605(42310284, -), CAediting_52606(42310416, -), CAediting_52607(42310544, -), CAediting_52608(42310585, -), CAediting_52609(42310586, -), CAediting_52610(42312337, -), CAediting_52611(42312339, -), CAediting_52612(42312362, -), CAediting_52613(42313143, -), CAediting_52614(42316258, -), CAediting_52615(42316261, -), CAediting_52616(42316266, -), CAediting_52617(42316279, -), CAediting_52618(42316280, -), CAediting_52619(42316283, -), CAediting_52620(42316294, -), CAediting_52621(42316398, -), CAediting_52622(42316443, -), CAediting_52623(42316444, -), CAediting_52624(42318974, -), CAediting_52625(42319106, -), CAediting_52626(42319108, -), CAediting_52627(42319135, -), CAediting_52628(42319173, -), CAediting_52629(42324515, -), CAediting_52630(42324516, -), CAediting_52631(42328052, -), CAediting_52632(42328054, -), CAediting_52633(42328123, -), CAediting_52634(42328132, -), CAediting_52635(42328143, -), CAediting_52636(42328174, -), CAediting_52637(42328187, -), CAediting_52638(42328213, -), CAediting_52639(42328214, -), CAediting_52640(42328234, -), CAediting_52641(42328275, -), CAediting_52642(42328290, -), CAediting_52643(42328291, -), CAediting_52644(42328709, -), CAediting_52645(42328717, -), CAediting_52646(42328718, -), CAediting_52647(42328763, -), CAediting_52648(42328764, -), CAediting_52649(42328772, -), CAediting_52650(42328773, -), CAediting_52651(42328775, -), CAediting_52652(42328778, -), CAediting_52653(42328782, -), CAediting_52654(42328788, -), CAediting_52655(42328799, -), CAediting_52656(42328805, -), CAediting_52657(42328831, -), CAediting_52658(42328832, -), CAediting_52659(42328835, -), CAediting_52660(42328836, -), CAediting_52661(42328837, -), CAediting_52662(42328842, -), CAediting_52663(42328843, -), CAediting_52664(42328844, -), CAediting_52665(42328845, -), CAediting_52666(42328846, -), CAediting_52667(42328849, -), CAediting_52668(42328860, -), CAediting_52669(42328861, -), CAediting_52670(42328862, -), CAediting_52671(42328866, -), CAediting_52672(42328868, -), CAediting_52673(42328880, -), CAediting_52674(42328883, -), CAediting_52675(42328931, -), CAediting_52676(42328938, -), CAediting_52677(42328939, -), CAediting_52678(42328948, -),

Top

RNA editing positional annotations for FOXJ3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_52433chr1_42178564_-UTR3
CAediting_52434chr1_42178622_-UTR3
CAediting_52435chr1_42178655_-UTR3
CAediting_52436chr1_42178673_-UTR3
CAediting_52437chr1_42178676_-UTR3
CAediting_52438chr1_42182545_-intronic
CAediting_52439chr1_42182555_-intronic
CAediting_52440chr1_42182570_-intronic
CAediting_52441chr1_42182574_-intronic
CAediting_52442chr1_42182580_-intronic
CAediting_52443chr1_42182583_-intronic
CAediting_52444chr1_42182590_-intronic
CAediting_52445chr1_42182635_-intronic
CAediting_52446chr1_42182636_-intronic
CAediting_52447chr1_42182649_-intronic
CAediting_52448chr1_42182658_-intronic
CAediting_52449chr1_42182662_-intronic
CAediting_52450chr1_42182665_-intronic
CAediting_52451chr1_42182676_-intronic
CAediting_52452chr1_42182677_-intronic
CAediting_52453chr1_42182691_-intronic
CAediting_52454chr1_42182701_-intronic
CAediting_52455chr1_42182725_-intronic
CAediting_52456chr1_42182730_-intronic
CAediting_52457chr1_42182744_-intronic
CAediting_52458chr1_42182770_-intronic
CAediting_52459chr1_42182771_-intronic
CAediting_52460chr1_42183018_-intronic
CAediting_52461chr1_42183030_-intronic
CAediting_52462chr1_42183058_-intronic
CAediting_52463chr1_42183063_-intronic
CAediting_52464chr1_42183083_-intronic
CAediting_52465chr1_42183103_-intronic
CAediting_52466chr1_42183109_-intronic
CAediting_52467chr1_42183112_-intronic
CAediting_52468chr1_42183118_-intronic
CAediting_52469chr1_42183128_-intronic
CAediting_52470chr1_42183132_-intronic
CAediting_52471chr1_42183136_-intronic
CAediting_52472chr1_42183141_-intronic
CAediting_52473chr1_42183154_-intronic
CAediting_52474chr1_42183180_-intronic
CAediting_52475chr1_42183193_-intronic
CAediting_52476chr1_42183210_-intronic
CAediting_52477chr1_42183212_-intronic
CAediting_52478chr1_42183215_-intronic
CAediting_52479chr1_42183242_-intronic
CAediting_52480chr1_42185386_-intronic
CAediting_52481chr1_42185396_-intronic
CAediting_52482chr1_42185406_-intronic
CAediting_52483chr1_42185422_-intronic
CAediting_52484chr1_42185465_-intronic
CAediting_52485chr1_42185506_-intronic
CAediting_52486chr1_42186883_-intronic
CAediting_52487chr1_42186908_-intronic
CAediting_52488chr1_42186994_-intronic
CAediting_52489chr1_42187079_-intronic
CAediting_52490chr1_42197322_-intronic
CAediting_52491chr1_42200521_-intronic
CAediting_52492chr1_42200616_-intronic
CAediting_52493chr1_42203779_-intronic
CAediting_52494chr1_42226446_-intronic
CAediting_52495chr1_42226556_-intronic
CAediting_52496chr1_42235598_-intronic
CAediting_52497chr1_42235678_-intronic
CAediting_52498chr1_42235679_-intronic
CAediting_52499chr1_42235805_-intronic
CAediting_52500chr1_42235852_-intronic
CAediting_52501chr1_42235975_-intronic
CAediting_52502chr1_42236289_-intronic
CAediting_52503chr1_42236329_-intronic
CAediting_52504chr1_42236331_-intronic
CAediting_52505chr1_42236415_-intronic
CAediting_52506chr1_42236467_-intronic
CAediting_52507chr1_42236468_-intronic
CAediting_52508chr1_42237119_-intronic
CAediting_52509chr1_42237182_-intronic
CAediting_52510chr1_42237186_-intronic
CAediting_52511chr1_42238130_-intronic
CAediting_52512chr1_42238196_-intronic
CAediting_52513chr1_42238210_-intronic
CAediting_52514chr1_42238239_-intronic
CAediting_52515chr1_42238298_-intronic
CAediting_52516chr1_42248832_-intronic
CAediting_52517chr1_42248970_-intronic
CAediting_52518chr1_42248982_-intronic
CAediting_52519chr1_42249009_-intronic
CAediting_52520chr1_42249045_-intronic
CAediting_52521chr1_42249052_-intronic
CAediting_52522chr1_42249053_-intronic
CAediting_52523chr1_42249066_-intronic
CAediting_52524chr1_42249075_-intronic
CAediting_52525chr1_42249082_-intronic
CAediting_52526chr1_42249120_-intronic
CAediting_52527chr1_42249173_-intronic
CAediting_52528chr1_42271748_-intronic
CAediting_52529chr1_42287218_-intronic
CAediting_52530chr1_42287258_-intronic
CAediting_52531chr1_42290023_-intronic
CAediting_52532chr1_42290050_-intronic
CAediting_52533chr1_42290075_-intronic
CAediting_52534chr1_42290076_-intronic
CAediting_52535chr1_42290130_-intronic
CAediting_52536chr1_42290726_-intronic
CAediting_52537chr1_42290730_-intronic
CAediting_52538chr1_42290750_-intronic
CAediting_52539chr1_42290751_-intronic
CAediting_52540chr1_42290752_-intronic
CAediting_52541chr1_42290755_-intronic
CAediting_52542chr1_42290765_-intronic
CAediting_52543chr1_42290805_-intronic
CAediting_52544chr1_42290806_-intronic
CAediting_52545chr1_42290809_-intronic
CAediting_52546chr1_42293018_-intronic
CAediting_52547chr1_42295614_-intronic
CAediting_52548chr1_42295618_-intronic
CAediting_52549chr1_42295652_-intronic
CAediting_52550chr1_42295656_-intronic
CAediting_52551chr1_42295657_-intronic
CAediting_52552chr1_42295723_-intronic
CAediting_52553chr1_42296712_-intronic
CAediting_52554chr1_42296768_-intronic
CAediting_52555chr1_42297203_-intronic
CAediting_52556chr1_42297255_-intronic
CAediting_52557chr1_42297258_-intronic
CAediting_52558chr1_42297260_-intronic
CAediting_52559chr1_42300016_-intronic
CAediting_52560chr1_42300038_-intronic
CAediting_52561chr1_42300117_-intronic
CAediting_52562chr1_42300558_-intronic
CAediting_52563chr1_42300559_-intronic
CAediting_52564chr1_42300564_-intronic
CAediting_52565chr1_42300572_-intronic
CAediting_52566chr1_42300573_-intronic
CAediting_52567chr1_42300582_-intronic
CAediting_52568chr1_42300608_-intronic
CAediting_52569chr1_42300648_-intronic
CAediting_52570chr1_42300656_-intronic
CAediting_52571chr1_42300666_-intronic
CAediting_52572chr1_42300669_-intronic
CAediting_52573chr1_42300695_-intronic
CAediting_52574chr1_42300701_-intronic
CAediting_52575chr1_42300715_-intronic
CAediting_52576chr1_42300720_-intronic
CAediting_52577chr1_42300725_-intronic
CAediting_52578chr1_42300764_-intronic
CAediting_52579chr1_42301264_-intronic
CAediting_52580chr1_42301288_-intronic
CAediting_52581chr1_42301301_-intronic
CAediting_52582chr1_42301307_-intronic
CAediting_52583chr1_42301333_-intronic
CAediting_52584chr1_42301334_-intronic
CAediting_52585chr1_42301360_-intronic
CAediting_52586chr1_42301370_-intronic
CAediting_52587chr1_42301389_-intronic
CAediting_52588chr1_42301394_-intronic
CAediting_52589chr1_42301405_-intronic
CAediting_52590chr1_42301406_-intronic
CAediting_52591chr1_42301429_-intronic
CAediting_52592chr1_42301476_-intronic
CAediting_52593chr1_42301489_-intronic
CAediting_52594chr1_42306400_-intronic
CAediting_52595chr1_42306414_-intronic
CAediting_52596chr1_42306431_-intronic
CAediting_52597chr1_42306441_-intronic
CAediting_52598chr1_42306483_-intronic
CAediting_52599chr1_42306497_-intronic
CAediting_52600chr1_42306574_-intronic
CAediting_52601chr1_42306593_-intronic
CAediting_52602chr1_42310218_-intronic
CAediting_52603chr1_42310219_-intronic
CAediting_52604chr1_42310257_-intronic
CAediting_52605chr1_42310284_-intronic
CAediting_52606chr1_42310416_-intronic
CAediting_52607chr1_42310544_-intronic
CAediting_52608chr1_42310585_-intronic
CAediting_52609chr1_42310586_-intronic
CAediting_52610chr1_42312337_-intronic
CAediting_52611chr1_42312339_-intronic
CAediting_52612chr1_42312362_-intronic
CAediting_52613chr1_42313143_-intronic
CAediting_52614chr1_42316258_-intronic
CAediting_52615chr1_42316261_-intronic
CAediting_52616chr1_42316266_-intronic
CAediting_52617chr1_42316279_-intronic
CAediting_52618chr1_42316280_-intronic
CAediting_52619chr1_42316283_-intronic
CAediting_52620chr1_42316294_-intronic
CAediting_52621chr1_42316398_-intronic
CAediting_52622chr1_42316443_-intronic
CAediting_52623chr1_42316444_-intronic
CAediting_52624chr1_42318974_-intronic
CAediting_52625chr1_42319106_-intronic
CAediting_52626chr1_42319108_-intronic
CAediting_52627chr1_42319135_-intronic
CAediting_52628chr1_42319173_-intronic
CAediting_52629chr1_42324515_-intronic
CAediting_52630chr1_42324516_-intronic
CAediting_52631chr1_42328052_-intronic
CAediting_52632chr1_42328054_-intronic
CAediting_52633chr1_42328123_-intronic
CAediting_52634chr1_42328132_-intronic
CAediting_52635chr1_42328143_-intronic
CAediting_52636chr1_42328174_-intronic
CAediting_52637chr1_42328187_-intronic
CAediting_52638chr1_42328213_-intronic
CAediting_52639chr1_42328214_-intronic
CAediting_52640chr1_42328234_-intronic
CAediting_52641chr1_42328275_-intronic
CAediting_52642chr1_42328290_-intronic
CAediting_52643chr1_42328291_-intronic
CAediting_52644chr1_42328709_-intronic
CAediting_52645chr1_42328717_-intronic
CAediting_52646chr1_42328718_-intronic
CAediting_52647chr1_42328763_-intronic
CAediting_52648chr1_42328764_-intronic
CAediting_52649chr1_42328772_-intronic
CAediting_52650chr1_42328773_-intronic
CAediting_52651chr1_42328775_-intronic
CAediting_52652chr1_42328778_-intronic
CAediting_52653chr1_42328782_-intronic
CAediting_52654chr1_42328788_-intronic
CAediting_52655chr1_42328799_-intronic
CAediting_52656chr1_42328805_-intronic
CAediting_52657chr1_42328831_-intronic
CAediting_52658chr1_42328832_-intronic
CAediting_52659chr1_42328835_-intronic
CAediting_52660chr1_42328836_-intronic
CAediting_52661chr1_42328837_-intronic
CAediting_52662chr1_42328842_-intronic
CAediting_52663chr1_42328843_-intronic
CAediting_52664chr1_42328844_-intronic
CAediting_52665chr1_42328845_-intronic
CAediting_52666chr1_42328846_-intronic
CAediting_52667chr1_42328849_-intronic
CAediting_52668chr1_42328860_-intronic
CAediting_52669chr1_42328861_-intronic
CAediting_52670chr1_42328862_-intronic
CAediting_52671chr1_42328866_-intronic
CAediting_52672chr1_42328868_-intronic
CAediting_52673chr1_42328880_-intronic
CAediting_52674chr1_42328883_-intronic
CAediting_52675chr1_42328931_-intronic
CAediting_52676chr1_42328938_-intronic
CAediting_52677chr1_42328939_-intronic
CAediting_52678chr1_42328948_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_52433chr1_42178564_-SINEAluAluSx
CAediting_52434chr1_42178622_-SINEAluAluSx
CAediting_52435chr1_42178655_-SINEAluAluSx
CAediting_52436chr1_42178673_-SINEAluAluSx
CAediting_52437chr1_42178676_-SINEAluAluSx
CAediting_52438chr1_42182545_-SINEAluAluSz
CAediting_52439chr1_42182555_-SINEAluAluSz
CAediting_52440chr1_42182570_-SINEAluAluSz
CAediting_52441chr1_42182574_-SINEAluAluSz
CAediting_52442chr1_42182580_-SINEAluAluSz
CAediting_52443chr1_42182583_-SINEAluAluSz
CAediting_52444chr1_42182590_-SINEAluAluSz
CAediting_52445chr1_42182635_-SINEAluAluSz
CAediting_52446chr1_42182636_-SINEAluAluSz
CAediting_52447chr1_42182649_-SINEAluAluSz
CAediting_52448chr1_42182658_-SINEAluAluSz
CAediting_52449chr1_42182662_-SINEAluAluSz
CAediting_52450chr1_42182665_-SINEAluAluSz
CAediting_52451chr1_42182676_-SINEAluAluSz
CAediting_52452chr1_42182677_-SINEAluAluSz
CAediting_52453chr1_42182691_-SINEAluAluSz
CAediting_52454chr1_42182701_-SINEAluAluSz
CAediting_52455chr1_42182725_-SINEAluAluSz
CAediting_52456chr1_42182730_-SINEAluAluSz
CAediting_52457chr1_42182744_-SINEAluAluSz
CAediting_52458chr1_42182770_-SINEAluAluSz
CAediting_52459chr1_42182771_-SINEAluAluSz
CAediting_52460chr1_42183018_-SINEAluAluSz6
CAediting_52461chr1_42183030_-SINEAluAluSz6
CAediting_52462chr1_42183058_-SINEAluAluSz6
CAediting_52463chr1_42183063_-SINEAluAluSz6
CAediting_52464chr1_42183083_-SINEAluAluSz6
CAediting_52465chr1_42183103_-SINEAluAluSz6
CAediting_52466chr1_42183109_-SINEAluAluSz6
CAediting_52467chr1_42183112_-SINEAluAluSz6
CAediting_52468chr1_42183118_-SINEAluAluSz6
CAediting_52469chr1_42183128_-SINEAluAluSz6
CAediting_52470chr1_42183132_-SINEAluAluSz6
CAediting_52471chr1_42183136_-SINEAluAluSz6
CAediting_52472chr1_42183141_-SINEAluAluSz6
CAediting_52473chr1_42183154_-SINEAluAluSz6
CAediting_52474chr1_42183180_-SINEAluAluSz6
CAediting_52475chr1_42183193_-SINEAluAluSz6
CAediting_52476chr1_42183210_-SINEAluAluSz6
CAediting_52477chr1_42183212_-SINEAluAluSz6
CAediting_52478chr1_42183215_-SINEAluAluSz6
CAediting_52479chr1_42183242_-SINEAluAluSz6
CAediting_52480chr1_42185386_-SINEAluAluY
CAediting_52481chr1_42185396_-SINEAluAluY
CAediting_52482chr1_42185406_-SINEAluAluY
CAediting_52483chr1_42185422_-SINEAluAluY
CAediting_52484chr1_42185465_-SINEAluAluY
CAediting_52485chr1_42185506_-SINEAluAluY
CAediting_52486chr1_42186883_-SINEAluAluSx
CAediting_52487chr1_42186908_-SINEAluAluSx
CAediting_52488chr1_42186994_-SINEAluAluSx
CAediting_52489chr1_42187079_-SINEAluAluSx
CAediting_52490chr1_42197322_-SINEAluFLAM_C
CAediting_52491chr1_42200521_-SINEAluAluSg
CAediting_52492chr1_42200616_-SINEAluAluSg
CAediting_52493chr1_42203779_-SINEAluAluSx1
CAediting_52494chr1_42226446_-SINEAluAluSx
CAediting_52495chr1_42226556_-SINEAluAluSx
CAediting_52496chr1_42235598_-SINEAluAluSx1
CAediting_52497chr1_42235678_-SINEAluAluSx1
CAediting_52498chr1_42235679_-SINEAluAluSx1
CAediting_52499chr1_42235805_-SINEAluAluSx1
CAediting_52501chr1_42235975_-SINEAluAluJb
CAediting_52502chr1_42236289_-SINEAluAluJr4
CAediting_52503chr1_42236329_-SINEAluAluJr4
CAediting_52504chr1_42236331_-SINEAluAluJr4
CAediting_52505chr1_42236415_-SINEAluAluJr4
CAediting_52506chr1_42236467_-SINEAluAluJr4
CAediting_52507chr1_42236468_-SINEAluAluJr4
CAediting_52508chr1_42237119_-SINEAluAluY
CAediting_52509chr1_42237182_-SINEAluAluY
CAediting_52510chr1_42237186_-SINEAluAluY
CAediting_52511chr1_42238130_-SINEAluAluSz
CAediting_52512chr1_42238196_-SINEAluAluSz
CAediting_52513chr1_42238210_-SINEAluAluSz
CAediting_52514chr1_42238239_-SINEAluAluSz
CAediting_52515chr1_42238298_-SINEAluAluSz
CAediting_52516chr1_42248832_-LINEL1L1PA8
CAediting_52517chr1_42248970_-LINEL1L1PA8
CAediting_52518chr1_42248982_-LINEL1L1PA8
CAediting_52519chr1_42249009_-LINEL1L1PA8
CAediting_52520chr1_42249045_-LINEL1L1PA8
CAediting_52521chr1_42249052_-LINEL1L1PA8
CAediting_52522chr1_42249053_-LINEL1L1PA8
CAediting_52523chr1_42249066_-LINEL1L1PA8
CAediting_52524chr1_42249075_-LINEL1L1PA8
CAediting_52525chr1_42249082_-LINEL1L1PA8
CAediting_52526chr1_42249120_-LINEL1L1PA8
CAediting_52527chr1_42249173_-LINEL1L1PA8
CAediting_52528chr1_42271748_-SINEAluAluJr
CAediting_52529chr1_42287218_-SINEAluAluSg
CAediting_52530chr1_42287258_-SINEAluAluSg
CAediting_52546chr1_42293018_-SINEAluAluJb
CAediting_52547chr1_42295614_-SINEAluAluSx
CAediting_52548chr1_42295618_-SINEAluAluSx
CAediting_52549chr1_42295652_-SINEAluAluSx
CAediting_52550chr1_42295656_-SINEAluAluSx
CAediting_52551chr1_42295657_-SINEAluAluSx
CAediting_52552chr1_42295723_-SINEAluAluSx
CAediting_52553chr1_42296712_-LINEL1L1PB4
CAediting_52554chr1_42296768_-LINEL1L1PB4
CAediting_52555chr1_42297203_-LINEL1L1PB4
CAediting_52556chr1_42297255_-LINEL1L1PB4
CAediting_52557chr1_42297258_-LINEL1L1PB4
CAediting_52558chr1_42297260_-LINEL1L1PB4
CAediting_52559chr1_42300016_-SINEAluAluSx3
CAediting_52560chr1_42300038_-SINEAluAluSx3
CAediting_52561chr1_42300117_-SINEAluAluSx3
CAediting_52562chr1_42300558_-SINEAluAluJo
CAediting_52563chr1_42300559_-SINEAluAluJo
CAediting_52564chr1_42300564_-SINEAluAluJo
CAediting_52565chr1_42300572_-SINEAluAluJo
CAediting_52566chr1_42300573_-SINEAluAluJo
CAediting_52567chr1_42300582_-SINEAluAluJo
CAediting_52568chr1_42300608_-SINEAluAluJo
CAediting_52569chr1_42300648_-SINEAluAluJo
CAediting_52570chr1_42300656_-SINEAluAluJo
CAediting_52571chr1_42300666_-SINEAluAluJo
CAediting_52572chr1_42300669_-SINEAluAluJo
CAediting_52573chr1_42300695_-SINEAluAluJo
CAediting_52574chr1_42300701_-SINEAluAluJo
CAediting_52575chr1_42300715_-SINEAluAluJo
CAediting_52576chr1_42300720_-SINEAluAluJo
CAediting_52577chr1_42300725_-SINEAluAluJo
CAediting_52578chr1_42300764_-SINEAluAluJo
CAediting_52579chr1_42301264_-SINEAluAluSz
CAediting_52580chr1_42301288_-SINEAluAluSz
CAediting_52581chr1_42301301_-SINEAluAluSz
CAediting_52582chr1_42301307_-SINEAluAluSz
CAediting_52583chr1_42301333_-SINEAluAluSz
CAediting_52584chr1_42301334_-SINEAluAluSz
CAediting_52585chr1_42301360_-SINEAluAluSz
CAediting_52586chr1_42301370_-SINEAluAluSz
CAediting_52587chr1_42301389_-SINEAluAluSz
CAediting_52588chr1_42301394_-SINEAluAluSz
CAediting_52589chr1_42301405_-SINEAluAluSz
CAediting_52590chr1_42301406_-SINEAluAluSz
CAediting_52591chr1_42301429_-SINEAluAluSz
CAediting_52592chr1_42301476_-SINEAluAluSz
CAediting_52593chr1_42301489_-SINEAluAluSz
CAediting_52594chr1_42306400_-SINEAluAluSx3
CAediting_52595chr1_42306414_-SINEAluAluSx3
CAediting_52596chr1_42306431_-SINEAluAluSx3
CAediting_52597chr1_42306441_-SINEAluAluSx3
CAediting_52598chr1_42306483_-SINEAluAluSx3
CAediting_52599chr1_42306497_-SINEAluAluSx3
CAediting_52600chr1_42306574_-SINEAluAluSx3
CAediting_52601chr1_42306593_-SINEAluAluSx3
CAediting_52602chr1_42310218_-SINEAluAluSc8
CAediting_52603chr1_42310219_-SINEAluAluSc8
CAediting_52604chr1_42310257_-SINEAluAluSc8
CAediting_52605chr1_42310284_-SINEAluAluSc8
CAediting_52606chr1_42310416_-SINEAluAluSc8
CAediting_52607chr1_42310544_-SINEAluAluSx
CAediting_52608chr1_42310585_-SINEAluAluSx
CAediting_52609chr1_42310586_-SINEAluAluSx
CAediting_52610chr1_42312337_-SINEAluAluJo
CAediting_52611chr1_42312339_-SINEAluAluJo
CAediting_52612chr1_42312362_-DNAhAT-CharlieMER102b
CAediting_52613chr1_42313143_-SINEAluAluSq
CAediting_52614chr1_42316258_-SINEAluAluJr
CAediting_52615chr1_42316261_-SINEAluAluJr
CAediting_52616chr1_42316266_-SINEAluAluJr
CAediting_52617chr1_42316279_-SINEAluAluJr
CAediting_52618chr1_42316280_-SINEAluAluJr
CAediting_52619chr1_42316283_-SINEAluAluJr
CAediting_52620chr1_42316294_-SINEAluAluJr
CAediting_52621chr1_42316398_-SINEAluAluJr
CAediting_52622chr1_42316443_-SINEAluAluJr
CAediting_52623chr1_42316444_-SINEAluAluJr
CAediting_52624chr1_42318974_-SINEAluAluJo
CAediting_52625chr1_42319106_-SINEAluAluJo
CAediting_52626chr1_42319108_-SINEAluAluJo
CAediting_52627chr1_42319135_-SINEAluAluJo
CAediting_52628chr1_42319173_-SINEAluAluJo
CAediting_52629chr1_42324515_-DNATcMar-TiggerTigger3c
CAediting_52630chr1_42324516_-DNATcMar-TiggerTigger3c
CAediting_52631chr1_42328052_-SINEAluAluJr
CAediting_52632chr1_42328054_-SINEAluAluJr
CAediting_52633chr1_42328123_-SINEAluAluJr
CAediting_52634chr1_42328132_-SINEAluAluJr
CAediting_52635chr1_42328143_-SINEAluAluJr
CAediting_52636chr1_42328174_-SINEAluAluJr
CAediting_52637chr1_42328187_-SINEAluAluJr
CAediting_52638chr1_42328213_-SINEAluAluJr
CAediting_52639chr1_42328214_-SINEAluAluJr
CAediting_52640chr1_42328234_-SINEAluAluJr
CAediting_52641chr1_42328275_-SINEAluAluJr
CAediting_52642chr1_42328290_-SINEAluAluJr
CAediting_52643chr1_42328291_-SINEAluAluJr
CAediting_52644chr1_42328709_-SINEAluAluSx1
CAediting_52645chr1_42328717_-SINEAluAluSx1
CAediting_52646chr1_42328718_-SINEAluAluSx1
CAediting_52647chr1_42328763_-SINEAluAluSx1
CAediting_52648chr1_42328764_-SINEAluAluSx1
CAediting_52649chr1_42328772_-SINEAluAluSx1
CAediting_52650chr1_42328773_-SINEAluAluSx1
CAediting_52651chr1_42328775_-SINEAluAluSx1
CAediting_52652chr1_42328778_-SINEAluAluSx1
CAediting_52653chr1_42328782_-SINEAluAluSx1
CAediting_52654chr1_42328788_-SINEAluAluSx1
CAediting_52655chr1_42328799_-SINEAluAluSx1
CAediting_52656chr1_42328805_-SINEAluAluSx1
CAediting_52657chr1_42328831_-SINEAluAluSx1
CAediting_52658chr1_42328832_-SINEAluAluSx1
CAediting_52659chr1_42328835_-SINEAluAluSx1
CAediting_52660chr1_42328836_-SINEAluAluSx1
CAediting_52661chr1_42328837_-SINEAluAluSx1
CAediting_52662chr1_42328842_-SINEAluAluSx1
CAediting_52663chr1_42328843_-SINEAluAluSx1
CAediting_52664chr1_42328844_-SINEAluAluSx1
CAediting_52665chr1_42328845_-SINEAluAluSx1
CAediting_52666chr1_42328846_-SINEAluAluSx1
CAediting_52667chr1_42328849_-SINEAluAluSx1
CAediting_52668chr1_42328860_-SINEAluAluSx1
CAediting_52669chr1_42328861_-SINEAluAluSx1
CAediting_52670chr1_42328862_-SINEAluAluSx1
CAediting_52671chr1_42328866_-SINEAluAluSx1
CAediting_52672chr1_42328868_-SINEAluAluSx1
CAediting_52673chr1_42328880_-SINEAluAluSx1
CAediting_52674chr1_42328883_-SINEAluAluSx1
CAediting_52675chr1_42328931_-SINEAluAluSx1
CAediting_52676chr1_42328938_-SINEAluAluSx1
CAediting_52677chr1_42328939_-SINEAluAluSx1
CAediting_52678chr1_42328948_-SINEAluAluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for FOXJ3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000198815.7.FOXJ3.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000198815.7.FOXJ3.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for FOXJ3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for FOXJ3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for FOXJ3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372571hsa-miR-4485-5p42178563421785697mer-m84217856242178577140.00-17.11
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372571hsa-miR-607842178564421785707mer-m84217856342178582156.00-25.72
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372572hsa-miR-4485-5p42178563421785697mer-m84217856242178577140.00-17.11
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372572hsa-miR-607842178564421785707mer-m84217856342178582156.00-25.72
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372573hsa-miR-4485-5p42178563421785697mer-m84217856242178577140.00-17.11
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372573hsa-miR-607842178564421785707mer-m84217856342178582156.00-25.72
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000545068hsa-miR-4485-5p42178563421785697mer-m84217856242178577140.00-17.11
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000545068hsa-miR-607842178564421785707mer-m84217856342178582156.00-25.72
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000361776hsa-miR-4485-5p42178563421785697mer-m84217856242178577140.00-17.11
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000361776hsa-miR-607842178564421785707mer-m84217856342178582156.00-25.72
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000372571hsa-miR-4691-3p42178669421786757mer-m84217866842178695150.00-26.36
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000372572hsa-miR-4691-3p42178669421786757mer-m84217866842178695150.00-26.36
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000372573hsa-miR-4691-3p42178669421786757mer-m84217866842178695150.00-26.36
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000545068hsa-miR-4691-3p42178669421786757mer-m84217866842178695150.00-26.36
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000361776hsa-miR-4691-3p42178669421786757mer-m84217866842178695150.00-26.36
CAediting_52437chr1_42178676_-ENSG00000198815.7ENST00000372571hsa-miR-1247-3p42178675421786817mer-m84217867442178696160.00-27.57
CAediting_52437chr1_42178676_-ENSG00000198815.7ENST00000372572hsa-miR-1247-3p42178675421786817mer-m84217867442178696160.00-27.57
CAediting_52437chr1_42178676_-ENSG00000198815.7ENST00000372573hsa-miR-1247-3p42178675421786817mer-m84217867442178696160.00-27.57
CAediting_52437chr1_42178676_-ENSG00000198815.7ENST00000545068hsa-miR-1247-3p42178675421786817mer-m84217867442178696160.00-27.57
CAediting_52437chr1_42178676_-ENSG00000198815.7ENST00000361776hsa-miR-1247-3p42178675421786817mer-m84217867442178696160.00-27.57
CAediting_52434chr1_42178622_-ENSG00000198815.7ENST00000372571hsa-miR-469842178622421786276mer4217862142178643149.00-14.79
CAediting_52434chr1_42178622_-ENSG00000198815.7ENST00000372572hsa-miR-469842178622421786276mer4217862142178643149.00-14.79
CAediting_52434chr1_42178622_-ENSG00000198815.7ENST00000372573hsa-miR-469842178622421786276mer4217862142178643149.00-14.79
CAediting_52434chr1_42178622_-ENSG00000198815.7ENST00000545068hsa-miR-469842178622421786276mer4217862142178643149.00-14.79
CAediting_52434chr1_42178622_-ENSG00000198815.7ENST00000361776hsa-miR-469842178622421786276mer4217862142178643149.00-14.79
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000372571hsa-miR-93342178652421786587mer-m84217865142178671142.00-21.29
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000372572hsa-miR-93342178652421786587mer-m84217865142178671142.00-21.29
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000372573hsa-miR-93342178652421786587mer-m84217865142178671142.00-21.29
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000545068hsa-miR-93342178652421786587mer-m84217865142178671142.00-21.29
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000361776hsa-miR-93342178652421786587mer-m84217865142178671142.00-21.29

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372571hsa-miR-449442178559421785657mer-m84217855842178577150-17.12
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372571hsa-miR-5002-3p42178561421785677mer-m84217856042178581150-14.24
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000372571hsa-miR-500a-3p42178655421786617mer-m84217865442178675148-16.85
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000372571hsa-miR-569042178669421786757mer-m84217866842178688145-16.75
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372572hsa-miR-449442178559421785657mer-m84217855842178577150-17.12
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372572hsa-miR-5002-3p42178561421785677mer-m84217856042178581150-14.24
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000372572hsa-miR-500a-3p42178655421786617mer-m84217865442178675148-16.85
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000372572hsa-miR-569042178669421786757mer-m84217866842178688145-16.75
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372573hsa-miR-449442178559421785657mer-m84217855842178577150-17.12
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000372573hsa-miR-5002-3p42178561421785677mer-m84217856042178581150-14.24
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000372573hsa-miR-500a-3p42178655421786617mer-m84217865442178675148-16.85
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000372573hsa-miR-569042178669421786757mer-m84217866842178688145-16.75
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000545068hsa-miR-449442178559421785657mer-m84217855842178577150-17.12
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000545068hsa-miR-5002-3p42178561421785677mer-m84217856042178581150-14.24
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000545068hsa-miR-500a-3p42178655421786617mer-m84217865442178675148-16.85
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000545068hsa-miR-569042178669421786757mer-m84217866842178688145-16.75
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000361776hsa-miR-449442178559421785657mer-m84217855842178577150-17.12
CAediting_52433chr1_42178564_-ENSG00000198815.7ENST00000361776hsa-miR-5002-3p42178561421785677mer-m84217856042178581150-14.24
CAediting_52435chr1_42178655_-ENSG00000198815.7ENST00000361776hsa-miR-500a-3p42178655421786617mer-m84217865442178675148-16.85
CAediting_52436chr1_42178673_-ENSG00000198815.7ENST00000361776hsa-miR-569042178669421786757mer-m84217866842178688145-16.75

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372571hsa-miR-548aa42177895421779028mer-1a4217789542177919148-11.15
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372571hsa-miR-548aa42176776421767827mer-m84217677542176799156-11.88
CAediting_228905chr2_188297554_+ENSG00000198815.7ENST00000372571hsa-miR-561-3p42178576421785827mer-m84217857542178596146-11.22
CAediting_580943chr7_100356700_+ENSG00000198815.7ENST00000372571hsa-miR-6840-3p42178707421787137mer-m84217870642178722141-27.37
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372572hsa-miR-548aa42177895421779028mer-1a4217789542177919148-11.15
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372572hsa-miR-548aa42176776421767827mer-m84217677542176799156-11.88
CAediting_228905chr2_188297554_+ENSG00000198815.7ENST00000372572hsa-miR-561-3p42178576421785827mer-m84217857542178596146-11.22
CAediting_580943chr7_100356700_+ENSG00000198815.7ENST00000372572hsa-miR-6840-3p42178707421787137mer-m84217870642178722141-27.37
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372573hsa-miR-548aa42177895421779028mer-1a4217789542177919148-11.15
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372573hsa-miR-548aa42176776421767827mer-m84217677542176799156-11.88
CAediting_228905chr2_188297554_+ENSG00000198815.7ENST00000372573hsa-miR-561-3p42178576421785827mer-m84217857542178596146-11.22
CAediting_580943chr7_100356700_+ENSG00000198815.7ENST00000372573hsa-miR-6840-3p42178707421787137mer-m84217870642178722141-27.37
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000545068hsa-miR-548aa42177895421779028mer-1a4217789542177919148-11.15
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000545068hsa-miR-548aa42176776421767827mer-m84217677542176799156-11.88
CAediting_228905chr2_188297554_+ENSG00000198815.7ENST00000545068hsa-miR-561-3p42178576421785827mer-m84217857542178596146-11.22
CAediting_580943chr7_100356700_+ENSG00000198815.7ENST00000545068hsa-miR-6840-3p42178707421787137mer-m84217870642178722141-27.37
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000361776hsa-miR-548aa42177895421779028mer-1a4217789542177919148-11.15
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000361776hsa-miR-548aa42176776421767827mer-m84217677542176799156-11.88
CAediting_228905chr2_188297554_+ENSG00000198815.7ENST00000361776hsa-miR-561-3p42178576421785827mer-m84217857542178596146-11.22
CAediting_580943chr7_100356700_+ENSG00000198815.7ENST00000361776hsa-miR-6840-3p42178707421787137mer-m84217870642178722141-27.37
CAediting_1524209chrX_134546392_-ENSG00000198815.7ENST00000372571hsa-miR-503-5p42176599421766057mer-1a4217659942176618140-24.27
CAediting_1524209chrX_134546392_-ENSG00000198815.7ENST00000372572hsa-miR-503-5p42176599421766057mer-1a4217659942176618140-24.27
CAediting_1524209chrX_134546392_-ENSG00000198815.7ENST00000372573hsa-miR-503-5p42176599421766057mer-1a4217659942176618140-24.27
CAediting_1524209chrX_134546392_-ENSG00000198815.7ENST00000545068hsa-miR-503-5p42176599421766057mer-1a4217659942176618140-24.27
CAediting_1524209chrX_134546392_-ENSG00000198815.7ENST00000361776hsa-miR-503-5p42176599421766057mer-1a4217659942176618140-24.27

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372571hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372571hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229413chr17_67471544_+ENSG00000198815.7ENST00000372571hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372571hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372571hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1351755chr19_40282625_-ENSG00000198815.7ENST00000372571hsa-miR-64142179292421792987mer-m84217929142179315155-13.15
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372572hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372572hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229413chr17_67471544_+ENSG00000198815.7ENST00000372572hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372572hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372572hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1351755chr19_40282625_-ENSG00000198815.7ENST00000372572hsa-miR-64142179292421792987mer-m84217929142179315155-13.15
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372573hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372573hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229413chr17_67471544_+ENSG00000198815.7ENST00000372573hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000372573hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000372573hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1351755chr19_40282625_-ENSG00000198815.7ENST00000372573hsa-miR-64142179292421792987mer-m84217929142179315155-13.15
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000545068hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000545068hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229413chr17_67471544_+ENSG00000198815.7ENST00000545068hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000545068hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000545068hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1351755chr19_40282625_-ENSG00000198815.7ENST00000545068hsa-miR-64142179292421792987mer-m84217929142179315155-13.15
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000361776hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000361776hsa-miR-548aa42178122421781276mer4217810442178128144-18.57
CAediting_1229413chr17_67471544_+ENSG00000198815.7ENST00000361776hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229414chr17_67471546_+ENSG00000198815.7ENST00000361776hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1229415chr17_67471547_+ENSG00000198815.7ENST00000361776hsa-miR-548aa42179049421790557mer-m84217904842179075147-8.48
CAediting_1351755chr19_40282625_-ENSG00000198815.7ENST00000361776hsa-miR-64142179292421792987mer-m84217929142179315155-13.15

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FOXJ3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000361346.4protein_codingSoverviewSoverview
ENST00000361776.4protein_codingSoverviewSoverview
ENST00000372571.4protein_codingSoverviewSoverview
ENST00000372572.4protein_codingSoverviewSoverview
ENST00000372573.4protein_codingSoverviewSoverview
ENST00000545068.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_52433ENST00000361346.4chr1_42178564_--1517.90-1518.70-1520.80
CAediting_52434ENST00000361346.4chr1_42178622_--1518.00-1518.70-1520.80
CAediting_52435ENST00000361346.4chr1_42178655_--1518.70-1518.70-1520.80
CAediting_52436ENST00000361346.4chr1_42178673_--1519.00-1518.70-1520.80
CAediting_52437ENST00000361346.4chr1_42178676_--1522.30-1518.70-1520.80
CAediting_52433ENST00000361776.4chr1_42178564_--1481.30-1482.10-1484.20
CAediting_52434ENST00000361776.4chr1_42178622_--1481.40-1482.10-1484.20
CAediting_52435ENST00000361776.4chr1_42178655_--1482.10-1482.10-1484.20
CAediting_52436ENST00000361776.4chr1_42178673_--1482.80-1482.10-1484.20
CAediting_52437ENST00000361776.4chr1_42178676_--1485.70-1482.10-1484.20
CAediting_52433ENST00000372571.4chr1_42178564_--1249.00-1249.80-1251.90
CAediting_52434ENST00000372571.4chr1_42178622_--1249.10-1249.80-1251.90
CAediting_52435ENST00000372571.4chr1_42178655_--1249.80-1249.80-1251.90
CAediting_52436ENST00000372571.4chr1_42178673_--1250.10-1249.80-1251.90
CAediting_52437ENST00000372571.4chr1_42178676_--1253.40-1249.80-1251.90
CAediting_52433ENST00000372572.4chr1_42178564_--1496.00-1496.80-1498.90
CAediting_52434ENST00000372572.4chr1_42178622_--1496.10-1496.80-1498.90
CAediting_52435ENST00000372572.4chr1_42178655_--1496.80-1496.80-1498.90
CAediting_52436ENST00000372572.4chr1_42178673_--1497.10-1496.80-1498.90
CAediting_52437ENST00000372572.4chr1_42178676_--1500.40-1496.80-1498.90
CAediting_52433ENST00000372573.4chr1_42178564_--1516.70-1517.50-1519.60
CAediting_52434ENST00000372573.4chr1_42178622_--1516.80-1517.50-1519.60
CAediting_52435ENST00000372573.4chr1_42178655_--1517.50-1517.50-1519.60
CAediting_52436ENST00000372573.4chr1_42178673_--1517.90-1517.50-1519.60
CAediting_52437ENST00000372573.4chr1_42178676_--1521.10-1517.50-1519.60
CAediting_52433ENST00000545068.4chr1_42178564_--1442.80-1443.60-1445.70
CAediting_52434ENST00000545068.4chr1_42178622_--1442.90-1443.60-1445.70
CAediting_52435ENST00000545068.4chr1_42178655_--1443.60-1443.60-1445.70
CAediting_52436ENST00000545068.4chr1_42178673_--1443.90-1443.60-1445.70
CAediting_52437ENST00000545068.4chr1_42178676_--1447.20-1443.60-1445.70

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Relation with ADAR for FOXJ3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for FOXJ3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for FOXJ3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for FOXJ3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for FOXJ3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource