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Editing gene: NSUN6 (CAeditome ID:221078)

Gene summary for NSUN6

Gene summary

Gene information	Gene symbol	NSUN6
	Gene ID	221078
	Gene name	NOP2/Sun RNA methyltransferase 6
	Synonyms	4933414E04Rik\|ARL5B-AS1\|NOPD1
	Cytomap	10p12.31
	Type of gene	protein-coding
	Description	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6ARL5B antisense RNA 1NOL1/NOP2/Sun and PUA domain-containing protein 1NOL1/NOP2/Sun domain family, member 6NOP2/Sun RNA methyltransferase family member 6NOP2/Sun domain family, member 6nucleolar protei
	Modification date	20210518
	UniProtAcc	Q8TEA1
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
NSUN6	GO:0000049	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6	26160102
NSUN6	GO:0000049	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6	28531330
NSUN6	GO:0016428	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6	26160102
NSUN6	GO:0016428	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6	27703015
NSUN6	GO:0016428	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6	28531330
NSUN6	GO:0002946	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6	26160102
NSUN6	GO:0030488	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6	28531330
NSUN6	GO:0005737	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6	26160102

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RNA A-to-I events for NSUN6

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000241058.2

RNA A-to-I editing events in Cancer.

CAediting_733757(18546765, -), CAediting_733758(18553085, -), CAediting_733759(18563389, -), CAediting_733760(18563439, -), CAediting_733761(18563934, -), CAediting_733762(18564443, -), CAediting_733763(18578354, -), CAediting_733764(18578371, -), CAediting_733765(18578372, -), CAediting_733766(18581714, -), CAediting_733767(18581782, -), CAediting_733768(18594652, -), CAediting_733769(18594654, -), CAediting_733770(18603531, -), CAediting_733771(18603538, -), CAediting_733772(18603567, -), CAediting_733773(18603582, -), CAediting_733774(18603608, -), CAediting_733775(18603634, -), CAediting_733776(18603680, -), CAediting_733777(18603772, -), CAediting_733778(18604138, -), CAediting_733779(18604738, -), CAediting_733780(18604762, -), CAediting_733781(18604764, -), CAediting_733782(18604774, -), CAediting_733783(18604777, -), CAediting_733784(18604778, -), CAediting_733785(18604803, -), CAediting_733786(18604804, -), CAediting_733787(18610999, -), CAediting_733788(18611001, -), CAediting_733789(18612198, -), CAediting_733790(18612201, -), CAediting_733791(18612327, -), CAediting_733792(18612359, -), CAediting_733793(18617280, -), CAediting_733794(18636863, -), CAediting_733795(18641434, -), CAediting_733796(18641463, -), CAediting_733797(18641490, -), CAediting_733798(18641597, -), CAediting_733799(18641637, -), CAediting_733800(18641858, -), CAediting_733801(18642062, -), CAediting_733802(18642063, -), CAediting_733803(18646663, -), CAediting_733804(18646719, -), CAediting_733805(18646730, -), CAediting_733806(18646731, -), CAediting_733807(18646748, -), CAediting_733808(18646827, -), CAediting_733809(18647767, -), CAediting_733810(18647801, -), CAediting_733811(18647824, -), CAediting_733812(18647831, -), CAediting_733813(18647832, -), CAediting_733814(18647889, -), CAediting_733815(18647892, -), CAediting_733816(18647900, -), CAediting_733817(18647904, -), CAediting_733818(18647918, -), CAediting_733819(18647932, -), CAediting_733820(18647934, -), CAediting_733821(18647943, -), CAediting_733822(18647985, -), CAediting_733823(18647988, -), CAediting_733824(18647995, -), CAediting_733825(18648012, -), CAediting_733826(18648034, -), CAediting_733827(18652650, -), CAediting_733828(18652653, -), CAediting_733829(18652656, -), CAediting_733830(18652657, -), CAediting_733831(18652666, -), CAediting_733832(18652668, -), CAediting_733833(18652671, -), CAediting_733834(18652675, -), CAediting_733835(18652676, -), CAediting_733836(18652688, -), CAediting_733837(18652697, -), CAediting_733838(18652698, -), CAediting_733839(18652729, -), CAediting_733840(18652730, -), CAediting_733841(18652731, -), CAediting_733842(18652733, -), CAediting_733843(18652737, -), CAediting_733844(18652738, -), CAediting_733845(18652753, -), CAediting_733846(18652764, -), CAediting_733847(18652784, -), CAediting_733848(18652787, -), CAediting_733849(18652791, -), CAediting_733850(18652831, -), CAediting_733851(18652840, -), CAediting_733852(18652861, -), CAediting_733853(18652862, -), CAediting_733854(18653189, -), CAediting_733855(18653394, -), CAediting_733856(18653435, -), CAediting_733857(18653500, -), CAediting_733858(18653509, -), CAediting_733859(18653512, -), CAediting_733860(18653516, -), CAediting_733861(18653565, -), CAediting_733862(18653585, -), CAediting_733863(18653599, -), CAediting_733864(18653610, -), CAediting_733865(18653622, -), CAediting_733866(18653629, -), CAediting_733867(18653637, -), CAediting_733868(18653640, -), CAediting_733869(18653645, -), CAediting_733870(18653646, -), CAediting_733871(18654158, -), CAediting_733872(18654220, -), CAediting_733873(18654224, -), CAediting_733874(18654233, -), CAediting_733875(18654234, -), CAediting_733876(18654240, -), CAediting_733877(18654617, -), CAediting_733878(18654620, -), CAediting_733879(18654624, -), CAediting_733880(18654626, -), CAediting_733881(18654638, -), CAediting_733882(18654639, -), CAediting_733883(18654640, -), CAediting_733884(18654648, -), CAediting_733885(18654657, -), CAediting_733886(18654661, -), CAediting_733887(18654689, -), CAediting_733888(18654692, -), CAediting_733889(18654696, -), CAediting_733890(18654700, -), CAediting_733891(18654714, -), CAediting_733892(18654717, -), CAediting_733893(18654723, -), CAediting_733894(18654731, -), CAediting_733895(18654752, -), CAediting_733896(18654756, -), CAediting_733897(18654758, -), CAediting_733898(18654768, -), CAediting_733899(18654772, -), CAediting_733900(18654797, -), CAediting_733901(18654798, -), CAediting_733902(18654817, -), CAediting_733903(18654818, -), CAediting_733904(18654823, -), CAediting_733905(18654834, -), CAediting_733906(18654866, -), CAediting_733907(18654870, -), CAediting_733908(18656371, -), CAediting_733909(18656490, -), CAediting_733910(18656533, -), CAediting_733911(18656534, -), CAediting_733912(18656535, -), CAediting_733913(18656879, -), CAediting_733914(18656894, -), CAediting_733915(18656919, -), CAediting_733916(18656937, -), CAediting_733917(18656954, -), CAediting_733918(18656955, -), CAediting_733919(18656965, -), CAediting_733920(18656991, -), CAediting_733921(18656995, -), CAediting_733922(18656996, -), CAediting_733923(18656997, -), CAediting_733924(18657000, -), CAediting_733925(18657003, -), CAediting_733926(18657004, -), CAediting_733927(18657005, -), CAediting_733928(18657040, -), CAediting_733929(18657046, -), CAediting_733930(18657079, -),

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RNA editing positional annotations for NSUN6 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_733757	chr10_18546765_-	ncRNA_intronic
CAediting_733758	chr10_18553085_-	intronic
CAediting_733759	chr10_18563389_-	intronic
CAediting_733760	chr10_18563439_-	intronic
CAediting_733761	chr10_18563934_-	intronic
CAediting_733762	chr10_18564443_-	intronic
CAediting_733763	chr10_18578354_-	intronic
CAediting_733764	chr10_18578371_-	intronic
CAediting_733765	chr10_18578372_-	intronic
CAediting_733766	chr10_18581714_-	intronic
CAediting_733767	chr10_18581782_-	intronic
CAediting_733768	chr10_18594652_-	intronic
CAediting_733769	chr10_18594654_-	intronic
CAediting_733770	chr10_18603531_-	intronic
CAediting_733771	chr10_18603538_-	intronic
CAediting_733772	chr10_18603567_-	intronic
CAediting_733773	chr10_18603582_-	intronic
CAediting_733774	chr10_18603608_-	intronic
CAediting_733775	chr10_18603634_-	intronic
CAediting_733776	chr10_18603680_-	intronic
CAediting_733777	chr10_18603772_-	intronic
CAediting_733778	chr10_18604138_-	intronic
CAediting_733779	chr10_18604738_-	intronic
CAediting_733780	chr10_18604762_-	intronic
CAediting_733781	chr10_18604764_-	intronic
CAediting_733782	chr10_18604774_-	intronic
CAediting_733783	chr10_18604777_-	intronic
CAediting_733784	chr10_18604778_-	intronic
CAediting_733785	chr10_18604803_-	intronic
CAediting_733786	chr10_18604804_-	intronic
CAediting_733787	chr10_18610999_-	intronic
CAediting_733788	chr10_18611001_-	intronic
CAediting_733789	chr10_18612198_-	intronic
CAediting_733790	chr10_18612201_-	intronic
CAediting_733791	chr10_18612327_-	intronic
CAediting_733792	chr10_18612359_-	intronic
CAediting_733793	chr10_18617280_-	intronic
CAediting_733794	chr10_18636863_-	intronic
CAediting_733795	chr10_18641434_-	intronic
CAediting_733796	chr10_18641463_-	intronic
CAediting_733797	chr10_18641490_-	intronic
CAediting_733798	chr10_18641597_-	intronic
CAediting_733799	chr10_18641637_-	intronic
CAediting_733800	chr10_18641858_-	intronic
CAediting_733801	chr10_18642062_-	intronic
CAediting_733802	chr10_18642063_-	intronic
CAediting_733803	chr10_18646663_-	intronic
CAediting_733804	chr10_18646719_-	intronic
CAediting_733805	chr10_18646730_-	intronic
CAediting_733806	chr10_18646731_-	intronic
CAediting_733807	chr10_18646748_-	intronic
CAediting_733808	chr10_18646827_-	intronic
CAediting_733809	chr10_18647767_-	intronic
CAediting_733810	chr10_18647801_-	intronic
CAediting_733811	chr10_18647824_-	intronic
CAediting_733812	chr10_18647831_-	intronic
CAediting_733813	chr10_18647832_-	intronic
CAediting_733814	chr10_18647889_-	intronic
CAediting_733815	chr10_18647892_-	intronic
CAediting_733816	chr10_18647900_-	intronic
CAediting_733817	chr10_18647904_-	intronic
CAediting_733818	chr10_18647918_-	intronic
CAediting_733819	chr10_18647932_-	intronic
CAediting_733820	chr10_18647934_-	intronic
CAediting_733821	chr10_18647943_-	intronic
CAediting_733822	chr10_18647985_-	intronic
CAediting_733823	chr10_18647988_-	intronic
CAediting_733824	chr10_18647995_-	intronic
CAediting_733825	chr10_18648012_-	intronic
CAediting_733826	chr10_18648034_-	intronic
CAediting_733827	chr10_18652650_-	ncRNA_intronic
CAediting_733828	chr10_18652653_-	ncRNA_intronic
CAediting_733829	chr10_18652656_-	ncRNA_intronic
CAediting_733830	chr10_18652657_-	ncRNA_intronic
CAediting_733831	chr10_18652666_-	ncRNA_intronic
CAediting_733832	chr10_18652668_-	ncRNA_intronic
CAediting_733833	chr10_18652671_-	ncRNA_intronic
CAediting_733834	chr10_18652675_-	ncRNA_intronic
CAediting_733835	chr10_18652676_-	ncRNA_intronic
CAediting_733836	chr10_18652688_-	ncRNA_intronic
CAediting_733837	chr10_18652697_-	ncRNA_intronic
CAediting_733838	chr10_18652698_-	ncRNA_intronic
CAediting_733839	chr10_18652729_-	ncRNA_intronic
CAediting_733840	chr10_18652730_-	ncRNA_intronic
CAediting_733841	chr10_18652731_-	ncRNA_intronic
CAediting_733842	chr10_18652733_-	ncRNA_intronic
CAediting_733843	chr10_18652737_-	ncRNA_intronic
CAediting_733844	chr10_18652738_-	ncRNA_intronic
CAediting_733845	chr10_18652753_-	ncRNA_intronic
CAediting_733846	chr10_18652764_-	ncRNA_intronic
CAediting_733847	chr10_18652784_-	ncRNA_intronic
CAediting_733848	chr10_18652787_-	ncRNA_intronic
CAediting_733849	chr10_18652791_-	ncRNA_intronic
CAediting_733850	chr10_18652831_-	ncRNA_intronic
CAediting_733851	chr10_18652840_-	ncRNA_intronic
CAediting_733852	chr10_18652861_-	ncRNA_intronic
CAediting_733853	chr10_18652862_-	ncRNA_intronic
CAediting_733854	chr10_18653189_-	ncRNA_intronic
CAediting_733855	chr10_18653394_-	ncRNA_intronic
CAediting_733856	chr10_18653435_-	ncRNA_intronic
CAediting_733857	chr10_18653500_-	ncRNA_intronic
CAediting_733858	chr10_18653509_-	ncRNA_intronic
CAediting_733859	chr10_18653512_-	ncRNA_intronic
CAediting_733860	chr10_18653516_-	ncRNA_intronic
CAediting_733861	chr10_18653565_-	ncRNA_intronic
CAediting_733862	chr10_18653585_-	ncRNA_intronic
CAediting_733863	chr10_18653599_-	ncRNA_intronic
CAediting_733864	chr10_18653610_-	ncRNA_intronic
CAediting_733865	chr10_18653622_-	ncRNA_intronic
CAediting_733866	chr10_18653629_-	ncRNA_intronic
CAediting_733867	chr10_18653637_-	ncRNA_intronic
CAediting_733868	chr10_18653640_-	ncRNA_intronic
CAediting_733869	chr10_18653645_-	ncRNA_intronic
CAediting_733870	chr10_18653646_-	ncRNA_intronic
CAediting_733871	chr10_18654158_-	ncRNA_intronic
CAediting_733872	chr10_18654220_-	ncRNA_intronic
CAediting_733873	chr10_18654224_-	ncRNA_intronic
CAediting_733874	chr10_18654233_-	ncRNA_intronic
CAediting_733875	chr10_18654234_-	ncRNA_intronic
CAediting_733876	chr10_18654240_-	ncRNA_intronic
CAediting_733877	chr10_18654617_-	ncRNA_exonic
CAediting_733878	chr10_18654620_-	ncRNA_exonic
CAediting_733879	chr10_18654624_-	ncRNA_exonic
CAediting_733880	chr10_18654626_-	ncRNA_exonic
CAediting_733881	chr10_18654638_-	ncRNA_exonic
CAediting_733882	chr10_18654639_-	ncRNA_exonic
CAediting_733883	chr10_18654640_-	ncRNA_exonic
CAediting_733884	chr10_18654648_-	ncRNA_exonic
CAediting_733885	chr10_18654657_-	ncRNA_exonic
CAediting_733886	chr10_18654661_-	ncRNA_exonic
CAediting_733887	chr10_18654689_-	ncRNA_exonic
CAediting_733888	chr10_18654692_-	ncRNA_exonic
CAediting_733889	chr10_18654696_-	ncRNA_exonic
CAediting_733890	chr10_18654700_-	ncRNA_exonic
CAediting_733891	chr10_18654714_-	ncRNA_exonic
CAediting_733892	chr10_18654717_-	ncRNA_exonic
CAediting_733893	chr10_18654723_-	ncRNA_exonic
CAediting_733894	chr10_18654731_-	ncRNA_exonic
CAediting_733895	chr10_18654752_-	ncRNA_exonic
CAediting_733896	chr10_18654756_-	ncRNA_exonic
CAediting_733897	chr10_18654758_-	ncRNA_exonic
CAediting_733898	chr10_18654768_-	ncRNA_exonic
CAediting_733899	chr10_18654772_-	ncRNA_exonic
CAediting_733900	chr10_18654797_-	ncRNA_exonic
CAediting_733901	chr10_18654798_-	ncRNA_exonic
CAediting_733902	chr10_18654817_-	ncRNA_exonic
CAediting_733903	chr10_18654818_-	ncRNA_exonic
CAediting_733904	chr10_18654823_-	ncRNA_exonic
CAediting_733905	chr10_18654834_-	ncRNA_exonic
CAediting_733906	chr10_18654866_-	ncRNA_exonic
CAediting_733907	chr10_18654870_-	ncRNA_exonic
CAediting_733908	chr10_18656371_-	ncRNA_intronic
CAediting_733909	chr10_18656490_-	ncRNA_intronic
CAediting_733910	chr10_18656533_-	ncRNA_intronic
CAediting_733911	chr10_18656534_-	ncRNA_intronic
CAediting_733912	chr10_18656535_-	ncRNA_intronic
CAediting_733913	chr10_18656879_-	ncRNA_intronic
CAediting_733914	chr10_18656894_-	ncRNA_intronic
CAediting_733915	chr10_18656919_-	ncRNA_intronic
CAediting_733916	chr10_18656937_-	ncRNA_intronic
CAediting_733917	chr10_18656954_-	ncRNA_intronic
CAediting_733918	chr10_18656955_-	ncRNA_intronic
CAediting_733919	chr10_18656965_-	ncRNA_intronic
CAediting_733920	chr10_18656991_-	ncRNA_intronic
CAediting_733921	chr10_18656995_-	ncRNA_intronic
CAediting_733922	chr10_18656996_-	ncRNA_intronic
CAediting_733923	chr10_18656997_-	ncRNA_intronic
CAediting_733924	chr10_18657000_-	ncRNA_intronic
CAediting_733925	chr10_18657003_-	ncRNA_intronic
CAediting_733926	chr10_18657004_-	ncRNA_intronic
CAediting_733927	chr10_18657005_-	ncRNA_intronic
CAediting_733928	chr10_18657040_-	ncRNA_intronic
CAediting_733929	chr10_18657046_-	ncRNA_intronic
CAediting_733930	chr10_18657079_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_733757	chr10_18546765_-	SINE	Alu	AluSx
CAediting_733758	chr10_18553085_-	Simple_repeat	Simple_repeat	(TTCCA)n
CAediting_733759	chr10_18563389_-	Simple_repeat	Simple_repeat	(GAATG)n
CAediting_733760	chr10_18563439_-	Simple_repeat	Simple_repeat	(GAATG)n
CAediting_733761	chr10_18563934_-	Simple_repeat	Simple_repeat	(TTCCA)n
CAediting_733762	chr10_18564443_-	Simple_repeat	Simple_repeat	(TTCCA)n
CAediting_733763	chr10_18578354_-	SINE	Alu	AluSx
CAediting_733764	chr10_18578371_-	SINE	Alu	AluSx
CAediting_733765	chr10_18578372_-	SINE	Alu	AluSx
CAediting_733766	chr10_18581714_-	SINE	Alu	AluSc
CAediting_733767	chr10_18581782_-	SINE	Alu	AluSc
CAediting_733768	chr10_18594652_-	SINE	Alu	AluSc
CAediting_733769	chr10_18594654_-	SINE	Alu	AluSc
CAediting_733770	chr10_18603531_-	SINE	Alu	AluSq2
CAediting_733771	chr10_18603538_-	SINE	Alu	AluSq2
CAediting_733772	chr10_18603567_-	SINE	Alu	AluSq2
CAediting_733773	chr10_18603582_-	SINE	Alu	AluSq2
CAediting_733774	chr10_18603608_-	SINE	Alu	AluSq2
CAediting_733775	chr10_18603634_-	SINE	Alu	AluSq2
CAediting_733776	chr10_18603680_-	SINE	Alu	AluSq2
CAediting_733777	chr10_18603772_-	SINE	Alu	AluSq2
CAediting_733778	chr10_18604138_-	SINE	Alu	AluSc
CAediting_733779	chr10_18604738_-	SINE	Alu	AluSx
CAediting_733780	chr10_18604762_-	SINE	Alu	AluSx
CAediting_733781	chr10_18604764_-	SINE	Alu	AluSx
CAediting_733782	chr10_18604774_-	SINE	Alu	AluSx
CAediting_733783	chr10_18604777_-	SINE	Alu	AluSx
CAediting_733784	chr10_18604778_-	SINE	Alu	AluSx
CAediting_733785	chr10_18604803_-	SINE	Alu	AluSx
CAediting_733786	chr10_18604804_-	SINE	Alu	AluSx
CAediting_733787	chr10_18610999_-	SINE	Alu	AluJr
CAediting_733788	chr10_18611001_-	SINE	Alu	AluJr
CAediting_733789	chr10_18612198_-	SINE	Alu	AluJr4
CAediting_733790	chr10_18612201_-	SINE	Alu	AluJr4
CAediting_733791	chr10_18612327_-	SINE	Alu	AluJr4
CAediting_733792	chr10_18612359_-	SINE	Alu	AluJr4
CAediting_733793	chr10_18617280_-	SINE	Alu	AluSx1
CAediting_733794	chr10_18636863_-	SINE	Alu	AluSx4
CAediting_733795	chr10_18641434_-	SINE	Alu	AluJb
CAediting_733796	chr10_18641463_-	SINE	Alu	AluJb
CAediting_733797	chr10_18641490_-	SINE	Alu	AluJb
CAediting_733798	chr10_18641597_-	SINE	Alu	AluJb
CAediting_733799	chr10_18641637_-	SINE	Alu	AluJb
CAediting_733800	chr10_18641858_-	SINE	Alu	AluJr
CAediting_733801	chr10_18642062_-	SINE	Alu	AluJr
CAediting_733802	chr10_18642063_-	SINE	Alu	AluJr
CAediting_733803	chr10_18646663_-	SINE	Alu	AluSx4
CAediting_733804	chr10_18646719_-	SINE	Alu	AluSx4
CAediting_733805	chr10_18646730_-	SINE	Alu	AluSx4
CAediting_733806	chr10_18646731_-	SINE	Alu	AluSx4
CAediting_733807	chr10_18646748_-	SINE	Alu	AluSx4
CAediting_733808	chr10_18646827_-	SINE	Alu	AluSx4
CAediting_733809	chr10_18647767_-	SINE	Alu	AluSz6
CAediting_733810	chr10_18647801_-	SINE	Alu	AluSz6
CAediting_733811	chr10_18647824_-	SINE	Alu	AluSz6
CAediting_733812	chr10_18647831_-	SINE	Alu	AluSz6
CAediting_733813	chr10_18647832_-	SINE	Alu	AluSz6
CAediting_733814	chr10_18647889_-	SINE	Alu	AluSz6
CAediting_733815	chr10_18647892_-	SINE	Alu	AluSz6
CAediting_733816	chr10_18647900_-	SINE	Alu	AluSz6
CAediting_733817	chr10_18647904_-	SINE	Alu	AluSz6
CAediting_733818	chr10_18647918_-	SINE	Alu	AluSz6
CAediting_733819	chr10_18647932_-	SINE	Alu	AluSz6
CAediting_733820	chr10_18647934_-	SINE	Alu	AluSz6
CAediting_733821	chr10_18647943_-	SINE	Alu	AluSz6
CAediting_733822	chr10_18647985_-	SINE	Alu	AluSz6
CAediting_733823	chr10_18647988_-	SINE	Alu	AluSz6
CAediting_733824	chr10_18647995_-	SINE	Alu	AluSz6
CAediting_733825	chr10_18648012_-	SINE	Alu	AluSz6
CAediting_733826	chr10_18648034_-	SINE	Alu	AluSz6
CAediting_733827	chr10_18652650_-	SINE	Alu	AluSz
CAediting_733828	chr10_18652653_-	SINE	Alu	AluSz
CAediting_733829	chr10_18652656_-	SINE	Alu	AluSz
CAediting_733830	chr10_18652657_-	SINE	Alu	AluSz
CAediting_733831	chr10_18652666_-	SINE	Alu	AluSz
CAediting_733832	chr10_18652668_-	SINE	Alu	AluSz
CAediting_733833	chr10_18652671_-	SINE	Alu	AluSz
CAediting_733834	chr10_18652675_-	SINE	Alu	AluSz
CAediting_733835	chr10_18652676_-	SINE	Alu	AluSz
CAediting_733836	chr10_18652688_-	SINE	Alu	AluSz
CAediting_733837	chr10_18652697_-	SINE	Alu	AluSz
CAediting_733838	chr10_18652698_-	SINE	Alu	AluSz
CAediting_733839	chr10_18652729_-	SINE	Alu	AluSz
CAediting_733840	chr10_18652730_-	SINE	Alu	AluSz
CAediting_733841	chr10_18652731_-	SINE	Alu	AluSz
CAediting_733842	chr10_18652733_-	SINE	Alu	AluSz
CAediting_733843	chr10_18652737_-	SINE	Alu	AluSz
CAediting_733844	chr10_18652738_-	SINE	Alu	AluSz
CAediting_733845	chr10_18652753_-	SINE	Alu	AluSz
CAediting_733846	chr10_18652764_-	SINE	Alu	AluSz
CAediting_733847	chr10_18652784_-	SINE	Alu	AluSz
CAediting_733848	chr10_18652787_-	SINE	Alu	AluSz
CAediting_733849	chr10_18652791_-	SINE	Alu	AluSz
CAediting_733850	chr10_18652831_-	SINE	Alu	AluSz
CAediting_733851	chr10_18652840_-	SINE	Alu	AluSz
CAediting_733852	chr10_18652861_-	SINE	MIR	MIR
CAediting_733853	chr10_18652862_-	SINE	MIR	MIR
CAediting_733854	chr10_18653189_-	LINE	L2	L2c
CAediting_733855	chr10_18653394_-	SINE	Alu	AluSx1
CAediting_733856	chr10_18653435_-	SINE	Alu	AluSx1
CAediting_733857	chr10_18653500_-	SINE	Alu	AluSx1
CAediting_733858	chr10_18653509_-	SINE	Alu	AluSx1
CAediting_733859	chr10_18653512_-	SINE	Alu	AluSx1
CAediting_733860	chr10_18653516_-	SINE	Alu	AluSx1
CAediting_733861	chr10_18653565_-	SINE	Alu	AluSx1
CAediting_733862	chr10_18653585_-	SINE	Alu	AluSx1
CAediting_733863	chr10_18653599_-	SINE	Alu	AluSx1
CAediting_733864	chr10_18653610_-	SINE	Alu	AluSx1
CAediting_733865	chr10_18653622_-	SINE	Alu	AluSx1
CAediting_733866	chr10_18653629_-	SINE	Alu	AluSx1
CAediting_733867	chr10_18653637_-	SINE	Alu	AluSx1
CAediting_733868	chr10_18653640_-	SINE	Alu	AluSx1
CAediting_733869	chr10_18653645_-	SINE	Alu	AluSx1
CAediting_733870	chr10_18653646_-	SINE	Alu	AluSx1
CAediting_733871	chr10_18654158_-	SINE	Alu	AluSx1
CAediting_733872	chr10_18654220_-	SINE	Alu	AluSx1
CAediting_733873	chr10_18654224_-	SINE	Alu	AluSx1
CAediting_733874	chr10_18654233_-	SINE	Alu	AluSx1
CAediting_733875	chr10_18654234_-	SINE	Alu	AluSx1
CAediting_733876	chr10_18654240_-	SINE	Alu	AluSx1
CAediting_733877	chr10_18654617_-	SINE	Alu	AluSx4
CAediting_733878	chr10_18654620_-	SINE	Alu	AluSx4
CAediting_733879	chr10_18654624_-	SINE	Alu	AluSx4
CAediting_733880	chr10_18654626_-	SINE	Alu	AluSx4
CAediting_733881	chr10_18654638_-	SINE	Alu	AluSx4
CAediting_733882	chr10_18654639_-	SINE	Alu	AluSx4
CAediting_733883	chr10_18654640_-	SINE	Alu	AluSx4
CAediting_733884	chr10_18654648_-	SINE	Alu	AluSx4
CAediting_733885	chr10_18654657_-	SINE	Alu	AluSx4
CAediting_733886	chr10_18654661_-	SINE	Alu	AluSx4
CAediting_733887	chr10_18654689_-	SINE	Alu	AluSx4
CAediting_733888	chr10_18654692_-	SINE	Alu	AluSx4
CAediting_733889	chr10_18654696_-	SINE	Alu	AluSx4
CAediting_733890	chr10_18654700_-	SINE	Alu	AluSx4
CAediting_733891	chr10_18654714_-	SINE	Alu	AluSx4
CAediting_733892	chr10_18654717_-	SINE	Alu	AluSx4
CAediting_733893	chr10_18654723_-	SINE	Alu	AluSx4
CAediting_733894	chr10_18654731_-	SINE	Alu	AluSx4
CAediting_733895	chr10_18654752_-	SINE	Alu	AluSx4
CAediting_733896	chr10_18654756_-	SINE	Alu	AluSx4
CAediting_733897	chr10_18654758_-	SINE	Alu	AluSx4
CAediting_733898	chr10_18654768_-	SINE	Alu	AluSx4
CAediting_733899	chr10_18654772_-	SINE	Alu	AluSx4
CAediting_733900	chr10_18654797_-	SINE	Alu	AluSx4
CAediting_733901	chr10_18654798_-	SINE	Alu	AluSx4
CAediting_733902	chr10_18654817_-	SINE	Alu	AluSx4
CAediting_733903	chr10_18654818_-	SINE	Alu	AluSx4
CAediting_733904	chr10_18654823_-	SINE	Alu	AluSx4
CAediting_733905	chr10_18654834_-	SINE	Alu	AluSx4
CAediting_733906	chr10_18654866_-	SINE	Alu	AluSx4
CAediting_733907	chr10_18654870_-	SINE	Alu	AluSx4
CAediting_733908	chr10_18656371_-	SINE	Alu	AluSg
CAediting_733909	chr10_18656490_-	SINE	Alu	AluSg
CAediting_733910	chr10_18656533_-	SINE	Alu	AluSg
CAediting_733911	chr10_18656534_-	SINE	Alu	AluSg
CAediting_733912	chr10_18656535_-	SINE	Alu	AluSg
CAediting_733913	chr10_18656879_-	SINE	Alu	AluJb
CAediting_733914	chr10_18656894_-	SINE	Alu	AluJb
CAediting_733915	chr10_18656919_-	SINE	Alu	AluJb
CAediting_733916	chr10_18656937_-	SINE	Alu	AluJb
CAediting_733917	chr10_18656954_-	SINE	Alu	AluJb
CAediting_733918	chr10_18656955_-	SINE	Alu	AluJb
CAediting_733919	chr10_18656965_-	SINE	Alu	AluJb
CAediting_733920	chr10_18656991_-	SINE	Alu	AluJb
CAediting_733921	chr10_18656995_-	SINE	Alu	AluJb
CAediting_733922	chr10_18656996_-	SINE	Alu	AluJb
CAediting_733923	chr10_18656997_-	SINE	Alu	AluJb
CAediting_733924	chr10_18657000_-	SINE	Alu	AluJb
CAediting_733925	chr10_18657003_-	SINE	Alu	AluJb
CAediting_733926	chr10_18657004_-	SINE	Alu	AluJb
CAediting_733927	chr10_18657005_-	SINE	Alu	AluJb
CAediting_733928	chr10_18657040_-	SINE	Alu	AluJb
CAediting_733929	chr10_18657046_-	SINE	Alu	AluJb
CAediting_733930	chr10_18657079_-	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for NSUN6

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000241058.2.NSUN6.

Correlation between RNA A-to-I editing and PSI for ENSG00000241058.2.NSUN6.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NSUN6

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LAML.CAediting_733855.ENSG00000241058.NSUN6.png
Soverview

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Protein coding region RNA A-to-I editings for NSUN6

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NSUN6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_733856	chr10_18653435_-	ENSG00000241058.2	ENST00000607346	hsa-miR-3085-5p	18653429	18653436	8mer-1a	18653429	18653452	153.00	-19.29
CAediting_733906	chr10_18654866_-	ENSG00000241058.2	ENST00000607346	hsa-miR-340-3p	18654864	18654871	8mer-1a	18654864	18654885	148.00	-18.22
CAediting_733906	chr10_18654866_-	ENSG00000241058.2	ENST00000607346	hsa-miR-6827-3p	18654864	18654871	8mer-1a	18654864	18654884	140.00	-14.67
CAediting_733907	chr10_18654870_-	ENSG00000241058.2	ENST00000607346	hsa-miR-4433b-5p	18654866	18654872	7mer-m8	18654865	18654885	140.00	-10.81

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_733907	chr10_18654870_-	ENSG00000241058.2	ENST00000607346	hsa-miR-371b-5p	18654868	18654875	8mer-1a	18654868	18654889	154	-11.76
CAediting_733907	chr10_18654870_-	ENSG00000241058.2	ENST00000607346	hsa-miR-373-5p	18654868	18654875	8mer-1a	18654868	18654889	140	-8.35
CAediting_733906	chr10_18654866_-	ENSG00000241058.2	ENST00000607346	hsa-miR-4522	18654861	18654867	7mer-m8	18654860	18654880	148	-12.83
CAediting_733907	chr10_18654870_-	ENSG00000241058.2	ENST00000607346	hsa-miR-514b-5p	18654868	18654873	6mer	18654867	18654888	142	-10.4
CAediting_733907	chr10_18654870_-	ENSG00000241058.2	ENST00000607346	hsa-miR-616-5p	18654868	18654875	8mer-1a	18654868	18654889	140	-5.71
CAediting_733906	chr10_18654866_-	ENSG00000241058.2	ENST00000607346	hsa-miR-6888-3p	18654864	18654870	7mer-m8	18654863	18654883	151	-14.42
CAediting_733855	chr10_18653394_-	ENSG00000241058.2	ENST00000607346	hsa-miR-3198	18653394	18653400	7mer-m8	18653393	18653414	140	-15.55
CAediting_733855	chr10_18653394_-	ENSG00000241058.2	ENST00000607346	hsa-miR-3198	18653394	18653400	7mer-m8	18653393	18653414	140	-15.55
CAediting_733855	chr10_18653394_-	ENSG00000241058.2	ENST00000607346	hsa-miR-4309	18653394	18653400	7mer-m8	18653393	18653408	149	-15.31
CAediting_733855	chr10_18653394_-	ENSG00000241058.2	ENST00000607346	hsa-miR-4534	18653392	18653398	7mer-m8	18653391	18653407	140	-14.41
CAediting_733855	chr10_18653394_-	ENSG00000241058.2	ENST00000607346	hsa-miR-6514-5p	18653393	18653399	7mer-m8	18653392	18653413	147	-14.93
CAediting_733855	chr10_18653394_-	ENSG00000241058.2	ENST00000607346	hsa-miR-8082	18653392	18653398	7mer-m8	18653391	18653413	141	-16.39

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000241058.2	ENST00000607346	hsa-miR-200b-3p	18653304	18653310	7mer-m8	18653303	18653324	140	-10.51
CAediting_573001	chr7_92204086_-	ENSG00000241058.2	ENST00000607346	hsa-miR-1285-5p	18653398	18653403	6mer	18653397	18653417	147	-27.61

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NSUN6

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for NSUN6

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for NSUN6

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for NSUN6

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for NSUN6

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NSUN6

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
NSUN6	C0006142	Malignant neoplasm of breast	1	CTD_human
NSUN6	C0027627	Neoplasm Metastasis	1	CTD_human
NSUN6	C0678222	Breast Carcinoma	1	CTD_human
NSUN6	C1257931	Mammary Neoplasms, Human	1	CTD_human
NSUN6	C1458155	Mammary Neoplasms	1	CTD_human
NSUN6	C4704874	Mammary Carcinoma, Human	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene