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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ERBB2 (CAeditome ID:2064)

Gene summary for ERBB2

check button Gene summary
Gene informationGene symbol

ERBB2

Gene ID

2064

Gene nameerb-b2 receptor tyrosine kinase 2
SynonymsCD340|HER-2|HER-2/neu|HER2|MLN 19|NEU|NGL|TKR1
Cytomap

17q12

Type of geneprotein-coding
Descriptionreceptor tyrosine-protein kinase erbB-2c-erb B2/neu proteinherstatinhuman epidermal growth factor receptor 2metastatic lymph node gene 19 proteinneuro/glioblastoma derived oncogene homologneuroblastoma/glioblastoma derived oncogene homologproto-onc
Modification date20210531
UniProtAcc

P04626

Context- 29941010(Targeting ERBB2 mutations in solid tumors: biological and clinical implications)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
ERBB2

GO:0007166

Receptor tyrosine-protein kinase erbB-2

9685399

ERBB2

GO:0019838

Receptor tyrosine-protein kinase erbB-2

7514177

ERBB2

GO:0001042

Receptor tyrosine-protein kinase erbB-2

21555369

ERBB2

GO:0004713

Receptor tyrosine-protein kinase erbB-2

12000754

ERBB2

GO:0004713

Receptor tyrosine-protein kinase erbB-2

7556068

ERBB2

GO:0004714

Receptor tyrosine-protein kinase erbB-2

7514177

ERBB2

GO:0004888

Receptor tyrosine-protein kinase erbB-2

7514177

ERBB2

GO:0007165

Receptor tyrosine-protein kinase erbB-2

10572067

ERBB2

GO:0007169

Receptor tyrosine-protein kinase erbB-2

7514177

ERBB2

GO:0014065

Receptor tyrosine-protein kinase erbB-2

7556068

ERBB2

GO:0018108

Receptor tyrosine-protein kinase erbB-2

12000754

ERBB2

GO:0032886

Receptor tyrosine-protein kinase erbB-2

20937854

ERBB2

GO:0035556

Receptor tyrosine-protein kinase erbB-2

19372587

ERBB2

GO:0042060

Receptor tyrosine-protein kinase erbB-2

12646923

ERBB2

GO:0043406

Receptor tyrosine-protein kinase erbB-2

10572067

ERBB2

GO:0045785

Receptor tyrosine-protein kinase erbB-2

7556068

ERBB2

GO:0046777

Receptor tyrosine-protein kinase erbB-2

7556068

ERBB2

GO:0050679

Receptor tyrosine-protein kinase erbB-2

10572067

ERBB2

GO:0071363

Receptor tyrosine-protein kinase erbB-2

20010870

ERBB2

GO:0090314

Receptor tyrosine-protein kinase erbB-2

20010870

ERBB2

GO:0005634

Receptor tyrosine-protein kinase erbB-2

16314522

ERBB2

GO:0005634

Receptor tyrosine-protein kinase erbB-2

21555369

ERBB2

GO:0005829

Receptor tyrosine-protein kinase erbB-2

0000052

ERBB2

GO:0005886

Receptor tyrosine-protein kinase erbB-2

0000052

ERBB2

GO:0005886

Receptor tyrosine-protein kinase erbB-2

20010870

ERBB2

GO:0010008

Receptor tyrosine-protein kinase erbB-2

16314522

ERBB2

GO:0016323

Receptor tyrosine-protein kinase erbB-2

12646923

ERBB2

GO:0038143

Receptor tyrosine-protein kinase erbB-2

12000754

ERBB2

GO:0043235

Receptor tyrosine-protein kinase erbB-2

23382219

ERBB2

GO:0043235

Receptor tyrosine-protein kinase erbB-2

7514177


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RNA A-to-I events for ERBB2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000141736.12
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1191341(39697797, +), CAediting_1191342(39698323, +), CAediting_1191343(39698324, +), CAediting_1191344(39698466, +), CAediting_1191345(39698470, +), CAediting_1191346(39699188, +), CAediting_1191347(39699258, +), CAediting_1191348(39699273, +), CAediting_1191349(39699283, +), CAediting_1191350(39699284, +), CAediting_1191351(39699302, +), CAediting_1191352(39699304, +), CAediting_1191353(39699314, +), CAediting_1191354(39699330, +), CAediting_1191355(39699340, +), CAediting_1191356(39699341, +), CAediting_1191357(39704298, +), CAediting_1191358(39707851, +), CAediting_1191359(39707875, +), CAediting_1191360(39707905, +), CAediting_1191361(39707981, +), CAediting_1191362(39707989, +), CAediting_1191363(39711017, +), CAediting_1191364(39711041, +), CAediting_1191365(39713151, +), CAediting_1191366(39713153, +), CAediting_1191367(39713167, +), CAediting_1191368(39713226, +), CAediting_1191369(39713227, +), CAediting_1191370(39713230, +), CAediting_1191371(39713231, +), CAediting_1191372(39713256, +), CAediting_1191373(39713301, +), CAediting_1191374(39713307, +), CAediting_1191375(39713310, +), CAediting_1191376(39713327, +), CAediting_1191377(39713377, +), CAediting_1191378(39713386, +), CAediting_1191379(39713387, +), CAediting_1191380(39713399, +), CAediting_1191381(39713495, +), CAediting_1191382(39713496, +), CAediting_1191383(39713501, +), CAediting_1191384(39713549, +), CAediting_1191385(39713550, +), CAediting_1191386(39713565, +), CAediting_1191387(39713596, +), CAediting_1191388(39713606, +), CAediting_1191389(39713610, +), CAediting_1191390(39713630, +), CAediting_1191391(39713642, +), CAediting_1191392(39713673, +), CAediting_1191393(39713674, +), CAediting_1191394(39713698, +), CAediting_1191395(39713705, +), CAediting_1191396(39713794, +), CAediting_1191397(39713800, +), CAediting_1191398(39713801, +), CAediting_1191399(39713824, +), CAediting_1191400(39713827, +), CAediting_1191401(39713855, +), CAediting_1191402(39713860, +), CAediting_1191403(39713874, +), CAediting_1191404(39713885, +), CAediting_1191405(39713891, +), CAediting_1191406(39713901, +), CAediting_1191407(39713903, +), CAediting_1191408(39713911, +), CAediting_1191409(39713927, +), CAediting_1191410(39713931, +), CAediting_1191411(39713937, +), CAediting_1191412(39713947, +), CAediting_1191413(39713950, +), CAediting_1191414(39713973, +), CAediting_1191415(39713978, +), CAediting_1191416(39714010, +), CAediting_1191417(39714013, +), CAediting_1191418(39714040, +), CAediting_1191419(39714043, +), CAediting_1191420(39714796, +), CAediting_1191421(39714807, +), CAediting_1191422(39714828, +), CAediting_1191423(39714834, +), CAediting_1191424(39714869, +), CAediting_1191425(39714870, +), CAediting_1191426(39714899, +), CAediting_1191427(39714900, +), CAediting_1191428(39714909, +), CAediting_1191429(39714911, +), CAediting_1191430(39714944, +), CAediting_1191431(39714953, +), CAediting_1191432(39715029, +), CAediting_1191433(39715030, +), CAediting_1191434(39717869, +), CAediting_1191435(39717872, +), CAediting_1191436(39717875, +), CAediting_1191437(39717893, +), CAediting_1191438(39717900, +), CAediting_1191439(39717959, +), CAediting_1191440(39717997, +), CAediting_1191441(39718012, +), CAediting_1191442(39718021, +), CAediting_1191443(39718033, +), CAediting_1191444(39718034, +), CAediting_1191445(39718046, +), CAediting_1191446(39718051, +), CAediting_1191447(39718058, +), CAediting_1191448(39718074, +), CAediting_1191449(39718086, +), CAediting_1191450(39718088, +), CAediting_1191451(39718237, +), CAediting_1191452(39718272, +), CAediting_1191453(39718530, +), CAediting_1191454(39718536, +), CAediting_1191455(39718542, +), CAediting_1191456(39718548, +), CAediting_1191457(39718551, +), CAediting_1191458(39718569, +), CAediting_1191459(39718578, +), CAediting_1191460(39718591, +), CAediting_1191461(39718655, +), CAediting_1191462(39718901, +), CAediting_1191463(39718918, +), CAediting_1191464(39718928, +), CAediting_1191465(39718938, +), CAediting_1191466(39718939, +), CAediting_1191467(39718940, +), CAediting_1191468(39718944, +), CAediting_1191469(39718945, +), CAediting_1191470(39718948, +), CAediting_1191471(39718949, +), CAediting_1191472(39718950, +), CAediting_1191473(39718962, +), CAediting_1191474(39718997, +), CAediting_1191475(39719005, +), CAediting_1191476(39719006, +), CAediting_1191477(39719011, +), CAediting_1191478(39719032, +), CAediting_1191479(39719051, +), CAediting_1191480(39719054, +), CAediting_1191481(39719059, +), CAediting_1191482(39719060, +), CAediting_1191483(39719075, +), CAediting_1191484(39719082, +), CAediting_1191485(39719083, +), CAediting_1191486(39719084, +), CAediting_1191487(39719099, +), CAediting_1191488(39719100, +), CAediting_1191489(39719101, +), CAediting_1191490(39719102, +), CAediting_1191491(39719105, +), CAediting_1191492(39719114, +), CAediting_1191493(39719118, +), CAediting_1191494(39719140, +), CAediting_1191495(39719141, +), CAediting_1191496(39719155, +), CAediting_1191497(39719157, +), CAediting_1191498(39719163, +), CAediting_1191499(39719167, +), CAediting_1191500(39719173, +), CAediting_1191501(39719181, +), CAediting_1191502(39719182, +), CAediting_1191503(39719190, +), CAediting_1191504(39719202, +), CAediting_1191505(39719206, +), CAediting_1191506(39719218, +), CAediting_1191507(39719221, +), CAediting_1191508(39719232, +), CAediting_1191509(39719261, +), CAediting_1191510(39719313, +), CAediting_1191511(39719344, +), CAediting_1191512(39719353, +), CAediting_1191513(39719370, +), CAediting_1191514(39719372, +), CAediting_1191515(39719373, +), CAediting_1191516(39720730, +), CAediting_1191517(39720767, +), CAediting_1191518(39720789, +), CAediting_1191519(39720791, +), CAediting_1191520(39720924, +), CAediting_1191521(39721160, +), CAediting_1191522(39721170, +), CAediting_1191523(39721415, +), CAediting_1191524(39721429, +), CAediting_1191525(39721440, +), CAediting_1191526(39721448, +), CAediting_1191527(39721454, +), CAediting_1191528(39721457, +), CAediting_1191529(39721483, +), CAediting_1191530(39721958, +), CAediting_1191531(39721975, +), CAediting_1191532(39721982, +), CAediting_1191533(39721999, +), CAediting_1191534(39722005, +), CAediting_1191535(39722019, +), CAediting_1191536(39722020, +), CAediting_1191537(39722036, +), CAediting_1191538(39722058, +), CAediting_1191539(39722060, +), CAediting_1191540(39722084, +), CAediting_1191541(39722085, +), CAediting_1191542(39722092, +), CAediting_1191543(39722098, +), CAediting_1191544(39722101, +), CAediting_1191545(39722123, +), CAediting_1191546(39722152, +), CAediting_1191547(39722170, +), CAediting_1191548(39722225, +), CAediting_1191549(39722247, +), CAediting_1191550(39722248, +), CAediting_1191551(39722253, +), CAediting_1191552(39722261, +), CAediting_1191553(39722269, +), CAediting_1191554(39722293, +), CAediting_1191555(39722295, +), CAediting_1191556(39722296, +), CAediting_1191557(39722317, +), CAediting_1191558(39722319, +), CAediting_1191559(39722321, +), CAediting_1191560(39722332, +), CAediting_1191561(39722338, +), CAediting_1191562(39722342, +), CAediting_1191563(39722343, +), CAediting_1191564(39722344, +), CAediting_1191565(39722345, +), CAediting_1191566(39722347, +), CAediting_1191567(39722349, +), CAediting_1191568(39722351, +), CAediting_1191569(39722353, +), CAediting_1191570(39722356, +), CAediting_1191571(39722382, +), CAediting_1191572(39722388, +), CAediting_1191573(39722392, +), CAediting_1191574(39722400, +), CAediting_1191575(39722405, +), CAediting_1191576(39722412, +), CAediting_1191577(39722413, +), CAediting_1191578(39722423, +), CAediting_1191579(39722428, +), CAediting_1191580(39722443, +), CAediting_1191581(39722459, +), CAediting_1191582(39722462, +), CAediting_1191583(39722481, +), CAediting_1191584(39722771, +), CAediting_1191585(39722796, +), CAediting_1191586(39722817, +), CAediting_1191587(39722834, +), CAediting_1191588(39722842, +), CAediting_1191589(39722843, +), CAediting_1191590(39722846, +), CAediting_1191591(39722856, +), CAediting_1191592(39722858, +), CAediting_1191593(39722862, +), CAediting_1191594(39722904, +), CAediting_1191595(39722909, +), CAediting_1191596(39722970, +), CAediting_1191597(39722975, +), CAediting_1191598(39722984, +), CAediting_1191599(39722985, +), CAediting_1191600(39722991, +), CAediting_1191601(39724199, +), CAediting_1191602(39724319, +), CAediting_1191603(39724389, +), CAediting_1191604(39726095, +), CAediting_1191605(39726127, +), CAediting_1191606(39726156, +), CAediting_1191607(39726169, +), CAediting_1191608(39726227, +),

Top

RNA editing positional annotations for ERBB2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1191341chr17_39697797_+intronic
CAediting_1191342chr17_39698323_+intronic
CAediting_1191343chr17_39698324_+intronic
CAediting_1191344chr17_39698466_+intronic
CAediting_1191345chr17_39698470_+intronic
CAediting_1191346chr17_39699188_+intronic
CAediting_1191347chr17_39699258_+intronic
CAediting_1191348chr17_39699273_+intronic
CAediting_1191349chr17_39699283_+intronic
CAediting_1191350chr17_39699284_+intronic
CAediting_1191351chr17_39699302_+intronic
CAediting_1191352chr17_39699304_+intronic
CAediting_1191353chr17_39699314_+intronic
CAediting_1191354chr17_39699330_+intronic
CAediting_1191355chr17_39699340_+intronic
CAediting_1191356chr17_39699341_+intronic
CAediting_1191357chr17_39704298_+ncRNA_intronic
CAediting_1191358chr17_39707851_+ncRNA_exonic
CAediting_1191359chr17_39707875_+ncRNA_exonic
CAediting_1191360chr17_39707905_+ncRNA_exonic
CAediting_1191361chr17_39707981_+ncRNA_exonic
CAediting_1191362chr17_39707989_+ncRNA_exonic
CAediting_1191363chr17_39711017_+ncRNA_intronic
CAediting_1191364chr17_39711041_+ncRNA_intronic
CAediting_1191365chr17_39713151_+splicing
CAediting_1191366chr17_39713153_+exonic
CAediting_1191367chr17_39713167_+exonic
CAediting_1191368chr17_39713226_+exonic
CAediting_1191369chr17_39713227_+exonic
CAediting_1191370chr17_39713230_+exonic
CAediting_1191371chr17_39713231_+exonic
CAediting_1191372chr17_39713256_+exonic
CAediting_1191373chr17_39713301_+ncRNA_intronic
CAediting_1191374chr17_39713307_+ncRNA_intronic
CAediting_1191375chr17_39713310_+ncRNA_intronic
CAediting_1191376chr17_39713327_+ncRNA_intronic
CAediting_1191377chr17_39713377_+ncRNA_intronic
CAediting_1191378chr17_39713386_+ncRNA_intronic
CAediting_1191379chr17_39713387_+ncRNA_intronic
CAediting_1191380chr17_39713399_+ncRNA_intronic
CAediting_1191381chr17_39713495_+ncRNA_intronic
CAediting_1191382chr17_39713496_+ncRNA_intronic
CAediting_1191383chr17_39713501_+ncRNA_intronic
CAediting_1191384chr17_39713549_+ncRNA_intronic
CAediting_1191385chr17_39713550_+ncRNA_intronic
CAediting_1191386chr17_39713565_+ncRNA_intronic
CAediting_1191387chr17_39713596_+ncRNA_intronic
CAediting_1191388chr17_39713606_+ncRNA_intronic
CAediting_1191389chr17_39713610_+ncRNA_intronic
CAediting_1191390chr17_39713630_+ncRNA_intronic
CAediting_1191391chr17_39713642_+ncRNA_intronic
CAediting_1191392chr17_39713673_+ncRNA_intronic
CAediting_1191393chr17_39713674_+ncRNA_intronic
CAediting_1191394chr17_39713698_+ncRNA_intronic
CAediting_1191395chr17_39713705_+ncRNA_intronic
CAediting_1191396chr17_39713794_+ncRNA_intronic
CAediting_1191397chr17_39713800_+ncRNA_intronic
CAediting_1191398chr17_39713801_+ncRNA_intronic
CAediting_1191399chr17_39713824_+ncRNA_intronic
CAediting_1191400chr17_39713827_+ncRNA_intronic
CAediting_1191401chr17_39713855_+ncRNA_intronic
CAediting_1191402chr17_39713860_+ncRNA_intronic
CAediting_1191403chr17_39713874_+ncRNA_intronic
CAediting_1191404chr17_39713885_+ncRNA_intronic
CAediting_1191405chr17_39713891_+ncRNA_intronic
CAediting_1191406chr17_39713901_+ncRNA_intronic
CAediting_1191407chr17_39713903_+ncRNA_intronic
CAediting_1191408chr17_39713911_+ncRNA_intronic
CAediting_1191409chr17_39713927_+ncRNA_intronic
CAediting_1191410chr17_39713931_+ncRNA_intronic
CAediting_1191411chr17_39713937_+ncRNA_intronic
CAediting_1191412chr17_39713947_+ncRNA_intronic
CAediting_1191413chr17_39713950_+ncRNA_intronic
CAediting_1191414chr17_39713973_+ncRNA_intronic
CAediting_1191415chr17_39713978_+ncRNA_intronic
CAediting_1191416chr17_39714010_+ncRNA_intronic
CAediting_1191417chr17_39714013_+ncRNA_intronic
CAediting_1191418chr17_39714040_+ncRNA_intronic
CAediting_1191419chr17_39714043_+ncRNA_intronic
CAediting_1191420chr17_39714796_+ncRNA_intronic
CAediting_1191421chr17_39714807_+ncRNA_intronic
CAediting_1191422chr17_39714828_+ncRNA_intronic
CAediting_1191423chr17_39714834_+ncRNA_intronic
CAediting_1191424chr17_39714869_+ncRNA_intronic
CAediting_1191425chr17_39714870_+ncRNA_intronic
CAediting_1191426chr17_39714899_+ncRNA_intronic
CAediting_1191427chr17_39714900_+ncRNA_intronic
CAediting_1191428chr17_39714909_+ncRNA_intronic
CAediting_1191429chr17_39714911_+ncRNA_intronic
CAediting_1191430chr17_39714944_+ncRNA_intronic
CAediting_1191431chr17_39714953_+ncRNA_intronic
CAediting_1191432chr17_39715029_+ncRNA_intronic
CAediting_1191433chr17_39715030_+ncRNA_intronic
CAediting_1191434chr17_39717869_+ncRNA_intronic
CAediting_1191435chr17_39717872_+ncRNA_intronic
CAediting_1191436chr17_39717875_+ncRNA_intronic
CAediting_1191437chr17_39717893_+ncRNA_intronic
CAediting_1191438chr17_39717900_+ncRNA_intronic
CAediting_1191439chr17_39717959_+ncRNA_intronic
CAediting_1191440chr17_39717997_+ncRNA_intronic
CAediting_1191441chr17_39718012_+ncRNA_intronic
CAediting_1191442chr17_39718021_+ncRNA_intronic
CAediting_1191443chr17_39718033_+ncRNA_intronic
CAediting_1191444chr17_39718034_+ncRNA_intronic
CAediting_1191445chr17_39718046_+ncRNA_intronic
CAediting_1191446chr17_39718051_+ncRNA_intronic
CAediting_1191447chr17_39718058_+ncRNA_intronic
CAediting_1191448chr17_39718074_+ncRNA_intronic
CAediting_1191449chr17_39718086_+ncRNA_intronic
CAediting_1191450chr17_39718088_+ncRNA_intronic
CAediting_1191451chr17_39718237_+ncRNA_intronic
CAediting_1191452chr17_39718272_+ncRNA_intronic
CAediting_1191453chr17_39718530_+ncRNA_intronic
CAediting_1191454chr17_39718536_+ncRNA_intronic
CAediting_1191455chr17_39718542_+ncRNA_intronic
CAediting_1191456chr17_39718548_+ncRNA_intronic
CAediting_1191457chr17_39718551_+ncRNA_intronic
CAediting_1191458chr17_39718569_+ncRNA_intronic
CAediting_1191459chr17_39718578_+ncRNA_intronic
CAediting_1191460chr17_39718591_+ncRNA_intronic
CAediting_1191461chr17_39718655_+ncRNA_intronic
CAediting_1191462chr17_39718901_+ncRNA_intronic
CAediting_1191463chr17_39718918_+ncRNA_intronic
CAediting_1191464chr17_39718928_+ncRNA_intronic
CAediting_1191465chr17_39718938_+ncRNA_intronic
CAediting_1191466chr17_39718939_+ncRNA_intronic
CAediting_1191467chr17_39718940_+ncRNA_intronic
CAediting_1191468chr17_39718944_+ncRNA_intronic
CAediting_1191469chr17_39718945_+ncRNA_intronic
CAediting_1191470chr17_39718948_+ncRNA_intronic
CAediting_1191471chr17_39718949_+ncRNA_intronic
CAediting_1191472chr17_39718950_+ncRNA_intronic
CAediting_1191473chr17_39718962_+ncRNA_intronic
CAediting_1191474chr17_39718997_+ncRNA_intronic
CAediting_1191475chr17_39719005_+ncRNA_intronic
CAediting_1191476chr17_39719006_+ncRNA_intronic
CAediting_1191477chr17_39719011_+ncRNA_intronic
CAediting_1191478chr17_39719032_+ncRNA_intronic
CAediting_1191479chr17_39719051_+ncRNA_intronic
CAediting_1191480chr17_39719054_+ncRNA_intronic
CAediting_1191481chr17_39719059_+ncRNA_intronic
CAediting_1191482chr17_39719060_+ncRNA_intronic
CAediting_1191483chr17_39719075_+ncRNA_intronic
CAediting_1191484chr17_39719082_+ncRNA_intronic
CAediting_1191485chr17_39719083_+ncRNA_intronic
CAediting_1191486chr17_39719084_+ncRNA_intronic
CAediting_1191487chr17_39719099_+ncRNA_intronic
CAediting_1191488chr17_39719100_+ncRNA_intronic
CAediting_1191489chr17_39719101_+ncRNA_intronic
CAediting_1191490chr17_39719102_+ncRNA_intronic
CAediting_1191491chr17_39719105_+ncRNA_intronic
CAediting_1191492chr17_39719114_+ncRNA_intronic
CAediting_1191493chr17_39719118_+ncRNA_intronic
CAediting_1191494chr17_39719140_+ncRNA_intronic
CAediting_1191495chr17_39719141_+ncRNA_intronic
CAediting_1191496chr17_39719155_+ncRNA_intronic
CAediting_1191497chr17_39719157_+ncRNA_intronic
CAediting_1191498chr17_39719163_+ncRNA_intronic
CAediting_1191499chr17_39719167_+ncRNA_intronic
CAediting_1191500chr17_39719173_+ncRNA_intronic
CAediting_1191501chr17_39719181_+ncRNA_intronic
CAediting_1191502chr17_39719182_+ncRNA_intronic
CAediting_1191503chr17_39719190_+ncRNA_intronic
CAediting_1191504chr17_39719202_+ncRNA_intronic
CAediting_1191505chr17_39719206_+ncRNA_intronic
CAediting_1191506chr17_39719218_+ncRNA_intronic
CAediting_1191507chr17_39719221_+ncRNA_intronic
CAediting_1191508chr17_39719232_+ncRNA_intronic
CAediting_1191509chr17_39719261_+ncRNA_intronic
CAediting_1191510chr17_39719313_+ncRNA_intronic
CAediting_1191511chr17_39719344_+ncRNA_intronic
CAediting_1191512chr17_39719353_+ncRNA_intronic
CAediting_1191513chr17_39719370_+ncRNA_intronic
CAediting_1191514chr17_39719372_+ncRNA_intronic
CAediting_1191515chr17_39719373_+ncRNA_intronic
CAediting_1191516chr17_39720730_+ncRNA_intronic
CAediting_1191517chr17_39720767_+ncRNA_intronic
CAediting_1191518chr17_39720789_+ncRNA_intronic
CAediting_1191519chr17_39720791_+ncRNA_intronic
CAediting_1191520chr17_39720924_+ncRNA_intronic
CAediting_1191521chr17_39721160_+ncRNA_intronic
CAediting_1191522chr17_39721170_+ncRNA_intronic
CAediting_1191523chr17_39721415_+ncRNA_intronic
CAediting_1191524chr17_39721429_+ncRNA_intronic
CAediting_1191525chr17_39721440_+ncRNA_intronic
CAediting_1191526chr17_39721448_+ncRNA_intronic
CAediting_1191527chr17_39721454_+ncRNA_intronic
CAediting_1191528chr17_39721457_+ncRNA_intronic
CAediting_1191529chr17_39721483_+ncRNA_intronic
CAediting_1191530chr17_39721958_+ncRNA_intronic
CAediting_1191531chr17_39721975_+ncRNA_intronic
CAediting_1191532chr17_39721982_+ncRNA_intronic
CAediting_1191533chr17_39721999_+ncRNA_intronic
CAediting_1191534chr17_39722005_+ncRNA_intronic
CAediting_1191535chr17_39722019_+ncRNA_intronic
CAediting_1191536chr17_39722020_+ncRNA_intronic
CAediting_1191537chr17_39722036_+ncRNA_intronic
CAediting_1191538chr17_39722058_+ncRNA_intronic
CAediting_1191539chr17_39722060_+ncRNA_intronic
CAediting_1191540chr17_39722084_+ncRNA_intronic
CAediting_1191541chr17_39722085_+ncRNA_intronic
CAediting_1191542chr17_39722092_+ncRNA_intronic
CAediting_1191543chr17_39722098_+ncRNA_intronic
CAediting_1191544chr17_39722101_+ncRNA_intronic
CAediting_1191545chr17_39722123_+ncRNA_intronic
CAediting_1191546chr17_39722152_+ncRNA_intronic
CAediting_1191547chr17_39722170_+ncRNA_intronic
CAediting_1191548chr17_39722225_+ncRNA_intronic
CAediting_1191549chr17_39722247_+ncRNA_intronic
CAediting_1191550chr17_39722248_+ncRNA_intronic
CAediting_1191551chr17_39722253_+ncRNA_intronic
CAediting_1191552chr17_39722261_+ncRNA_intronic
CAediting_1191553chr17_39722269_+ncRNA_intronic
CAediting_1191554chr17_39722293_+ncRNA_intronic
CAediting_1191555chr17_39722295_+ncRNA_intronic
CAediting_1191556chr17_39722296_+ncRNA_intronic
CAediting_1191557chr17_39722317_+ncRNA_intronic
CAediting_1191558chr17_39722319_+ncRNA_intronic
CAediting_1191559chr17_39722321_+ncRNA_intronic
CAediting_1191560chr17_39722332_+ncRNA_intronic
CAediting_1191561chr17_39722338_+ncRNA_intronic
CAediting_1191562chr17_39722342_+ncRNA_intronic
CAediting_1191563chr17_39722343_+ncRNA_intronic
CAediting_1191564chr17_39722344_+ncRNA_intronic
CAediting_1191565chr17_39722345_+ncRNA_intronic
CAediting_1191566chr17_39722347_+ncRNA_intronic
CAediting_1191567chr17_39722349_+ncRNA_intronic
CAediting_1191568chr17_39722351_+ncRNA_intronic
CAediting_1191569chr17_39722353_+ncRNA_intronic
CAediting_1191570chr17_39722356_+ncRNA_intronic
CAediting_1191571chr17_39722382_+ncRNA_intronic
CAediting_1191572chr17_39722388_+ncRNA_intronic
CAediting_1191573chr17_39722392_+ncRNA_intronic
CAediting_1191574chr17_39722400_+ncRNA_intronic
CAediting_1191575chr17_39722405_+ncRNA_intronic
CAediting_1191576chr17_39722412_+ncRNA_intronic
CAediting_1191577chr17_39722413_+ncRNA_intronic
CAediting_1191578chr17_39722423_+ncRNA_intronic
CAediting_1191579chr17_39722428_+ncRNA_intronic
CAediting_1191580chr17_39722443_+ncRNA_intronic
CAediting_1191581chr17_39722459_+ncRNA_intronic
CAediting_1191582chr17_39722462_+ncRNA_intronic
CAediting_1191583chr17_39722481_+ncRNA_intronic
CAediting_1191584chr17_39722771_+ncRNA_intronic
CAediting_1191585chr17_39722796_+ncRNA_intronic
CAediting_1191586chr17_39722817_+ncRNA_intronic
CAediting_1191587chr17_39722834_+ncRNA_intronic
CAediting_1191588chr17_39722842_+ncRNA_intronic
CAediting_1191589chr17_39722843_+ncRNA_intronic
CAediting_1191590chr17_39722846_+ncRNA_intronic
CAediting_1191591chr17_39722856_+ncRNA_intronic
CAediting_1191592chr17_39722858_+ncRNA_intronic
CAediting_1191593chr17_39722862_+ncRNA_intronic
CAediting_1191594chr17_39722904_+ncRNA_intronic
CAediting_1191595chr17_39722909_+ncRNA_intronic
CAediting_1191596chr17_39722970_+ncRNA_intronic
CAediting_1191597chr17_39722975_+ncRNA_intronic
CAediting_1191598chr17_39722984_+ncRNA_intronic
CAediting_1191599chr17_39722985_+ncRNA_intronic
CAediting_1191600chr17_39722991_+ncRNA_intronic
CAediting_1191601chr17_39724199_+ncRNA_intronic
CAediting_1191602chr17_39724319_+ncRNA_intronic
CAediting_1191603chr17_39724389_+ncRNA_intronic
CAediting_1191604chr17_39726095_+ncRNA_exonic
CAediting_1191605chr17_39726127_+ncRNA_exonic
CAediting_1191606chr17_39726156_+ncRNA_exonic
CAediting_1191607chr17_39726169_+ncRNA_exonic
CAediting_1191608chr17_39726227_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1191341chr17_39697797_+SINEAluAluSg
CAediting_1191342chr17_39698323_+SINEAluAluY
CAediting_1191343chr17_39698324_+SINEAluAluY
CAediting_1191344chr17_39698466_+SINEAluAluY
CAediting_1191345chr17_39698470_+SINEAluAluY
CAediting_1191346chr17_39699188_+SINEAluAluSp
CAediting_1191347chr17_39699258_+SINEAluAluSp
CAediting_1191348chr17_39699273_+SINEAluAluSp
CAediting_1191349chr17_39699283_+SINEAluAluSp
CAediting_1191350chr17_39699284_+SINEAluAluSp
CAediting_1191351chr17_39699302_+SINEAluAluSp
CAediting_1191352chr17_39699304_+SINEAluAluSp
CAediting_1191353chr17_39699314_+SINEAluAluSp
CAediting_1191354chr17_39699330_+SINEAluAluSp
CAediting_1191355chr17_39699340_+SINEAluAluSp
CAediting_1191356chr17_39699341_+SINEAluAluSp
CAediting_1191357chr17_39704298_+SINEAluAluSg
CAediting_1191358chr17_39707851_+SINEAluAluSp
CAediting_1191359chr17_39707875_+SINEAluAluSp
CAediting_1191360chr17_39707905_+SINEAluAluSp
CAediting_1191361chr17_39707981_+SINEAluAluSp
CAediting_1191362chr17_39707989_+SINEAluAluSp
CAediting_1191363chr17_39711017_+SINEAluAluSq
CAediting_1191364chr17_39711041_+SINEAluAluSq
CAediting_1191365chr17_39713151_+SINEAluAluSc
CAediting_1191366chr17_39713153_+SINEAluAluSc
CAediting_1191367chr17_39713167_+SINEAluAluSc
CAediting_1191368chr17_39713226_+SINEAluAluSc
CAediting_1191369chr17_39713227_+SINEAluAluSc
CAediting_1191370chr17_39713230_+SINEAluAluSc
CAediting_1191371chr17_39713231_+SINEAluAluSc
CAediting_1191372chr17_39713256_+SINEAluAluSc
CAediting_1191373chr17_39713301_+SINEAluAluSc
CAediting_1191374chr17_39713307_+SINEAluAluSc
CAediting_1191375chr17_39713310_+SINEAluAluSc
CAediting_1191376chr17_39713327_+SINEAluAluSc
CAediting_1191377chr17_39713377_+SINEAluAluSc
CAediting_1191378chr17_39713386_+SINEAluAluSc
CAediting_1191379chr17_39713387_+SINEAluAluSc
CAediting_1191380chr17_39713399_+SINEAluAluSc
CAediting_1191381chr17_39713495_+SINEAluAluSz
CAediting_1191382chr17_39713496_+SINEAluAluSz
CAediting_1191383chr17_39713501_+SINEAluAluSz
CAediting_1191384chr17_39713549_+SINEAluAluSz
CAediting_1191385chr17_39713550_+SINEAluAluSz
CAediting_1191386chr17_39713565_+SINEAluAluSz
CAediting_1191387chr17_39713596_+SINEAluAluSz
CAediting_1191388chr17_39713606_+SINEAluAluSz
CAediting_1191389chr17_39713610_+SINEAluAluSz
CAediting_1191390chr17_39713630_+SINEAluAluSz
CAediting_1191391chr17_39713642_+SINEAluAluSz
CAediting_1191392chr17_39713673_+SINEAluAluSz
CAediting_1191393chr17_39713674_+SINEAluAluSz
CAediting_1191394chr17_39713698_+SINEAluAluSz
CAediting_1191395chr17_39713705_+SINEAluAluSz
CAediting_1191396chr17_39713794_+SINEAluAluJb
CAediting_1191397chr17_39713800_+SINEAluAluJb
CAediting_1191398chr17_39713801_+SINEAluAluJb
CAediting_1191399chr17_39713824_+SINEAluAluJb
CAediting_1191400chr17_39713827_+SINEAluAluJb
CAediting_1191401chr17_39713855_+SINEAluAluJb
CAediting_1191402chr17_39713860_+SINEAluAluJb
CAediting_1191403chr17_39713874_+SINEAluAluJb
CAediting_1191404chr17_39713885_+SINEAluAluJb
CAediting_1191405chr17_39713891_+SINEAluAluJb
CAediting_1191406chr17_39713901_+SINEAluAluJb
CAediting_1191407chr17_39713903_+SINEAluAluJb
CAediting_1191408chr17_39713911_+SINEAluAluJb
CAediting_1191409chr17_39713927_+SINEAluAluJb
CAediting_1191410chr17_39713931_+SINEAluAluJb
CAediting_1191411chr17_39713937_+SINEAluAluJb
CAediting_1191412chr17_39713947_+SINEAluAluJb
CAediting_1191413chr17_39713950_+SINEAluAluJb
CAediting_1191414chr17_39713973_+SINEAluAluJb
CAediting_1191415chr17_39713978_+SINEAluAluJb
CAediting_1191416chr17_39714010_+SINEAluAluJb
CAediting_1191417chr17_39714013_+SINEAluAluJb
CAediting_1191418chr17_39714040_+SINEAluAluJb
CAediting_1191419chr17_39714043_+SINEAluAluJb
CAediting_1191420chr17_39714796_+SINEAluAluSc
CAediting_1191421chr17_39714807_+SINEAluAluSc
CAediting_1191422chr17_39714828_+SINEAluAluSc
CAediting_1191423chr17_39714834_+SINEAluAluSc
CAediting_1191424chr17_39714869_+SINEAluAluSc
CAediting_1191425chr17_39714870_+SINEAluAluSc
CAediting_1191426chr17_39714899_+SINEAluAluSc
CAediting_1191427chr17_39714900_+SINEAluAluSc
CAediting_1191428chr17_39714909_+SINEAluAluSc
CAediting_1191429chr17_39714911_+SINEAluAluSc
CAediting_1191430chr17_39714944_+SINEAluAluSc
CAediting_1191431chr17_39714953_+SINEAluAluSc
CAediting_1191432chr17_39715029_+SINEAluAluSc
CAediting_1191433chr17_39715030_+SINEAluAluSc
CAediting_1191434chr17_39717869_+SINEAluAluSx
CAediting_1191435chr17_39717872_+SINEAluAluSx
CAediting_1191436chr17_39717875_+SINEAluAluSx
CAediting_1191437chr17_39717893_+SINEAluAluSx
CAediting_1191438chr17_39717900_+SINEAluAluSx
CAediting_1191439chr17_39717959_+SINEAluAluSx
CAediting_1191440chr17_39717997_+SINEAluAluSx
CAediting_1191441chr17_39718012_+SINEAluAluSx
CAediting_1191442chr17_39718021_+SINEAluAluSx
CAediting_1191443chr17_39718033_+SINEAluAluSx
CAediting_1191444chr17_39718034_+SINEAluAluSx
CAediting_1191445chr17_39718046_+SINEAluAluSx
CAediting_1191446chr17_39718051_+SINEAluAluSx
CAediting_1191447chr17_39718058_+SINEAluAluSx
CAediting_1191448chr17_39718074_+SINEAluAluSx
CAediting_1191449chr17_39718086_+SINEAluAluSx
CAediting_1191450chr17_39718088_+SINEAluAluSx
CAediting_1191452chr17_39718272_+LINEL1L1ME3G
CAediting_1191453chr17_39718530_+SINEAluAluSz
CAediting_1191454chr17_39718536_+SINEAluAluSz
CAediting_1191455chr17_39718542_+SINEAluAluSz
CAediting_1191456chr17_39718548_+SINEAluAluSz
CAediting_1191457chr17_39718551_+SINEAluAluSz
CAediting_1191458chr17_39718569_+SINEAluAluSz
CAediting_1191459chr17_39718578_+SINEAluAluSz
CAediting_1191460chr17_39718591_+SINEAluAluSz
CAediting_1191461chr17_39718655_+SINEAluAluSz
CAediting_1191474chr17_39718997_+SINEAluAluSx1
CAediting_1191475chr17_39719005_+SINEAluAluSx1
CAediting_1191476chr17_39719006_+SINEAluAluSx1
CAediting_1191477chr17_39719011_+SINEAluAluSx1
CAediting_1191478chr17_39719032_+SINEAluAluSx1
CAediting_1191479chr17_39719051_+SINEAluAluSx1
CAediting_1191480chr17_39719054_+SINEAluAluSx1
CAediting_1191481chr17_39719059_+SINEAluAluSx1
CAediting_1191482chr17_39719060_+SINEAluAluSx1
CAediting_1191483chr17_39719075_+SINEAluAluSx1
CAediting_1191484chr17_39719082_+SINEAluAluSx1
CAediting_1191485chr17_39719083_+SINEAluAluSx1
CAediting_1191486chr17_39719084_+SINEAluAluSx1
CAediting_1191487chr17_39719099_+SINEAluAluSx1
CAediting_1191488chr17_39719100_+SINEAluAluSx1
CAediting_1191489chr17_39719101_+SINEAluAluSx1
CAediting_1191490chr17_39719102_+SINEAluAluSx1
CAediting_1191491chr17_39719105_+SINEAluAluSx1
CAediting_1191492chr17_39719114_+SINEAluAluSx1
CAediting_1191493chr17_39719118_+SINEAluAluSx1
CAediting_1191494chr17_39719140_+SINEAluAluSx1
CAediting_1191495chr17_39719141_+SINEAluAluSx1
CAediting_1191496chr17_39719155_+SINEAluAluSx1
CAediting_1191497chr17_39719157_+SINEAluAluSx1
CAediting_1191498chr17_39719163_+SINEAluAluSx1
CAediting_1191499chr17_39719167_+SINEAluAluSx1
CAediting_1191500chr17_39719173_+SINEAluAluSx1
CAediting_1191501chr17_39719181_+SINEAluAluSx1
CAediting_1191502chr17_39719182_+SINEAluAluSx1
CAediting_1191503chr17_39719190_+SINEAluAluSx1
CAediting_1191504chr17_39719202_+SINEAluAluSx1
CAediting_1191505chr17_39719206_+SINEAluAluSx1
CAediting_1191506chr17_39719218_+SINEAluAluSx1
CAediting_1191507chr17_39719221_+SINEAluAluSx1
CAediting_1191508chr17_39719232_+SINEAluAluSx1
CAediting_1191509chr17_39719261_+SINEAluAluSx1
CAediting_1191510chr17_39719313_+Simple_repeatSimple_repeat(TCCAGA)n
CAediting_1191516chr17_39720730_+SINEAluAluSc
CAediting_1191517chr17_39720767_+SINEAluAluSc
CAediting_1191518chr17_39720789_+SINEAluAluSc
CAediting_1191519chr17_39720791_+SINEAluAluSc
CAediting_1191520chr17_39720924_+SINEAluAluSc
CAediting_1191521chr17_39721160_+SINEAluAluJb
CAediting_1191522chr17_39721170_+SINEAluAluJb
CAediting_1191523chr17_39721415_+SINEAluAluSx
CAediting_1191524chr17_39721429_+SINEAluAluSx
CAediting_1191525chr17_39721440_+SINEAluAluSx
CAediting_1191526chr17_39721448_+SINEAluAluSx
CAediting_1191527chr17_39721454_+SINEAluAluSx
CAediting_1191528chr17_39721457_+SINEAluAluSx
CAediting_1191529chr17_39721483_+SINEAluAluSx
CAediting_1191530chr17_39721958_+SINEAluAluSp
CAediting_1191531chr17_39721975_+SINEAluAluSp
CAediting_1191532chr17_39721982_+SINEAluAluSp
CAediting_1191533chr17_39721999_+SINEAluAluSp
CAediting_1191534chr17_39722005_+SINEAluAluSp
CAediting_1191535chr17_39722019_+SINEAluAluSp
CAediting_1191536chr17_39722020_+SINEAluAluSp
CAediting_1191537chr17_39722036_+SINEAluAluSp
CAediting_1191538chr17_39722058_+SINEAluAluSp
CAediting_1191539chr17_39722060_+SINEAluAluSp
CAediting_1191540chr17_39722084_+SINEAluAluSp
CAediting_1191541chr17_39722085_+SINEAluAluSp
CAediting_1191542chr17_39722092_+SINEAluAluSp
CAediting_1191543chr17_39722098_+SINEAluAluSp
CAediting_1191544chr17_39722101_+SINEAluAluSp
CAediting_1191545chr17_39722123_+SINEAluAluSp
CAediting_1191546chr17_39722152_+SINEAluAluSp
CAediting_1191547chr17_39722170_+SINEAluAluSp
CAediting_1191548chr17_39722225_+SINEAluAluJr
CAediting_1191549chr17_39722247_+SINEAluAluJr
CAediting_1191550chr17_39722248_+SINEAluAluJr
CAediting_1191551chr17_39722253_+SINEAluAluJr
CAediting_1191552chr17_39722261_+SINEAluAluJr
CAediting_1191553chr17_39722269_+SINEAluAluJr
CAediting_1191554chr17_39722293_+SINEAluAluJr
CAediting_1191555chr17_39722295_+SINEAluAluJr
CAediting_1191556chr17_39722296_+SINEAluAluJr
CAediting_1191557chr17_39722317_+SINEAluAluJr
CAediting_1191558chr17_39722319_+SINEAluAluJr
CAediting_1191559chr17_39722321_+SINEAluAluJr
CAediting_1191560chr17_39722332_+SINEAluAluJr
CAediting_1191561chr17_39722338_+SINEAluAluJr
CAediting_1191562chr17_39722342_+SINEAluAluJr
CAediting_1191563chr17_39722343_+SINEAluAluJr
CAediting_1191564chr17_39722344_+SINEAluAluJr
CAediting_1191565chr17_39722345_+SINEAluAluJr
CAediting_1191566chr17_39722347_+SINEAluAluJr
CAediting_1191567chr17_39722349_+SINEAluAluJr
CAediting_1191568chr17_39722351_+SINEAluAluJr
CAediting_1191569chr17_39722353_+SINEAluAluJr
CAediting_1191570chr17_39722356_+SINEAluAluJr
CAediting_1191571chr17_39722382_+SINEAluAluJr
CAediting_1191572chr17_39722388_+SINEAluAluJr
CAediting_1191573chr17_39722392_+SINEAluAluJr
CAediting_1191574chr17_39722400_+SINEAluAluJr
CAediting_1191575chr17_39722405_+SINEAluAluJr
CAediting_1191576chr17_39722412_+SINEAluAluJr
CAediting_1191577chr17_39722413_+SINEAluAluJr
CAediting_1191578chr17_39722423_+SINEAluAluJr
CAediting_1191579chr17_39722428_+SINEAluAluJr
CAediting_1191580chr17_39722443_+SINEAluAluJr
CAediting_1191581chr17_39722459_+SINEAluAluJr
CAediting_1191582chr17_39722462_+SINEAluAluJr
CAediting_1191583chr17_39722481_+SINEAluAluJr
CAediting_1191584chr17_39722771_+SINEAluAluSx3
CAediting_1191585chr17_39722796_+SINEAluAluSx3
CAediting_1191586chr17_39722817_+SINEAluAluSx3
CAediting_1191587chr17_39722834_+SINEAluAluSx3
CAediting_1191588chr17_39722842_+SINEAluAluSx3
CAediting_1191589chr17_39722843_+SINEAluAluSx3
CAediting_1191590chr17_39722846_+SINEAluAluSx3
CAediting_1191591chr17_39722856_+SINEAluAluSx3
CAediting_1191592chr17_39722858_+SINEAluAluSx3
CAediting_1191593chr17_39722862_+SINEAluAluSx3
CAediting_1191594chr17_39722904_+SINEAluAluSx3
CAediting_1191595chr17_39722909_+SINEAluAluSx3
CAediting_1191596chr17_39722970_+SINEAluAluSx3
CAediting_1191597chr17_39722975_+SINEAluAluSx3
CAediting_1191598chr17_39722984_+SINEAluAluSx3
CAediting_1191599chr17_39722985_+SINEAluAluSx3
CAediting_1191600chr17_39722991_+SINEAluAluSx3
CAediting_1191601chr17_39724199_+SINEAluAluSx1
CAediting_1191602chr17_39724319_+SINEAluAluSg
CAediting_1191603chr17_39724389_+SINEAluAluSg
CAediting_1191604chr17_39726095_+SINEAluAluJr
CAediting_1191605chr17_39726127_+SINEAluAluJr
CAediting_1191606chr17_39726156_+SINEAluAluJr
CAediting_1191607chr17_39726169_+SINEAluAluJr
CAediting_1191608chr17_39726227_+SINEAluAluJr

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RNA A-to-I editing events in the alternative splicing sites for ERBB2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1191365chr17_39713151_+39713132:397131543SS0+1iTCATTTTATTTTTTGAGATAGAG-15.66TCATTTTATTTTTTGAGATGGAG-6.91
ESCAediting_1191365chr17_39713151_+39713148:397131703SS0+17iGATAGAGTCTCACTCTGTCAGCA-13.52GATGGAGTCTCACTCTGTCAGCA-12.61
ESCAediting_1191365chr17_39713151_+39713151:397131733SS0+20iAGAGTCTCACTCTGTCAGCAGGC-26.69GGAGTCTCACTCTGTCAGCAGGC-26.99
MEX_1CAediting_1191365chr17_39713151_+39713148:397131703SS0+17iGATAGAGTCTCACTCTGTCAGCA-13.52GATGGAGTCTCACTCTGTCAGCA-12.61
MEX_1CAediting_1191365chr17_39713151_+39713151:397131733SS0+20iAGAGTCTCACTCTGTCAGCAGGC-26.69GGAGTCTCACTCTGTCAGCAGGC-26.99
ESCAediting_1191366chr17_39713153_+39713132:397131543SS2+0iTCATTTTATTTTTTGAGATAGAG-15.66TCATTTTATTTTTTGAGATAGGG-15.65
ESCAediting_1191366chr17_39713153_+39713148:397131703SS0+15iGATAGAGTCTCACTCTGTCAGCA-13.52GATAGGGTCTCACTCTGTCAGCA-11.56
ESCAediting_1191366chr17_39713153_+39713151:397131733SS0+18iAGAGTCTCACTCTGTCAGCAGGC-26.69AGGGTCTCACTCTGTCAGCAGGC-26.01
MEX_1CAediting_1191366chr17_39713153_+39713148:397131703SS0+15iGATAGAGTCTCACTCTGTCAGCA-13.52GATAGGGTCTCACTCTGTCAGCA-11.56
MEX_1CAediting_1191366chr17_39713153_+39713151:397131733SS0+18iAGAGTCTCACTCTGTCAGCAGGC-26.69AGGGTCTCACTCTGTCAGCAGGC-26.01
ESCAediting_1191367chr17_39713167_+39713148:397131703SS0+1iGATAGAGTCTCACTCTGTCAGCA-13.52GATAGAGTCTCACTCTGTCGGCA-4.77
ESCAediting_1191367chr17_39713167_+39713151:397131733SS0+4iAGAGTCTCACTCTGTCAGCAGGC-26.69AGAGTCTCACTCTGTCGGCAGGC-27.3
MEX_1CAediting_1191367chr17_39713167_+39713148:397131703SS0+1iGATAGAGTCTCACTCTGTCAGCA-13.52GATAGAGTCTCACTCTGTCGGCA-4.77
MEX_1CAediting_1191367chr17_39713167_+39713151:397131733SS0+4iAGAGTCTCACTCTGTCAGCAGGC-26.69AGAGTCTCACTCTGTCGGCAGGC-27.3
ESCAediting_1191530chr17_39721958_+39721943:397219653SS0+5iCATTTTGCTGTTGTTACCCAGGC-8.69CATTTTGCTGTTGTTGCCCAGGC-9.7
ESCAediting_1191606chr17_39726156_+39726150:397261585SS0+4iATAGTGAGA1.69ATAGTGGGA-4.82

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000141736.12.ERBB2.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000141736.12.ERBB2.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ERBB2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ERBB2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for ERBB2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000141736.12ENST00000578373hsa-miR-605-3p39727493397274997mer-m83972747939727500140-14.29
CAediting_604450chr7_133034877_-ENSG00000141736.12ENST00000584601hsa-miR-365439728222397282287mer-m83972821139728229140-19.31
CAediting_604450chr7_133034877_-ENSG00000141736.12ENST00000406381hsa-miR-365439728222397282287mer-m83972821139728229140-19.31
CAediting_604450chr7_133034877_-ENSG00000141736.12ENST00000541774hsa-miR-365439728222397282287mer-m83972821139728229140-19.31
CAediting_86358chr1_109598906_+ENSG00000141736.12ENST00000584450hsa-miR-197-5p39727971397279788mer-1a3972795639727978145-22.07
CAediting_1368054chr19_46709310_-ENSG00000141736.12ENST00000582648hsa-miR-320e39715874397158807mer-m83971586439715881146-19.23
CAediting_1368054chr19_46709310_-ENSG00000141736.12ENST00000578373hsa-miR-320e39708409397084157mer-m83970839939708416150-19.91
CAediting_1368054chr19_46709310_-ENSG00000141736.12ENST00000578373hsa-miR-320e39709354397093607mer-m83970934439709361145-18.33
CAediting_1368054chr19_46709310_-ENSG00000141736.12ENST00000578373hsa-miR-320e39715874397158807mer-m83971586439715881146-19.23
CAediting_77128chr1_85133844_+ENSG00000141736.12ENST00000578373hsa-miR-4423-3p39717341397173477mer-m83971732839717348140-13.97
CAediting_1229414chr17_67471546_+ENSG00000141736.12ENST00000578373hsa-miR-548aa39723365397233717mer-m83972334839723372154-16.7
CAediting_1229414chr17_67471546_+ENSG00000141736.12ENST00000578373hsa-miR-548aa39723365397233717mer-m83972336039723384146-20.41
CAediting_1229414chr17_67471546_+ENSG00000141736.12ENST00000578373hsa-miR-548aa39723377397233837mer-m83972336039723384146-20.41
CAediting_1351755chr19_40282625_-ENSG00000141736.12ENST00000578373hsa-miR-64139724759397247657mer-m83972474139724766156-22.29
CAediting_1054808chr15_66496985_-ENSG00000141736.12ENST00000578373hsa-miR-451239727340397273467mer-m83972732839727347150-21.09
CAediting_86358chr1_109598906_+ENSG00000141736.12ENST00000578373hsa-miR-197-5p39727971397279788mer-1a3972795639727978145-22.07
CAediting_604450chr7_133034877_-ENSG00000141736.12ENST00000578373hsa-miR-365439728222397282287mer-m83972821139728229140-19.31
CAediting_1524209chrX_134546392_-ENSG00000141736.12ENST00000584450hsa-miR-503-5p39727750397277556mer3972773439727756143-23.28
CAediting_1524209chrX_134546392_-ENSG00000141736.12ENST00000578373hsa-miR-503-5p39717376397173827mer-m83971736139717383150-27.57
CAediting_1524209chrX_134546392_-ENSG00000141736.12ENST00000578373hsa-miR-503-5p39727750397277556mer3972773439727756143-23.28

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_604450chr7_133034877_-ENSG00000141736.12ENST00000584601hsa-miR-365439728298397283047mer-m83972828739728305140-16.47
CAediting_604450chr7_133034877_-ENSG00000141736.12ENST00000406381hsa-miR-365439728298397283047mer-m83972828739728305140-16.47
CAediting_604450chr7_133034877_-ENSG00000141736.12ENST00000541774hsa-miR-365439728298397283047mer-m83972828739728305140-16.47
CAediting_748296chr10_51299626_+ENSG00000141736.12ENST00000584450hsa-miR-605-3p39727908397279158mer-1a3972789439727915151-12.68
CAediting_604450chr7_133034877_-ENSG00000141736.12ENST00000578373hsa-miR-365439728298397283047mer-m83972828739728305140-16.47
CAediting_1054808chr15_66496985_-ENSG00000141736.12ENST00000578373hsa-miR-451239728273397282797mer-m83972826139728280154-25.47
CAediting_748296chr10_51299626_+ENSG00000141736.12ENST00000578373hsa-miR-605-3p39727908397279158mer-1a3972789439727915151-12.68

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ERBB2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for ERBB2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_1191366chr17_39713153_+..0.04007883085510190.291365842864826..
STADCAediting_1191369chr17_39713227_+..0.01298940650530680.276637219967749..
STADCAediting_1191410chr17_39713931_+..0.04464988484584140.279665819949952..
BRCACAediting_1191467chr17_39718940_+0.03019482743410060.30089224180872....
BRCACAediting_1191530chr17_39721958_+0.03557188042420980.269677616025401....
BRCACAediting_1191580chr17_39722443_+..0.02626367781586520.203725965478019..
BRCACAediting_1191600chr17_39722991_+0.02424154257387830.233571206465794..0.03417114876742620.219909142403606

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Relation with cancer stages for ERBB2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for ERBB2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for ERBB2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
ERBB2P04626DB06366PertuzumabReceptor tyrosine-protein kinase erbB-2 BiotechDrugapproved
ERBB2P04626DB08916AfatinibReceptor tyrosine-protein kinase erbB-2 SmallMoleculeDrugapproved
ERBB2P04626DB00072TrastuzumabReceptor tyrosine-protein kinase erbB-2 BiotechDrugapproved|investigational
ERBB2P04626DB01259LapatinibReceptor tyrosine-protein kinase erbB-2 SmallMoleculeDrugapproved|investigational
ERBB2P04626DB05773Trastuzumab emtansineReceptor tyrosine-protein kinase erbB-2 BiotechDrugapproved|investigational
ERBB2P04626DB11652TucatinibReceptor tyrosine-protein kinase erbB-2 SmallMoleculeDrugapproved|investigational
ERBB2P04626DB12010FostamatinibReceptor tyrosine-protein kinase erbB-2 SmallMoleculeDrugapproved|investigational
ERBB2P04626DB12267BrigatinibReceptor tyrosine-protein kinase erbB-2 SmallMoleculeDrugapproved|investigational
ERBB2P04626DB15035ZanubrutinibReceptor tyrosine-protein kinase erbB-2 SmallMoleculeDrugapproved|investigational

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RelatedDiseases for ERBB2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
ERBB2C0006142Malignant neoplasm of breast40CGI;CTD_human
ERBB2C0678222Breast Carcinoma40CGI;CTD_human
ERBB2C1257931Mammary Neoplasms, Human40CTD_human
ERBB2C1458155Mammary Neoplasms40CTD_human
ERBB2C4704874Mammary Carcinoma, Human40CTD_human
ERBB2C1140680Malignant neoplasm of ovary4CGI;CTD_human;UNIPROT
ERBB2C0024623Malignant neoplasm of stomach3CGI;CTD_human
ERBB2C0033578Prostatic Neoplasms3CTD_human
ERBB2C0038356Stomach Neoplasms3CGI;CTD_human
ERBB2C0235874Disease Exacerbation3CTD_human
ERBB2C0376358Malignant neoplasm of prostate3CTD_human
ERBB2C1708349Hereditary Diffuse Gastric Cancer3CTD_human
ERBB2C0001418Adenocarcinoma2CTD_human
ERBB2C0024668Mammary Neoplasms, Experimental2CTD_human
ERBB2C0205641Adenocarcinoma, Basal Cell2CTD_human
ERBB2C0205642Adenocarcinoma, Oxyphilic2CTD_human
ERBB2C0205643Carcinoma, Cribriform2CTD_human
ERBB2C0205644Carcinoma, Granular Cell2CTD_human
ERBB2C0205645Adenocarcinoma, Tubular2CTD_human
ERBB2C0699791Stomach Carcinoma2CGI;UNIPROT
ERBB2C0919267ovarian neoplasm2CGI;CTD_human
ERBB2C0007102Malignant tumor of colon1CTD_human
ERBB2C0007134Renal Cell Carcinoma1CTD_human
ERBB2C0009375Colonic Neoplasms1CTD_human
ERBB2C0013930Embolism, Tumor1CTD_human
ERBB2C0014859Esophageal Neoplasms1CTD_human
ERBB2C0016978gallbladder neoplasm1CTD_human
ERBB2C0017185Gastrointestinal Neoplasms1CTD_human
ERBB2C0021367Mammary Ductal Carcinoma1CTD_human
ERBB2C0024121Lung Neoplasms1CTD_human
ERBB2C0024232Lymphatic Metastasis1CTD_human
ERBB2C0024667Animal Mammary Neoplasms1CTD_human
ERBB2C0025149Medulloblastoma1CTD_human
ERBB2C0027627Neoplasm Metastasis1CTD_human
ERBB2C0027643Neoplasm Recurrence, Local1CTD_human
ERBB2C0027659Neoplasms, Experimental1CTD_human
ERBB2C0030354Papilloma1CTD_human
ERBB2C0153452Malignant neoplasm of gallbladder1CTD_human
ERBB2C0205833Medullomyoblastoma1CTD_human
ERBB2C0205874Papilloma, Squamous Cell1CTD_human
ERBB2C0205875Papillomatosis1CTD_human
ERBB2C0206698Cholangiocarcinoma1CTD_human
ERBB2C0242379Malignant neoplasm of lung1CTD_human
ERBB2C0278510Childhood Medulloblastoma1CTD_human
ERBB2C0278876Adult Medulloblastoma1CTD_human
ERBB2C0279702Conventional (Clear Cell) Renal Cell Carcinoma1CTD_human
ERBB2C0345905Intrahepatic Cholangiocarcinoma1CTD_human
ERBB2C0546837Malignant neoplasm of esophagus1CTD_human
ERBB2C0596263Carcinogenesis1CTD_human
ERBB2C0684249Carcinoma of lung1UNIPROT
ERBB2C0685938Malignant neoplasm of gastrointestinal tract1CTD_human
ERBB2C0751291Desmoplastic Medulloblastoma1CTD_human
ERBB2C1134719Invasive Ductal Breast Carcinoma1CTD_human
ERBB2C1257925Mammary Carcinoma, Animal1CTD_human
ERBB2C1266042Chromophobe Renal Cell Carcinoma1CTD_human
ERBB2C1266043Sarcomatoid Renal Cell Carcinoma1CTD_human
ERBB2C1266044Collecting Duct Carcinoma of the Kidney1CTD_human
ERBB2C1275668Melanotic medulloblastoma1CTD_human
ERBB2C1306837Papillary Renal Cell Carcinoma1CTD_human
ERBB2C1368275Pigmented Basal Cell Carcinoma1CTD_human
ERBB2C2750850GLIOMA SUSCEPTIBILITY 11UNIPROT
ERBB2C2931822Nasopharyngeal carcinoma1CTD_human
ERBB2C3805278Extrahepatic Cholangiocarcinoma1CTD_human
ERBB2C4721610Carcinoma, Ovarian Epithelial1CTD_human
ERBB2C4721806Carcinoma, Basal Cell1CTD_human