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Editing gene: WAC-AS1 (CAeditome ID:220906)

Gene summary for WAC-AS1

Gene summary

Gene information	Gene symbol	WAC-AS1
	Gene ID	220906
	Gene name	WAC antisense RNA 1 (head to head)
	Synonyms	-
	Cytomap	10p12.1
	Type of gene	ncRNA
	Description	-
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for WAC-AS1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000254635.4

RNA A-to-I editing events in Cancer.

CAediting_740503(28522989, -), CAediting_740504(28523015, -), CAediting_740505(28523033, -), CAediting_740506(28523043, -), CAediting_740507(28523046, -), CAediting_740508(28523048, -), CAediting_740509(28523086, -), CAediting_740510(28523092, -), CAediting_740511(28523096, -), CAediting_740512(28523105, -), CAediting_740513(28523113, -), CAediting_740514(28523118, -), CAediting_740515(28523148, -), CAediting_740516(28523151, -), CAediting_740517(28523156, -), CAediting_740518(28523158, -), CAediting_740519(28523159, -), CAediting_740520(28523160, -), CAediting_740521(28523169, -), CAediting_740522(28523174, -), CAediting_740523(28523185, -), CAediting_740524(28523194, -), CAediting_740525(28523199, -), CAediting_740526(28523205, -), CAediting_740527(28523213, -), CAediting_740528(28523218, -), CAediting_740529(28523223, -), CAediting_740530(28523231, -), CAediting_740531(28523245, -), CAediting_740532(28523253, -), CAediting_740533(28523254, -), CAediting_740534(28523272, -), CAediting_740535(28523618, -), CAediting_740536(28523620, -), CAediting_740537(28523639, -), CAediting_740538(28523654, -), CAediting_740539(28523667, -), CAediting_740540(28523674, -), CAediting_740541(28523689, -), CAediting_740542(28523690, -), CAediting_740543(28523693, -), CAediting_740544(28523697, -), CAediting_740545(28523698, -), CAediting_740546(28523705, -), CAediting_740547(28523710, -), CAediting_740548(28523714, -), CAediting_740549(28523730, -), CAediting_740550(28523746, -), CAediting_740551(28523750, -), CAediting_740552(28523751, -), CAediting_740553(28525094, -), CAediting_740554(28525103, -), CAediting_740555(28525106, -), CAediting_740556(28525115, -), CAediting_740557(28525116, -), CAediting_740558(28525125, -), CAediting_740559(28525130, -), CAediting_740560(28525138, -), CAediting_740561(28525143, -), CAediting_740562(28525156, -), CAediting_740563(28525168, -), CAediting_740564(28525190, -), CAediting_740565(28525197, -), CAediting_740566(28525211, -), CAediting_740567(28525212, -), CAediting_740568(28525215, -), CAediting_740569(28525222, -), CAediting_740570(28525225, -), CAediting_740571(28525232, -), CAediting_740572(28525236, -), CAediting_740573(28525248, -), CAediting_740574(28525251, -), CAediting_740575(28525260, -), CAediting_740576(28525278, -), CAediting_740577(28525297, -), CAediting_740578(28525301, -), CAediting_740579(28525303, -), CAediting_740580(28525313, -), CAediting_740581(28525314, -), CAediting_740582(28525322, -), CAediting_740583(28525327, -), CAediting_740584(28525334, -), CAediting_740585(28525353, -), CAediting_740586(28525357, -), CAediting_740587(28525359, -), CAediting_740588(28525556, -), CAediting_740589(28525584, -), CAediting_740590(28525592, -), CAediting_740591(28525594, -), CAediting_740592(28525599, -), CAediting_740593(28525610, -), CAediting_740594(28525617, -), CAediting_740595(28525623, -), CAediting_740596(28525624, -), CAediting_740597(28525632, -), CAediting_740598(28525638, -), CAediting_740599(28525642, -), CAediting_740600(28525648, -), CAediting_740601(28525659, -), CAediting_740602(28525660, -), CAediting_740603(28525666, -), CAediting_740604(28525686, -), CAediting_740605(28525689, -), CAediting_740606(28525690, -), CAediting_740607(28525691, -), CAediting_740608(28525705, -), CAediting_740609(28525716, -), CAediting_740610(28525724, -), CAediting_740611(28525726, -), CAediting_740612(28525729, -), CAediting_740613(28525734, -), CAediting_740614(28525735, -), CAediting_740615(28525742, -), CAediting_740616(28525748, -), CAediting_740617(28525751, -), CAediting_740618(28525756, -), CAediting_740619(28525765, -), CAediting_740620(28525784, -), CAediting_740621(28525793, -), CAediting_740622(28525797, -), CAediting_740623(28528222, -), CAediting_740624(28529299, -), CAediting_740625(28529311, -), CAediting_740626(28529312, -), CAediting_740627(28529321, -), CAediting_740628(28529388, -), CAediting_740629(28529432, -), CAediting_740630(28530615, -), CAediting_740631(28530617, -), CAediting_740632(28530618, -), CAediting_740633(28530622, -), CAediting_740634(28530652, -), CAediting_740635(28530655, -), CAediting_740636(28530661, -), CAediting_740637(28530669, -), CAediting_740638(28530678, -), CAediting_740639(28530682, -), CAediting_740640(28530687, -), CAediting_740641(28530688, -), CAediting_740642(28530710, -), CAediting_740643(28530714, -), CAediting_740644(28530738, -), CAediting_740645(28530768, -), CAediting_740646(28530802, -), CAediting_740647(28530823, -), CAediting_740648(28530840, -), CAediting_740649(28531006, -), CAediting_740650(28531911, -), CAediting_740651(28531925, -), CAediting_740652(28531927, -), CAediting_740653(28531953, -), CAediting_740654(28531982, -), CAediting_740655(28531998, -), CAediting_740656(28532053, -), CAediting_740657(28532063, -), CAediting_740658(28532075, -), CAediting_740659(28532080, -), CAediting_740660(28532124, -), CAediting_740661(28532127, -), CAediting_740662(28532132, -), CAediting_740663(28532168, -),

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RNA editing positional annotations for WAC-AS1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_740503	chr10_28522989_-	ncRNA_exonic
CAediting_740504	chr10_28523015_-	ncRNA_exonic
CAediting_740505	chr10_28523033_-	ncRNA_exonic
CAediting_740506	chr10_28523043_-	ncRNA_exonic
CAediting_740507	chr10_28523046_-	ncRNA_exonic
CAediting_740508	chr10_28523048_-	ncRNA_exonic
CAediting_740509	chr10_28523086_-	ncRNA_exonic
CAediting_740510	chr10_28523092_-	ncRNA_exonic
CAediting_740511	chr10_28523096_-	ncRNA_exonic
CAediting_740512	chr10_28523105_-	ncRNA_exonic
CAediting_740513	chr10_28523113_-	ncRNA_exonic
CAediting_740514	chr10_28523118_-	ncRNA_exonic
CAediting_740515	chr10_28523148_-	ncRNA_exonic
CAediting_740516	chr10_28523151_-	ncRNA_exonic
CAediting_740517	chr10_28523156_-	ncRNA_exonic
CAediting_740518	chr10_28523158_-	ncRNA_exonic
CAediting_740519	chr10_28523159_-	ncRNA_exonic
CAediting_740520	chr10_28523160_-	ncRNA_exonic
CAediting_740521	chr10_28523169_-	ncRNA_exonic
CAediting_740522	chr10_28523174_-	ncRNA_exonic
CAediting_740523	chr10_28523185_-	ncRNA_exonic
CAediting_740524	chr10_28523194_-	ncRNA_exonic
CAediting_740525	chr10_28523199_-	ncRNA_exonic
CAediting_740526	chr10_28523205_-	ncRNA_exonic
CAediting_740527	chr10_28523213_-	ncRNA_exonic
CAediting_740528	chr10_28523218_-	ncRNA_exonic
CAediting_740529	chr10_28523223_-	ncRNA_exonic
CAediting_740530	chr10_28523231_-	ncRNA_exonic
CAediting_740531	chr10_28523245_-	ncRNA_exonic
CAediting_740532	chr10_28523253_-	ncRNA_exonic
CAediting_740533	chr10_28523254_-	ncRNA_exonic
CAediting_740534	chr10_28523272_-	ncRNA_exonic
CAediting_740535	chr10_28523618_-	ncRNA_exonic
CAediting_740536	chr10_28523620_-	ncRNA_exonic
CAediting_740537	chr10_28523639_-	ncRNA_exonic
CAediting_740538	chr10_28523654_-	ncRNA_exonic
CAediting_740539	chr10_28523667_-	ncRNA_exonic
CAediting_740540	chr10_28523674_-	ncRNA_exonic
CAediting_740541	chr10_28523689_-	ncRNA_exonic
CAediting_740542	chr10_28523690_-	ncRNA_exonic
CAediting_740543	chr10_28523693_-	ncRNA_exonic
CAediting_740544	chr10_28523697_-	ncRNA_exonic
CAediting_740545	chr10_28523698_-	ncRNA_exonic
CAediting_740546	chr10_28523705_-	ncRNA_exonic
CAediting_740547	chr10_28523710_-	ncRNA_exonic
CAediting_740548	chr10_28523714_-	ncRNA_exonic
CAediting_740549	chr10_28523730_-	ncRNA_exonic
CAediting_740550	chr10_28523746_-	ncRNA_exonic
CAediting_740551	chr10_28523750_-	ncRNA_exonic
CAediting_740552	chr10_28523751_-	ncRNA_exonic
CAediting_740553	chr10_28525094_-	ncRNA_intronic
CAediting_740554	chr10_28525103_-	ncRNA_intronic
CAediting_740555	chr10_28525106_-	ncRNA_intronic
CAediting_740556	chr10_28525115_-	ncRNA_intronic
CAediting_740557	chr10_28525116_-	ncRNA_intronic
CAediting_740558	chr10_28525125_-	ncRNA_intronic
CAediting_740559	chr10_28525130_-	ncRNA_intronic
CAediting_740560	chr10_28525138_-	ncRNA_intronic
CAediting_740561	chr10_28525143_-	ncRNA_intronic
CAediting_740562	chr10_28525156_-	ncRNA_intronic
CAediting_740563	chr10_28525168_-	ncRNA_intronic
CAediting_740564	chr10_28525190_-	ncRNA_intronic
CAediting_740565	chr10_28525197_-	ncRNA_intronic
CAediting_740566	chr10_28525211_-	ncRNA_intronic
CAediting_740567	chr10_28525212_-	ncRNA_intronic
CAediting_740568	chr10_28525215_-	ncRNA_intronic
CAediting_740569	chr10_28525222_-	ncRNA_intronic
CAediting_740570	chr10_28525225_-	ncRNA_intronic
CAediting_740571	chr10_28525232_-	ncRNA_intronic
CAediting_740572	chr10_28525236_-	ncRNA_intronic
CAediting_740573	chr10_28525248_-	ncRNA_intronic
CAediting_740574	chr10_28525251_-	ncRNA_intronic
CAediting_740575	chr10_28525260_-	ncRNA_intronic
CAediting_740576	chr10_28525278_-	ncRNA_intronic
CAediting_740577	chr10_28525297_-	ncRNA_intronic
CAediting_740578	chr10_28525301_-	ncRNA_intronic
CAediting_740579	chr10_28525303_-	ncRNA_intronic
CAediting_740580	chr10_28525313_-	ncRNA_intronic
CAediting_740581	chr10_28525314_-	ncRNA_intronic
CAediting_740582	chr10_28525322_-	ncRNA_intronic
CAediting_740583	chr10_28525327_-	ncRNA_intronic
CAediting_740584	chr10_28525334_-	ncRNA_intronic
CAediting_740585	chr10_28525353_-	ncRNA_intronic
CAediting_740586	chr10_28525357_-	ncRNA_intronic
CAediting_740587	chr10_28525359_-	ncRNA_intronic
CAediting_740588	chr10_28525556_-	ncRNA_intronic
CAediting_740589	chr10_28525584_-	ncRNA_intronic
CAediting_740590	chr10_28525592_-	ncRNA_intronic
CAediting_740591	chr10_28525594_-	ncRNA_intronic
CAediting_740592	chr10_28525599_-	ncRNA_intronic
CAediting_740593	chr10_28525610_-	ncRNA_intronic
CAediting_740594	chr10_28525617_-	ncRNA_intronic
CAediting_740595	chr10_28525623_-	ncRNA_intronic
CAediting_740596	chr10_28525624_-	ncRNA_intronic
CAediting_740597	chr10_28525632_-	ncRNA_intronic
CAediting_740598	chr10_28525638_-	ncRNA_intronic
CAediting_740599	chr10_28525642_-	ncRNA_intronic
CAediting_740600	chr10_28525648_-	ncRNA_intronic
CAediting_740601	chr10_28525659_-	ncRNA_intronic
CAediting_740602	chr10_28525660_-	ncRNA_intronic
CAediting_740603	chr10_28525666_-	ncRNA_intronic
CAediting_740604	chr10_28525686_-	ncRNA_intronic
CAediting_740605	chr10_28525689_-	ncRNA_intronic
CAediting_740606	chr10_28525690_-	ncRNA_intronic
CAediting_740607	chr10_28525691_-	ncRNA_intronic
CAediting_740608	chr10_28525705_-	ncRNA_intronic
CAediting_740609	chr10_28525716_-	ncRNA_intronic
CAediting_740610	chr10_28525724_-	ncRNA_intronic
CAediting_740611	chr10_28525726_-	ncRNA_intronic
CAediting_740612	chr10_28525729_-	ncRNA_intronic
CAediting_740613	chr10_28525734_-	ncRNA_intronic
CAediting_740614	chr10_28525735_-	ncRNA_intronic
CAediting_740615	chr10_28525742_-	ncRNA_intronic
CAediting_740616	chr10_28525748_-	ncRNA_intronic
CAediting_740617	chr10_28525751_-	ncRNA_intronic
CAediting_740618	chr10_28525756_-	ncRNA_intronic
CAediting_740619	chr10_28525765_-	ncRNA_intronic
CAediting_740620	chr10_28525784_-	ncRNA_intronic
CAediting_740621	chr10_28525793_-	ncRNA_intronic
CAediting_740622	chr10_28525797_-	ncRNA_intronic
CAediting_740623	chr10_28528222_-	ncRNA_intronic
CAediting_740624	chr10_28529299_-	ncRNA_intronic
CAediting_740625	chr10_28529311_-	ncRNA_intronic
CAediting_740626	chr10_28529312_-	ncRNA_intronic
CAediting_740627	chr10_28529321_-	ncRNA_intronic
CAediting_740628	chr10_28529388_-	ncRNA_intronic
CAediting_740629	chr10_28529432_-	ncRNA_intronic
CAediting_740630	chr10_28530615_-	ncRNA_intronic
CAediting_740631	chr10_28530617_-	ncRNA_intronic
CAediting_740632	chr10_28530618_-	ncRNA_intronic
CAediting_740633	chr10_28530622_-	ncRNA_intronic
CAediting_740634	chr10_28530652_-	ncRNA_intronic
CAediting_740635	chr10_28530655_-	ncRNA_intronic
CAediting_740636	chr10_28530661_-	ncRNA_intronic
CAediting_740637	chr10_28530669_-	ncRNA_intronic
CAediting_740638	chr10_28530678_-	ncRNA_intronic
CAediting_740639	chr10_28530682_-	ncRNA_intronic
CAediting_740640	chr10_28530687_-	ncRNA_intronic
CAediting_740641	chr10_28530688_-	ncRNA_intronic
CAediting_740642	chr10_28530710_-	ncRNA_intronic
CAediting_740643	chr10_28530714_-	ncRNA_intronic
CAediting_740644	chr10_28530738_-	ncRNA_intronic
CAediting_740645	chr10_28530768_-	ncRNA_intronic
CAediting_740646	chr10_28530802_-	ncRNA_intronic
CAediting_740647	chr10_28530823_-	ncRNA_intronic
CAediting_740648	chr10_28530840_-	ncRNA_intronic
CAediting_740649	chr10_28531006_-	ncRNA_intronic
CAediting_740650	chr10_28531911_-	ncRNA_exonic
CAediting_740651	chr10_28531925_-	ncRNA_exonic
CAediting_740652	chr10_28531927_-	ncRNA_exonic
CAediting_740653	chr10_28531953_-	ncRNA_exonic
CAediting_740654	chr10_28531982_-	ncRNA_exonic
CAediting_740655	chr10_28531998_-	ncRNA_exonic
CAediting_740656	chr10_28532053_-	ncRNA_exonic
CAediting_740657	chr10_28532063_-	ncRNA_exonic
CAediting_740658	chr10_28532075_-	ncRNA_exonic
CAediting_740659	chr10_28532080_-	ncRNA_exonic
CAediting_740660	chr10_28532124_-	ncRNA_exonic
CAediting_740661	chr10_28532127_-	ncRNA_exonic
CAediting_740662	chr10_28532132_-	ncRNA_exonic
CAediting_740663	chr10_28532168_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_740503	chr10_28522989_-	SINE	Alu	AluSp
CAediting_740504	chr10_28523015_-	SINE	Alu	AluSp
CAediting_740505	chr10_28523033_-	SINE	Alu	AluSp
CAediting_740506	chr10_28523043_-	SINE	Alu	AluSp
CAediting_740507	chr10_28523046_-	SINE	Alu	AluSp
CAediting_740508	chr10_28523048_-	SINE	Alu	AluSp
CAediting_740509	chr10_28523086_-	SINE	Alu	AluSp
CAediting_740510	chr10_28523092_-	SINE	Alu	AluSp
CAediting_740511	chr10_28523096_-	SINE	Alu	AluSp
CAediting_740512	chr10_28523105_-	SINE	Alu	AluSp
CAediting_740513	chr10_28523113_-	SINE	Alu	AluSp
CAediting_740514	chr10_28523118_-	SINE	Alu	AluSp
CAediting_740515	chr10_28523148_-	SINE	Alu	AluSp
CAediting_740516	chr10_28523151_-	SINE	Alu	AluSp
CAediting_740517	chr10_28523156_-	SINE	Alu	AluSp
CAediting_740518	chr10_28523158_-	SINE	Alu	AluSp
CAediting_740519	chr10_28523159_-	SINE	Alu	AluSp
CAediting_740520	chr10_28523160_-	SINE	Alu	AluSp
CAediting_740521	chr10_28523169_-	SINE	Alu	AluSp
CAediting_740522	chr10_28523174_-	SINE	Alu	AluSp
CAediting_740523	chr10_28523185_-	SINE	Alu	AluSp
CAediting_740524	chr10_28523194_-	SINE	Alu	AluSp
CAediting_740525	chr10_28523199_-	SINE	Alu	AluSp
CAediting_740526	chr10_28523205_-	SINE	Alu	AluSp
CAediting_740527	chr10_28523213_-	SINE	Alu	AluSp
CAediting_740528	chr10_28523218_-	SINE	Alu	AluSp
CAediting_740529	chr10_28523223_-	SINE	Alu	AluSp
CAediting_740530	chr10_28523231_-	SINE	Alu	AluSp
CAediting_740531	chr10_28523245_-	SINE	Alu	AluSp
CAediting_740532	chr10_28523253_-	SINE	Alu	AluSp
CAediting_740533	chr10_28523254_-	SINE	Alu	AluSp
CAediting_740534	chr10_28523272_-	SINE	Alu	AluSp
CAediting_740535	chr10_28523618_-	SINE	Alu	AluSc
CAediting_740536	chr10_28523620_-	SINE	Alu	AluSc
CAediting_740537	chr10_28523639_-	SINE	Alu	AluSc
CAediting_740538	chr10_28523654_-	SINE	Alu	AluSc
CAediting_740539	chr10_28523667_-	SINE	Alu	AluSc
CAediting_740540	chr10_28523674_-	SINE	Alu	AluSc
CAediting_740541	chr10_28523689_-	SINE	Alu	AluSc
CAediting_740542	chr10_28523690_-	SINE	Alu	AluSc
CAediting_740543	chr10_28523693_-	SINE	Alu	AluSc
CAediting_740544	chr10_28523697_-	SINE	Alu	AluSc
CAediting_740545	chr10_28523698_-	SINE	Alu	AluSc
CAediting_740546	chr10_28523705_-	SINE	Alu	AluSc
CAediting_740547	chr10_28523710_-	SINE	Alu	AluSc
CAediting_740548	chr10_28523714_-	SINE	Alu	AluSc
CAediting_740549	chr10_28523730_-	SINE	Alu	AluSc
CAediting_740550	chr10_28523746_-	SINE	Alu	AluSc
CAediting_740551	chr10_28523750_-	SINE	Alu	AluSc
CAediting_740552	chr10_28523751_-	SINE	Alu	AluSc
CAediting_740553	chr10_28525094_-	SINE	Alu	AluSq
CAediting_740554	chr10_28525103_-	SINE	Alu	AluSq
CAediting_740555	chr10_28525106_-	SINE	Alu	AluSq
CAediting_740556	chr10_28525115_-	SINE	Alu	AluSq
CAediting_740557	chr10_28525116_-	SINE	Alu	AluSq
CAediting_740558	chr10_28525125_-	SINE	Alu	AluSq
CAediting_740559	chr10_28525130_-	SINE	Alu	AluSq
CAediting_740560	chr10_28525138_-	SINE	Alu	AluSq
CAediting_740561	chr10_28525143_-	SINE	Alu	AluSq
CAediting_740562	chr10_28525156_-	SINE	Alu	AluSq
CAediting_740563	chr10_28525168_-	SINE	Alu	AluSq
CAediting_740564	chr10_28525190_-	SINE	Alu	AluSq
CAediting_740565	chr10_28525197_-	SINE	Alu	AluSq
CAediting_740566	chr10_28525211_-	SINE	Alu	AluSq
CAediting_740567	chr10_28525212_-	SINE	Alu	AluSq
CAediting_740568	chr10_28525215_-	SINE	Alu	AluSq
CAediting_740569	chr10_28525222_-	SINE	Alu	AluSq
CAediting_740570	chr10_28525225_-	SINE	Alu	AluSq
CAediting_740571	chr10_28525232_-	SINE	Alu	AluSq
CAediting_740572	chr10_28525236_-	SINE	Alu	AluSq
CAediting_740573	chr10_28525248_-	SINE	Alu	AluSq
CAediting_740574	chr10_28525251_-	SINE	Alu	AluSq
CAediting_740575	chr10_28525260_-	SINE	Alu	AluSq
CAediting_740576	chr10_28525278_-	SINE	Alu	AluSq
CAediting_740577	chr10_28525297_-	SINE	Alu	AluSq
CAediting_740578	chr10_28525301_-	SINE	Alu	AluSq
CAediting_740579	chr10_28525303_-	SINE	Alu	AluSq
CAediting_740580	chr10_28525313_-	SINE	Alu	AluSq
CAediting_740581	chr10_28525314_-	SINE	Alu	AluSq
CAediting_740582	chr10_28525322_-	SINE	Alu	AluSq
CAediting_740583	chr10_28525327_-	SINE	Alu	AluSq
CAediting_740584	chr10_28525334_-	SINE	Alu	AluSq
CAediting_740585	chr10_28525353_-	SINE	Alu	AluSq
CAediting_740586	chr10_28525357_-	SINE	Alu	AluSq
CAediting_740587	chr10_28525359_-	SINE	Alu	AluSq
CAediting_740588	chr10_28525556_-	SINE	Alu	AluSx1
CAediting_740589	chr10_28525584_-	SINE	Alu	AluSx1
CAediting_740590	chr10_28525592_-	SINE	Alu	AluSx1
CAediting_740591	chr10_28525594_-	SINE	Alu	AluSx1
CAediting_740592	chr10_28525599_-	SINE	Alu	AluSx1
CAediting_740593	chr10_28525610_-	SINE	Alu	AluSx1
CAediting_740594	chr10_28525617_-	SINE	Alu	AluSx1
CAediting_740595	chr10_28525623_-	SINE	Alu	AluSx1
CAediting_740596	chr10_28525624_-	SINE	Alu	AluSx1
CAediting_740597	chr10_28525632_-	SINE	Alu	AluSx1
CAediting_740598	chr10_28525638_-	SINE	Alu	AluSx1
CAediting_740599	chr10_28525642_-	SINE	Alu	AluSx1
CAediting_740600	chr10_28525648_-	SINE	Alu	AluSx1
CAediting_740601	chr10_28525659_-	SINE	Alu	AluSx1
CAediting_740602	chr10_28525660_-	SINE	Alu	AluSx1
CAediting_740603	chr10_28525666_-	SINE	Alu	AluSx1
CAediting_740604	chr10_28525686_-	SINE	Alu	AluSx1
CAediting_740605	chr10_28525689_-	SINE	Alu	AluSx1
CAediting_740606	chr10_28525690_-	SINE	Alu	AluSx1
CAediting_740607	chr10_28525691_-	SINE	Alu	AluSx1
CAediting_740608	chr10_28525705_-	SINE	Alu	AluSx1
CAediting_740609	chr10_28525716_-	SINE	Alu	AluSx1
CAediting_740610	chr10_28525724_-	SINE	Alu	AluSx1
CAediting_740611	chr10_28525726_-	SINE	Alu	AluSx1
CAediting_740612	chr10_28525729_-	SINE	Alu	AluSx1
CAediting_740613	chr10_28525734_-	SINE	Alu	AluSx1
CAediting_740614	chr10_28525735_-	SINE	Alu	AluSx1
CAediting_740615	chr10_28525742_-	SINE	Alu	AluSx1
CAediting_740616	chr10_28525748_-	SINE	Alu	AluSx1
CAediting_740617	chr10_28525751_-	SINE	Alu	AluSx1
CAediting_740618	chr10_28525756_-	SINE	Alu	AluSx1
CAediting_740619	chr10_28525765_-	SINE	Alu	AluSx1
CAediting_740620	chr10_28525784_-	LINE	L1	L1M4
CAediting_740621	chr10_28525793_-	LINE	L1	L1M4
CAediting_740622	chr10_28525797_-	LINE	L1	L1M4
CAediting_740623	chr10_28528222_-	SINE	Alu	AluSc
CAediting_740624	chr10_28529299_-	SINE	Alu	AluSc
CAediting_740625	chr10_28529311_-	SINE	Alu	AluSc
CAediting_740626	chr10_28529312_-	SINE	Alu	AluSc
CAediting_740627	chr10_28529321_-	SINE	Alu	AluSc
CAediting_740628	chr10_28529388_-	SINE	Alu	AluSc
CAediting_740629	chr10_28529432_-	SINE	Alu	AluSc
CAediting_740630	chr10_28530615_-	SINE	Alu	AluSz
CAediting_740631	chr10_28530617_-	SINE	Alu	AluSz
CAediting_740632	chr10_28530618_-	SINE	Alu	AluSz
CAediting_740633	chr10_28530622_-	SINE	Alu	AluSz
CAediting_740634	chr10_28530652_-	SINE	Alu	AluSz
CAediting_740635	chr10_28530655_-	SINE	Alu	AluSz
CAediting_740636	chr10_28530661_-	SINE	Alu	AluSz
CAediting_740637	chr10_28530669_-	SINE	Alu	AluSz
CAediting_740638	chr10_28530678_-	SINE	Alu	AluSz
CAediting_740639	chr10_28530682_-	SINE	Alu	AluSz
CAediting_740640	chr10_28530687_-	SINE	Alu	AluSz
CAediting_740641	chr10_28530688_-	SINE	Alu	AluSz
CAediting_740642	chr10_28530710_-	SINE	Alu	AluSz
CAediting_740643	chr10_28530714_-	SINE	Alu	AluSz
CAediting_740644	chr10_28530738_-	SINE	Alu	AluSz
CAediting_740645	chr10_28530768_-	SINE	Alu	AluSz
CAediting_740646	chr10_28530802_-	SINE	Alu	AluSz
CAediting_740647	chr10_28530823_-	SINE	Alu	AluSz
CAediting_740648	chr10_28530840_-	SINE	Alu	AluSz
CAediting_740649	chr10_28531006_-	SINE	Alu	AluJr
CAediting_740650	chr10_28531911_-	SINE	Alu	AluJr
CAediting_740651	chr10_28531925_-	SINE	Alu	AluJr
CAediting_740652	chr10_28531927_-	SINE	Alu	AluJr
CAediting_740653	chr10_28531953_-	SINE	Alu	AluJr
CAediting_740654	chr10_28531982_-	SINE	Alu	AluJr
CAediting_740655	chr10_28531998_-	SINE	Alu	AluJr
CAediting_740656	chr10_28532053_-	SINE	Alu	AluJr
CAediting_740657	chr10_28532063_-	SINE	Alu	AluJr
CAediting_740658	chr10_28532075_-	SINE	Alu	AluJr
CAediting_740659	chr10_28532080_-	SINE	Alu	AluJr
CAediting_740660	chr10_28532124_-	SINE	Alu	AluJr
CAediting_740661	chr10_28532127_-	SINE	Alu	AluJr
CAediting_740662	chr10_28532132_-	SINE	Alu	AluJr
CAediting_740663	chr10_28532168_-	SINE	Alu	AluJr

Top

RNA A-to-I editing events in the alternative splicing sites for WAC-AS1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000254635.4.WAC-AS1.

Correlation between RNA A-to-I editing and PSI for ENSG00000254635.4.WAC-AS1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for WAC-AS1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

HNSC.CAediting_740533.ENSG00000254635.WAC-AS1.png
Soverview

LIHC.CAediting_740503.ENSG00000254635.WAC-AS1.png
Soverview

UCEC.CAediting_740604.ENSG00000254635.WAC-AS1.png
Soverview

Top

Protein coding region RNA A-to-I editings for WAC-AS1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for WAC-AS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_740503	chr10_28522989_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-3124-3p	28522984	28522991	8mer-1a	28522984	28523005	140	-10.05
CAediting_740506	chr10_28523043_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4634	28523038	28523045	8mer-1a	28523038	28523058	146	-22.72
CAediting_740508	chr10_28523048_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4267	28523048	28523054	7mer-m8	28523047	28523062	144	-20.86
CAediting_740508	chr10_28523048_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-7977	28523046	28523052	7mer-m8	28523045	28523063	158	-23.88
CAediting_740519	chr10_28523159_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-325	28523158	28523165	8mer-1a	28523158	28523180	144	-10.9
CAediting_740519	chr10_28523159_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-3675-3p	28523155	28523161	7mer-m8	28523154	28523175	140	-12.47
CAediting_740527	chr10_28523213_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4726-3p	28523212	28523218	7mer-m8	28523211	28523230	149	-27.37
CAediting_740532	chr10_28523253_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-8052	28523248	28523254	7mer-1a	28523248	28523266	148	-29.06
CAediting_740533	chr10_28523254_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-513a-5p	28523253	28523259	7mer-m8	28523252	28523269	152	-17.32
CAediting_740533	chr10_28523254_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-638	28523248	28523254	7mer-1a	28523248	28523272	155	-34.38
CAediting_740539	chr10_28523667_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-1281	28523667	28523673	7mer-m8	28523666	28523682	145	-17.85
CAediting_740541	chr10_28523689_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-1976	28523688	28523695	8mer-1a	28523688	28523709	152	-20.54
CAediting_740544	chr10_28523697_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-18a-3p	28523692	28523698	7mer-m8	28523691	28523713	152	-20.24
CAediting_740544	chr10_28523697_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-3157-3p	28523693	28523699	7mer-m8	28523692	28523711	157	-27.34
CAediting_740544	chr10_28523697_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-874-3p	28523693	28523698	6mer	28523692	28523716	142	-30.35
CAediting_740547	chr10_28523710_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-1207-3p	28523710	28523716	7mer-m8	28523709	28523727	145	-15.47
CAediting_740547	chr10_28523710_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-646	28523708	28523714	7mer-m8	28523707	28523725	145	-17.14
CAediting_740551	chr10_28523750_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-3121-5p	28523749	28523755	7mer-m8	28523748	28523767	148	-12.56
CAediting_740551	chr10_28523750_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6782-3p	28523748	28523754	7mer-m8	28523747	28523769	154	-16.2
CAediting_740504	chr10_28523015_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-367-5p	28523015	28523021	7mer-m8	28523014	28523035	143	-12.08
CAediting_740507	chr10_28523046_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6790-3p	28523043	28523049	7mer-1a	28523043	28523062	141	-20.11
CAediting_740509	chr10_28523086_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4431	28523083	28523089	7mer-m8	28523082	28523103	140	-17.94
CAediting_740511	chr10_28523096_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-18a-3p	28523091	28523096	6mer	28523090	28523110	142	-24.7
CAediting_740511	chr10_28523096_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-1913	28523091	28523097	7mer-m8	28523090	28523117	153	-29.4
CAediting_740511	chr10_28523096_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4758-3p	28523092	28523098	7mer-1a	28523092	28523115	140	-27.75
CAediting_740511	chr10_28523096_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6849-3p	28523096	28523102	7mer-m8	28523095	28523117	149	-17.49
CAediting_740514	chr10_28523118_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-140-3p	28523117	28523123	7mer-m8	28523116	28523136	163	-23.58
CAediting_740515	chr10_28523148_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-5189-3p	28523143	28523149	7mer-m8	28523142	28523162	142	-11.75
CAediting_740517	chr10_28523156_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-500a-3p	28523151	28523158	8mer-1a	28523151	28523173	149	-14.49
CAediting_740520	chr10_28523160_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-222-5p	28523158	28523165	8mer-1a	28523158	28523179	148	-10.84
CAediting_740520	chr10_28523160_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-936	28523159	28523166	8mer-1a	28523159	28523179	151	-17.45
CAediting_740522	chr10_28523174_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-942-5p	28523174	28523179	6mer	28523173	28523194	152	-17.51
CAediting_740525	chr10_28523199_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-10396a-3p	28523196	28523201	6mer	28523195	28523215	154	-34.91
CAediting_740525	chr10_28523199_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-10396b-3p	28523196	28523201	6mer	28523195	28523216	154	-34.91
CAediting_740526	chr10_28523205_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6793-3p	28523205	28523211	7mer-m8	28523204	28523223	149	-20.67
CAediting_740530	chr10_28523231_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6849-3p	28523231	28523237	7mer-m8	28523230	28523251	140	-17.43
CAediting_740534	chr10_28523272_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-1307-5p	28523272	28523278	7mer-m8	28523271	28523291	150	-23.53
CAediting_740535	chr10_28523618_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-1181	28523618	28523624	7mer-m8	28523617	28523636	144	-23.56
CAediting_740542	chr10_28523690_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4446-5p	28523687	28523693	7mer-m8	28523686	28523707	167	-25.59
CAediting_740542	chr10_28523690_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6752-3p	28523689	28523696	8mer-1a	28523689	28523708	141	-20.38
CAediting_740546	chr10_28523705_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6778-3p	28523700	28523706	7mer-m8	28523699	28523718	141	-15.45
CAediting_740550	chr10_28523746_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4690-3p	28523742	28523748	7mer-m8	28523741	28523760	144	-17
CAediting_740550	chr10_28523746_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-5685	28523742	28523748	7mer-m8	28523741	28523763	141	-21
CAediting_740552	chr10_28523751_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6794-3p	28523746	28523752	7mer-m8	28523745	28523766	149	-17.08
CAediting_740536	chr10_28523620_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4632-3p	28523618	28523625	8mer-1a	28523618	28523641	150	-24.07
CAediting_740538	chr10_28523654_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6075	28523650	28523656	7mer-m8	28523649	28523667	146	-18.63

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_740513	chr10_28523113_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-1207-3p	28523109	28523115	7mer-m8	28523108	28523124	141	-14.76
CAediting_740505	chr10_28523033_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-122-5p	28523028	28523034	7mer-1a	28523028	28523046	143	-24.98
CAediting_740505	chr10_28523033_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-130a-3p	28523031	28523037	7mer-m8	28523030	28523051	150	-12.01
CAediting_740505	chr10_28523033_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-130b-3p	28523031	28523037	7mer-m8	28523030	28523051	153	-15.31
CAediting_740526	chr10_28523205_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-150-5p	28523204	28523210	7mer-m8	28523203	28523224	150	-20.37
CAediting_740527	chr10_28523213_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-3150a-5p	28523209	28523214	6mer	28523208	28523230	147	-25.11
CAediting_740535	chr10_28523618_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-3194-3p	28523614	28523619	6mer	28523613	28523635	141	-28.82
CAediting_740505	chr10_28523033_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-3666	28523031	28523037	7mer-m8	28523030	28523051	149	-14.69
CAediting_740552	chr10_28523751_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-3680-3p	28523750	28523757	8mer-1a	28523750	28523772	152	-18.23
CAediting_740550	chr10_28523746_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4267	28523741	28523747	7mer-m8	28523740	28523755	143	-18.44
CAediting_740505	chr10_28523033_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4295	28523031	28523037	7mer-m8	28523030	28523047	150	-12.01
CAediting_740513	chr10_28523113_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-450b-3p	28523113	28523119	7mer-m8	28523112	28523132	154	-23.18
CAediting_740514	chr10_28523118_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-450b-3p	28523113	28523119	7mer-m8	28523112	28523132	154	-23.18
CAediting_740505	chr10_28523033_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-454-3p	28523031	28523037	7mer-m8	28523030	28523051	148	-11.43
CAediting_740526	chr10_28523205_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4680-5p	28523201	28523206	6mer	28523200	28523220	146	-20.36
CAediting_740549	chr10_28523730_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4715-3p	28523730	28523736	7mer-m8	28523729	28523750	153	-26.73
CAediting_740548	chr10_28523714_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4731-5p	28523712	28523717	6mer	28523711	28523731	146	-26.35
CAediting_740539	chr10_28523667_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-5001-3p	28523665	28523671	7mer-m8	28523664	28523688	153	-21.28
CAediting_740516	chr10_28523151_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-502-5p	28523148	28523154	7mer-m8	28523147	28523166	151	-17.96
CAediting_740515	chr10_28523148_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-502-5p	28523148	28523154	7mer-m8	28523147	28523166	151	-17.96
CAediting_740532	chr10_28523253_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-5089-5p	28523247	28523254	8mer-1a	28523247	28523266	146	-13.81
CAediting_740514	chr10_28523118_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-513a-5p	28523118	28523124	7mer-m8	28523117	28523134	152	-19.8
CAediting_740503	chr10_28522989_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-627-3p	28522984	28522991	8mer-1a	28522984	28523003	150	-13.06
CAediting_740514	chr10_28523118_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-638	28523113	28523119	7mer-1a	28523113	28523137	155	-32.67
CAediting_740513	chr10_28523113_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6506-5p	28523112	28523118	7mer-m8	28523111	28523133	144	-18.31
CAediting_740538	chr10_28523654_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6511b-3p	28523653	28523658	6mer	28523652	28523674	140	-26.13
CAediting_740536	chr10_28523620_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6726-3p	28523620	28523625	6mer	28523611	28523631	141	-28.91
CAediting_740510	chr10_28523092_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6747-3p	28523089	28523096	8mer-1a	28523089	28523111	150	-25.55
CAediting_740549	chr10_28523730_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6767-3p	28523726	28523732	7mer-m8	28523725	28523746	151	-21.67
CAediting_740538	chr10_28523654_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6784-3p	28523653	28523658	6mer	28523652	28523674	151	-31.03
CAediting_740539	chr10_28523667_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6836-3p	28523667	28523673	7mer-m8	28523666	28523686	140	-15.21
CAediting_740538	chr10_28523654_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-6862-3p	28523653	28523658	6mer	28523652	28523676	141	-28.94
CAediting_740513	chr10_28523113_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-769-3p	28523113	28523119	7mer-m8	28523112	28523134	149	-23.12
CAediting_740514	chr10_28523118_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-769-3p	28523113	28523119	7mer-m8	28523112	28523134	149	-23.12

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1351755	chr19_40282625_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-641	28524183	28524190	8mer-1a	28524183	28524206	142	-11.72
CAediting_228905	chr2_188297554_+	ENSG00000254635.4	ENST00000527986.4	hsa-miR-561-3p	28523005	28523011	7mer-m8	28523004	28523024	144	-14.81
CAediting_414656	chr5_72878640_+	ENSG00000254635.4	ENST00000527986.4	hsa-miR-4804-3p	28522959	28522966	8mer-1a	28522959	28522979	144	-12.43
CAediting_1524209	chrX_134546392_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-503-5p	28532517	28532523	7mer-m8	28532516	28532538	148	-22.58

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1524209	chrX_134546392_-	ENSG00000254635.4	ENST00000527986.4	hsa-miR-503-5p	28532547	28532553	7mer-m8	28532546	28532568	145	-22.7

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for WAC-AS1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for WAC-AS1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
THCA	CAediting_740503	chr10_28522989_-	0.0220581278922744	0.279354223395728	.	.	.	.
BRCA	CAediting_740539	chr10_28523667_-	0.00648182245592127	0.144240066416964	.	.	.	.
LUSC	CAediting_740539	chr10_28523667_-	.	.	.	.	0.0126597755668771	0.193143599715973
KIRP	CAediting_740539	chr10_28523667_-	0.000192777889386041	0.466960389630535	.	.	.	.
OV	CAediting_740556	chr10_28525115_-	.	.	.	.	0.00980971509390847	0.20052286623111
BRCA	CAediting_740572	chr10_28525236_-	0.038035027795842	0.20779013863192	.	.	.	.
LGG	CAediting_740591	chr10_28525594_-	0.000288728639163993	0.231071928329922	0.00311705292296331	0.189275240763381	.	.
BRCA	CAediting_740591	chr10_28525594_-	9.28753692198807e-08	0.253454793298775	.	.	.	.
LIHC	CAediting_740591	chr10_28525594_-	0.0404894789540349	0.260971113407066	.	.	.	.
LUAD	CAediting_740591	chr10_28525594_-	0.000499630521514831	0.341844816809906	.	.	.	.
STAD	CAediting_740591	chr10_28525594_-	0.00104810836328726	0.311112542993484	.	.	.	.
THCA	CAediting_740591	chr10_28525594_-	0.0421414659530796	0.182065392442143	.	.	.	.
PCPG	CAediting_740591	chr10_28525594_-	.	.	0.0122810670864752	0.313742874253553	.	.
LGG	CAediting_740601	chr10_28525659_-	.	.	0.0334572640468147	0.282168905580952	.	.
BLCA	CAediting_740604	chr10_28525686_-	3.31010603206217e-10	0.34925917034309	0.0434044156631111	0.115550003786192	.	.
BRCA	CAediting_740604	chr10_28525686_-	1.58426882161118e-22	0.316163865975906	.	.	.	.
LIHC	CAediting_740604	chr10_28525686_-	0.0119306721613796	0.208299343296974	.	.	.	.
CESC	CAediting_740604	chr10_28525686_-	1.56373777421983e-06	0.362743149126976	.	.	.	.
LUAD	CAediting_740604	chr10_28525686_-	0.00183354396763575	0.180084631377886	.	.	.	.
COAD	CAediting_740604	chr10_28525686_-	0.000909862105329453	0.290823787361827	.	.	.	.
LUSC	CAediting_740604	chr10_28525686_-	1.24068286473895e-09	0.326917013138742	.	.	.	.
PRAD	CAediting_740604	chr10_28525686_-	0.000223101509206545	0.179191607009449	.	.	.	.
HNSC	CAediting_740604	chr10_28525686_-	0.000169386685123445	0.226933307236189	.	.	.	.
THCA	CAediting_740604	chr10_28525686_-	1.56211586196451e-06	0.228943114168667	.	.	.	.
KIRC	CAediting_740604	chr10_28525686_-	6.72029843956046e-06	0.217955908059286	.	.	.	.
UCEC	CAediting_740604	chr10_28525686_-	1.23369868701771e-07	0.340815414031508	.	.	.	.
KIRP	CAediting_740604	chr10_28525686_-	0.00298206305850925	0.194152639035651	.	.	.	.
OV	CAediting_740604	chr10_28525686_-	0.00010003787044046	0.213799451690325	.	.	.	.
PAAD	CAediting_740604	chr10_28525686_-	0.00863440802250011	0.226884364101994	.	.	.	.
PCPG	CAediting_740604	chr10_28525686_-	0.000578210272255455	0.327344217121595	.	.	.	.
SKCM	CAediting_740604	chr10_28525686_-	1.91129680677477e-05	0.259809279505143	.	.	.	.
MESO	CAediting_740604	chr10_28525686_-	0.0102337549334891	0.32913636155223	.	.	.	.
SARC	CAediting_740604	chr10_28525686_-	0.000340127167820008	0.262694114110535	.	.	.	.
TGCT	CAediting_740604	chr10_28525686_-	0.00071319774621748	0.36208508525452	.	.	.	.
THYM	CAediting_740604	chr10_28525686_-	0.00202201504057354	0.293876281315149	.	.	.	.
BLCA	CAediting_740605	chr10_28525689_-	7.57291703631835e-06	0.271626168038478	.	.	.	.
BRCA	CAediting_740605	chr10_28525689_-	3.30919631845116e-14	0.257087480132384	.	.	0.0371964344452825	0.0717344207289613
LIHC	CAediting_740605	chr10_28525689_-	0.0130868771800246	0.212306133889132	.	.	.	.
CESC	CAediting_740605	chr10_28525689_-	0.00034605993036885	0.29817176417671	.	.	.	.
COAD	CAediting_740605	chr10_28525689_-	8.87675999737788e-05	0.364898586623331	.	.	.	.
LUSC	CAediting_740605	chr10_28525689_-	1.24057776820216e-06	0.280699256019896	.	.	.	.
PRAD	CAediting_740605	chr10_28525689_-	4.2592062270464e-05	0.202646908384459	0.0140700884686404	0.122388047023552	.	.
HNSC	CAediting_740605	chr10_28525689_-	0.000114360400143751	0.256042047610606	.	.	.	.
STAD	CAediting_740605	chr10_28525689_-	0.0156588363834932	0.137835737833509	.	.	.	.
THCA	CAediting_740605	chr10_28525689_-	8.87240875385654e-05	0.193516718616267	.	.	.	.
UCEC	CAediting_740605	chr10_28525689_-	0.0296726525053589	0.160793097293594	.	.	.	.
KIRP	CAediting_740605	chr10_28525689_-	0.00755969917315478	0.18213145277674	.	.	.	.
LAML	CAediting_740605	chr10_28525689_-	.	.	.	.	0.0428876488777798	0.19800969630242
PAAD	CAediting_740605	chr10_28525689_-	0.0155136097126035	0.212709288744319	.	.	.	.
MESO	CAediting_740605	chr10_28525689_-	0.00270798541987342	0.407581858609731	.	.	0.0247084477935663	0.311240068743944
SARC	CAediting_740605	chr10_28525689_-	0.00204658771651588	0.236971568626317	.	.	.	.
TGCT	CAediting_740605	chr10_28525689_-	0.000300846932754403	0.413948251172351	.	.	.	.
THYM	CAediting_740605	chr10_28525689_-	0.000217251740578853	0.356673175278044	.	.	.	.
THCA	CAediting_740606	chr10_28525690_-	0.00390084787937348	0.331596156748484	.	.	.	.
BLCA	CAediting_740611	chr10_28525726_-	3.5416501610157e-05	0.238709080177445	.	.	.	.
LGG	CAediting_740611	chr10_28525726_-	.	.	.	.	0.0222952818059319	0.107716024783639
BRCA	CAediting_740611	chr10_28525726_-	1.33764182630787e-10	0.215258479196359	.	.	.	.
LIHC	CAediting_740611	chr10_28525726_-	0.0073900225209325	0.250743330297022	.	.	.	.
LUAD	CAediting_740611	chr10_28525726_-	8.83946946462125e-05	0.228543982517259	.	.	.	.
LUSC	CAediting_740611	chr10_28525726_-	2.94994405252407e-06	0.263969866743442	0.0356289713291007	0.120367226853193	.	.
HNSC	CAediting_740611	chr10_28525726_-	0.0120976583752829	0.16667006499077	.	.	.	.
THCA	CAediting_740611	chr10_28525726_-	0.000113138562339987	0.189278576757621	.	.	.	.
LAML	CAediting_740611	chr10_28525726_-	0.00282314657586288	0.359335009871924	.	.	.	.
OV	CAediting_740611	chr10_28525726_-	6.77100802849015e-05	0.218824393888043	.	.	.	.
PAAD	CAediting_740611	chr10_28525726_-	0.0265224096721748	0.190951170158095	.	.	.	.
SKCM	CAediting_740611	chr10_28525726_-	2.691624577364e-05	0.264759163009633	0.00132890331794194	0.203941467759404	.	.
SARC	CAediting_740611	chr10_28525726_-	2.11723613365648e-05	0.333337232362715	.	.	.	.
TGCT	CAediting_740611	chr10_28525726_-	0.0009745779996481	0.393878998235095	.	.	.	.
LGG	CAediting_740612	chr10_28525729_-	.	.	.	.	0.0259232515576286	0.109076057872488
BRCA	CAediting_740612	chr10_28525729_-	0.00176836616826247	0.117888652937397	.	.	.	.
LUAD	CAediting_740612	chr10_28525729_-	0.0181616650096894	0.155663240831831	.	.	.	.
COAD	CAediting_740612	chr10_28525729_-	.	.	0.0141343970757685	0.256458758114655	0.0239675435609613	0.236566179413456
TGCT	CAediting_740612	chr10_28525729_-	3.69818892768956e-05	0.526137916994556	.	.	.	.
LGG	CAediting_740613	chr10_28525734_-	.	.	3.34403004595148e-08	0.501012079246004	.	.
LUAD	CAediting_740613	chr10_28525734_-	.	.	0.0209889713092569	0.325707534321438	.	.
STAD	CAediting_740613	chr10_28525734_-	.	.	7.84040112930831e-08	0.499471670163028	.	.
KIRC	CAediting_740613	chr10_28525734_-	.	.	1.38175326389633e-05	0.316918528473133	.	.
KIRP	CAediting_740613	chr10_28525734_-	.	.	0.00343053097112394	0.381283338797585	0.0164272429454991	0.316585256245483
SKCM	CAediting_740613	chr10_28525734_-	.	.	0.00308430290134315	0.385241041758209	.	.
BRCA	CAediting_740614	chr10_28525735_-	0.00173425888970753	0.19047300415091	.	.	.	.
LUAD	CAediting_740614	chr10_28525735_-	0.00265262345676035	0.361465081414937	.	.	.	.
BRCA	CAediting_740615	chr10_28525742_-	.	.	0.0143099465054108	0.237310370304923	.	.

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Relation with cancer stages for WAC-AS1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_740605	chr10_28525689_-	0.0268791304676574	0.136486832691381
BLCA	pathologic_stage	CAediting_740611	chr10_28525726_-	0.0135057071132674	0.144415375587083
BRCA	pathologic_stage	CAediting_740580	chr10_28525313_-	0.00144762839370365	0.260369535630466
BRCA	pathologic_stage	CAediting_740581	chr10_28525314_-	0.0102453602644201	0.278731513795909
BRCA	pathologic_stage	CAediting_740611	chr10_28525726_-	0.0311321223979341	0.0737631242270148
ESCA	clinical_stage	CAediting_740605	chr10_28525689_-	0.0036298606459136	-0.411875206540276
ESCA	clinical_stage	CAediting_740611	chr10_28525726_-	0.0103089987312593	-0.363235475848037
HNSC	clinical_stage	CAediting_740604	chr10_28525686_-	0.0245984455738902	0.137803185286196
HNSC	clinical_stage	CAediting_740611	chr10_28525726_-	0.035184278069507	0.141447981427871
KIRC	pathologic_stage	CAediting_740539	chr10_28523667_-	0.00564211235671277	0.226475143590378
KIRC	pathologic_stage	CAediting_740605	chr10_28525689_-	0.0261762339060837	0.114372238276324
KIRC	pathologic_stage	CAediting_740606	chr10_28525690_-	0.00550819080402163	0.357012758951204
LUAD	pathologic_stage	CAediting_740605	chr10_28525689_-	0.0470305517097523	0.123530054871202
LUAD	pathologic_stage	CAediting_740612	chr10_28525729_-	0.0156433206341498	0.160630521444229
OV	clinical_stage	CAediting_740545	chr10_28523698_-	0.0172586052297438	-0.198184185033088
OV	clinical_stage	CAediting_740554	chr10_28525103_-	0.0465748987799301	-0.285725015322512
TGCT	clinical_stage	CAediting_740611	chr10_28525726_-	0.0115350712290251	-0.440943762257044
TGCT	pathologic_stage	CAediting_740611	chr10_28525726_-	0.0147667207943197	-0.440793437018399
THCA	pathologic_stage	CAediting_740605	chr10_28525689_-	0.00410043129005522	0.142868874669336
THCA	pathologic_stage	CAediting_740612	chr10_28525729_-	0.00279929310696901	0.162580755651776
UCEC	clinical_stage	CAediting_740605	chr10_28525689_-	0.0345678889873121	-0.156335194509085

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Relation with survival for WAC-AS1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_740556	chr10_28525115_-	0.0355753977672177	0.0139792	5.30693e-05
LIHC	CAediting_740539	chr10_28523667_-	0.0375475297478791	0.0311809	0.00798364
COAD	CAediting_740605	chr10_28525689_-	0.0349944676948156	0.00548864	0.00870397
OV	CAediting_740545	chr10_28523698_-	0.0478445950890209	0.0338018	219.291
OV	CAediting_740561	chr10_28525143_-	0.0210792682769344	0.0296895	23.4308

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RelatedDrugs for WAC-AS1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for WAC-AS1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene