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Editing gene: ATAD3C (CAeditome ID:219293)

Gene summary for ATAD3C

Gene summary

Gene information	Gene symbol	ATAD3C
	Gene ID	219293
	Gene name	ATPase family AAA domain containing 3C
	Synonyms	-
	Cytomap	1p36.33
	Type of gene	protein-coding
	Description	ATPase family AAA domain-containing protein 3CATPase family, AAA domain containing 3A
	Modification date	20210518
	UniProtAcc	Q5T2N8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ATAD3C	GO:0005739	ATPase family AAA domain-containing protein 3C	0000052

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RNA A-to-I events for ATAD3C

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000215915.8

RNA A-to-I editing events in Cancer.

CAediting_1199(1450065, +), CAediting_1200(1450073, +), CAediting_1201(1450074, +), CAediting_1202(1450140, +), CAediting_1203(1450141, +), CAediting_1204(1450150, +), CAediting_1205(1450160, +), CAediting_1206(1450163, +), CAediting_1207(1450164, +), CAediting_1208(1450165, +), CAediting_1209(1450166, +), CAediting_1210(1450169, +), CAediting_1211(1450172, +), CAediting_1212(1450173, +), CAediting_1213(1450174, +), CAediting_1214(1450175, +), CAediting_1215(1450178, +), CAediting_1216(1450210, +), CAediting_1217(1450214, +), CAediting_1218(1450245, +), CAediting_1219(1450246, +), CAediting_1220(1450251, +), CAediting_1221(1450270, +), CAediting_1222(1450273, +), CAediting_1223(1450280, +), CAediting_1224(1450307, +), CAediting_1225(1450308, +), CAediting_1226(1450311, +), CAediting_1227(1450313, +), CAediting_1228(1452679, +), CAediting_1229(1452693, +), CAediting_1230(1452711, +), CAediting_1231(1452714, +), CAediting_1232(1452720, +), CAediting_1233(1452731, +), CAediting_1234(1461249, +), CAediting_1235(1461268, +), CAediting_1236(1463990, +), CAediting_1237(1464039, +), CAediting_1238(1464078, +), CAediting_1239(1464132, +), CAediting_1240(1464686, +), CAediting_1241(1465314, +), CAediting_1242(1465428, +), CAediting_1243(1465470, +), CAediting_1244(1466139, +), CAediting_1245(1466365, +), CAediting_1246(1466406, +), CAediting_1247(1466460, +), CAediting_1248(1469028, +), CAediting_1249(1469029, +), CAediting_1250(1469042, +), CAediting_1251(1469047, +), CAediting_1252(1469061, +), CAediting_1253(1469063, +), CAediting_1254(1469076, +), CAediting_1255(1469127, +), CAediting_1256(1469128, +), CAediting_1257(1469129, +), CAediting_1258(1469130, +), CAediting_1259(1469131, +), CAediting_1260(1469139, +), CAediting_1261(1469155, +), CAediting_1262(1469156, +), CAediting_1263(1469165, +), CAediting_1264(1469166, +), CAediting_1265(1469171, +), CAediting_1266(1469175, +), CAediting_1267(1469179, +), CAediting_1268(1469182, +), CAediting_1269(1469192, +), CAediting_1270(1469201, +), CAediting_1271(1469206, +), CAediting_1272(1469215, +), CAediting_1273(1469245, +), CAediting_1274(1469246, +), CAediting_1275(1469266, +), CAediting_1276(1469269, +), CAediting_1277(1469276, +), CAediting_1278(1469290, +), CAediting_1279(1469291, +), CAediting_1280(1469292, +), CAediting_1281(1469293, +), CAediting_1282(1469295, +), CAediting_1283(1469296, +), CAediting_1284(1469298, +), CAediting_1285(1469299, +), CAediting_1286(1469301, +), CAediting_1287(1469302, +), CAediting_1288(1469310, +), CAediting_1289(1469317, +), CAediting_1290(1469333, +), CAediting_1291(1469358, +), CAediting_1292(1469384, +), CAediting_1293(1469402, +), CAediting_1294(1469422, +), CAediting_1295(1469561, +), CAediting_1296(1469567, +), CAediting_1297(1469585, +), CAediting_1298(1469597, +), CAediting_1299(1469610, +), CAediting_1300(1469611, +), CAediting_1301(1469614, +), CAediting_1302(1469615, +), CAediting_1303(1469637, +), CAediting_1304(1469638, +), CAediting_1305(1469650, +), CAediting_1306(1469652, +), CAediting_1307(1469659, +), CAediting_1308(1469663, +), CAediting_1309(1469702, +), CAediting_1310(1469737, +), CAediting_1311(1469753, +), CAediting_1312(1469759, +),

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RNA editing positional annotations for ATAD3C using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1199	chr1_1450065_+	UTR5
CAediting_1200	chr1_1450073_+	UTR5
CAediting_1201	chr1_1450074_+	UTR5
CAediting_1202	chr1_1450140_+	UTR5
CAediting_1203	chr1_1450141_+	UTR5
CAediting_1204	chr1_1450150_+	UTR5
CAediting_1205	chr1_1450160_+	UTR5
CAediting_1206	chr1_1450163_+	UTR5
CAediting_1207	chr1_1450164_+	UTR5
CAediting_1208	chr1_1450165_+	UTR5
CAediting_1209	chr1_1450166_+	UTR5
CAediting_1210	chr1_1450169_+	UTR5
CAediting_1211	chr1_1450172_+	UTR5
CAediting_1212	chr1_1450173_+	UTR5
CAediting_1213	chr1_1450174_+	UTR5
CAediting_1214	chr1_1450175_+	UTR5
CAediting_1215	chr1_1450178_+	UTR5
CAediting_1216	chr1_1450210_+	UTR5
CAediting_1217	chr1_1450214_+	UTR5
CAediting_1218	chr1_1450245_+	UTR5
CAediting_1219	chr1_1450246_+	UTR5
CAediting_1220	chr1_1450251_+	UTR5
CAediting_1221	chr1_1450270_+	UTR5
CAediting_1222	chr1_1450273_+	UTR5
CAediting_1223	chr1_1450280_+	UTR5
CAediting_1224	chr1_1450307_+	UTR5
CAediting_1225	chr1_1450308_+	UTR5
CAediting_1226	chr1_1450311_+	UTR5
CAediting_1227	chr1_1450313_+	UTR5
CAediting_1228	chr1_1452679_+	intronic
CAediting_1229	chr1_1452693_+	intronic
CAediting_1230	chr1_1452711_+	intronic
CAediting_1231	chr1_1452714_+	intronic
CAediting_1232	chr1_1452720_+	intronic
CAediting_1233	chr1_1452731_+	intronic
CAediting_1234	chr1_1461249_+	intronic
CAediting_1235	chr1_1461268_+	intronic
CAediting_1236	chr1_1463990_+	ncRNA_intronic
CAediting_1237	chr1_1464039_+	ncRNA_intronic
CAediting_1238	chr1_1464078_+	ncRNA_intronic
CAediting_1239	chr1_1464132_+	ncRNA_intronic
CAediting_1240	chr1_1464686_+	ncRNA_intronic
CAediting_1241	chr1_1465314_+	ncRNA_intronic
CAediting_1242	chr1_1465428_+	ncRNA_intronic
CAediting_1243	chr1_1465470_+	ncRNA_intronic
CAediting_1244	chr1_1466139_+	ncRNA_intronic
CAediting_1245	chr1_1466365_+	ncRNA_intronic
CAediting_1246	chr1_1466406_+	ncRNA_intronic
CAediting_1247	chr1_1466460_+	ncRNA_intronic
CAediting_1248	chr1_1469028_+	UTR3
CAediting_1249	chr1_1469029_+	UTR3
CAediting_1250	chr1_1469042_+	UTR3
CAediting_1251	chr1_1469047_+	UTR3
CAediting_1252	chr1_1469061_+	UTR3
CAediting_1253	chr1_1469063_+	UTR3
CAediting_1254	chr1_1469076_+	UTR3
CAediting_1255	chr1_1469127_+	UTR3
CAediting_1256	chr1_1469128_+	UTR3
CAediting_1257	chr1_1469129_+	UTR3
CAediting_1258	chr1_1469130_+	UTR3
CAediting_1259	chr1_1469131_+	UTR3
CAediting_1260	chr1_1469139_+	UTR3
CAediting_1261	chr1_1469155_+	UTR3
CAediting_1262	chr1_1469156_+	UTR3
CAediting_1263	chr1_1469165_+	UTR3
CAediting_1264	chr1_1469166_+	UTR3
CAediting_1265	chr1_1469171_+	UTR3
CAediting_1266	chr1_1469175_+	UTR3
CAediting_1267	chr1_1469179_+	UTR3
CAediting_1268	chr1_1469182_+	UTR3
CAediting_1269	chr1_1469192_+	UTR3
CAediting_1270	chr1_1469201_+	UTR3
CAediting_1271	chr1_1469206_+	UTR3
CAediting_1272	chr1_1469215_+	UTR3
CAediting_1273	chr1_1469245_+	UTR3
CAediting_1274	chr1_1469246_+	UTR3
CAediting_1275	chr1_1469266_+	UTR3
CAediting_1276	chr1_1469269_+	UTR3
CAediting_1277	chr1_1469276_+	UTR3
CAediting_1278	chr1_1469290_+	UTR3
CAediting_1279	chr1_1469291_+	UTR3
CAediting_1280	chr1_1469292_+	UTR3
CAediting_1281	chr1_1469293_+	UTR3
CAediting_1282	chr1_1469295_+	UTR3
CAediting_1283	chr1_1469296_+	UTR3
CAediting_1284	chr1_1469298_+	UTR3
CAediting_1285	chr1_1469299_+	UTR3
CAediting_1286	chr1_1469301_+	UTR3
CAediting_1287	chr1_1469302_+	UTR3
CAediting_1288	chr1_1469310_+	UTR3
CAediting_1289	chr1_1469317_+	UTR3
CAediting_1290	chr1_1469333_+	UTR3
CAediting_1291	chr1_1469358_+	UTR3
CAediting_1292	chr1_1469384_+	UTR3
CAediting_1293	chr1_1469402_+	UTR3
CAediting_1294	chr1_1469422_+	UTR3
CAediting_1295	chr1_1469561_+	UTR3
CAediting_1296	chr1_1469567_+	UTR3
CAediting_1297	chr1_1469585_+	UTR3
CAediting_1298	chr1_1469597_+	UTR3
CAediting_1299	chr1_1469610_+	UTR3
CAediting_1300	chr1_1469611_+	UTR3
CAediting_1301	chr1_1469614_+	UTR3
CAediting_1302	chr1_1469615_+	UTR3
CAediting_1303	chr1_1469637_+	UTR3
CAediting_1304	chr1_1469638_+	UTR3
CAediting_1305	chr1_1469650_+	UTR3
CAediting_1306	chr1_1469652_+	UTR3
CAediting_1307	chr1_1469659_+	UTR3
CAediting_1308	chr1_1469663_+	UTR3
CAediting_1309	chr1_1469702_+	UTR3
CAediting_1310	chr1_1469737_+	UTR3
CAediting_1311	chr1_1469753_+	UTR3
CAediting_1312	chr1_1469759_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1199	chr1_1450065_+	SINE	Alu	AluY
CAediting_1200	chr1_1450073_+	SINE	Alu	AluY
CAediting_1201	chr1_1450074_+	SINE	Alu	AluY
CAediting_1202	chr1_1450140_+	SINE	Alu	AluY
CAediting_1203	chr1_1450141_+	SINE	Alu	AluY
CAediting_1204	chr1_1450150_+	SINE	Alu	AluY
CAediting_1205	chr1_1450160_+	SINE	Alu	AluY
CAediting_1206	chr1_1450163_+	SINE	Alu	AluY
CAediting_1207	chr1_1450164_+	SINE	Alu	AluY
CAediting_1208	chr1_1450165_+	SINE	Alu	AluY
CAediting_1209	chr1_1450166_+	SINE	Alu	AluY
CAediting_1210	chr1_1450169_+	SINE	Alu	AluY
CAediting_1211	chr1_1450172_+	SINE	Alu	AluY
CAediting_1212	chr1_1450173_+	SINE	Alu	AluY
CAediting_1213	chr1_1450174_+	SINE	Alu	AluY
CAediting_1214	chr1_1450175_+	SINE	Alu	AluY
CAediting_1215	chr1_1450178_+	SINE	Alu	AluY
CAediting_1216	chr1_1450210_+	SINE	Alu	AluY
CAediting_1217	chr1_1450214_+	SINE	Alu	AluY
CAediting_1218	chr1_1450245_+	SINE	Alu	AluY
CAediting_1219	chr1_1450246_+	SINE	Alu	AluY
CAediting_1220	chr1_1450251_+	SINE	Alu	AluY
CAediting_1221	chr1_1450270_+	SINE	Alu	AluY
CAediting_1222	chr1_1450273_+	SINE	Alu	AluY
CAediting_1223	chr1_1450280_+	SINE	Alu	AluY
CAediting_1224	chr1_1450307_+	SINE	Alu	AluY
CAediting_1225	chr1_1450308_+	SINE	Alu	AluY
CAediting_1226	chr1_1450311_+	SINE	Alu	AluY
CAediting_1227	chr1_1450313_+	SINE	Alu	AluY
CAediting_1228	chr1_1452679_+	SINE	Alu	AluSc8
CAediting_1229	chr1_1452693_+	SINE	Alu	AluSc8
CAediting_1230	chr1_1452711_+	SINE	Alu	AluSc8
CAediting_1231	chr1_1452714_+	SINE	Alu	AluSc8
CAediting_1232	chr1_1452720_+	SINE	Alu	AluSc8
CAediting_1233	chr1_1452731_+	SINE	Alu	AluSc8
CAediting_1234	chr1_1461249_+	SINE	Alu	AluSq2
CAediting_1235	chr1_1461268_+	SINE	Alu	AluSq2
CAediting_1236	chr1_1463990_+	SINE	Alu	AluSz
CAediting_1237	chr1_1464039_+	SINE	Alu	AluSz
CAediting_1238	chr1_1464078_+	SINE	Alu	AluSz
CAediting_1239	chr1_1464132_+	SINE	Alu	AluSz
CAediting_1240	chr1_1464686_+	SINE	Alu	AluSq2
CAediting_1241	chr1_1465314_+	SINE	Alu	AluY
CAediting_1242	chr1_1465428_+	SINE	Alu	AluY
CAediting_1243	chr1_1465470_+	SINE	Alu	AluY
CAediting_1244	chr1_1466139_+	SINE	Alu	AluSp
CAediting_1245	chr1_1466365_+	SINE	Alu	AluYh3a3
CAediting_1246	chr1_1466406_+	SINE	Alu	AluYh3a3
CAediting_1247	chr1_1466460_+	SINE	Alu	AluYh3a3
CAediting_1248	chr1_1469028_+	SINE	Alu	AluSq2
CAediting_1249	chr1_1469029_+	SINE	Alu	AluSq2
CAediting_1250	chr1_1469042_+	SINE	Alu	AluSq2
CAediting_1251	chr1_1469047_+	SINE	Alu	AluSq2
CAediting_1252	chr1_1469061_+	SINE	Alu	AluSq2
CAediting_1253	chr1_1469063_+	SINE	Alu	AluSq2
CAediting_1254	chr1_1469076_+	SINE	Alu	AluSq2
CAediting_1255	chr1_1469127_+	SINE	Alu	AluSq2
CAediting_1256	chr1_1469128_+	SINE	Alu	AluSq2
CAediting_1257	chr1_1469129_+	SINE	Alu	AluSq2
CAediting_1258	chr1_1469130_+	SINE	Alu	AluSq2
CAediting_1259	chr1_1469131_+	SINE	Alu	AluSq2
CAediting_1260	chr1_1469139_+	SINE	Alu	AluSq2
CAediting_1261	chr1_1469155_+	SINE	Alu	AluSq2
CAediting_1262	chr1_1469156_+	SINE	Alu	AluSq2
CAediting_1263	chr1_1469165_+	SINE	Alu	AluSq2
CAediting_1264	chr1_1469166_+	SINE	Alu	AluSq2
CAediting_1265	chr1_1469171_+	SINE	Alu	AluSq2
CAediting_1266	chr1_1469175_+	SINE	Alu	AluSq2
CAediting_1267	chr1_1469179_+	SINE	Alu	AluSq2
CAediting_1268	chr1_1469182_+	SINE	Alu	AluSq2
CAediting_1269	chr1_1469192_+	SINE	Alu	AluSq2
CAediting_1270	chr1_1469201_+	SINE	Alu	AluSq2
CAediting_1271	chr1_1469206_+	SINE	Alu	AluSq2
CAediting_1272	chr1_1469215_+	SINE	Alu	AluSq2
CAediting_1273	chr1_1469245_+	SINE	Alu	AluSq2
CAediting_1274	chr1_1469246_+	SINE	Alu	AluSq2
CAediting_1275	chr1_1469266_+	SINE	Alu	AluSq2
CAediting_1276	chr1_1469269_+	SINE	Alu	AluSq2
CAediting_1277	chr1_1469276_+	SINE	Alu	AluSq2
CAediting_1278	chr1_1469290_+	SINE	Alu	AluSq2
CAediting_1279	chr1_1469291_+	SINE	Alu	AluSq2
CAediting_1280	chr1_1469292_+	SINE	Alu	AluSq2
CAediting_1281	chr1_1469293_+	SINE	Alu	AluSq2
CAediting_1282	chr1_1469295_+	SINE	Alu	AluSq2
CAediting_1283	chr1_1469296_+	SINE	Alu	AluSq2
CAediting_1284	chr1_1469298_+	SINE	Alu	AluSq2
CAediting_1285	chr1_1469299_+	SINE	Alu	AluSq2
CAediting_1286	chr1_1469301_+	SINE	Alu	AluSq2
CAediting_1287	chr1_1469302_+	SINE	Alu	AluSq2
CAediting_1288	chr1_1469310_+	SINE	Alu	AluSc8
CAediting_1289	chr1_1469317_+	SINE	Alu	AluSc8
CAediting_1290	chr1_1469333_+	SINE	Alu	AluSc8
CAediting_1291	chr1_1469358_+	SINE	Alu	AluSc8
CAediting_1292	chr1_1469384_+	SINE	Alu	AluSc8
CAediting_1293	chr1_1469402_+	SINE	Alu	AluSc8
CAediting_1294	chr1_1469422_+	SINE	Alu	AluSc8
CAediting_1295	chr1_1469561_+	SINE	Alu	AluJo
CAediting_1296	chr1_1469567_+	SINE	Alu	AluJo
CAediting_1297	chr1_1469585_+	SINE	Alu	AluJo
CAediting_1298	chr1_1469597_+	SINE	Alu	AluJo
CAediting_1299	chr1_1469610_+	SINE	Alu	AluJo
CAediting_1300	chr1_1469611_+	SINE	Alu	AluJo
CAediting_1301	chr1_1469614_+	SINE	Alu	AluJo
CAediting_1302	chr1_1469615_+	SINE	Alu	AluJo
CAediting_1303	chr1_1469637_+	SINE	Alu	AluJo
CAediting_1304	chr1_1469638_+	SINE	Alu	AluJo
CAediting_1305	chr1_1469650_+	SINE	Alu	AluJo
CAediting_1306	chr1_1469652_+	SINE	Alu	AluJo
CAediting_1307	chr1_1469659_+	SINE	Alu	AluJo
CAediting_1308	chr1_1469663_+	SINE	Alu	AluJo
CAediting_1309	chr1_1469702_+	SINE	Alu	AluSx
CAediting_1310	chr1_1469737_+	SINE	Alu	AluSx
CAediting_1311	chr1_1469753_+	SINE	Alu	AluSx
CAediting_1312	chr1_1469759_+	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for ATAD3C

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000215915.8.ATAD3C.

Correlation between RNA A-to-I editing and PSI for ENSG00000215915.8.ATAD3C.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATAD3C

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LUAD.CAediting_1299.ENSG00000215915.ATAD3C.png
Soverview

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Protein coding region RNA A-to-I editings for ATAD3C

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ATAD3C

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ATAD3C

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000378785.5	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_1199	ENST00000378785.5	chr1_1450065_+	-1622.15	-1622.85	-1694.75
CAediting_1200	ENST00000378785.5	chr1_1450073_+	-1623.05	-1622.85	-1694.75
CAediting_1201	ENST00000378785.5	chr1_1450074_+	-1622.85	-1622.85	-1694.75
CAediting_1202	ENST00000378785.5	chr1_1450140_+	-1622.95	-1622.85	-1694.75
CAediting_1203	ENST00000378785.5	chr1_1450141_+	-1622.55	-1622.85	-1694.75
CAediting_1204	ENST00000378785.5	chr1_1450150_+	-1622.85	-1622.85	-1694.75
CAediting_1205	ENST00000378785.5	chr1_1450160_+	-1622.85	-1622.85	-1694.75
CAediting_1206	ENST00000378785.5	chr1_1450163_+	-1623.55	-1622.85	-1694.75
CAediting_1207	ENST00000378785.5	chr1_1450164_+	-1623.25	-1622.85	-1694.75
CAediting_1208	ENST00000378785.5	chr1_1450165_+	-1623.85	-1622.85	-1694.75
CAediting_1209	ENST00000378785.5	chr1_1450166_+	-1622.85	-1622.85	-1694.75
CAediting_1210	ENST00000378785.5	chr1_1450169_+	-1622.85	-1622.85	-1694.75
CAediting_1211	ENST00000378785.5	chr1_1450172_+	-1622.85	-1622.85	-1694.75
CAediting_1212	ENST00000378785.5	chr1_1450173_+	-1622.95	-1622.85	-1694.75
CAediting_1213	ENST00000378785.5	chr1_1450174_+	-1622.95	-1622.85	-1694.75
CAediting_1214	ENST00000378785.5	chr1_1450175_+	-1626.65	-1622.85	-1694.75
CAediting_1215	ENST00000378785.5	chr1_1450178_+	-1622.55	-1622.85	-1694.75
CAediting_1216	ENST00000378785.5	chr1_1450210_+	-1624.75	-1622.85	-1694.75
CAediting_1217	ENST00000378785.5	chr1_1450214_+	-1622.85	-1622.85	-1694.75
CAediting_1218	ENST00000378785.5	chr1_1450245_+	-1626.15	-1622.85	-1694.75
CAediting_1219	ENST00000378785.5	chr1_1450246_+	-1622.55	-1622.85	-1694.75
CAediting_1220	ENST00000378785.5	chr1_1450251_+	-1624.95	-1622.85	-1694.75
CAediting_1221	ENST00000378785.5	chr1_1450270_+	-1622.85	-1622.85	-1694.75
CAediting_1222	ENST00000378785.5	chr1_1450273_+	-1624.75	-1622.85	-1694.75
CAediting_1223	ENST00000378785.5	chr1_1450280_+	-1619.45	-1622.85	-1694.75
CAediting_1224	ENST00000378785.5	chr1_1450307_+	-1622.85	-1622.85	-1694.75
CAediting_1225	ENST00000378785.5	chr1_1450308_+	-1628.85	-1622.85	-1694.75
CAediting_1226	ENST00000378785.5	chr1_1450311_+	-1622.05	-1622.85	-1694.75
CAediting_1227	ENST00000378785.5	chr1_1450313_+	-1622.25	-1622.85	-1694.75
CAediting_1248	ENST00000378785.5	chr1_1469028_+	-1622.95	-1622.85	-1694.75
CAediting_1249	ENST00000378785.5	chr1_1469029_+	-1622.85	-1622.85	-1694.75
CAediting_1250	ENST00000378785.5	chr1_1469042_+	-1622.45	-1622.85	-1694.75
CAediting_1251	ENST00000378785.5	chr1_1469047_+	-1624.25	-1622.85	-1694.75
CAediting_1252	ENST00000378785.5	chr1_1469061_+	-1622.85	-1622.85	-1694.75
CAediting_1253	ENST00000378785.5	chr1_1469063_+	-1622.35	-1622.85	-1694.75
CAediting_1254	ENST00000378785.5	chr1_1469076_+	-1623.25	-1622.85	-1694.75
CAediting_1255	ENST00000378785.5	chr1_1469127_+	-1622.85	-1622.85	-1694.75
CAediting_1256	ENST00000378785.5	chr1_1469128_+	-1622.85	-1622.85	-1694.75
CAediting_1257	ENST00000378785.5	chr1_1469129_+	-1622.85	-1622.85	-1694.75
CAediting_1258	ENST00000378785.5	chr1_1469130_+	-1622.85	-1622.85	-1694.75
CAediting_1259	ENST00000378785.5	chr1_1469131_+	-1622.85	-1622.85	-1694.75
CAediting_1260	ENST00000378785.5	chr1_1469139_+	-1623.85	-1622.85	-1694.75
CAediting_1261	ENST00000378785.5	chr1_1469155_+	-1626.45	-1622.85	-1694.75
CAediting_1262	ENST00000378785.5	chr1_1469156_+	-1622.85	-1622.85	-1694.75
CAediting_1263	ENST00000378785.5	chr1_1469165_+	-1622.85	-1622.85	-1694.75
CAediting_1264	ENST00000378785.5	chr1_1469166_+	-1622.85	-1622.85	-1694.75
CAediting_1265	ENST00000378785.5	chr1_1469171_+	-1622.15	-1622.85	-1694.75
CAediting_1266	ENST00000378785.5	chr1_1469175_+	-1621.85	-1622.85	-1694.75
CAediting_1267	ENST00000378785.5	chr1_1469179_+	-1622.85	-1622.85	-1694.75
CAediting_1268	ENST00000378785.5	chr1_1469182_+	-1621.85	-1622.85	-1694.75
CAediting_1269	ENST00000378785.5	chr1_1469192_+	-1622.15	-1622.85	-1694.75
CAediting_1270	ENST00000378785.5	chr1_1469201_+	-1626.45	-1622.85	-1694.75
CAediting_1271	ENST00000378785.5	chr1_1469206_+	-1621.95	-1622.85	-1694.75
CAediting_1272	ENST00000378785.5	chr1_1469215_+	-1625.85	-1622.85	-1694.75
CAediting_1273	ENST00000378785.5	chr1_1469245_+	-1622.85	-1622.85	-1694.75
CAediting_1274	ENST00000378785.5	chr1_1469246_+	-1622.85	-1622.85	-1694.75
CAediting_1275	ENST00000378785.5	chr1_1469266_+	-1622.85	-1622.85	-1694.75
CAediting_1276	ENST00000378785.5	chr1_1469269_+	-1624.95	-1622.85	-1694.75
CAediting_1277	ENST00000378785.5	chr1_1469276_+	-1624.15	-1622.85	-1694.75
CAediting_1278	ENST00000378785.5	chr1_1469290_+	-1622.85	-1622.85	-1694.75
CAediting_1279	ENST00000378785.5	chr1_1469291_+	-1622.85	-1622.85	-1694.75
CAediting_1280	ENST00000378785.5	chr1_1469292_+	-1622.85	-1622.85	-1694.75
CAediting_1281	ENST00000378785.5	chr1_1469293_+	-1622.85	-1622.85	-1694.75
CAediting_1282	ENST00000378785.5	chr1_1469295_+	-1622.85	-1622.85	-1694.75
CAediting_1283	ENST00000378785.5	chr1_1469296_+	-1622.85	-1622.85	-1694.75
CAediting_1284	ENST00000378785.5	chr1_1469298_+	-1622.85	-1622.85	-1694.75
CAediting_1285	ENST00000378785.5	chr1_1469299_+	-1622.85	-1622.85	-1694.75
CAediting_1286	ENST00000378785.5	chr1_1469301_+	-1622.85	-1622.85	-1694.75
CAediting_1287	ENST00000378785.5	chr1_1469302_+	-1623.75	-1622.85	-1694.75
CAediting_1288	ENST00000378785.5	chr1_1469310_+	-1622.45	-1622.85	-1694.75
CAediting_1289	ENST00000378785.5	chr1_1469317_+	-1622.85	-1622.85	-1694.75
CAediting_1290	ENST00000378785.5	chr1_1469333_+	-1622.15	-1622.85	-1694.75
CAediting_1291	ENST00000378785.5	chr1_1469358_+	-1624.65	-1622.85	-1694.75
CAediting_1292	ENST00000378785.5	chr1_1469384_+	-1624.75	-1622.85	-1694.75
CAediting_1293	ENST00000378785.5	chr1_1469402_+	-1622.85	-1622.85	-1694.75
CAediting_1294	ENST00000378785.5	chr1_1469422_+	-1622.65	-1622.85	-1694.75
CAediting_1295	ENST00000378785.5	chr1_1469561_+	-1624.65	-1622.85	-1694.75
CAediting_1296	ENST00000378785.5	chr1_1469567_+	-1623.25	-1622.85	-1694.75
CAediting_1297	ENST00000378785.5	chr1_1469585_+	-1622.15	-1622.85	-1694.75
CAediting_1298	ENST00000378785.5	chr1_1469597_+	-1621.75	-1622.85	-1694.75
CAediting_1299	ENST00000378785.5	chr1_1469610_+	-1622.55	-1622.85	-1694.75
CAediting_1300	ENST00000378785.5	chr1_1469611_+	-1623.75	-1622.85	-1694.75
CAediting_1301	ENST00000378785.5	chr1_1469614_+	-1627.05	-1622.85	-1694.75
CAediting_1302	ENST00000378785.5	chr1_1469615_+	-1622.65	-1622.85	-1694.75
CAediting_1303	ENST00000378785.5	chr1_1469637_+	-1622.85	-1622.85	-1694.75
CAediting_1304	ENST00000378785.5	chr1_1469638_+	-1624.75	-1622.85	-1694.75
CAediting_1305	ENST00000378785.5	chr1_1469650_+	-1624.85	-1622.85	-1694.75
CAediting_1306	ENST00000378785.5	chr1_1469652_+	-1622.15	-1622.85	-1694.75
CAediting_1307	ENST00000378785.5	chr1_1469659_+	-1621.95	-1622.85	-1694.75
CAediting_1308	ENST00000378785.5	chr1_1469663_+	-1622.45	-1622.85	-1694.75
CAediting_1309	ENST00000378785.5	chr1_1469702_+	-1622.45	-1622.85	-1694.75
CAediting_1310	ENST00000378785.5	chr1_1469737_+	-1622.25	-1622.85	-1694.75
CAediting_1311	ENST00000378785.5	chr1_1469753_+	-1622.55	-1622.85	-1694.75
CAediting_1312	ENST00000378785.5	chr1_1469759_+	-1623.15	-1622.85	-1694.75

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Relation with ADAR for ATAD3C

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1299	chr1_1469610_+	0.000255286135850158	0.255867698505057	.	.	.	.
LUAD	CAediting_1299	chr1_1469610_+	0.000332686212023881	0.474363875022386	.	.	.	.
BLCA	CAediting_1300	chr1_1469611_+	2.53856791007241e-07	0.357341859980093	0.0111080476204927	0.180575722336513	.	.
BRCA	CAediting_1300	chr1_1469611_+	4.18799835632202e-28	0.42626193138764	.	.	.	.
LIHC	CAediting_1300	chr1_1469611_+	7.4458092997479e-07	0.597278363515607	.	.	.	.
CESC	CAediting_1300	chr1_1469611_+	8.36095232325897e-10	0.487994583499976	.	.	.	.
LUAD	CAediting_1300	chr1_1469611_+	8.26482907034519e-17	0.41365589323382	.	.	.	.
LUSC	CAediting_1300	chr1_1469611_+	0.000498516461053052	0.261220852839645	.	.	.	.
GBM	CAediting_1300	chr1_1469611_+	0.0499413786098388	0.268151818714614	.	.	.	.
HNSC	CAediting_1300	chr1_1469611_+	5.56344495523038e-05	0.405347432956214	.	.	.	.
THCA	CAediting_1300	chr1_1469611_+	3.2685689901326e-23	0.423025113343176	.	.	.	.
KIRC	CAediting_1300	chr1_1469611_+	8.86658932560521e-08	0.285074414185288	.	.	.	.
UCEC	CAediting_1300	chr1_1469611_+	0.00596059764006765	0.244670259301014	.	.	.	.
KIRP	CAediting_1300	chr1_1469611_+	0.00767282015431896	0.195976169463771	.	.	.	.
OV	CAediting_1300	chr1_1469611_+	6.41144122293807e-10	0.386159805986064	.	.	.	.
THYM	CAediting_1300	chr1_1469611_+	0.000135083648096339	0.367345569011947	.	.	.	.
BLCA	CAediting_1310	chr1_1469737_+	.	.	0.00126926364931748	0.439020285096254	.	.
BRCA	CAediting_1310	chr1_1469737_+	1.63811059257992e-05	0.232720351130765	.	.	.	.
LUAD	CAediting_1310	chr1_1469737_+	2.97997576200894e-06	0.411745056285531	.	.	.	.
THCA	CAediting_1310	chr1_1469737_+	0.033095358802625	0.287833701913636	.	.	.	.
UCEC	CAediting_1310	chr1_1469737_+	.	.	0.0170780221521492	0.301936668203613	.	.
OV	CAediting_1310	chr1_1469737_+	0.00929776095869902	0.243682206667506	.	.	.	.

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Relation with cancer stages for ATAD3C

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_1310	chr1_1469737_+	0.00281608516551661	0.335957009226855
THCA	pathologic_stage	CAediting_1300	chr1_1469611_+	0.0396117934482152	0.0924321331220302

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Relation with survival for ATAD3C

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_1300	chr1_1469611_+	0.0186074058663115	0.0258167	0.047984
LUSC	CAediting_1300	chr1_1469611_+	0.00830433509195638	0.0077288	0.100295

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RelatedDrugs for ATAD3C

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ATAD3C

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene