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Editing gene: ERV3-1 (CAeditome ID:2086)

Gene summary for ERV3-1

Gene summary

Gene information	Gene symbol	ERV3-1
	Gene ID	2086
	Gene name	endogenous retrovirus group 3 member 1, envelope
	Synonyms	ERV-R\|ERV3\|ERVR\|HERV-R\|HERVR\|envR
	Cytomap	7q11.21
	Type of gene	protein-coding
	Description	endogenous retrovirus group 3 member 1 Env polyproteinERV-R envelope proteinERV3-1 envelope proteinHERV-R envelope proteinHERV-R_7q21.2 provirus ancestral Env polyproteinendogenous retroviral sequence 3endogenous retrovirus group 3, member 1
	Modification date	20210518
	UniProtAcc	Q14264
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ERV3-1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000213462.4

RNA A-to-I editing events in Cancer.

CAediting_548481(65000221, -), CAediting_548482(65000245, -), CAediting_548483(65000252, -), CAediting_548484(65000275, -), CAediting_548485(65000292, -), CAediting_548486(65000315, -), CAediting_548487(65000319, -), CAediting_548488(65000334, -), CAediting_548489(65000351, -), CAediting_548490(65000355, -), CAediting_548491(65000361, -), CAediting_548492(65000406, -), CAediting_548493(65000426, -), CAediting_548494(65000428, -), CAediting_548495(65000443, -), CAediting_548496(65000452, -), CAediting_548497(65000457, -), CAediting_548498(65000487, -), CAediting_548499(65000490, -), CAediting_548500(65000496, -), CAediting_548501(65000534, -), CAediting_548502(65000553, -), CAediting_548503(65000558, -), CAediting_548504(65000574, -), CAediting_548505(65000576, -), CAediting_548506(65000596, -), CAediting_548507(65000611, -), CAediting_548508(65000613, -), CAediting_548509(65000636, -), CAediting_548510(65000637, -), CAediting_548511(65000653, -), CAediting_548512(65000661, -), CAediting_548513(65000666, -), CAediting_548514(65000685, -), CAediting_548515(65000690, -), CAediting_548516(65000698, -), CAediting_548517(65000701, -), CAediting_548518(65000702, -), CAediting_548519(65000723, -), CAediting_548520(65000749, -), CAediting_548521(65000753, -), CAediting_548522(65000763, -), CAediting_548523(65000771, -), CAediting_548524(65000779, -), CAediting_548525(65002346, -), CAediting_548526(65002378, -), CAediting_548527(65002391, -), CAediting_548528(65002409, -), CAediting_548529(65002413, -), CAediting_548530(65002420, -), CAediting_548531(65002421, -), CAediting_548532(65002429, -), CAediting_548533(65002435, -), CAediting_548534(65002439, -), CAediting_548535(65002452, -), CAediting_548536(65002461, -), CAediting_548537(65002480, -), CAediting_548538(65002488, -), CAediting_548539(65002494, -), CAediting_548540(65002497, -), CAediting_548541(65002499, -), CAediting_548542(65002521, -), CAediting_548543(65002531, -), CAediting_548544(65002532, -), CAediting_548545(65002541, -), CAediting_548546(65002560, -), CAediting_548547(65002579, -), CAediting_548548(65002600, -), CAediting_548549(65002601, -), CAediting_548550(65002616, -), CAediting_548551(65002617, -), CAediting_548552(65003214, -), CAediting_548553(65003223, -), CAediting_548554(65003230, -), CAediting_548555(65003232, -), CAediting_548556(65003243, -), CAediting_548557(65003244, -), CAediting_548558(65003245, -), CAediting_548559(65003277, -), CAediting_548560(65003279, -), CAediting_548561(65003290, -), CAediting_548562(65003294, -), CAediting_548563(65003299, -), CAediting_548564(65003309, -), CAediting_548565(65003316, -), CAediting_548566(65003319, -), CAediting_548567(65003338, -), CAediting_548568(65003342, -), CAediting_548569(65003347, -), CAediting_548570(65003354, -), CAediting_548571(65003358, -), CAediting_548572(65003360, -), CAediting_548573(65003370, -), CAediting_548574(65003382, -), CAediting_548575(65003394, -), CAediting_548576(65003395, -), CAediting_548577(65003399, -), CAediting_548578(65003419, -), CAediting_548579(65003443, -), CAediting_548580(65004086, -), CAediting_548581(65004095, -), CAediting_548582(65004107, -), CAediting_548583(65004169, -), CAediting_548584(65004189, -), CAediting_548585(65004198, -), CAediting_548586(65004213, -), CAediting_548587(65004214, -), CAediting_548588(65004218, -), CAediting_548589(65004241, -), CAediting_548590(65004251, -), CAediting_548591(65004255, -), CAediting_548592(65004263, -), CAediting_548593(65004268, -), CAediting_548594(65004280, -), CAediting_548595(65004281, -), CAediting_548596(65004305, -), CAediting_548597(65004361, -),

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RNA editing positional annotations for ERV3-1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_548481	chr7_65000221_-	ncRNA_intronic
CAediting_548482	chr7_65000245_-	ncRNA_intronic
CAediting_548483	chr7_65000252_-	ncRNA_intronic
CAediting_548484	chr7_65000275_-	ncRNA_intronic
CAediting_548485	chr7_65000292_-	ncRNA_intronic
CAediting_548486	chr7_65000315_-	ncRNA_intronic
CAediting_548487	chr7_65000319_-	ncRNA_intronic
CAediting_548488	chr7_65000334_-	ncRNA_intronic
CAediting_548489	chr7_65000351_-	ncRNA_intronic
CAediting_548490	chr7_65000355_-	ncRNA_intronic
CAediting_548491	chr7_65000361_-	ncRNA_intronic
CAediting_548492	chr7_65000406_-	ncRNA_intronic
CAediting_548493	chr7_65000426_-	ncRNA_intronic
CAediting_548494	chr7_65000428_-	ncRNA_intronic
CAediting_548495	chr7_65000443_-	ncRNA_intronic
CAediting_548496	chr7_65000452_-	ncRNA_intronic
CAediting_548497	chr7_65000457_-	ncRNA_intronic
CAediting_548498	chr7_65000487_-	ncRNA_intronic
CAediting_548499	chr7_65000490_-	ncRNA_intronic
CAediting_548500	chr7_65000496_-	ncRNA_intronic
CAediting_548501	chr7_65000534_-	ncRNA_intronic
CAediting_548502	chr7_65000553_-	ncRNA_intronic
CAediting_548503	chr7_65000558_-	ncRNA_intronic
CAediting_548504	chr7_65000574_-	ncRNA_intronic
CAediting_548505	chr7_65000576_-	ncRNA_intronic
CAediting_548506	chr7_65000596_-	ncRNA_intronic
CAediting_548507	chr7_65000611_-	ncRNA_intronic
CAediting_548508	chr7_65000613_-	ncRNA_intronic
CAediting_548509	chr7_65000636_-	ncRNA_intronic
CAediting_548510	chr7_65000637_-	ncRNA_intronic
CAediting_548511	chr7_65000653_-	ncRNA_intronic
CAediting_548512	chr7_65000661_-	ncRNA_intronic
CAediting_548513	chr7_65000666_-	ncRNA_intronic
CAediting_548514	chr7_65000685_-	ncRNA_intronic
CAediting_548515	chr7_65000690_-	ncRNA_intronic
CAediting_548516	chr7_65000698_-	ncRNA_intronic
CAediting_548517	chr7_65000701_-	ncRNA_intronic
CAediting_548518	chr7_65000702_-	ncRNA_intronic
CAediting_548519	chr7_65000723_-	ncRNA_intronic
CAediting_548520	chr7_65000749_-	ncRNA_intronic
CAediting_548521	chr7_65000753_-	ncRNA_intronic
CAediting_548522	chr7_65000763_-	ncRNA_intronic
CAediting_548523	chr7_65000771_-	ncRNA_intronic
CAediting_548524	chr7_65000779_-	ncRNA_intronic
CAediting_548525	chr7_65002346_-	ncRNA_intronic
CAediting_548526	chr7_65002378_-	ncRNA_intronic
CAediting_548527	chr7_65002391_-	ncRNA_intronic
CAediting_548528	chr7_65002409_-	ncRNA_intronic
CAediting_548529	chr7_65002413_-	ncRNA_intronic
CAediting_548530	chr7_65002420_-	ncRNA_intronic
CAediting_548531	chr7_65002421_-	ncRNA_intronic
CAediting_548532	chr7_65002429_-	ncRNA_intronic
CAediting_548533	chr7_65002435_-	ncRNA_intronic
CAediting_548534	chr7_65002439_-	ncRNA_intronic
CAediting_548535	chr7_65002452_-	ncRNA_intronic
CAediting_548536	chr7_65002461_-	ncRNA_intronic
CAediting_548537	chr7_65002480_-	ncRNA_intronic
CAediting_548538	chr7_65002488_-	ncRNA_intronic
CAediting_548539	chr7_65002494_-	ncRNA_intronic
CAediting_548540	chr7_65002497_-	ncRNA_intronic
CAediting_548541	chr7_65002499_-	ncRNA_intronic
CAediting_548542	chr7_65002521_-	ncRNA_intronic
CAediting_548543	chr7_65002531_-	ncRNA_intronic
CAediting_548544	chr7_65002532_-	ncRNA_intronic
CAediting_548545	chr7_65002541_-	ncRNA_intronic
CAediting_548546	chr7_65002560_-	ncRNA_intronic
CAediting_548547	chr7_65002579_-	ncRNA_intronic
CAediting_548548	chr7_65002600_-	ncRNA_intronic
CAediting_548549	chr7_65002601_-	ncRNA_intronic
CAediting_548550	chr7_65002616_-	ncRNA_intronic
CAediting_548551	chr7_65002617_-	ncRNA_intronic
CAediting_548552	chr7_65003214_-	ncRNA_intronic
CAediting_548553	chr7_65003223_-	ncRNA_intronic
CAediting_548554	chr7_65003230_-	ncRNA_intronic
CAediting_548555	chr7_65003232_-	ncRNA_intronic
CAediting_548556	chr7_65003243_-	ncRNA_intronic
CAediting_548557	chr7_65003244_-	ncRNA_intronic
CAediting_548558	chr7_65003245_-	ncRNA_intronic
CAediting_548559	chr7_65003277_-	ncRNA_intronic
CAediting_548560	chr7_65003279_-	ncRNA_intronic
CAediting_548561	chr7_65003290_-	ncRNA_intronic
CAediting_548562	chr7_65003294_-	ncRNA_intronic
CAediting_548563	chr7_65003299_-	ncRNA_intronic
CAediting_548564	chr7_65003309_-	ncRNA_intronic
CAediting_548565	chr7_65003316_-	ncRNA_intronic
CAediting_548566	chr7_65003319_-	ncRNA_intronic
CAediting_548567	chr7_65003338_-	ncRNA_intronic
CAediting_548568	chr7_65003342_-	ncRNA_intronic
CAediting_548569	chr7_65003347_-	ncRNA_intronic
CAediting_548570	chr7_65003354_-	ncRNA_intronic
CAediting_548571	chr7_65003358_-	ncRNA_intronic
CAediting_548572	chr7_65003360_-	ncRNA_intronic
CAediting_548573	chr7_65003370_-	ncRNA_intronic
CAediting_548574	chr7_65003382_-	ncRNA_intronic
CAediting_548575	chr7_65003394_-	ncRNA_intronic
CAediting_548576	chr7_65003395_-	ncRNA_intronic
CAediting_548577	chr7_65003399_-	ncRNA_intronic
CAediting_548578	chr7_65003419_-	ncRNA_intronic
CAediting_548579	chr7_65003443_-	ncRNA_intronic
CAediting_548580	chr7_65004086_-	ncRNA_exonic
CAediting_548581	chr7_65004095_-	ncRNA_exonic
CAediting_548582	chr7_65004107_-	ncRNA_exonic
CAediting_548583	chr7_65004169_-	ncRNA_exonic
CAediting_548584	chr7_65004189_-	ncRNA_exonic
CAediting_548585	chr7_65004198_-	ncRNA_exonic
CAediting_548586	chr7_65004213_-	ncRNA_exonic
CAediting_548587	chr7_65004214_-	ncRNA_exonic
CAediting_548588	chr7_65004218_-	ncRNA_exonic
CAediting_548589	chr7_65004241_-	ncRNA_exonic
CAediting_548590	chr7_65004251_-	ncRNA_exonic
CAediting_548591	chr7_65004255_-	ncRNA_exonic
CAediting_548592	chr7_65004263_-	ncRNA_exonic
CAediting_548593	chr7_65004268_-	ncRNA_exonic
CAediting_548594	chr7_65004280_-	ncRNA_exonic
CAediting_548595	chr7_65004281_-	ncRNA_exonic
CAediting_548596	chr7_65004305_-	ncRNA_exonic
CAediting_548597	chr7_65004361_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_548481	chr7_65000221_-	SINE	Alu	AluY
CAediting_548482	chr7_65000245_-	SINE	Alu	AluY
CAediting_548483	chr7_65000252_-	SINE	Alu	AluY
CAediting_548484	chr7_65000275_-	SINE	Alu	AluY
CAediting_548485	chr7_65000292_-	SINE	Alu	AluY
CAediting_548486	chr7_65000315_-	SINE	Alu	AluY
CAediting_548487	chr7_65000319_-	SINE	Alu	AluY
CAediting_548488	chr7_65000334_-	SINE	Alu	AluY
CAediting_548489	chr7_65000351_-	SINE	Alu	AluY
CAediting_548490	chr7_65000355_-	SINE	Alu	AluY
CAediting_548491	chr7_65000361_-	SINE	Alu	AluY
CAediting_548492	chr7_65000406_-	SINE	Alu	AluY
CAediting_548493	chr7_65000426_-	SINE	Alu	AluY
CAediting_548494	chr7_65000428_-	SINE	Alu	AluY
CAediting_548495	chr7_65000443_-	SINE	Alu	AluY
CAediting_548496	chr7_65000452_-	SINE	Alu	AluY
CAediting_548497	chr7_65000457_-	SINE	Alu	AluY
CAediting_548498	chr7_65000487_-	SINE	Alu	AluY
CAediting_548499	chr7_65000490_-	SINE	Alu	AluY
CAediting_548500	chr7_65000496_-	SINE	Alu	AluY
CAediting_548501	chr7_65000534_-	SINE	Alu	AluJb
CAediting_548502	chr7_65000553_-	SINE	Alu	AluJb
CAediting_548503	chr7_65000558_-	SINE	Alu	AluJb
CAediting_548504	chr7_65000574_-	SINE	Alu	AluJb
CAediting_548505	chr7_65000576_-	SINE	Alu	AluJb
CAediting_548506	chr7_65000596_-	SINE	Alu	AluJb
CAediting_548507	chr7_65000611_-	SINE	Alu	AluJb
CAediting_548508	chr7_65000613_-	SINE	Alu	AluJb
CAediting_548509	chr7_65000636_-	SINE	Alu	AluJb
CAediting_548510	chr7_65000637_-	SINE	Alu	AluJb
CAediting_548511	chr7_65000653_-	SINE	Alu	AluJb
CAediting_548512	chr7_65000661_-	SINE	Alu	AluJb
CAediting_548513	chr7_65000666_-	SINE	Alu	AluJb
CAediting_548514	chr7_65000685_-	SINE	Alu	AluJb
CAediting_548515	chr7_65000690_-	SINE	Alu	AluJb
CAediting_548516	chr7_65000698_-	SINE	Alu	AluJb
CAediting_548517	chr7_65000701_-	SINE	Alu	AluJb
CAediting_548518	chr7_65000702_-	SINE	Alu	AluJb
CAediting_548519	chr7_65000723_-	SINE	Alu	AluJb
CAediting_548520	chr7_65000749_-	SINE	Alu	AluJb
CAediting_548521	chr7_65000753_-	SINE	Alu	AluJb
CAediting_548522	chr7_65000763_-	SINE	Alu	AluJb
CAediting_548523	chr7_65000771_-	SINE	Alu	AluJb
CAediting_548524	chr7_65000779_-	SINE	Alu	AluJb
CAediting_548525	chr7_65002346_-	SINE	Alu	AluSz
CAediting_548526	chr7_65002378_-	SINE	Alu	AluSz
CAediting_548527	chr7_65002391_-	SINE	Alu	AluSz
CAediting_548528	chr7_65002409_-	SINE	Alu	AluSz
CAediting_548529	chr7_65002413_-	SINE	Alu	AluSz
CAediting_548530	chr7_65002420_-	SINE	Alu	AluSz
CAediting_548531	chr7_65002421_-	SINE	Alu	AluSz
CAediting_548532	chr7_65002429_-	SINE	Alu	AluSz
CAediting_548533	chr7_65002435_-	SINE	Alu	AluSz
CAediting_548534	chr7_65002439_-	SINE	Alu	AluSz
CAediting_548535	chr7_65002452_-	SINE	Alu	AluSz
CAediting_548536	chr7_65002461_-	SINE	Alu	AluSz
CAediting_548537	chr7_65002480_-	SINE	Alu	AluSz
CAediting_548538	chr7_65002488_-	SINE	Alu	AluSz
CAediting_548539	chr7_65002494_-	SINE	Alu	AluSz
CAediting_548540	chr7_65002497_-	SINE	Alu	AluSz
CAediting_548541	chr7_65002499_-	SINE	Alu	AluSz
CAediting_548542	chr7_65002521_-	SINE	Alu	AluSz
CAediting_548543	chr7_65002531_-	SINE	Alu	AluSz
CAediting_548544	chr7_65002532_-	SINE	Alu	AluSz
CAediting_548545	chr7_65002541_-	SINE	Alu	AluSz
CAediting_548546	chr7_65002560_-	SINE	Alu	AluSz
CAediting_548547	chr7_65002579_-	SINE	Alu	AluSz
CAediting_548548	chr7_65002600_-	SINE	Alu	AluSz
CAediting_548549	chr7_65002601_-	SINE	Alu	AluSz
CAediting_548550	chr7_65002616_-	SINE	Alu	AluSz
CAediting_548551	chr7_65002617_-	SINE	Alu	AluSz
CAediting_548552	chr7_65003214_-	SINE	Alu	AluSx
CAediting_548553	chr7_65003223_-	SINE	Alu	AluSx
CAediting_548554	chr7_65003230_-	SINE	Alu	AluSx
CAediting_548555	chr7_65003232_-	SINE	Alu	AluSx
CAediting_548556	chr7_65003243_-	SINE	Alu	AluSx
CAediting_548557	chr7_65003244_-	SINE	Alu	AluSx
CAediting_548558	chr7_65003245_-	SINE	Alu	AluSx
CAediting_548559	chr7_65003277_-	SINE	Alu	AluSx
CAediting_548560	chr7_65003279_-	SINE	Alu	AluSx
CAediting_548561	chr7_65003290_-	SINE	Alu	AluSx
CAediting_548562	chr7_65003294_-	SINE	Alu	AluSx
CAediting_548563	chr7_65003299_-	SINE	Alu	AluSx
CAediting_548564	chr7_65003309_-	SINE	Alu	AluSx
CAediting_548565	chr7_65003316_-	SINE	Alu	AluSx
CAediting_548566	chr7_65003319_-	SINE	Alu	AluSx
CAediting_548567	chr7_65003338_-	SINE	Alu	AluSx
CAediting_548568	chr7_65003342_-	SINE	Alu	AluSx
CAediting_548569	chr7_65003347_-	SINE	Alu	AluSx
CAediting_548570	chr7_65003354_-	SINE	Alu	AluSx
CAediting_548571	chr7_65003358_-	SINE	Alu	AluSx
CAediting_548572	chr7_65003360_-	SINE	Alu	AluSx
CAediting_548573	chr7_65003370_-	SINE	Alu	AluSx
CAediting_548574	chr7_65003382_-	SINE	Alu	AluSx
CAediting_548575	chr7_65003394_-	SINE	Alu	AluSx
CAediting_548576	chr7_65003395_-	SINE	Alu	AluSx
CAediting_548577	chr7_65003399_-	SINE	Alu	AluSx
CAediting_548578	chr7_65003419_-	SINE	Alu	AluSx
CAediting_548579	chr7_65003443_-	SINE	Alu	AluSx
CAediting_548580	chr7_65004086_-	SINE	Alu	AluSp
CAediting_548581	chr7_65004095_-	SINE	Alu	AluSp
CAediting_548582	chr7_65004107_-	SINE	Alu	AluSp
CAediting_548583	chr7_65004169_-	SINE	Alu	AluSp
CAediting_548584	chr7_65004189_-	SINE	Alu	AluSp
CAediting_548585	chr7_65004198_-	SINE	Alu	AluSp
CAediting_548586	chr7_65004213_-	SINE	Alu	AluSp
CAediting_548587	chr7_65004214_-	SINE	Alu	AluSp
CAediting_548588	chr7_65004218_-	SINE	Alu	AluSp
CAediting_548589	chr7_65004241_-	SINE	Alu	AluSp
CAediting_548590	chr7_65004251_-	SINE	Alu	AluSp
CAediting_548591	chr7_65004255_-	SINE	Alu	AluSp
CAediting_548592	chr7_65004263_-	SINE	Alu	AluSp
CAediting_548593	chr7_65004268_-	SINE	Alu	AluSp
CAediting_548594	chr7_65004280_-	SINE	Alu	AluSp
CAediting_548595	chr7_65004281_-	SINE	Alu	AluSp
CAediting_548596	chr7_65004305_-	SINE	Alu	AluSp
CAediting_548597	chr7_65004361_-	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for ERV3-1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000213462.4.ERV3-1.

Correlation between RNA A-to-I editing and PSI for ENSG00000213462.4.ERV3-1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ERV3-1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ERV3-1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ERV3-1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ERV3-1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000528878.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_548580	ENST00000528878.1	chr7_65004086_-	-550.10	-546.10	-561.20
CAediting_548581	ENST00000528878.1	chr7_65004095_-	-547.60	-546.10	-561.20
CAediting_548582	ENST00000528878.1	chr7_65004107_-	-546.10	-546.10	-561.20
CAediting_548583	ENST00000528878.1	chr7_65004169_-	-546.50	-546.10	-561.20
CAediting_548584	ENST00000528878.1	chr7_65004189_-	-546.10	-546.10	-561.20
CAediting_548585	ENST00000528878.1	chr7_65004198_-	-548.90	-546.10	-561.20
CAediting_548586	ENST00000528878.1	chr7_65004213_-	-547.40	-546.10	-561.20
CAediting_548587	ENST00000528878.1	chr7_65004214_-	-545.80	-546.10	-561.20
CAediting_548588	ENST00000528878.1	chr7_65004218_-	-546.00	-546.10	-561.20
CAediting_548589	ENST00000528878.1	chr7_65004241_-	-549.60	-546.10	-561.20
CAediting_548590	ENST00000528878.1	chr7_65004251_-	-546.00	-546.10	-561.20
CAediting_548591	ENST00000528878.1	chr7_65004255_-	-547.40	-546.10	-561.20
CAediting_548592	ENST00000528878.1	chr7_65004263_-	-549.10	-546.10	-561.20
CAediting_548593	ENST00000528878.1	chr7_65004268_-	-545.10	-546.10	-561.20
CAediting_548594	ENST00000528878.1	chr7_65004280_-	-545.80	-546.10	-561.20
CAediting_548595	ENST00000528878.1	chr7_65004281_-	-547.60	-546.10	-561.20
CAediting_548596	ENST00000528878.1	chr7_65004305_-	-546.40	-546.10	-561.20
CAediting_548597	ENST00000528878.1	chr7_65004361_-	-545.20	-546.10	-561.20

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Relation with ADAR for ERV3-1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_548502	chr7_65000553_-	0.00124639744086278	0.407092584814312	.	.	.	.
LUAD	CAediting_548502	chr7_65000553_-	0.0047010504132532	0.277790862749715	.	.	.	.

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Relation with cancer stages for ERV3-1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_548502	chr7_65000553_-	0.0327294800883177	0.276101905744528
BRCA	pathologic_stage	CAediting_548502	chr7_65000553_-	0.0132245868289031	0.28876617573682

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Relation with survival for ERV3-1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ERV3-1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ERV3-1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene