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Editing gene: ETFA (CAeditome ID:2108)

Gene summary for ETFA

Gene summary

Gene information	Gene symbol	ETFA
	Gene ID	2108
	Gene name	electron transfer flavoprotein subunit alpha
	Synonyms	EMA\|GA2\|MADD
	Cytomap	15q24.2-q24.3
	Type of gene	protein-coding
	Description	electron transfer flavoprotein subunit alpha, mitochondrialalpha-ETFelectron transfer flavoprotein alpha subunitelectron transfer flavoprotein, alpha polypeptideepididymis secretory sperm binding proteinglutaric aciduria II
	Modification date	20210518
	UniProtAcc	P13804
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ETFA	GO:0009055	Electron transfer flavoprotein subunit alpha, mitochondrial	10423253
ETFA	GO:0009055	Electron transfer flavoprotein subunit alpha, mitochondrial	25416781
ETFA	GO:0016491	Electron transfer flavoprotein subunit alpha, mitochondrial	10423253
ETFA	GO:0016491	Electron transfer flavoprotein subunit alpha, mitochondrial	9334218
ETFA	GO:0050660	Electron transfer flavoprotein subunit alpha, mitochondrial	10423253
ETFA	GO:0050660	Electron transfer flavoprotein subunit alpha, mitochondrial	9334218
ETFA	GO:0033539	Electron transfer flavoprotein subunit alpha, mitochondrial	25416781
ETFA	GO:0005739	Electron transfer flavoprotein subunit alpha, mitochondrial	0000052

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RNA A-to-I events for ETFA

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000140374.14

RNA A-to-I editing events in Cancer.

CAediting_1063271(76230018, -), CAediting_1063272(76230026, -), CAediting_1063273(76230040, -), CAediting_1063274(76230048, -), CAediting_1063275(76230066, -), CAediting_1063276(76230085, -), CAediting_1063277(76230091, -), CAediting_1063278(76230122, -), CAediting_1063279(76230137, -), CAediting_1063280(76230158, -), CAediting_1063281(76230162, -), CAediting_1063282(76230175, -), CAediting_1063283(76230179, -), CAediting_1063284(76230183, -), CAediting_1063285(76230525, -), CAediting_1063286(76230544, -), CAediting_1063287(76230545, -), CAediting_1063288(76230553, -), CAediting_1063289(76230559, -), CAediting_1063290(76230612, -), CAediting_1063291(76233468, -), CAediting_1063292(76233474, -), CAediting_1063293(76243037, -), CAediting_1063294(76243067, -), CAediting_1063295(76243127, -), CAediting_1063296(76243173, -), CAediting_1063297(76244073, -), CAediting_1063298(76244122, -), CAediting_1063299(76248831, -), CAediting_1063300(76248871, -), CAediting_1063301(76249240, -), CAediting_1063302(76250630, -), CAediting_1063303(76250635, -), CAediting_1063304(76250657, -), CAediting_1063305(76250671, -), CAediting_1063306(76270910, -), CAediting_1063307(76270985, -), CAediting_1063308(76271025, -), CAediting_1063309(76271070, -), CAediting_1063310(76271086, -), CAediting_1063311(76272297, -), CAediting_1063312(76272317, -), CAediting_1063313(76272318, -), CAediting_1063314(76272335, -), CAediting_1063315(76281977, -), CAediting_1063316(76284368, -), CAediting_1063317(76284380, -), CAediting_1063318(76284381, -), CAediting_1063319(76284382, -), CAediting_1063320(76284408, -), CAediting_1063321(76284419, -), CAediting_1063322(76284455, -), CAediting_1063323(76284685, -), CAediting_1063324(76284830, -), CAediting_1063325(76284848, -), CAediting_1063326(76284854, -), CAediting_1063327(76284873, -), CAediting_1063328(76284883, -), CAediting_1063329(76284884, -), CAediting_1063330(76284886, -), CAediting_1063331(76284904, -), CAediting_1063332(76288606, -), CAediting_1063333(76288929, -), CAediting_1063334(76288957, -), CAediting_1063335(76288971, -), CAediting_1063336(76288992, -), CAediting_1063337(76288998, -), CAediting_1063338(76289003, -), CAediting_1063339(76289012, -), CAediting_1063340(76289017, -), CAediting_1063341(76289036, -), CAediting_1063342(76289044, -), CAediting_1063343(76289048, -), CAediting_1063344(76289058, -), CAediting_1063345(76289071, -), CAediting_1063346(76289157, -), CAediting_1063347(76289171, -), CAediting_1063348(76290405, -), CAediting_1063349(76290407, -), CAediting_1063350(76290412, -), CAediting_1063351(76290417, -), CAediting_1063352(76290442, -), CAediting_1063353(76290450, -), CAediting_1063354(76290460, -), CAediting_1063355(76290477, -), CAediting_1063356(76290513, -), CAediting_1063357(76290528, -), CAediting_1063358(76290533, -), CAediting_1063359(76290550, -), CAediting_1063360(76290569, -), CAediting_1063361(76290610, -), CAediting_1063362(76290965, -), CAediting_1063363(76291100, -), CAediting_1063364(76291132, -), CAediting_1063365(76291275, -), CAediting_1063366(76291399, -), CAediting_1063367(76291401, -), CAediting_1063368(76296042, -), CAediting_1063369(76296043, -), CAediting_1063370(76296070, -), CAediting_1063371(76296084, -), CAediting_1063372(76296109, -), CAediting_1063373(76296143, -), CAediting_1063374(76296153, -), CAediting_1063375(76296154, -), CAediting_1063376(76296182, -), CAediting_1063377(76296242, -), CAediting_1063378(76299366, -), CAediting_1063379(76301454, -), CAediting_1063380(76302940, -), CAediting_1063381(76304489, -), CAediting_1063382(76304855, -), CAediting_1063383(76306405, -), CAediting_1063384(76306445, -), CAediting_1063385(76306469, -), CAediting_1063386(76309957, -), CAediting_1063387(76309975, -), CAediting_1063388(76310014, -), CAediting_1063389(76310027, -), CAediting_1063390(76310044, -),

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RNA editing positional annotations for ETFA using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1063327	chr15_76284873_-	nonsynonymous SNV	ENST00000559386.1	c.A719G	p.H240R	D	.	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1063271	chr15_76230018_-	intronic
CAediting_1063272	chr15_76230026_-	intronic
CAediting_1063273	chr15_76230040_-	intronic
CAediting_1063274	chr15_76230048_-	ncRNA_exonic
CAediting_1063275	chr15_76230066_-	ncRNA_exonic
CAediting_1063276	chr15_76230085_-	ncRNA_exonic
CAediting_1063277	chr15_76230091_-	ncRNA_exonic
CAediting_1063278	chr15_76230122_-	ncRNA_exonic
CAediting_1063279	chr15_76230137_-	ncRNA_exonic
CAediting_1063280	chr15_76230158_-	ncRNA_exonic
CAediting_1063281	chr15_76230162_-	ncRNA_exonic
CAediting_1063282	chr15_76230175_-	ncRNA_exonic
CAediting_1063283	chr15_76230179_-	ncRNA_exonic
CAediting_1063284	chr15_76230183_-	ncRNA_exonic
CAediting_1063285	chr15_76230525_-	ncRNA_exonic
CAediting_1063286	chr15_76230544_-	ncRNA_exonic
CAediting_1063287	chr15_76230545_-	ncRNA_exonic
CAediting_1063288	chr15_76230553_-	ncRNA_exonic
CAediting_1063289	chr15_76230559_-	ncRNA_exonic
CAediting_1063290	chr15_76230612_-	ncRNA_exonic
CAediting_1063291	chr15_76233468_-	ncRNA_intronic
CAediting_1063292	chr15_76233474_-	ncRNA_intronic
CAediting_1063293	chr15_76243037_-	ncRNA_intronic
CAediting_1063294	chr15_76243067_-	ncRNA_intronic
CAediting_1063295	chr15_76243127_-	ncRNA_intronic
CAediting_1063296	chr15_76243173_-	ncRNA_intronic
CAediting_1063297	chr15_76244073_-	ncRNA_intronic
CAediting_1063298	chr15_76244122_-	ncRNA_intronic
CAediting_1063299	chr15_76248831_-	ncRNA_intronic
CAediting_1063300	chr15_76248871_-	ncRNA_intronic
CAediting_1063301	chr15_76249240_-	ncRNA_intronic
CAediting_1063302	chr15_76250630_-	ncRNA_intronic
CAediting_1063303	chr15_76250635_-	ncRNA_intronic
CAediting_1063304	chr15_76250657_-	ncRNA_intronic
CAediting_1063305	chr15_76250671_-	ncRNA_intronic
CAediting_1063306	chr15_76270910_-	ncRNA_intronic
CAediting_1063307	chr15_76270985_-	ncRNA_intronic
CAediting_1063308	chr15_76271025_-	ncRNA_intronic
CAediting_1063309	chr15_76271070_-	ncRNA_intronic
CAediting_1063310	chr15_76271086_-	ncRNA_intronic
CAediting_1063311	chr15_76272297_-	ncRNA_intronic
CAediting_1063312	chr15_76272317_-	ncRNA_intronic
CAediting_1063313	chr15_76272318_-	ncRNA_intronic
CAediting_1063314	chr15_76272335_-	ncRNA_intronic
CAediting_1063315	chr15_76281977_-	ncRNA_intronic
CAediting_1063316	chr15_76284368_-	exonic
CAediting_1063317	chr15_76284380_-	exonic
CAediting_1063318	chr15_76284381_-	exonic
CAediting_1063319	chr15_76284382_-	exonic
CAediting_1063320	chr15_76284408_-	exonic
CAediting_1063321	chr15_76284419_-	exonic
CAediting_1063322	chr15_76284455_-	exonic
CAediting_1063323	chr15_76284685_-	ncRNA_intronic
CAediting_1063324	chr15_76284830_-	exonic
CAediting_1063325	chr15_76284848_-	exonic
CAediting_1063326	chr15_76284854_-	exonic
CAediting_1063327	chr15_76284873_-	exonic
CAediting_1063328	chr15_76284883_-	exonic
CAediting_1063329	chr15_76284884_-	exonic
CAediting_1063330	chr15_76284886_-	exonic
CAediting_1063331	chr15_76284904_-	exonic
CAediting_1063332	chr15_76288606_-	ncRNA_intronic
CAediting_1063333	chr15_76288929_-	ncRNA_intronic
CAediting_1063334	chr15_76288957_-	ncRNA_intronic
CAediting_1063335	chr15_76288971_-	ncRNA_intronic
CAediting_1063336	chr15_76288992_-	ncRNA_intronic
CAediting_1063337	chr15_76288998_-	ncRNA_intronic
CAediting_1063338	chr15_76289003_-	ncRNA_intronic
CAediting_1063339	chr15_76289012_-	ncRNA_intronic
CAediting_1063340	chr15_76289017_-	ncRNA_intronic
CAediting_1063341	chr15_76289036_-	ncRNA_intronic
CAediting_1063342	chr15_76289044_-	ncRNA_intronic
CAediting_1063343	chr15_76289048_-	ncRNA_intronic
CAediting_1063344	chr15_76289058_-	ncRNA_intronic
CAediting_1063345	chr15_76289071_-	ncRNA_intronic
CAediting_1063346	chr15_76289157_-	ncRNA_intronic
CAediting_1063347	chr15_76289171_-	ncRNA_intronic
CAediting_1063348	chr15_76290405_-	ncRNA_intronic
CAediting_1063349	chr15_76290407_-	ncRNA_intronic
CAediting_1063350	chr15_76290412_-	ncRNA_intronic
CAediting_1063351	chr15_76290417_-	ncRNA_intronic
CAediting_1063352	chr15_76290442_-	ncRNA_intronic
CAediting_1063353	chr15_76290450_-	ncRNA_intronic
CAediting_1063354	chr15_76290460_-	ncRNA_intronic
CAediting_1063355	chr15_76290477_-	ncRNA_intronic
CAediting_1063356	chr15_76290513_-	ncRNA_intronic
CAediting_1063357	chr15_76290528_-	ncRNA_intronic
CAediting_1063358	chr15_76290533_-	ncRNA_intronic
CAediting_1063359	chr15_76290550_-	ncRNA_intronic
CAediting_1063360	chr15_76290569_-	ncRNA_intronic
CAediting_1063361	chr15_76290610_-	ncRNA_intronic
CAediting_1063362	chr15_76290965_-	ncRNA_intronic
CAediting_1063363	chr15_76291100_-	ncRNA_intronic
CAediting_1063364	chr15_76291132_-	ncRNA_intronic
CAediting_1063365	chr15_76291275_-	ncRNA_intronic
CAediting_1063366	chr15_76291399_-	ncRNA_intronic
CAediting_1063367	chr15_76291401_-	ncRNA_intronic
CAediting_1063368	chr15_76296042_-	ncRNA_intronic
CAediting_1063369	chr15_76296043_-	ncRNA_intronic
CAediting_1063370	chr15_76296070_-	ncRNA_intronic
CAediting_1063371	chr15_76296084_-	ncRNA_intronic
CAediting_1063372	chr15_76296109_-	ncRNA_intronic
CAediting_1063373	chr15_76296143_-	ncRNA_intronic
CAediting_1063374	chr15_76296153_-	ncRNA_intronic
CAediting_1063375	chr15_76296154_-	ncRNA_intronic
CAediting_1063376	chr15_76296182_-	ncRNA_intronic
CAediting_1063377	chr15_76296242_-	ncRNA_intronic
CAediting_1063378	chr15_76299366_-	ncRNA_intronic
CAediting_1063379	chr15_76301454_-	ncRNA_intronic
CAediting_1063380	chr15_76302940_-	ncRNA_intronic
CAediting_1063381	chr15_76304489_-	ncRNA_intronic
CAediting_1063382	chr15_76304855_-	ncRNA_intronic
CAediting_1063383	chr15_76306405_-	ncRNA_intronic
CAediting_1063384	chr15_76306445_-	ncRNA_intronic
CAediting_1063385	chr15_76306469_-	ncRNA_intronic
CAediting_1063386	chr15_76309957_-	ncRNA_intronic
CAediting_1063387	chr15_76309975_-	exonic
CAediting_1063388	chr15_76310014_-	exonic
CAediting_1063389	chr15_76310027_-	exonic
CAediting_1063390	chr15_76310044_-	exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1063271	chr15_76230018_-	SINE	Alu	AluYc
CAediting_1063272	chr15_76230026_-	SINE	Alu	AluYc
CAediting_1063273	chr15_76230040_-	SINE	Alu	AluYc
CAediting_1063274	chr15_76230048_-	SINE	Alu	AluYc
CAediting_1063275	chr15_76230066_-	SINE	Alu	AluYc
CAediting_1063276	chr15_76230085_-	SINE	Alu	AluYc
CAediting_1063277	chr15_76230091_-	SINE	Alu	AluYc
CAediting_1063278	chr15_76230122_-	SINE	Alu	AluYc
CAediting_1063279	chr15_76230137_-	SINE	Alu	AluYc
CAediting_1063280	chr15_76230158_-	SINE	Alu	AluYc
CAediting_1063281	chr15_76230162_-	SINE	Alu	AluYc
CAediting_1063282	chr15_76230175_-	SINE	Alu	AluYc
CAediting_1063283	chr15_76230179_-	SINE	Alu	AluYc
CAediting_1063284	chr15_76230183_-	SINE	Alu	AluYc
CAediting_1063285	chr15_76230525_-	SINE	Alu	AluY
CAediting_1063286	chr15_76230544_-	SINE	Alu	AluY
CAediting_1063287	chr15_76230545_-	SINE	Alu	AluY
CAediting_1063288	chr15_76230553_-	SINE	Alu	AluY
CAediting_1063289	chr15_76230559_-	SINE	Alu	AluY
CAediting_1063290	chr15_76230612_-	SINE	Alu	AluY
CAediting_1063291	chr15_76233468_-	SINE	Alu	AluSg
CAediting_1063292	chr15_76233474_-	SINE	Alu	AluSg
CAediting_1063293	chr15_76243037_-	SINE	Alu	AluSz
CAediting_1063294	chr15_76243067_-	SINE	Alu	AluSz
CAediting_1063295	chr15_76243127_-	SINE	Alu	AluSz
CAediting_1063296	chr15_76243173_-	SINE	Alu	AluSz
CAediting_1063297	chr15_76244073_-	SINE	Alu	AluSp
CAediting_1063298	chr15_76244122_-	SINE	Alu	AluSp
CAediting_1063299	chr15_76248831_-	SINE	Alu	AluSx1
CAediting_1063300	chr15_76248871_-	SINE	Alu	AluSx1
CAediting_1063301	chr15_76249240_-	SINE	Alu	AluSp
CAediting_1063302	chr15_76250630_-	SINE	Alu	AluJo
CAediting_1063303	chr15_76250635_-	SINE	Alu	AluJo
CAediting_1063304	chr15_76250657_-	SINE	Alu	AluJo
CAediting_1063305	chr15_76250671_-	SINE	Alu	AluJo
CAediting_1063306	chr15_76270910_-	SINE	Alu	AluSz6
CAediting_1063307	chr15_76270985_-	SINE	Alu	AluSz6
CAediting_1063308	chr15_76271025_-	SINE	Alu	AluSz6
CAediting_1063309	chr15_76271070_-	SINE	Alu	AluSz6
CAediting_1063310	chr15_76271086_-	SINE	Alu	AluSz6
CAediting_1063311	chr15_76272297_-	SINE	Alu	AluSc8
CAediting_1063312	chr15_76272317_-	SINE	Alu	AluSc8
CAediting_1063313	chr15_76272318_-	SINE	Alu	AluSc8
CAediting_1063314	chr15_76272335_-	SINE	Alu	AluSc8
CAediting_1063315	chr15_76281977_-	SINE	Alu	AluSx
CAediting_1063316	chr15_76284368_-	SINE	Alu	AluSp
CAediting_1063317	chr15_76284380_-	SINE	Alu	AluSp
CAediting_1063318	chr15_76284381_-	SINE	Alu	AluSp
CAediting_1063319	chr15_76284382_-	SINE	Alu	AluSp
CAediting_1063320	chr15_76284408_-	SINE	Alu	AluSp
CAediting_1063321	chr15_76284419_-	SINE	Alu	AluSp
CAediting_1063322	chr15_76284455_-	SINE	Alu	AluSp
CAediting_1063323	chr15_76284685_-	SINE	Alu	AluSq2
CAediting_1063324	chr15_76284830_-	SINE	Alu	AluSp
CAediting_1063325	chr15_76284848_-	SINE	Alu	AluSp
CAediting_1063326	chr15_76284854_-	SINE	Alu	AluSp
CAediting_1063327	chr15_76284873_-	SINE	Alu	AluSp
CAediting_1063328	chr15_76284883_-	SINE	Alu	AluSp
CAediting_1063329	chr15_76284884_-	SINE	Alu	AluSp
CAediting_1063330	chr15_76284886_-	SINE	Alu	AluSp
CAediting_1063331	chr15_76284904_-	SINE	Alu	AluSp
CAediting_1063332	chr15_76288606_-	SINE	Alu	AluSx3
CAediting_1063333	chr15_76288929_-	SINE	Alu	AluJr4
CAediting_1063334	chr15_76288957_-	SINE	Alu	AluJr4
CAediting_1063335	chr15_76288971_-	SINE	Alu	AluJr4
CAediting_1063336	chr15_76288992_-	SINE	Alu	AluJr4
CAediting_1063337	chr15_76288998_-	SINE	Alu	AluJr4
CAediting_1063338	chr15_76289003_-	SINE	Alu	AluJr4
CAediting_1063339	chr15_76289012_-	SINE	Alu	AluJr4
CAediting_1063340	chr15_76289017_-	SINE	Alu	AluJr4
CAediting_1063341	chr15_76289036_-	SINE	Alu	AluJr4
CAediting_1063342	chr15_76289044_-	SINE	Alu	AluJr4
CAediting_1063343	chr15_76289048_-	SINE	Alu	AluJr4
CAediting_1063344	chr15_76289058_-	SINE	Alu	AluJr4
CAediting_1063345	chr15_76289071_-	SINE	Alu	AluJr4
CAediting_1063346	chr15_76289157_-	SINE	Alu	AluJr4
CAediting_1063347	chr15_76289171_-	SINE	Alu	AluJr4
CAediting_1063348	chr15_76290405_-	SINE	Alu	AluJb
CAediting_1063349	chr15_76290407_-	SINE	Alu	AluJb
CAediting_1063350	chr15_76290412_-	SINE	Alu	AluJb
CAediting_1063351	chr15_76290417_-	SINE	Alu	AluJb
CAediting_1063352	chr15_76290442_-	SINE	Alu	AluJb
CAediting_1063353	chr15_76290450_-	SINE	Alu	AluJb
CAediting_1063354	chr15_76290460_-	SINE	Alu	AluJb
CAediting_1063355	chr15_76290477_-	SINE	Alu	AluJb
CAediting_1063356	chr15_76290513_-	SINE	Alu	AluJb
CAediting_1063357	chr15_76290528_-	SINE	Alu	AluJb
CAediting_1063358	chr15_76290533_-	SINE	Alu	AluJb
CAediting_1063359	chr15_76290550_-	SINE	Alu	AluJb
CAediting_1063360	chr15_76290569_-	SINE	Alu	AluJb
CAediting_1063361	chr15_76290610_-	SINE	Alu	AluJb
CAediting_1063362	chr15_76290965_-	SINE	Alu	AluJr4
CAediting_1063363	chr15_76291100_-	SINE	Alu	AluJr4
CAediting_1063364	chr15_76291132_-	SINE	Alu	AluJr4
CAediting_1063365	chr15_76291275_-	SINE	Alu	AluSx
CAediting_1063366	chr15_76291399_-	SINE	Alu	AluSx
CAediting_1063367	chr15_76291401_-	SINE	Alu	AluSx
CAediting_1063368	chr15_76296042_-	SINE	Alu	AluY
CAediting_1063369	chr15_76296043_-	SINE	Alu	AluY
CAediting_1063370	chr15_76296070_-	SINE	Alu	AluY
CAediting_1063371	chr15_76296084_-	SINE	Alu	AluY
CAediting_1063372	chr15_76296109_-	SINE	Alu	AluY
CAediting_1063373	chr15_76296143_-	SINE	Alu	AluY
CAediting_1063374	chr15_76296153_-	SINE	Alu	AluY
CAediting_1063375	chr15_76296154_-	SINE	Alu	AluY
CAediting_1063376	chr15_76296182_-	SINE	Alu	AluY
CAediting_1063377	chr15_76296242_-	SINE	Alu	AluY
CAediting_1063378	chr15_76299366_-	SINE	Alu	AluJo
CAediting_1063379	chr15_76301454_-	SINE	Alu	AluSx
CAediting_1063380	chr15_76302940_-	SINE	Alu	FLAM_A
CAediting_1063381	chr15_76304489_-	SINE	Alu	AluJr
CAediting_1063382	chr15_76304855_-	SINE	Alu	AluYe5
CAediting_1063383	chr15_76306405_-	SINE	Alu	AluSg
CAediting_1063384	chr15_76306445_-	SINE	Alu	AluSg
CAediting_1063385	chr15_76306469_-	SINE	Alu	AluSg
CAediting_1063386	chr15_76309957_-	SINE	Alu	AluSz
CAediting_1063387	chr15_76309975_-	SINE	Alu	AluSz
CAediting_1063388	chr15_76310014_-	SINE	Alu	AluSz
CAediting_1063389	chr15_76310027_-	SINE	Alu	AluSz
CAediting_1063390	chr15_76310044_-	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for ETFA

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1063322	chr15_76284455_-	76284455:76284477	3SS	3+0i	TAATTTTGTATTTTTAGTAGAGA	1.87	TAATTTTGTATTTTTAGTAGAGG	1.58
MEX_1	CAediting_1063322	chr15_76284455_-	76284455:76284477	3SS	3+0i	TAATTTTGTATTTTTAGTAGAGA	1.87	TAATTTTGTATTTTTAGTAGAGG	1.58
ES	CAediting_1063325	chr15_76284848_-	76284846:76284854	5SS	0+4i	AGGTTCAAG	-12.66	AGGTTCGAG	-17.82
MEX_2	CAediting_1063325	chr15_76284848_-	76284846:76284854	5SS	0+4i	AGGTTCAAG	-12.66	AGGTTCGAG	-17.82
ES	CAediting_1063326	chr15_76284854_-	76284846:76284854	5SS	3+0i	AGGTTCAAG	-12.66	GGGTTCAAG	-15.39
MEX_2	CAediting_1063326	chr15_76284854_-	76284846:76284854	5SS	3+0i	AGGTTCAAG	-12.66	GGGTTCAAG	-15.39

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000140374.14.ETFA.

Correlation between RNA A-to-I editing and PSI for ENSG00000140374.14.ETFA.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ETFA

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ETFA

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ETFA

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000140374.14	ENST00000267950	hsa-miR-548aa	76274460	76274466	7mer-m8	76274459	76274484	158	-15.43
CAediting_1229415	chr17_67471547_+	ENSG00000140374.14	ENST00000560044	hsa-miR-548aa	76274460	76274466	7mer-m8	76274459	76274484	158	-15.43

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_228905	chr2_188297554_+	ENSG00000140374.14	ENST00000433983	hsa-miR-561-3p	76216529	76216535	7mer-m8	76216528	76216549	140	-4.62
CAediting_228905	chr2_188297554_+	ENSG00000140374.14	ENST00000267950	hsa-miR-561-3p	76216529	76216535	7mer-m8	76216528	76216549	140	-4.62
CAediting_228905	chr2_188297554_+	ENSG00000140374.14	ENST00000565910	hsa-miR-561-3p	76216529	76216535	7mer-m8	76216528	76216549	140	-4.62

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ETFA

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ETFA

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for ETFA

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ETFA

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ETFA

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ETFA

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ETFA	C0268596	Multiple Acyl Coenzyme A Dehydrogenase Deficiency	11	CLINGEN;CTD_human;GENOMICS_ENGLAND;UNIPROT
ETFA	C0029408	Degenerative polyarthritis	1	CTD_human
ETFA	C0086743	Osteoarthrosis Deformans	1	CTD_human
ETFA	C0369183	Erythrocyte Mean Corpuscular Hemoglobin Test	1	GENOMICS_ENGLAND
ETFA	C1261502	Finding of Mean Corpuscular Hemoglobin	1	GENOMICS_ENGLAND
ETFA	C2239176	Liver carcinoma	1	CTD_human
ETFA	C3278154	GLUTARIC ACIDEMIA IIA	1	GENOMICS_ENGLAND
ETFA	C4317009	Diverticular Diseases	1	CTD_human
ETFA	C4505353	Diverticular Bleeding	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene