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Editing gene: STX2 (CAeditome ID:2054)

Gene summary for STX2

Gene summary

Gene information	Gene symbol	STX2
	Gene ID	2054
	Gene name	syntaxin 2
	Synonyms	EPIM\|EPM\|STX2A\|STX2B\|STX2C
	Cytomap	12q24.33
	Type of gene	protein-coding
	Description	syntaxin-2epimorphin
	Modification date	20210518
	UniProtAcc	P32856
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
STX2	GO:0005198	Syntaxin-2	22226963
STX2	GO:0034599	Syntaxin-2	22226963
STX2	GO:1903575	Syntaxin-2	22226963
STX2	GO:0005615	Syntaxin-2	22226963
STX2	GO:0005886	Syntaxin-2	21720706
STX2	GO:0016323	Syntaxin-2	16339081
STX2	GO:0030027	Syntaxin-2	21720706
STX2	GO:0032991	Syntaxin-2	22226963

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RNA A-to-I events for STX2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000111450.12

RNA A-to-I editing events in Cancer.

CAediting_947555(130791226, -), CAediting_947556(130791265, -), CAediting_947557(130791277, -), CAediting_947558(130791278, -), CAediting_947559(130791279, -), CAediting_947560(130791287, -), CAediting_947561(130791292, -), CAediting_947562(130791296, -), CAediting_947563(130791308, -), CAediting_947564(130791315, -), CAediting_947565(130791316, -), CAediting_947566(130791317, -), CAediting_947567(130791337, -), CAediting_947568(130791340, -), CAediting_947569(130791350, -), CAediting_947570(130791352, -), CAediting_947571(130791354, -), CAediting_947572(130791357, -), CAediting_947573(130791378, -), CAediting_947574(130791402, -), CAediting_947575(130791404, -), CAediting_947576(130791414, -), CAediting_947577(130791426, -), CAediting_947578(130791443, -), CAediting_947579(130791444, -), CAediting_947580(130791474, -), CAediting_947581(130791493, -), CAediting_947582(130791524, -), CAediting_947583(130792556, -), CAediting_947584(130792692, -), CAediting_947585(130794574, -), CAediting_947586(130794629, -), CAediting_947587(130794635, -), CAediting_947588(130796242, -), CAediting_947589(130796249, -), CAediting_947590(130800355, -), CAediting_947591(130800363, -), CAediting_947592(130800373, -), CAediting_947593(130800399, -), CAediting_947594(130802190, -), CAediting_947595(130802197, -), CAediting_947596(130802198, -), CAediting_947597(130802213, -), CAediting_947598(130802225, -), CAediting_947599(130802227, -), CAediting_947600(130802231, -), CAediting_947601(130802233, -), CAediting_947602(130802245, -), CAediting_947603(130802250, -), CAediting_947604(130802274, -), CAediting_947605(130802294, -), CAediting_947606(130802295, -), CAediting_947607(130802303, -), CAediting_947608(130802304, -), CAediting_947609(130802306, -), CAediting_947610(130802313, -), CAediting_947611(130802315, -), CAediting_947612(130802326, -), CAediting_947613(130802329, -), CAediting_947614(130802336, -), CAediting_947615(130802344, -), CAediting_947616(130802373, -), CAediting_947617(130802374, -), CAediting_947618(130802375, -), CAediting_947619(130802376, -), CAediting_947620(130802380, -), CAediting_947621(130802391, -), CAediting_947622(130802392, -), CAediting_947623(130802400, -), CAediting_947624(130802401, -), CAediting_947625(130802402, -), CAediting_947626(130802411, -), CAediting_947627(130802425, -), CAediting_947628(130802430, -), CAediting_947629(130802435, -), CAediting_947630(130802440, -), CAediting_947631(130802462, -), CAediting_947632(130802465, -), CAediting_947633(130802471, -), CAediting_947634(130802477, -), CAediting_947635(130802479, -), CAediting_947636(130802501, -), CAediting_947637(130802502, -), CAediting_947638(130802503, -), CAediting_947639(130802505, -), CAediting_947640(130802506, -), CAediting_947641(130802507, -), CAediting_947642(130802508, -), CAediting_947643(130802550, -), CAediting_947644(130802580, -), CAediting_947645(130802595, -), CAediting_947646(130802606, -), CAediting_947647(130802609, -), CAediting_947648(130802619, -), CAediting_947649(130802635, -), CAediting_947650(130802636, -), CAediting_947651(130802660, -), CAediting_947652(130802664, -), CAediting_947653(130802666, -), CAediting_947654(130802667, -), CAediting_947655(130802670, -), CAediting_947656(130802671, -), CAediting_947657(130802673, -), CAediting_947658(130802674, -), CAediting_947659(130802675, -), CAediting_947660(130802685, -), CAediting_947661(130802691, -), CAediting_947662(130802692, -), CAediting_947663(130802696, -), CAediting_947664(130802698, -), CAediting_947665(130802700, -), CAediting_947666(130802709, -), CAediting_947667(130802714, -), CAediting_947668(130802715, -), CAediting_947669(130802723, -), CAediting_947670(130802728, -), CAediting_947671(130802739, -), CAediting_947672(130802740, -), CAediting_947673(130802746, -), CAediting_947674(130802747, -), CAediting_947675(130802751, -), CAediting_947676(130802752, -), CAediting_947677(130802799, -), CAediting_947678(130803212, -), CAediting_947679(130803234, -), CAediting_947680(130803235, -), CAediting_947681(130803256, -), CAediting_947682(130803271, -), CAediting_947683(130803280, -), CAediting_947684(130803283, -), CAediting_947685(130803284, -), CAediting_947686(130803290, -), CAediting_947687(130803296, -), CAediting_947688(130803297, -), CAediting_947689(130803298, -), CAediting_947690(130803304, -), CAediting_947691(130803309, -), CAediting_947692(130803329, -), CAediting_947693(130803331, -), CAediting_947694(130803333, -), CAediting_947695(130803344, -), CAediting_947696(130803355, -), CAediting_947697(130803399, -), CAediting_947698(130803470, -), CAediting_947699(130803497, -), CAediting_947700(130803502, -), CAediting_947701(130803513, -), CAediting_947702(130803518, -), CAediting_947703(130803519, -), CAediting_947704(130803527, -), CAediting_947705(130803529, -), CAediting_947706(130803535, -), CAediting_947707(130803541, -), CAediting_947708(130803548, -), CAediting_947709(130803555, -), CAediting_947710(130803567, -), CAediting_947711(130803572, -), CAediting_947712(130803580, -), CAediting_947713(130803584, -), CAediting_947714(130803585, -), CAediting_947715(130803597, -), CAediting_947716(130803653, -), CAediting_947717(130803659, -), CAediting_947718(130803661, -), CAediting_947719(130803663, -), CAediting_947720(130803665, -), CAediting_947721(130808952, -), CAediting_947722(130808964, -), CAediting_947723(130809935, -), CAediting_947724(130809951, -), CAediting_947725(130815031, -), CAediting_947726(130825175, -), CAediting_947727(130825185, -), CAediting_947728(130825197, -), CAediting_947729(130828365, -), CAediting_947730(130828512, -), CAediting_947731(130828513, -),

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RNA editing positional annotations for STX2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_947555	chr12_130791226_-	UTR3
CAediting_947556	chr12_130791265_-	UTR3
CAediting_947557	chr12_130791277_-	UTR3
CAediting_947558	chr12_130791278_-	UTR3
CAediting_947559	chr12_130791279_-	UTR3
CAediting_947560	chr12_130791287_-	UTR3
CAediting_947561	chr12_130791292_-	UTR3
CAediting_947562	chr12_130791296_-	UTR3
CAediting_947563	chr12_130791308_-	UTR3
CAediting_947564	chr12_130791315_-	UTR3
CAediting_947565	chr12_130791316_-	UTR3
CAediting_947566	chr12_130791317_-	UTR3
CAediting_947567	chr12_130791337_-	UTR3
CAediting_947568	chr12_130791340_-	UTR3
CAediting_947569	chr12_130791350_-	UTR3
CAediting_947570	chr12_130791352_-	UTR3
CAediting_947571	chr12_130791354_-	UTR3
CAediting_947572	chr12_130791357_-	UTR3
CAediting_947573	chr12_130791378_-	UTR3
CAediting_947574	chr12_130791402_-	UTR3
CAediting_947575	chr12_130791404_-	UTR3
CAediting_947576	chr12_130791414_-	UTR3
CAediting_947577	chr12_130791426_-	UTR3
CAediting_947578	chr12_130791443_-	UTR3
CAediting_947579	chr12_130791444_-	UTR3
CAediting_947580	chr12_130791474_-	UTR3
CAediting_947581	chr12_130791493_-	UTR3
CAediting_947582	chr12_130791524_-	UTR3
CAediting_947583	chr12_130792556_-	intronic
CAediting_947584	chr12_130792692_-	intronic
CAediting_947585	chr12_130794574_-	intronic
CAediting_947586	chr12_130794629_-	intronic
CAediting_947587	chr12_130794635_-	intronic
CAediting_947588	chr12_130796242_-	intronic
CAediting_947589	chr12_130796249_-	intronic
CAediting_947590	chr12_130800355_-	ncRNA_intronic
CAediting_947591	chr12_130800363_-	ncRNA_intronic
CAediting_947592	chr12_130800373_-	ncRNA_intronic
CAediting_947593	chr12_130800399_-	ncRNA_intronic
CAediting_947594	chr12_130802190_-	intronic
CAediting_947595	chr12_130802197_-	intronic
CAediting_947596	chr12_130802198_-	intronic
CAediting_947597	chr12_130802213_-	intronic
CAediting_947598	chr12_130802225_-	intronic
CAediting_947599	chr12_130802227_-	intronic
CAediting_947600	chr12_130802231_-	intronic
CAediting_947601	chr12_130802233_-	intronic
CAediting_947602	chr12_130802245_-	intronic
CAediting_947603	chr12_130802250_-	intronic
CAediting_947604	chr12_130802274_-	intronic
CAediting_947605	chr12_130802294_-	intronic
CAediting_947606	chr12_130802295_-	intronic
CAediting_947607	chr12_130802303_-	intronic
CAediting_947608	chr12_130802304_-	intronic
CAediting_947609	chr12_130802306_-	intronic
CAediting_947610	chr12_130802313_-	intronic
CAediting_947611	chr12_130802315_-	intronic
CAediting_947612	chr12_130802326_-	intronic
CAediting_947613	chr12_130802329_-	intronic
CAediting_947614	chr12_130802336_-	intronic
CAediting_947615	chr12_130802344_-	intronic
CAediting_947616	chr12_130802373_-	intronic
CAediting_947617	chr12_130802374_-	intronic
CAediting_947618	chr12_130802375_-	intronic
CAediting_947619	chr12_130802376_-	intronic
CAediting_947620	chr12_130802380_-	intronic
CAediting_947621	chr12_130802391_-	intronic
CAediting_947622	chr12_130802392_-	intronic
CAediting_947623	chr12_130802400_-	intronic
CAediting_947624	chr12_130802401_-	intronic
CAediting_947625	chr12_130802402_-	intronic
CAediting_947626	chr12_130802411_-	intronic
CAediting_947627	chr12_130802425_-	intronic
CAediting_947628	chr12_130802430_-	intronic
CAediting_947629	chr12_130802435_-	intronic
CAediting_947630	chr12_130802440_-	intronic
CAediting_947631	chr12_130802462_-	intronic
CAediting_947632	chr12_130802465_-	intronic
CAediting_947633	chr12_130802471_-	intronic
CAediting_947634	chr12_130802477_-	intronic
CAediting_947635	chr12_130802479_-	intronic
CAediting_947636	chr12_130802501_-	intronic
CAediting_947637	chr12_130802502_-	intronic
CAediting_947638	chr12_130802503_-	intronic
CAediting_947639	chr12_130802505_-	intronic
CAediting_947640	chr12_130802506_-	intronic
CAediting_947641	chr12_130802507_-	intronic
CAediting_947642	chr12_130802508_-	intronic
CAediting_947643	chr12_130802550_-	intronic
CAediting_947644	chr12_130802580_-	intronic
CAediting_947645	chr12_130802595_-	intronic
CAediting_947646	chr12_130802606_-	intronic
CAediting_947647	chr12_130802609_-	intronic
CAediting_947648	chr12_130802619_-	intronic
CAediting_947649	chr12_130802635_-	intronic
CAediting_947650	chr12_130802636_-	intronic
CAediting_947651	chr12_130802660_-	intronic
CAediting_947652	chr12_130802664_-	intronic
CAediting_947653	chr12_130802666_-	intronic
CAediting_947654	chr12_130802667_-	intronic
CAediting_947655	chr12_130802670_-	intronic
CAediting_947656	chr12_130802671_-	intronic
CAediting_947657	chr12_130802673_-	intronic
CAediting_947658	chr12_130802674_-	intronic
CAediting_947659	chr12_130802675_-	intronic
CAediting_947660	chr12_130802685_-	intronic
CAediting_947661	chr12_130802691_-	intronic
CAediting_947662	chr12_130802692_-	intronic
CAediting_947663	chr12_130802696_-	intronic
CAediting_947664	chr12_130802698_-	intronic
CAediting_947665	chr12_130802700_-	intronic
CAediting_947666	chr12_130802709_-	intronic
CAediting_947667	chr12_130802714_-	intronic
CAediting_947668	chr12_130802715_-	intronic
CAediting_947669	chr12_130802723_-	intronic
CAediting_947670	chr12_130802728_-	intronic
CAediting_947671	chr12_130802739_-	intronic
CAediting_947672	chr12_130802740_-	intronic
CAediting_947673	chr12_130802746_-	intronic
CAediting_947674	chr12_130802747_-	intronic
CAediting_947675	chr12_130802751_-	intronic
CAediting_947676	chr12_130802752_-	intronic
CAediting_947677	chr12_130802799_-	intronic
CAediting_947678	chr12_130803212_-	intronic
CAediting_947679	chr12_130803234_-	intronic
CAediting_947680	chr12_130803235_-	intronic
CAediting_947681	chr12_130803256_-	intronic
CAediting_947682	chr12_130803271_-	intronic
CAediting_947683	chr12_130803280_-	intronic
CAediting_947684	chr12_130803283_-	intronic
CAediting_947685	chr12_130803284_-	intronic
CAediting_947686	chr12_130803290_-	intronic
CAediting_947687	chr12_130803296_-	intronic
CAediting_947688	chr12_130803297_-	intronic
CAediting_947689	chr12_130803298_-	intronic
CAediting_947690	chr12_130803304_-	intronic
CAediting_947691	chr12_130803309_-	intronic
CAediting_947692	chr12_130803329_-	intronic
CAediting_947693	chr12_130803331_-	intronic
CAediting_947694	chr12_130803333_-	intronic
CAediting_947695	chr12_130803344_-	intronic
CAediting_947696	chr12_130803355_-	intronic
CAediting_947697	chr12_130803399_-	intronic
CAediting_947698	chr12_130803470_-	intronic
CAediting_947699	chr12_130803497_-	intronic
CAediting_947700	chr12_130803502_-	intronic
CAediting_947701	chr12_130803513_-	intronic
CAediting_947702	chr12_130803518_-	intronic
CAediting_947703	chr12_130803519_-	intronic
CAediting_947704	chr12_130803527_-	intronic
CAediting_947705	chr12_130803529_-	intronic
CAediting_947706	chr12_130803535_-	intronic
CAediting_947707	chr12_130803541_-	intronic
CAediting_947708	chr12_130803548_-	intronic
CAediting_947709	chr12_130803555_-	intronic
CAediting_947710	chr12_130803567_-	intronic
CAediting_947711	chr12_130803572_-	intronic
CAediting_947712	chr12_130803580_-	intronic
CAediting_947713	chr12_130803584_-	intronic
CAediting_947714	chr12_130803585_-	intronic
CAediting_947715	chr12_130803597_-	intronic
CAediting_947716	chr12_130803653_-	intronic
CAediting_947717	chr12_130803659_-	intronic
CAediting_947718	chr12_130803661_-	intronic
CAediting_947719	chr12_130803663_-	intronic
CAediting_947720	chr12_130803665_-	intronic
CAediting_947721	chr12_130808952_-	intronic
CAediting_947722	chr12_130808964_-	intronic
CAediting_947723	chr12_130809935_-	intronic
CAediting_947724	chr12_130809951_-	intronic
CAediting_947725	chr12_130815031_-	intronic
CAediting_947726	chr12_130825175_-	intronic
CAediting_947727	chr12_130825185_-	intronic
CAediting_947728	chr12_130825197_-	intronic
CAediting_947729	chr12_130828365_-	intronic
CAediting_947730	chr12_130828512_-	intronic
CAediting_947731	chr12_130828513_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_947556	chr12_130791265_-	SINE	Alu	AluSx3
CAediting_947557	chr12_130791277_-	SINE	Alu	AluSx3
CAediting_947558	chr12_130791278_-	SINE	Alu	AluSx3
CAediting_947559	chr12_130791279_-	SINE	Alu	AluSx3
CAediting_947560	chr12_130791287_-	SINE	Alu	AluSx3
CAediting_947561	chr12_130791292_-	SINE	Alu	AluSx3
CAediting_947562	chr12_130791296_-	SINE	Alu	AluSx3
CAediting_947563	chr12_130791308_-	SINE	Alu	AluSx3
CAediting_947564	chr12_130791315_-	SINE	Alu	AluSx3
CAediting_947565	chr12_130791316_-	SINE	Alu	AluSx3
CAediting_947566	chr12_130791317_-	SINE	Alu	AluSx3
CAediting_947567	chr12_130791337_-	SINE	Alu	AluSx3
CAediting_947568	chr12_130791340_-	SINE	Alu	AluSx3
CAediting_947569	chr12_130791350_-	SINE	Alu	AluSx3
CAediting_947570	chr12_130791352_-	SINE	Alu	AluSx3
CAediting_947571	chr12_130791354_-	SINE	Alu	AluSx3
CAediting_947572	chr12_130791357_-	SINE	Alu	AluSx3
CAediting_947573	chr12_130791378_-	SINE	Alu	AluSx3
CAediting_947574	chr12_130791402_-	SINE	Alu	AluSx3
CAediting_947575	chr12_130791404_-	SINE	Alu	AluSx3
CAediting_947576	chr12_130791414_-	SINE	Alu	AluSx3
CAediting_947577	chr12_130791426_-	SINE	Alu	AluSx3
CAediting_947578	chr12_130791443_-	SINE	Alu	AluSx3
CAediting_947579	chr12_130791444_-	SINE	Alu	AluSx3
CAediting_947580	chr12_130791474_-	SINE	Alu	AluSx3
CAediting_947581	chr12_130791493_-	SINE	Alu	AluSx3
CAediting_947582	chr12_130791524_-	SINE	Alu	AluSx3
CAediting_947583	chr12_130792556_-	SINE	Alu	AluJr
CAediting_947584	chr12_130792692_-	SINE	Alu	AluJr
CAediting_947585	chr12_130794574_-	SINE	Alu	AluJb
CAediting_947586	chr12_130794629_-	SINE	Alu	AluJb
CAediting_947587	chr12_130794635_-	SINE	Alu	AluJb
CAediting_947588	chr12_130796242_-	SINE	Alu	AluSx
CAediting_947589	chr12_130796249_-	SINE	Alu	AluSx
CAediting_947590	chr12_130800355_-	SINE	Alu	AluJr
CAediting_947591	chr12_130800363_-	SINE	Alu	AluJr
CAediting_947592	chr12_130800373_-	SINE	Alu	AluJr
CAediting_947593	chr12_130800399_-	SINE	Alu	AluJr
CAediting_947594	chr12_130802190_-	SINE	Alu	AluSz
CAediting_947595	chr12_130802197_-	SINE	Alu	AluSz
CAediting_947596	chr12_130802198_-	SINE	Alu	AluSz
CAediting_947597	chr12_130802213_-	SINE	Alu	AluSz
CAediting_947598	chr12_130802225_-	SINE	Alu	AluSz
CAediting_947599	chr12_130802227_-	SINE	Alu	AluSz
CAediting_947600	chr12_130802231_-	SINE	Alu	AluSz
CAediting_947601	chr12_130802233_-	SINE	Alu	AluSz
CAediting_947602	chr12_130802245_-	SINE	Alu	AluSz
CAediting_947603	chr12_130802250_-	SINE	Alu	AluSz
CAediting_947604	chr12_130802274_-	SINE	Alu	AluSz
CAediting_947605	chr12_130802294_-	SINE	Alu	AluSz
CAediting_947606	chr12_130802295_-	SINE	Alu	AluSz
CAediting_947607	chr12_130802303_-	SINE	Alu	AluSz
CAediting_947608	chr12_130802304_-	SINE	Alu	AluSz
CAediting_947609	chr12_130802306_-	SINE	Alu	AluSz
CAediting_947610	chr12_130802313_-	SINE	Alu	AluSz
CAediting_947611	chr12_130802315_-	SINE	Alu	AluSz
CAediting_947612	chr12_130802326_-	SINE	Alu	AluSz
CAediting_947613	chr12_130802329_-	SINE	Alu	AluSz
CAediting_947614	chr12_130802336_-	SINE	Alu	AluSz
CAediting_947615	chr12_130802344_-	SINE	Alu	AluSz
CAediting_947616	chr12_130802373_-	SINE	Alu	AluSz
CAediting_947617	chr12_130802374_-	SINE	Alu	AluSz
CAediting_947618	chr12_130802375_-	SINE	Alu	AluSz
CAediting_947619	chr12_130802376_-	SINE	Alu	AluSz
CAediting_947620	chr12_130802380_-	SINE	Alu	AluSz
CAediting_947621	chr12_130802391_-	SINE	Alu	AluSz
CAediting_947622	chr12_130802392_-	SINE	Alu	AluSz
CAediting_947623	chr12_130802400_-	SINE	Alu	AluSz
CAediting_947624	chr12_130802401_-	SINE	Alu	AluSz
CAediting_947625	chr12_130802402_-	SINE	Alu	AluSz
CAediting_947626	chr12_130802411_-	SINE	Alu	AluSz
CAediting_947627	chr12_130802425_-	SINE	Alu	AluSz
CAediting_947628	chr12_130802430_-	SINE	Alu	AluSz
CAediting_947629	chr12_130802435_-	SINE	Alu	AluSz
CAediting_947630	chr12_130802440_-	SINE	Alu	AluSz
CAediting_947631	chr12_130802462_-	SINE	Alu	AluSz
CAediting_947632	chr12_130802465_-	SINE	Alu	AluSz
CAediting_947633	chr12_130802471_-	SINE	Alu	AluSz
CAediting_947634	chr12_130802477_-	SINE	Alu	AluSz
CAediting_947635	chr12_130802479_-	SINE	Alu	AluSz
CAediting_947636	chr12_130802501_-	SINE	Alu	AluJr
CAediting_947637	chr12_130802502_-	SINE	Alu	AluJr
CAediting_947638	chr12_130802503_-	SINE	Alu	AluJr
CAediting_947639	chr12_130802505_-	SINE	Alu	AluJr
CAediting_947640	chr12_130802506_-	SINE	Alu	AluJr
CAediting_947641	chr12_130802507_-	SINE	Alu	AluJr
CAediting_947642	chr12_130802508_-	SINE	Alu	AluJr
CAediting_947643	chr12_130802550_-	SINE	Alu	AluJr
CAediting_947644	chr12_130802580_-	SINE	Alu	AluJr
CAediting_947645	chr12_130802595_-	SINE	Alu	AluJr
CAediting_947646	chr12_130802606_-	SINE	Alu	AluJr
CAediting_947647	chr12_130802609_-	SINE	Alu	AluJr
CAediting_947648	chr12_130802619_-	SINE	Alu	AluJr
CAediting_947649	chr12_130802635_-	SINE	Alu	AluJr
CAediting_947650	chr12_130802636_-	SINE	Alu	AluJr
CAediting_947651	chr12_130802660_-	SINE	Alu	AluJr
CAediting_947652	chr12_130802664_-	SINE	Alu	AluJr
CAediting_947653	chr12_130802666_-	SINE	Alu	AluJr
CAediting_947654	chr12_130802667_-	SINE	Alu	AluJr
CAediting_947655	chr12_130802670_-	SINE	Alu	AluJr
CAediting_947656	chr12_130802671_-	SINE	Alu	AluJr
CAediting_947657	chr12_130802673_-	SINE	Alu	AluJr
CAediting_947658	chr12_130802674_-	SINE	Alu	AluJr
CAediting_947659	chr12_130802675_-	SINE	Alu	AluJr
CAediting_947660	chr12_130802685_-	SINE	Alu	AluJr
CAediting_947661	chr12_130802691_-	SINE	Alu	AluJr
CAediting_947662	chr12_130802692_-	SINE	Alu	AluJr
CAediting_947663	chr12_130802696_-	SINE	Alu	AluJr
CAediting_947664	chr12_130802698_-	SINE	Alu	AluJr
CAediting_947665	chr12_130802700_-	SINE	Alu	AluJr
CAediting_947666	chr12_130802709_-	SINE	Alu	AluJr
CAediting_947667	chr12_130802714_-	SINE	Alu	AluJr
CAediting_947668	chr12_130802715_-	SINE	Alu	AluJr
CAediting_947669	chr12_130802723_-	SINE	Alu	AluJr
CAediting_947670	chr12_130802728_-	SINE	Alu	AluJr
CAediting_947671	chr12_130802739_-	SINE	Alu	AluJr
CAediting_947672	chr12_130802740_-	SINE	Alu	AluJr
CAediting_947673	chr12_130802746_-	SINE	Alu	AluJr
CAediting_947674	chr12_130802747_-	SINE	Alu	AluJr
CAediting_947675	chr12_130802751_-	SINE	Alu	AluJr
CAediting_947676	chr12_130802752_-	SINE	Alu	AluJr
CAediting_947677	chr12_130802799_-	SINE	Alu	AluJr
CAediting_947679	chr12_130803234_-	SINE	Alu	AluJr
CAediting_947680	chr12_130803235_-	SINE	Alu	AluJr
CAediting_947681	chr12_130803256_-	SINE	Alu	AluJr
CAediting_947682	chr12_130803271_-	SINE	Alu	AluJr
CAediting_947683	chr12_130803280_-	SINE	Alu	AluJr
CAediting_947684	chr12_130803283_-	SINE	Alu	AluJr
CAediting_947685	chr12_130803284_-	SINE	Alu	AluJr
CAediting_947686	chr12_130803290_-	SINE	Alu	AluJr
CAediting_947687	chr12_130803296_-	SINE	Alu	AluJr
CAediting_947688	chr12_130803297_-	SINE	Alu	AluJr
CAediting_947689	chr12_130803298_-	SINE	Alu	AluJr
CAediting_947690	chr12_130803304_-	SINE	Alu	AluJr
CAediting_947691	chr12_130803309_-	SINE	Alu	AluJr
CAediting_947692	chr12_130803329_-	SINE	Alu	AluJr
CAediting_947693	chr12_130803331_-	SINE	Alu	AluJr
CAediting_947694	chr12_130803333_-	SINE	Alu	AluJr
CAediting_947695	chr12_130803344_-	SINE	Alu	AluJr
CAediting_947699	chr12_130803497_-	SINE	Alu	AluJr
CAediting_947700	chr12_130803502_-	SINE	Alu	AluJr
CAediting_947701	chr12_130803513_-	SINE	Alu	AluJr
CAediting_947702	chr12_130803518_-	SINE	Alu	AluJr
CAediting_947703	chr12_130803519_-	SINE	Alu	AluJr
CAediting_947704	chr12_130803527_-	SINE	Alu	AluJr
CAediting_947705	chr12_130803529_-	SINE	Alu	AluJr
CAediting_947706	chr12_130803535_-	SINE	Alu	AluJr
CAediting_947707	chr12_130803541_-	SINE	Alu	AluJr
CAediting_947708	chr12_130803548_-	SINE	Alu	AluJr
CAediting_947709	chr12_130803555_-	SINE	Alu	AluJr
CAediting_947710	chr12_130803567_-	SINE	Alu	AluJr
CAediting_947711	chr12_130803572_-	SINE	Alu	AluJr
CAediting_947712	chr12_130803580_-	SINE	Alu	AluJr
CAediting_947713	chr12_130803584_-	SINE	Alu	AluJr
CAediting_947714	chr12_130803585_-	SINE	Alu	AluJr
CAediting_947715	chr12_130803597_-	SINE	Alu	AluJr
CAediting_947716	chr12_130803653_-	SINE	Alu	AluJr
CAediting_947717	chr12_130803659_-	SINE	Alu	AluJr
CAediting_947718	chr12_130803661_-	SINE	Alu	AluJr
CAediting_947719	chr12_130803663_-	SINE	Alu	AluJr
CAediting_947720	chr12_130803665_-	SINE	Alu	AluJr
CAediting_947721	chr12_130808952_-	SINE	Alu	AluJb
CAediting_947722	chr12_130808964_-	SINE	Alu	AluJb
CAediting_947723	chr12_130809935_-	SINE	Alu	FAM
CAediting_947724	chr12_130809951_-	SINE	Alu	FAM
CAediting_947725	chr12_130815031_-	SINE	Alu	FLAM_A
CAediting_947726	chr12_130825175_-	SINE	Alu	AluSq
CAediting_947727	chr12_130825185_-	SINE	Alu	AluSq
CAediting_947728	chr12_130825197_-	SINE	Alu	AluSq
CAediting_947729	chr12_130828365_-	SINE	Alu	AluSx1
CAediting_947730	chr12_130828512_-	SINE	Alu	AluSx1
CAediting_947731	chr12_130828513_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for STX2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000111450.12.STX2.

Correlation between RNA A-to-I editing and PSI for ENSG00000111450.12.STX2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for STX2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_947614.ENSG00000111450.STX2.png
Soverview

COAD.CAediting_947666.ENSG00000111450.STX2.png
Soverview

ESCA.CAediting_947614.ENSG00000111450.STX2.png
Soverview

ESCA.CAediting_947629.ENSG00000111450.STX2.png
Soverview

ESCA.CAediting_947684.ENSG00000111450.STX2.png
Soverview

KIRC.CAediting_947666.ENSG00000111450.STX2.png
Soverview

LUSC.CAediting_947716.ENSG00000111450.STX2.png
Soverview

SARC.CAediting_947666.ENSG00000111450.STX2.png
Soverview

SARC.CAediting_947668.ENSG00000111450.STX2.png
Soverview

SKCM.CAediting_947709.ENSG00000111450.STX2.png
Soverview

STAD.CAediting_947690.ENSG00000111450.STX2.png
Soverview

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Protein coding region RNA A-to-I editings for STX2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for STX2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_947556	chr12_130791265_-	ENSG00000111450.12	ENST00000261653	hsa-miR-106a-3p	130791263	130791268	6mer	130791262	130791283	141.00	-21.13
CAediting_947557	chr12_130791277_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3189-3p	130791276	130791282	7mer-m8	130791275	130791298	157.00	-25.36
CAediting_947557	chr12_130791277_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6813-3p	130791275	130791281	7mer-m8	130791274	130791294	140.00	-10.68
CAediting_947558	chr12_130791278_-	ENSG00000111450.12	ENST00000261653	hsa-miR-326	130791276	130791282	7mer-m8	130791275	130791294	140.00	-13.25
CAediting_947558	chr12_130791278_-	ENSG00000111450.12	ENST00000261653	hsa-miR-330-5p	130791276	130791282	7mer-m8	130791275	130791298	141.00	-19.11
CAediting_947558	chr12_130791278_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4314	130791277	130791283	7mer-m8	130791276	130791294	141.00	-20.85
CAediting_947558	chr12_130791278_-	ENSG00000111450.12	ENST00000261653	hsa-miR-514a-5p	130791275	130791281	7mer-m8	130791274	130791297	150.00	-18.62
CAediting_947558	chr12_130791278_-	ENSG00000111450.12	ENST00000261653	hsa-miR-514a-5p	130791275	130791281	7mer-m8	130791274	130791297	150.00	-18.62
CAediting_947558	chr12_130791278_-	ENSG00000111450.12	ENST00000261653	hsa-miR-514a-5p	130791275	130791281	7mer-m8	130791274	130791297	150.00	-18.62
CAediting_947561	chr12_130791292_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6765-5p	130791287	130791293	7mer-m8	130791286	130791313	154.00	-28.08
CAediting_947562	chr12_130791296_-	ENSG00000111450.12	ENST00000261653	hsa-miR-1228-5p	130791292	130791298	7mer-m8	130791291	130791311	147.00	-27.44
CAediting_947563	chr12_130791308_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3922-5p	130791303	130791309	7mer-m8	130791302	130791324	158.00	-22.42
CAediting_947563	chr12_130791308_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4753-5p	130791304	130791310	7mer-m8	130791303	130791325	144.00	-23.34
CAediting_947564	chr12_130791315_-	ENSG00000111450.12	ENST00000261653	hsa-miR-28-5p	130791310	130791316	7mer-m8	130791309	130791329	143.00	-18.76
CAediting_947564	chr12_130791315_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3139	130791310	130791316	7mer-m8	130791309	130791331	149.00	-21.86
CAediting_947564	chr12_130791315_-	ENSG00000111450.12	ENST00000261653	hsa-miR-708-5p	130791310	130791316	7mer-m8	130791309	130791330	154.00	-21.88
CAediting_947565	chr12_130791316_-	ENSG00000111450.12	ENST00000261653	hsa-miR-12119	130791315	130791321	7mer-m8	130791314	130791341	145.00	-20.28
CAediting_947565	chr12_130791316_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4294	130791311	130791317	7mer-m8	130791310	130791327	142.00	-18.29
CAediting_947573	chr12_130791378_-	ENSG00000111450.12	ENST00000261653	hsa-miR-1207-3p	130791377	130791384	8mer-1a	130791377	130791394	140.00	-14.68
CAediting_947573	chr12_130791378_-	ENSG00000111450.12	ENST00000261653	hsa-miR-34a-3p	130791375	130791381	7mer-m8	130791374	130791396	143.00	-12.90
CAediting_947576	chr12_130791414_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4691-3p	130791410	130791416	7mer-m8	130791409	130791436	150.00	-26.36
CAediting_947580	chr12_130791474_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4537	130791469	130791476	8mer-1a	130791469	130791490	147.00	-26.12
CAediting_947581	chr12_130791493_-	ENSG00000111450.12	ENST00000261653	hsa-miR-500a-3p	130791488	130791493	6mer	130791487	130791508	146.00	-22.18
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6771-5p	130791277	130791284	8mer-1a	130791277	130791296	148.00	-23.97

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-1273h-5p	130791278	130791285	8mer-1a	130791278	130791297	151	-19.49
CAediting_947565	chr12_130791316_-	ENSG00000111450.12	ENST00000261653	hsa-miR-1304-5p	130791315	130791322	8mer-1a	130791315	130791336	147	-17.74
CAediting_947566	chr12_130791317_-	ENSG00000111450.12	ENST00000261653	hsa-miR-1304-5p	130791315	130791322	8mer-1a	130791315	130791336	147	-17.74
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-30b-3p	130791278	130791285	8mer-1a	130791278	130791299	155	-16.01
CAediting_947580	chr12_130791474_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3160-3p	130791469	130791476	8mer-1a	130791469	130791490	150	-19.16
CAediting_947580	chr12_130791474_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3160-3p	130791469	130791476	8mer-1a	130791469	130791490	150	-19.16
CAediting_947582	chr12_130791524_-	ENSG00000111450.12	ENST00000261653	hsa-miR-340-3p	130791518	130791525	8mer-1a	130791518	130791539	146	-18.22
CAediting_947569	chr12_130791350_-	ENSG00000111450.12	ENST00000261653	hsa-miR-340-3p	130791347	130791353	7mer-m8	130791346	130791367	149	-18.59
CAediting_947570	chr12_130791352_-	ENSG00000111450.12	ENST00000261653	hsa-miR-340-3p	130791347	130791353	7mer-m8	130791346	130791367	149	-18.59
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3689a-3p	130791278	130791285	8mer-1a	130791278	130791299	149	-22.05
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3689b-3p	130791278	130791285	8mer-1a	130791278	130791299	149	-22.1
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3689c	130791278	130791285	8mer-1a	130791278	130791299	149	-22.1
CAediting_947582	chr12_130791524_-	ENSG00000111450.12	ENST00000261653	hsa-miR-371b-5p	130791522	130791529	8mer-1a	130791522	130791543	146	-7.85
CAediting_947582	chr12_130791524_-	ENSG00000111450.12	ENST00000261653	hsa-miR-373-5p	130791522	130791529	8mer-1a	130791522	130791543	142	-8.35
CAediting_947563	chr12_130791308_-	ENSG00000111450.12	ENST00000261653	hsa-miR-3974	130791304	130791310	7mer-m8	130791303	130791328	146	-15.52
CAediting_947577	chr12_130791426_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4478	130791422	130791428	7mer-m8	130791421	130791436	149	-25.05
CAediting_947560	chr12_130791287_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4478	130791283	130791289	7mer-m8	130791282	130791298	154	-23.41
CAediting_947577	chr12_130791426_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4649-3p	130791425	130791431	7mer-m8	130791424	130791444	140	-14.11
CAediting_947569	chr12_130791350_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4684-5p	130791350	130791356	7mer-m8	130791349	130791371	155	-15.75
CAediting_947570	chr12_130791352_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4684-5p	130791350	130791356	7mer-m8	130791349	130791371	155	-15.75
CAediting_947571	chr12_130791354_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4684-5p	130791350	130791356	7mer-m8	130791349	130791371	155	-15.75
CAediting_947560	chr12_130791287_-	ENSG00000111450.12	ENST00000261653	hsa-miR-485-5p	130791282	130791288	7mer-m8	130791281	130791302	149	-16.76
CAediting_947581	chr12_130791493_-	ENSG00000111450.12	ENST00000261653	hsa-miR-508-5p	130791491	130791497	7mer-m8	130791490	130791512	146	-18.1
CAediting_947582	chr12_130791524_-	ENSG00000111450.12	ENST00000261653	hsa-miR-514b-5p	130791522	130791527	6mer	130791521	130791542	146	-12.74
CAediting_947576	chr12_130791414_-	ENSG00000111450.12	ENST00000261653	hsa-miR-5690	130791410	130791416	7mer-m8	130791409	130791429	145	-16.75
CAediting_947561	chr12_130791292_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6134	130791287	130791294	8mer-1a	130791287	130791305	154	-20.33
CAediting_947582	chr12_130791524_-	ENSG00000111450.12	ENST00000261653	hsa-miR-616-5p	130791522	130791529	8mer-1a	130791522	130791543	140	-5.71
CAediting_947581	chr12_130791493_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6512-3p	130791493	130791499	7mer-m8	130791492	130791513	140	-18.71
CAediting_947581	chr12_130791493_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6720-5p	130791493	130791499	7mer-m8	130791492	130791513	152	-28.08
CAediting_947562	chr12_130791296_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6756-5p	130791292	130791298	7mer-1a	130791292	130791314	149	-26.59
CAediting_947561	chr12_130791292_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6769a-5p	130791290	130791296	7mer-m8	130791289	130791307	142	-18.71
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6779-5p	130791278	130791285	8mer-1a	130791278	130791296	152	-22.88
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6780a-5p	130791278	130791285	8mer-1a	130791278	130791301	148	-20.23
CAediting_947582	chr12_130791524_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6827-3p	130791518	130791525	8mer-1a	130791518	130791538	140	-14.67
CAediting_947569	chr12_130791350_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6827-3p	130791347	130791353	7mer-m8	130791346	130791366	153	-17.53
CAediting_947570	chr12_130791352_-	ENSG00000111450.12	ENST00000261653	hsa-miR-6827-3p	130791347	130791353	7mer-m8	130791346	130791366	153	-17.53
CAediting_947577	chr12_130791426_-	ENSG00000111450.12	ENST00000261653	hsa-miR-7160-5p	130791424	130791430	7mer-m8	130791423	130791443	147	-20.02
CAediting_947560	chr12_130791287_-	ENSG00000111450.12	ENST00000261653	hsa-miR-7160-5p	130791285	130791291	7mer-m8	130791284	130791301	148	-19.34
CAediting_947560	chr12_130791287_-	ENSG00000111450.12	ENST00000261653	hsa-miR-7162-3p	130791286	130791292	7mer-m8	130791285	130791303	150	-18.37
CAediting_947581	chr12_130791493_-	ENSG00000111450.12	ENST00000261653	hsa-miR-766-3p	130791492	130791498	7mer-m8	130791491	130791512	145	-18.73
CAediting_947558	chr12_130791278_-	ENSG00000111450.12	ENST00000261653	hsa-miR-887-5p	130791277	130791284	8mer-1a	130791277	130791296	143	-13.53
CAediting_947559	chr12_130791279_-	ENSG00000111450.12	ENST00000261653	hsa-miR-887-5p	130791277	130791284	8mer-1a	130791277	130791296	143	-13.53

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000111450.12	ENST00000261653	hsa-miR-624-3p	130790144	130790150	7mer-m8	130790143	130790163	147	-13.77
CAediting_1229414	chr17_67471546_+	ENSG00000111450.12	ENST00000261653	hsa-miR-548aa	130790156	130790162	7mer-m8	130790155	130790179	147	-9.64
CAediting_1160181	chr17_7017644_-	ENSG00000111450.12	ENST00000261653	hsa-miR-195-3p	130790941	130790947	7mer-m8	130790940	130790961	156	-21.31
CAediting_86358	chr1_109598906_+	ENSG00000111450.12	ENST00000261653	hsa-miR-197-5p	130791292	130791299	8mer-1a	130791292	130791318	150	-25.86
CAediting_228905	chr2_188297554_+	ENSG00000111450.12	ENST00000261653	hsa-miR-561-3p	130790403	130790408	6mer	130790402	130790423	146	-12.21
CAediting_396018	chr5_1062918_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4635	130790914	130790920	7mer-m8	130790913	130790933	142	-11.75
CAediting_580943	chr7_100356700_+	ENSG00000111450.12	ENST00000261653	hsa-miR-6840-3p	130791448	130791454	7mer-m8	130791447	130791468	143	-26.65
CAediting_573001	chr7_92204086_-	ENSG00000111450.12	ENST00000261653	hsa-miR-1285-5p	130791658	130791664	7mer-m8	130791657	130791676	157	-17.56

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000111450.12	ENST00000261653	hsa-miR-195-3p	130790300	130790307	8mer-1a	130790300	130790322	151	-12.31
CAediting_1160181	chr17_7017644_-	ENSG00000111450.12	ENST00000261653	hsa-miR-195-3p	130791624	130791631	8mer-1a	130791624	130791644	145	-7.21
CAediting_396018	chr5_1062918_-	ENSG00000111450.12	ENST00000261653	hsa-miR-4635	130789982	130789988	7mer-m8	130789981	130790001	140	-10.05
CAediting_980496	chr14_31014685_-	ENSG00000111450.12	ENST00000261653	hsa-miR-624-3p	130791777	130791784	8mer-1a	130791777	130791795	146	-13.35
CAediting_980496	chr14_31014685_-	ENSG00000111450.12	ENST00000261653	hsa-miR-624-3p	130791302	130791308	7mer-m8	130791301	130791322	145	-16.44

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for STX2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for STX2

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
HNSC	CAediting_947614	chr12_130802336_-	0.00492435849105	0.327913391485321	.	.	.	.
ESCA	CAediting_947614	chr12_130802336_-	.	.	0.0217824427009888	0.282019122290482	.	.
SKCM	CAediting_947614	chr12_130802336_-	0.0253344311758694	0.293524671439435	.	.	.	.
BRCA	CAediting_947647	chr12_130802609_-	0.0206834354196825	0.303215513961765	.	.	.	.
LUAD	CAediting_947647	chr12_130802609_-	0.00590171340327436	0.351414656398548	.	.	.	.
LUSC	CAediting_947647	chr12_130802609_-	0.00059623444124712	0.392368770508227	.	.	.	.
KIRC	CAediting_947654	chr12_130802667_-	.	.	.	.	0.0330558936254538	0.282786120997028
HNSC	CAediting_947666	chr12_130802709_-	0.0185831737777378	0.303063644304825	.	.	.	.
STAD	CAediting_947666	chr12_130802709_-	0.0054257186586942	0.318036756859871	.	.	.	.
KIRP	CAediting_947666	chr12_130802709_-	1.01688536516621e-05	0.482471810365062	.	.	0.0263981712960936	0.254691444147853
ESCA	CAediting_947666	chr12_130802709_-	.	.	0.0323895093996156	0.272113231405052	.	.
SKCM	CAediting_947666	chr12_130802709_-	0.00765840721428051	0.335625438091932	.	.	.	.
KIRP	CAediting_947667	chr12_130802714_-	0.0223699502704641	0.299506435256985	.	.	.	.
KIRP	CAediting_947668	chr12_130802715_-	0.0177653870260047	0.27868128585778	.	.	0.00321829632968865	0.34262070048765
SKCM	CAediting_947668	chr12_130802715_-	0.00456445854560896	0.370414983983003	.	.	.	.
STAD	CAediting_947669	chr12_130802723_-	.	.	5.04721401551759e-06	0.52176227383326	.	.
KIRC	CAediting_947669	chr12_130802723_-	.	.	0.00128566162087652	0.314492085018802	.	.
KIRP	CAediting_947669	chr12_130802723_-	.	.	1.24569765998738e-08	0.66498417740738	.	.
ESCA	CAediting_947669	chr12_130802723_-	.	.	0.00123675637352174	0.42091144160757	.	.
ESCA	CAediting_947671	chr12_130802739_-	.	.	0.0055955314256833	0.382565322614149	.	.
HNSC	CAediting_947673	chr12_130802746_-	2.15871879106536e-05	0.490661749460393	.	.	.	.
STAD	CAediting_947673	chr12_130802746_-	.	.	0.0417470671750593	0.244053660586883	.	.
ESCA	CAediting_947673	chr12_130802746_-	.	.	0.0485499601184858	0.240142862297963	.	.
HNSC	CAediting_947675	chr12_130802751_-	0.000893643726859954	0.357909378494811	.	.	.	.
KIRP	CAediting_947675	chr12_130802751_-	.	.	0.0376778211826811	0.273624258615341	.	.
SKCM	CAediting_947675	chr12_130802751_-	0.0171491672641867	0.267520709043456	.	.	.	.
STAD	CAediting_947683	chr12_130803280_-	0.0215206529530759	0.312256422671288	.	.	.	.
STAD	CAediting_947684	chr12_130803283_-	9.25317727038237e-05	0.519830552295298	.	.	.	.
HNSC	CAediting_947709	chr12_130803555_-	0.0308841385221349	0.305650681411682	.	.	.	.
ESCA	CAediting_947709	chr12_130803555_-	.	.	0.0474144728167951	0.273630981046132	.	.
SKCM	CAediting_947709	chr12_130803555_-	.	.	0.0360496930871471	0.29145421697877	.	.
KIRC	CAediting_947710	chr12_130803567_-	.	.	.	.	0.0269067945244164	0.283356118911109

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Relation with cancer stages for STX2

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_947675	chr12_130802751_-	0.0492553134482024	-0.246843892098591
HNSC	clinical_stage	CAediting_947647	chr12_130802609_-	0.000791402370351481	0.428501093592014
HNSC	pathologic_stage	CAediting_947647	chr12_130802609_-	0.000347317041723572	0.477226397034255
KIRP	clinical_stage	CAediting_947614	chr12_130802336_-	0.00361427643023902	0.449526519550209
KIRP	clinical_stage	CAediting_947647	chr12_130802609_-	0.0254519335078027	0.394521868341262
KIRP	clinical_stage	CAediting_947668	chr12_130802715_-	0.00157275639136586	0.48926765739448
KIRP	clinical_stage	CAediting_947675	chr12_130802751_-	0.00404947685819751	0.494105959314525
KIRP	pathologic_stage	CAediting_947647	chr12_130802609_-	0.0404042206161314	0.290912089042132
KIRP	pathologic_stage	CAediting_947666	chr12_130802709_-	0.0419168486645093	0.242124790430523
KIRP	pathologic_stage	CAediting_947667	chr12_130802714_-	0.0213861280000681	0.30972123255145
KIRP	pathologic_stage	CAediting_947668	chr12_130802715_-	0.00037868657698741	0.421743229922754
KIRP	pathologic_stage	CAediting_947675	chr12_130802751_-	0.0168698040593214	0.323932758643608
LUSC	pathologic_stage	CAediting_947633	chr12_130802471_-	0.0161550866274332	0.332112786392485
STAD	pathologic_stage	CAediting_947620	chr12_130802380_-	0.0216578551753252	0.324124535373466
STAD	pathologic_stage	CAediting_947683	chr12_130803280_-	0.019395322297045	0.323299954699429

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Relation with survival for STX2

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LUSC	CAediting_947666	chr12_130802709_-	0.00130462700902423	0.0185715	0.01504
KIRP	CAediting_947667	chr12_130802714_-	0.00184193540161981	0.0265577	1524930

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RelatedDrugs for STX2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for STX2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
STX2	C0021364	Male infertility	1	CTD_human
STX2	C0848676	Subfertility, Male	1	CTD_human
STX2	C0917731	Male sterility	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene