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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: CTTN (CAeditome ID:2017) |
Gene summary for CTTN |
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Gene information | Gene symbol | CTTN | Gene ID | 2017 |
Gene name | cortactin | |
Synonyms | EMS1 | |
Cytomap | 11q13.3 | |
Type of gene | protein-coding | |
Description | src substrate cortactin1110020L01Rikamplaxinems1 sequence (mammary tumor and squamous cell carcinoma-associated (p80/85 src substrate)epididymis secretory sperm binding proteinoncogene EMS1 | |
Modification date | 20210518 | |
UniProtAcc | Q14247 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
CTTN | GO:0005884 | Src substrate cortactin | 12151401 |
CTTN | GO:0005737 | Src substrate cortactin | 10760273 |
CTTN | GO:0005737 | Src substrate cortactin | 24700464 |
CTTN | GO:0005794 | Src substrate cortactin | 0000052 |
CTTN | GO:0005829 | Src substrate cortactin | 0000052 |
CTTN | GO:0005886 | Src substrate cortactin | 0000052 |
CTTN | GO:0005938 | Src substrate cortactin | 14742709 |
CTTN | GO:0005938 | Src substrate cortactin | 24700464 |
CTTN | GO:0030027 | Src substrate cortactin | 10760273 |
CTTN | GO:0030027 | Src substrate cortactin | 12151401 |
CTTN | GO:0030863 | Src substrate cortactin | 12151401 |
CTTN | GO:0043231 | Src substrate cortactin | 0000052 |
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RNA A-to-I events for CTTN |
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CAediting_835837(70400214, +), CAediting_835838(70400235, +), CAediting_835839(70400236, +), CAediting_835840(70400241, +), CAediting_835841(70400243, +), CAediting_835842(70400259, +), CAediting_835843(70400287, +), CAediting_835844(70400372, +), CAediting_835845(70400382, +), CAediting_835846(70400383, +), CAediting_835847(70400388, +), CAediting_835848(70400391, +), CAediting_835849(70400503, +), CAediting_835850(70400530, +), CAediting_835851(70400543, +), CAediting_835852(70400548, +), CAediting_835853(70400560, +), CAediting_835854(70401078, +), CAediting_835855(70401079, +), CAediting_835856(70401100, +), CAediting_835857(70401101, +), CAediting_835858(70401106, +), CAediting_835859(70401165, +), CAediting_835860(70401209, +), CAediting_835861(70401215, +), CAediting_835862(70401216, +), CAediting_835863(70401238, +), CAediting_835864(70401246, +), CAediting_835865(70401251, +), CAediting_835866(70401254, +), CAediting_835867(70401259, +), CAediting_835868(70401287, +), CAediting_835869(70401319, +), CAediting_835870(70401329, +), CAediting_835871(70401355, +), CAediting_835872(70401361, +), CAediting_835873(70401369, +), CAediting_835874(70401372, +), CAediting_835875(70401378, +), CAediting_835876(70401396, +), CAediting_835877(70401397, +), CAediting_835878(70401405, +), CAediting_835879(70401417, +), CAediting_835880(70401421, +), CAediting_835881(70401428, +), CAediting_835882(70401431, +), CAediting_835883(70401433, +), CAediting_835884(70401455, +), CAediting_835885(70401492, +), CAediting_835886(70401501, +), CAediting_835887(70401517, +), CAediting_835888(70401527, +), CAediting_835889(70401541, +), CAediting_835890(70401544, +), CAediting_835891(70401554, +), CAediting_835892(70401569, +), CAediting_835893(70401713, +), CAediting_835894(70401723, +), CAediting_835895(70401730, +), CAediting_835896(70401743, +), CAediting_835897(70401755, +), CAediting_835898(70401775, +), CAediting_835899(70401816, +), CAediting_835900(70401821, +), CAediting_835901(70401845, +), CAediting_835902(70401895, +), CAediting_835903(70401896, +), CAediting_835904(70401910, +), CAediting_835905(70401926, +), CAediting_835906(70401931, +), CAediting_835907(70401968, +), CAediting_835908(70401970, +), CAediting_835909(70401971, +), CAediting_835910(70401974, +), CAediting_835911(70401975, +), CAediting_835912(70401976, +), CAediting_835913(70401987, +), CAediting_835914(70401999, +), CAediting_835915(70402006, +), CAediting_835916(70402032, +), CAediting_835917(70402033, +), CAediting_835918(70402059, +), CAediting_835919(70402068, +), CAediting_835920(70402074, +), CAediting_835921(70402085, +), CAediting_835922(70402123, +), CAediting_835923(70402124, +), CAediting_835924(70402128, +), CAediting_835925(70402132, +), CAediting_835926(70403232, +), CAediting_835927(70403288, +), CAediting_835928(70403289, +), CAediting_835929(70403292, +), CAediting_835930(70403306, +), CAediting_835931(70403315, +), CAediting_835932(70403318, +), CAediting_835933(70403328, +), CAediting_835934(70403354, +), CAediting_835935(70403355, +), CAediting_835936(70403372, +), CAediting_835937(70403389, +), CAediting_835938(70403449, +), CAediting_835939(70403461, +), CAediting_835940(70403904, +), CAediting_835941(70403948, +), CAediting_835942(70403955, +), CAediting_835943(70403981, +), CAediting_835944(70403993, +), CAediting_835945(70403998, +), CAediting_835946(70404010, +), CAediting_835947(70404028, +), CAediting_835948(70404030, +), CAediting_835949(70404741, +), CAediting_835950(70404747, +), CAediting_835951(70404748, +), CAediting_835952(70404774, +), CAediting_835953(70404813, +), CAediting_835954(70404847, +), CAediting_835955(70404855, +), CAediting_835956(70404881, +), CAediting_835957(70404882, +), CAediting_835958(70404946, +), CAediting_835959(70404947, +), CAediting_835960(70408417, +), CAediting_835961(70408515, +), CAediting_835962(70408660, +), CAediting_835963(70408662, +), CAediting_835964(70412187, +), CAediting_835965(70414332, +), CAediting_835966(70416613, +), CAediting_835967(70416653, +), CAediting_835968(70426136, +), CAediting_835969(70426152, +), CAediting_835970(70426153, +), CAediting_835971(70426220, +), CAediting_835972(70426300, +), CAediting_835973(70426313, +), CAediting_835974(70426317, +), CAediting_835975(70426322, +), CAediting_835976(70426332, +), CAediting_835977(70426463, +), CAediting_835978(70426465, +), CAediting_835979(70426519, +), CAediting_835980(70426537, +), CAediting_835981(70426549, +), CAediting_835982(70426556, +), CAediting_835983(70426562, +), CAediting_835984(70426580, +), CAediting_835985(70426606, +), CAediting_835986(70426614, +), CAediting_835987(70426638, +), CAediting_835988(70426718, +), CAediting_835989(70426728, +), CAediting_835990(70426730, +), CAediting_835991(70426861, +), CAediting_835992(70426862, +), CAediting_835993(70426874, +), CAediting_835994(70426876, +), CAediting_835995(70426919, +), CAediting_835996(70426926, +), CAediting_835997(70426945, +), CAediting_835998(70426965, +), CAediting_835999(70426970, +), CAediting_836000(70426971, +), CAediting_836001(70426975, +), CAediting_836002(70426997, +), CAediting_836003(70426998, +), CAediting_836004(70427088, +), CAediting_836005(70427094, +), CAediting_836006(70427095, +), CAediting_836007(70427103, +), CAediting_836008(70427135, +), CAediting_836009(70427163, +), CAediting_836010(70427164, +), CAediting_836011(70427172, +), CAediting_836012(70427173, +), CAediting_836013(70427174, +), CAediting_836014(70427185, +), CAediting_836015(70427188, +), CAediting_836016(70427189, +), CAediting_836017(70427190, +), CAediting_836018(70427200, +), CAediting_836019(70427229, +), CAediting_836020(70427230, +), CAediting_836021(70427239, +), CAediting_836022(70427246, +), CAediting_836023(70427252, +), CAediting_836024(70427271, +), CAediting_836025(70427281, +), CAediting_836026(70427283, +), CAediting_836027(70427290, +), CAediting_836028(70427301, +), CAediting_836029(70427309, +), CAediting_836030(70427338, +), CAediting_836031(70427339, +), CAediting_836032(70427345, +), CAediting_836033(70427363, +), CAediting_836034(70427379, +), CAediting_836035(70427383, +), CAediting_836036(70427385, +), CAediting_836037(70427414, +), CAediting_836038(70428190, +), CAediting_836039(70428227, +), CAediting_836040(70428229, +), CAediting_836041(70428245, +), CAediting_836042(70428266, +), CAediting_836043(70428283, +), CAediting_836044(70428295, +), CAediting_836045(70428322, +), CAediting_836046(70428353, +), CAediting_836047(70428366, +), CAediting_836048(70428375, +), CAediting_836049(70428416, +), CAediting_836050(70428425, +), CAediting_836051(70428426, +), CAediting_836052(70428438, +), CAediting_836053(70428454, +), CAediting_836054(70428545, +), CAediting_836055(70428547, +), CAediting_836056(70428573, +), CAediting_836057(70428583, +), CAediting_836058(70428595, +), CAediting_836059(70428683, +), |
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RNA editing positional annotations for CTTN using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_835837 | chr11_70400214_+ | ncRNA_intronic |
CAediting_835838 | chr11_70400235_+ | ncRNA_intronic |
CAediting_835839 | chr11_70400236_+ | ncRNA_intronic |
CAediting_835840 | chr11_70400241_+ | ncRNA_intronic |
CAediting_835841 | chr11_70400243_+ | ncRNA_intronic |
CAediting_835842 | chr11_70400259_+ | ncRNA_intronic |
CAediting_835843 | chr11_70400287_+ | ncRNA_intronic |
CAediting_835844 | chr11_70400372_+ | ncRNA_intronic |
CAediting_835845 | chr11_70400382_+ | ncRNA_intronic |
CAediting_835846 | chr11_70400383_+ | ncRNA_intronic |
CAediting_835847 | chr11_70400388_+ | ncRNA_intronic |
CAediting_835848 | chr11_70400391_+ | ncRNA_intronic |
CAediting_835849 | chr11_70400503_+ | ncRNA_intronic |
CAediting_835850 | chr11_70400530_+ | ncRNA_intronic |
CAediting_835851 | chr11_70400543_+ | ncRNA_intronic |
CAediting_835852 | chr11_70400548_+ | ncRNA_intronic |
CAediting_835853 | chr11_70400560_+ | ncRNA_intronic |
CAediting_835854 | chr11_70401078_+ | ncRNA_intronic |
CAediting_835855 | chr11_70401079_+ | ncRNA_intronic |
CAediting_835856 | chr11_70401100_+ | ncRNA_intronic |
CAediting_835857 | chr11_70401101_+ | ncRNA_intronic |
CAediting_835858 | chr11_70401106_+ | ncRNA_intronic |
CAediting_835859 | chr11_70401165_+ | ncRNA_intronic |
CAediting_835860 | chr11_70401209_+ | ncRNA_intronic |
CAediting_835861 | chr11_70401215_+ | ncRNA_intronic |
CAediting_835862 | chr11_70401216_+ | ncRNA_intronic |
CAediting_835863 | chr11_70401238_+ | ncRNA_intronic |
CAediting_835864 | chr11_70401246_+ | ncRNA_intronic |
CAediting_835865 | chr11_70401251_+ | ncRNA_intronic |
CAediting_835866 | chr11_70401254_+ | ncRNA_intronic |
CAediting_835867 | chr11_70401259_+ | ncRNA_intronic |
CAediting_835868 | chr11_70401287_+ | ncRNA_intronic |
CAediting_835869 | chr11_70401319_+ | ncRNA_intronic |
CAediting_835870 | chr11_70401329_+ | ncRNA_intronic |
CAediting_835871 | chr11_70401355_+ | ncRNA_intronic |
CAediting_835872 | chr11_70401361_+ | ncRNA_intronic |
CAediting_835873 | chr11_70401369_+ | ncRNA_intronic |
CAediting_835874 | chr11_70401372_+ | ncRNA_intronic |
CAediting_835875 | chr11_70401378_+ | ncRNA_intronic |
CAediting_835876 | chr11_70401396_+ | ncRNA_intronic |
CAediting_835877 | chr11_70401397_+ | ncRNA_intronic |
CAediting_835878 | chr11_70401405_+ | ncRNA_intronic |
CAediting_835879 | chr11_70401417_+ | ncRNA_intronic |
CAediting_835880 | chr11_70401421_+ | ncRNA_intronic |
CAediting_835881 | chr11_70401428_+ | ncRNA_intronic |
CAediting_835882 | chr11_70401431_+ | ncRNA_intronic |
CAediting_835883 | chr11_70401433_+ | ncRNA_intronic |
CAediting_835884 | chr11_70401455_+ | ncRNA_intronic |
CAediting_835885 | chr11_70401492_+ | ncRNA_intronic |
CAediting_835886 | chr11_70401501_+ | ncRNA_intronic |
CAediting_835887 | chr11_70401517_+ | ncRNA_intronic |
CAediting_835888 | chr11_70401527_+ | ncRNA_intronic |
CAediting_835889 | chr11_70401541_+ | ncRNA_intronic |
CAediting_835890 | chr11_70401544_+ | ncRNA_intronic |
CAediting_835891 | chr11_70401554_+ | ncRNA_intronic |
CAediting_835892 | chr11_70401569_+ | ncRNA_intronic |
CAediting_835893 | chr11_70401713_+ | ncRNA_intronic |
CAediting_835894 | chr11_70401723_+ | ncRNA_intronic |
CAediting_835895 | chr11_70401730_+ | ncRNA_intronic |
CAediting_835896 | chr11_70401743_+ | ncRNA_intronic |
CAediting_835897 | chr11_70401755_+ | ncRNA_intronic |
CAediting_835898 | chr11_70401775_+ | ncRNA_intronic |
CAediting_835899 | chr11_70401816_+ | ncRNA_intronic |
CAediting_835900 | chr11_70401821_+ | ncRNA_intronic |
CAediting_835901 | chr11_70401845_+ | ncRNA_intronic |
CAediting_835902 | chr11_70401895_+ | ncRNA_intronic |
CAediting_835903 | chr11_70401896_+ | ncRNA_intronic |
CAediting_835904 | chr11_70401910_+ | ncRNA_intronic |
CAediting_835905 | chr11_70401926_+ | ncRNA_intronic |
CAediting_835906 | chr11_70401931_+ | ncRNA_intronic |
CAediting_835907 | chr11_70401968_+ | ncRNA_intronic |
CAediting_835908 | chr11_70401970_+ | ncRNA_intronic |
CAediting_835909 | chr11_70401971_+ | ncRNA_intronic |
CAediting_835910 | chr11_70401974_+ | ncRNA_intronic |
CAediting_835911 | chr11_70401975_+ | ncRNA_intronic |
CAediting_835912 | chr11_70401976_+ | ncRNA_intronic |
CAediting_835913 | chr11_70401987_+ | ncRNA_intronic |
CAediting_835914 | chr11_70401999_+ | ncRNA_intronic |
CAediting_835915 | chr11_70402006_+ | ncRNA_intronic |
CAediting_835916 | chr11_70402032_+ | ncRNA_intronic |
CAediting_835917 | chr11_70402033_+ | ncRNA_intronic |
CAediting_835918 | chr11_70402059_+ | ncRNA_intronic |
CAediting_835919 | chr11_70402068_+ | ncRNA_intronic |
CAediting_835920 | chr11_70402074_+ | ncRNA_intronic |
CAediting_835921 | chr11_70402085_+ | ncRNA_intronic |
CAediting_835922 | chr11_70402123_+ | ncRNA_intronic |
CAediting_835923 | chr11_70402124_+ | ncRNA_intronic |
CAediting_835924 | chr11_70402128_+ | ncRNA_intronic |
CAediting_835925 | chr11_70402132_+ | ncRNA_intronic |
CAediting_835926 | chr11_70403232_+ | ncRNA_intronic |
CAediting_835927 | chr11_70403288_+ | ncRNA_intronic |
CAediting_835928 | chr11_70403289_+ | ncRNA_intronic |
CAediting_835929 | chr11_70403292_+ | ncRNA_intronic |
CAediting_835930 | chr11_70403306_+ | ncRNA_intronic |
CAediting_835931 | chr11_70403315_+ | ncRNA_intronic |
CAediting_835932 | chr11_70403318_+ | ncRNA_intronic |
CAediting_835933 | chr11_70403328_+ | ncRNA_intronic |
CAediting_835934 | chr11_70403354_+ | ncRNA_intronic |
CAediting_835935 | chr11_70403355_+ | ncRNA_intronic |
CAediting_835936 | chr11_70403372_+ | ncRNA_intronic |
CAediting_835937 | chr11_70403389_+ | ncRNA_intronic |
CAediting_835938 | chr11_70403449_+ | ncRNA_intronic |
CAediting_835939 | chr11_70403461_+ | ncRNA_intronic |
CAediting_835940 | chr11_70403904_+ | ncRNA_intronic |
CAediting_835941 | chr11_70403948_+ | ncRNA_intronic |
CAediting_835942 | chr11_70403955_+ | ncRNA_intronic |
CAediting_835943 | chr11_70403981_+ | ncRNA_intronic |
CAediting_835944 | chr11_70403993_+ | ncRNA_intronic |
CAediting_835945 | chr11_70403998_+ | ncRNA_intronic |
CAediting_835946 | chr11_70404010_+ | ncRNA_intronic |
CAediting_835947 | chr11_70404028_+ | ncRNA_intronic |
CAediting_835948 | chr11_70404030_+ | ncRNA_intronic |
CAediting_835949 | chr11_70404741_+ | ncRNA_intronic |
CAediting_835950 | chr11_70404747_+ | ncRNA_intronic |
CAediting_835951 | chr11_70404748_+ | ncRNA_intronic |
CAediting_835952 | chr11_70404774_+ | ncRNA_intronic |
CAediting_835953 | chr11_70404813_+ | ncRNA_intronic |
CAediting_835954 | chr11_70404847_+ | ncRNA_intronic |
CAediting_835955 | chr11_70404855_+ | ncRNA_intronic |
CAediting_835956 | chr11_70404881_+ | ncRNA_intronic |
CAediting_835957 | chr11_70404882_+ | ncRNA_intronic |
CAediting_835958 | chr11_70404946_+ | ncRNA_intronic |
CAediting_835959 | chr11_70404947_+ | ncRNA_intronic |
CAediting_835960 | chr11_70408417_+ | ncRNA_intronic |
CAediting_835961 | chr11_70408515_+ | ncRNA_intronic |
CAediting_835962 | chr11_70408660_+ | ncRNA_intronic |
CAediting_835963 | chr11_70408662_+ | ncRNA_intronic |
CAediting_835964 | chr11_70412187_+ | ncRNA_intronic |
CAediting_835965 | chr11_70414332_+ | ncRNA_intronic |
CAediting_835966 | chr11_70416613_+ | ncRNA_intronic |
CAediting_835967 | chr11_70416653_+ | ncRNA_intronic |
CAediting_835968 | chr11_70426136_+ | ncRNA_intronic |
CAediting_835969 | chr11_70426152_+ | ncRNA_intronic |
CAediting_835970 | chr11_70426153_+ | ncRNA_intronic |
CAediting_835971 | chr11_70426220_+ | ncRNA_intronic |
CAediting_835972 | chr11_70426300_+ | ncRNA_intronic |
CAediting_835973 | chr11_70426313_+ | ncRNA_intronic |
CAediting_835974 | chr11_70426317_+ | ncRNA_intronic |
CAediting_835975 | chr11_70426322_+ | ncRNA_intronic |
CAediting_835976 | chr11_70426332_+ | ncRNA_intronic |
CAediting_835977 | chr11_70426463_+ | ncRNA_intronic |
CAediting_835978 | chr11_70426465_+ | ncRNA_intronic |
CAediting_835979 | chr11_70426519_+ | ncRNA_intronic |
CAediting_835980 | chr11_70426537_+ | ncRNA_intronic |
CAediting_835981 | chr11_70426549_+ | ncRNA_intronic |
CAediting_835982 | chr11_70426556_+ | ncRNA_intronic |
CAediting_835983 | chr11_70426562_+ | ncRNA_intronic |
CAediting_835984 | chr11_70426580_+ | ncRNA_intronic |
CAediting_835985 | chr11_70426606_+ | ncRNA_intronic |
CAediting_835986 | chr11_70426614_+ | ncRNA_intronic |
CAediting_835987 | chr11_70426638_+ | ncRNA_intronic |
CAediting_835988 | chr11_70426718_+ | ncRNA_intronic |
CAediting_835989 | chr11_70426728_+ | ncRNA_intronic |
CAediting_835990 | chr11_70426730_+ | ncRNA_intronic |
CAediting_835991 | chr11_70426861_+ | ncRNA_intronic |
CAediting_835992 | chr11_70426862_+ | ncRNA_intronic |
CAediting_835993 | chr11_70426874_+ | ncRNA_intronic |
CAediting_835994 | chr11_70426876_+ | ncRNA_intronic |
CAediting_835995 | chr11_70426919_+ | ncRNA_intronic |
CAediting_835996 | chr11_70426926_+ | ncRNA_intronic |
CAediting_835997 | chr11_70426945_+ | ncRNA_intronic |
CAediting_835998 | chr11_70426965_+ | ncRNA_intronic |
CAediting_835999 | chr11_70426970_+ | ncRNA_intronic |
CAediting_836000 | chr11_70426971_+ | ncRNA_intronic |
CAediting_836001 | chr11_70426975_+ | ncRNA_intronic |
CAediting_836002 | chr11_70426997_+ | ncRNA_intronic |
CAediting_836003 | chr11_70426998_+ | ncRNA_intronic |
CAediting_836004 | chr11_70427088_+ | ncRNA_intronic |
CAediting_836005 | chr11_70427094_+ | ncRNA_intronic |
CAediting_836006 | chr11_70427095_+ | ncRNA_intronic |
CAediting_836007 | chr11_70427103_+ | ncRNA_intronic |
CAediting_836008 | chr11_70427135_+ | ncRNA_intronic |
CAediting_836009 | chr11_70427163_+ | ncRNA_intronic |
CAediting_836010 | chr11_70427164_+ | ncRNA_intronic |
CAediting_836011 | chr11_70427172_+ | ncRNA_intronic |
CAediting_836012 | chr11_70427173_+ | ncRNA_intronic |
CAediting_836013 | chr11_70427174_+ | ncRNA_intronic |
CAediting_836014 | chr11_70427185_+ | ncRNA_intronic |
CAediting_836015 | chr11_70427188_+ | ncRNA_intronic |
CAediting_836016 | chr11_70427189_+ | ncRNA_intronic |
CAediting_836017 | chr11_70427190_+ | ncRNA_intronic |
CAediting_836018 | chr11_70427200_+ | ncRNA_intronic |
CAediting_836019 | chr11_70427229_+ | ncRNA_intronic |
CAediting_836020 | chr11_70427230_+ | ncRNA_intronic |
CAediting_836021 | chr11_70427239_+ | ncRNA_intronic |
CAediting_836022 | chr11_70427246_+ | ncRNA_intronic |
CAediting_836023 | chr11_70427252_+ | ncRNA_intronic |
CAediting_836024 | chr11_70427271_+ | ncRNA_intronic |
CAediting_836025 | chr11_70427281_+ | ncRNA_intronic |
CAediting_836026 | chr11_70427283_+ | ncRNA_intronic |
CAediting_836027 | chr11_70427290_+ | ncRNA_intronic |
CAediting_836028 | chr11_70427301_+ | ncRNA_intronic |
CAediting_836029 | chr11_70427309_+ | ncRNA_intronic |
CAediting_836030 | chr11_70427338_+ | ncRNA_intronic |
CAediting_836031 | chr11_70427339_+ | ncRNA_intronic |
CAediting_836032 | chr11_70427345_+ | ncRNA_intronic |
CAediting_836033 | chr11_70427363_+ | ncRNA_intronic |
CAediting_836034 | chr11_70427379_+ | ncRNA_intronic |
CAediting_836035 | chr11_70427383_+ | ncRNA_intronic |
CAediting_836036 | chr11_70427385_+ | ncRNA_intronic |
CAediting_836037 | chr11_70427414_+ | ncRNA_intronic |
CAediting_836038 | chr11_70428190_+ | ncRNA_intronic |
CAediting_836039 | chr11_70428227_+ | ncRNA_intronic |
CAediting_836040 | chr11_70428229_+ | ncRNA_intronic |
CAediting_836041 | chr11_70428245_+ | ncRNA_intronic |
CAediting_836042 | chr11_70428266_+ | ncRNA_intronic |
CAediting_836043 | chr11_70428283_+ | ncRNA_intronic |
CAediting_836044 | chr11_70428295_+ | ncRNA_intronic |
CAediting_836045 | chr11_70428322_+ | ncRNA_intronic |
CAediting_836046 | chr11_70428353_+ | ncRNA_intronic |
CAediting_836047 | chr11_70428366_+ | ncRNA_intronic |
CAediting_836048 | chr11_70428375_+ | ncRNA_intronic |
CAediting_836049 | chr11_70428416_+ | ncRNA_intronic |
CAediting_836050 | chr11_70428425_+ | ncRNA_intronic |
CAediting_836051 | chr11_70428426_+ | ncRNA_intronic |
CAediting_836052 | chr11_70428438_+ | ncRNA_intronic |
CAediting_836053 | chr11_70428454_+ | ncRNA_intronic |
CAediting_836054 | chr11_70428545_+ | ncRNA_intronic |
CAediting_836055 | chr11_70428547_+ | ncRNA_intronic |
CAediting_836056 | chr11_70428573_+ | ncRNA_intronic |
CAediting_836057 | chr11_70428583_+ | ncRNA_intronic |
CAediting_836058 | chr11_70428595_+ | ncRNA_intronic |
CAediting_836059 | chr11_70428683_+ | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_835837 | chr11_70400214_+ | SINE | Alu | AluJr |
CAediting_835838 | chr11_70400235_+ | SINE | Alu | AluJr |
CAediting_835839 | chr11_70400236_+ | SINE | Alu | AluJr |
CAediting_835840 | chr11_70400241_+ | SINE | Alu | AluJr |
CAediting_835841 | chr11_70400243_+ | SINE | Alu | AluJr |
CAediting_835842 | chr11_70400259_+ | SINE | Alu | AluJr |
CAediting_835843 | chr11_70400287_+ | SINE | Alu | AluJr |
CAediting_835844 | chr11_70400372_+ | SINE | Alu | AluJr |
CAediting_835845 | chr11_70400382_+ | SINE | Alu | AluJr |
CAediting_835846 | chr11_70400383_+ | SINE | Alu | AluJr |
CAediting_835847 | chr11_70400388_+ | SINE | Alu | AluJr |
CAediting_835848 | chr11_70400391_+ | SINE | Alu | AluJr |
CAediting_835849 | chr11_70400503_+ | SINE | Alu | FAM |
CAediting_835850 | chr11_70400530_+ | SINE | Alu | FAM |
CAediting_835851 | chr11_70400543_+ | SINE | Alu | FAM |
CAediting_835852 | chr11_70400548_+ | SINE | Alu | FAM |
CAediting_835853 | chr11_70400560_+ | SINE | Alu | FAM |
CAediting_835854 | chr11_70401078_+ | SINE | Alu | AluSx1 |
CAediting_835855 | chr11_70401079_+ | SINE | Alu | AluSx1 |
CAediting_835856 | chr11_70401100_+ | SINE | Alu | AluSx1 |
CAediting_835857 | chr11_70401101_+ | SINE | Alu | AluSx1 |
CAediting_835858 | chr11_70401106_+ | SINE | Alu | AluSx1 |
CAediting_835859 | chr11_70401165_+ | SINE | Alu | AluSx1 |
CAediting_835860 | chr11_70401209_+ | SINE | Alu | AluSc8 |
CAediting_835861 | chr11_70401215_+ | SINE | Alu | AluSc8 |
CAediting_835862 | chr11_70401216_+ | SINE | Alu | AluSc8 |
CAediting_835863 | chr11_70401238_+ | SINE | Alu | AluSc8 |
CAediting_835864 | chr11_70401246_+ | SINE | Alu | AluSc8 |
CAediting_835865 | chr11_70401251_+ | SINE | Alu | AluSc8 |
CAediting_835866 | chr11_70401254_+ | SINE | Alu | AluSc8 |
CAediting_835867 | chr11_70401259_+ | SINE | Alu | AluSc8 |
CAediting_835868 | chr11_70401287_+ | SINE | Alu | AluSc8 |
CAediting_835869 | chr11_70401319_+ | SINE | Alu | AluSc8 |
CAediting_835870 | chr11_70401329_+ | SINE | Alu | AluSc8 |
CAediting_835871 | chr11_70401355_+ | SINE | Alu | AluSc8 |
CAediting_835872 | chr11_70401361_+ | SINE | Alu | AluSc8 |
CAediting_835873 | chr11_70401369_+ | SINE | Alu | AluSc8 |
CAediting_835874 | chr11_70401372_+ | SINE | Alu | AluSc8 |
CAediting_835875 | chr11_70401378_+ | SINE | Alu | AluSc8 |
CAediting_835876 | chr11_70401396_+ | SINE | Alu | AluSc8 |
CAediting_835877 | chr11_70401397_+ | SINE | Alu | AluSc8 |
CAediting_835878 | chr11_70401405_+ | SINE | Alu | AluSc8 |
CAediting_835879 | chr11_70401417_+ | SINE | Alu | AluSc8 |
CAediting_835880 | chr11_70401421_+ | SINE | Alu | AluSc8 |
CAediting_835881 | chr11_70401428_+ | SINE | Alu | AluSc8 |
CAediting_835882 | chr11_70401431_+ | SINE | Alu | AluSc8 |
CAediting_835883 | chr11_70401433_+ | SINE | Alu | AluSc8 |
CAediting_835884 | chr11_70401455_+ | SINE | Alu | AluSc8 |
CAediting_835885 | chr11_70401492_+ | SINE | Alu | AluSc8 |
CAediting_835886 | chr11_70401501_+ | SINE | Alu | AluSx1 |
CAediting_835887 | chr11_70401517_+ | SINE | Alu | AluSx1 |
CAediting_835888 | chr11_70401527_+ | SINE | Alu | AluSx1 |
CAediting_835889 | chr11_70401541_+ | SINE | Alu | AluSx1 |
CAediting_835890 | chr11_70401544_+ | SINE | Alu | AluSx1 |
CAediting_835891 | chr11_70401554_+ | SINE | Alu | AluSx1 |
CAediting_835892 | chr11_70401569_+ | SINE | Alu | AluSx1 |
CAediting_835893 | chr11_70401713_+ | SINE | Alu | AluSx3 |
CAediting_835894 | chr11_70401723_+ | SINE | Alu | AluSx3 |
CAediting_835895 | chr11_70401730_+ | SINE | Alu | AluSx3 |
CAediting_835896 | chr11_70401743_+ | SINE | Alu | AluSx3 |
CAediting_835897 | chr11_70401755_+ | SINE | Alu | AluSx3 |
CAediting_835898 | chr11_70401775_+ | SINE | Alu | AluSx3 |
CAediting_835899 | chr11_70401816_+ | SINE | Alu | AluSx3 |
CAediting_835900 | chr11_70401821_+ | SINE | Alu | AluSx3 |
CAediting_835901 | chr11_70401845_+ | SINE | Alu | AluSx3 |
CAediting_835902 | chr11_70401895_+ | SINE | Alu | AluSz |
CAediting_835903 | chr11_70401896_+ | SINE | Alu | AluSz |
CAediting_835904 | chr11_70401910_+ | SINE | Alu | AluSz |
CAediting_835905 | chr11_70401926_+ | SINE | Alu | AluSz |
CAediting_835906 | chr11_70401931_+ | SINE | Alu | AluSz |
CAediting_835907 | chr11_70401968_+ | SINE | Alu | AluSz |
CAediting_835908 | chr11_70401970_+ | SINE | Alu | AluSz |
CAediting_835909 | chr11_70401971_+ | SINE | Alu | AluSz |
CAediting_835910 | chr11_70401974_+ | SINE | Alu | AluSz |
CAediting_835911 | chr11_70401975_+ | SINE | Alu | AluSz |
CAediting_835912 | chr11_70401976_+ | SINE | Alu | AluSz |
CAediting_835913 | chr11_70401987_+ | SINE | Alu | AluSz |
CAediting_835914 | chr11_70401999_+ | SINE | Alu | AluSz |
CAediting_835915 | chr11_70402006_+ | SINE | Alu | AluSz |
CAediting_835916 | chr11_70402032_+ | SINE | Alu | AluSz |
CAediting_835917 | chr11_70402033_+ | SINE | Alu | AluSz |
CAediting_835918 | chr11_70402059_+ | SINE | Alu | AluSz |
CAediting_835919 | chr11_70402068_+ | SINE | Alu | AluSz |
CAediting_835920 | chr11_70402074_+ | SINE | Alu | AluSz |
CAediting_835921 | chr11_70402085_+ | SINE | Alu | AluSz |
CAediting_835922 | chr11_70402123_+ | SINE | Alu | AluSz |
CAediting_835923 | chr11_70402124_+ | SINE | Alu | AluSz |
CAediting_835924 | chr11_70402128_+ | SINE | Alu | AluSz |
CAediting_835925 | chr11_70402132_+ | SINE | Alu | AluSz |
CAediting_835926 | chr11_70403232_+ | SINE | Alu | AluSc |
CAediting_835927 | chr11_70403288_+ | SINE | Alu | AluSc |
CAediting_835928 | chr11_70403289_+ | SINE | Alu | AluSc |
CAediting_835929 | chr11_70403292_+ | SINE | Alu | AluSc |
CAediting_835930 | chr11_70403306_+ | SINE | Alu | AluSc |
CAediting_835931 | chr11_70403315_+ | SINE | Alu | AluSc |
CAediting_835932 | chr11_70403318_+ | SINE | Alu | AluSc |
CAediting_835933 | chr11_70403328_+ | SINE | Alu | AluSc |
CAediting_835934 | chr11_70403354_+ | SINE | Alu | AluSc |
CAediting_835935 | chr11_70403355_+ | SINE | Alu | AluSc |
CAediting_835936 | chr11_70403372_+ | SINE | Alu | AluSc |
CAediting_835937 | chr11_70403389_+ | SINE | Alu | AluSc |
CAediting_835938 | chr11_70403449_+ | SINE | Alu | AluSc |
CAediting_835939 | chr11_70403461_+ | SINE | Alu | AluSc |
CAediting_835940 | chr11_70403904_+ | SINE | Alu | AluJr |
CAediting_835941 | chr11_70403948_+ | SINE | Alu | AluJr |
CAediting_835942 | chr11_70403955_+ | SINE | Alu | AluJr |
CAediting_835943 | chr11_70403981_+ | SINE | Alu | AluJr |
CAediting_835944 | chr11_70403993_+ | SINE | Alu | AluJr |
CAediting_835945 | chr11_70403998_+ | SINE | Alu | AluJr |
CAediting_835946 | chr11_70404010_+ | SINE | Alu | AluJr |
CAediting_835947 | chr11_70404028_+ | SINE | Alu | AluJr |
CAediting_835948 | chr11_70404030_+ | SINE | Alu | AluJr |
CAediting_835949 | chr11_70404741_+ | SINE | Alu | AluSp |
CAediting_835950 | chr11_70404747_+ | SINE | Alu | AluSp |
CAediting_835951 | chr11_70404748_+ | SINE | Alu | AluSp |
CAediting_835952 | chr11_70404774_+ | SINE | Alu | AluSp |
CAediting_835953 | chr11_70404813_+ | SINE | Alu | AluSp |
CAediting_835954 | chr11_70404847_+ | SINE | Alu | AluSp |
CAediting_835955 | chr11_70404855_+ | SINE | Alu | AluSp |
CAediting_835956 | chr11_70404881_+ | SINE | Alu | AluSp |
CAediting_835957 | chr11_70404882_+ | SINE | Alu | AluSp |
CAediting_835958 | chr11_70404946_+ | SINE | Alu | AluSp |
CAediting_835959 | chr11_70404947_+ | SINE | Alu | AluSp |
CAediting_835960 | chr11_70408417_+ | SINE | Alu | AluJo |
CAediting_835961 | chr11_70408515_+ | SINE | Alu | AluJo |
CAediting_835962 | chr11_70408660_+ | SINE | Alu | AluJo |
CAediting_835963 | chr11_70408662_+ | SINE | Alu | AluJo |
CAediting_835964 | chr11_70412187_+ | SINE | Alu | AluJo |
CAediting_835965 | chr11_70414332_+ | SINE | Alu | AluY |
CAediting_835966 | chr11_70416613_+ | SINE | Alu | AluSz6 |
CAediting_835967 | chr11_70416653_+ | SINE | Alu | AluSz6 |
CAediting_835968 | chr11_70426136_+ | SINE | Alu | AluY |
CAediting_835969 | chr11_70426152_+ | SINE | Alu | AluY |
CAediting_835970 | chr11_70426153_+ | SINE | Alu | AluY |
CAediting_835971 | chr11_70426220_+ | SINE | Alu | AluY |
CAediting_835972 | chr11_70426300_+ | SINE | Alu | AluY |
CAediting_835973 | chr11_70426313_+ | SINE | Alu | AluY |
CAediting_835974 | chr11_70426317_+ | SINE | Alu | AluY |
CAediting_835975 | chr11_70426322_+ | SINE | Alu | AluY |
CAediting_835976 | chr11_70426332_+ | SINE | Alu | AluY |
CAediting_835977 | chr11_70426463_+ | SINE | Alu | AluJo |
CAediting_835978 | chr11_70426465_+ | SINE | Alu | AluJo |
CAediting_835979 | chr11_70426519_+ | SINE | Alu | AluJo |
CAediting_835980 | chr11_70426537_+ | SINE | Alu | AluJo |
CAediting_835981 | chr11_70426549_+ | SINE | Alu | AluJo |
CAediting_835982 | chr11_70426556_+ | SINE | Alu | AluJo |
CAediting_835983 | chr11_70426562_+ | SINE | Alu | AluJo |
CAediting_835984 | chr11_70426580_+ | SINE | Alu | AluJo |
CAediting_835985 | chr11_70426606_+ | SINE | Alu | AluY |
CAediting_835986 | chr11_70426614_+ | SINE | Alu | AluY |
CAediting_835987 | chr11_70426638_+ | SINE | Alu | AluY |
CAediting_835988 | chr11_70426718_+ | SINE | Alu | AluY |
CAediting_835989 | chr11_70426728_+ | SINE | Alu | AluY |
CAediting_835990 | chr11_70426730_+ | SINE | Alu | AluY |
CAediting_835991 | chr11_70426861_+ | SINE | Alu | AluY |
CAediting_835992 | chr11_70426862_+ | SINE | Alu | AluY |
CAediting_835993 | chr11_70426874_+ | SINE | Alu | AluY |
CAediting_835994 | chr11_70426876_+ | SINE | Alu | AluY |
CAediting_835995 | chr11_70426919_+ | SINE | Alu | AluJo |
CAediting_835996 | chr11_70426926_+ | SINE | Alu | AluJo |
CAediting_835997 | chr11_70426945_+ | SINE | Alu | AluJo |
CAediting_835998 | chr11_70426965_+ | SINE | Alu | AluJo |
CAediting_835999 | chr11_70426970_+ | SINE | Alu | AluJo |
CAediting_836000 | chr11_70426971_+ | SINE | Alu | AluJo |
CAediting_836001 | chr11_70426975_+ | SINE | Alu | AluJo |
CAediting_836002 | chr11_70426997_+ | SINE | Alu | AluJo |
CAediting_836003 | chr11_70426998_+ | SINE | Alu | AluJo |
CAediting_836004 | chr11_70427088_+ | SINE | Alu | AluSx |
CAediting_836005 | chr11_70427094_+ | SINE | Alu | AluSx |
CAediting_836006 | chr11_70427095_+ | SINE | Alu | AluSx |
CAediting_836007 | chr11_70427103_+ | SINE | Alu | AluSx |
CAediting_836008 | chr11_70427135_+ | SINE | Alu | AluSx |
CAediting_836009 | chr11_70427163_+ | SINE | Alu | AluSx |
CAediting_836010 | chr11_70427164_+ | SINE | Alu | AluSx |
CAediting_836011 | chr11_70427172_+ | SINE | Alu | AluSx |
CAediting_836012 | chr11_70427173_+ | SINE | Alu | AluSx |
CAediting_836013 | chr11_70427174_+ | SINE | Alu | AluSx |
CAediting_836014 | chr11_70427185_+ | SINE | Alu | AluSx |
CAediting_836015 | chr11_70427188_+ | SINE | Alu | AluSx |
CAediting_836016 | chr11_70427189_+ | SINE | Alu | AluSx |
CAediting_836017 | chr11_70427190_+ | SINE | Alu | AluSx |
CAediting_836018 | chr11_70427200_+ | SINE | Alu | AluSx |
CAediting_836019 | chr11_70427229_+ | SINE | Alu | AluSx |
CAediting_836020 | chr11_70427230_+ | SINE | Alu | AluSx |
CAediting_836021 | chr11_70427239_+ | SINE | Alu | AluSx |
CAediting_836022 | chr11_70427246_+ | SINE | Alu | AluSx |
CAediting_836023 | chr11_70427252_+ | SINE | Alu | AluSx |
CAediting_836024 | chr11_70427271_+ | SINE | Alu | AluSx |
CAediting_836025 | chr11_70427281_+ | SINE | Alu | AluSx |
CAediting_836026 | chr11_70427283_+ | SINE | Alu | AluSx |
CAediting_836027 | chr11_70427290_+ | SINE | Alu | AluSx |
CAediting_836028 | chr11_70427301_+ | SINE | Alu | AluSx |
CAediting_836029 | chr11_70427309_+ | SINE | Alu | AluSx |
CAediting_836030 | chr11_70427338_+ | SINE | Alu | AluSx |
CAediting_836031 | chr11_70427339_+ | SINE | Alu | AluSx |
CAediting_836032 | chr11_70427345_+ | SINE | Alu | AluSx |
CAediting_836033 | chr11_70427363_+ | SINE | Alu | AluSx |
CAediting_836034 | chr11_70427379_+ | DNA | hAT-Charlie | Charlie1a |
CAediting_836035 | chr11_70427383_+ | DNA | hAT-Charlie | Charlie1a |
CAediting_836036 | chr11_70427385_+ | DNA | hAT-Charlie | Charlie1a |
CAediting_836037 | chr11_70427414_+ | DNA | hAT-Charlie | Charlie1a |
CAediting_836038 | chr11_70428190_+ | SINE | Alu | AluSc |
CAediting_836039 | chr11_70428227_+ | SINE | Alu | AluSc |
CAediting_836040 | chr11_70428229_+ | SINE | Alu | AluSc |
CAediting_836041 | chr11_70428245_+ | SINE | Alu | AluSc |
CAediting_836042 | chr11_70428266_+ | SINE | Alu | AluSc |
CAediting_836043 | chr11_70428283_+ | SINE | Alu | AluSc |
CAediting_836044 | chr11_70428295_+ | SINE | Alu | AluSc |
CAediting_836045 | chr11_70428322_+ | SINE | Alu | AluSc |
CAediting_836046 | chr11_70428353_+ | SINE | Alu | AluSc |
CAediting_836047 | chr11_70428366_+ | SINE | Alu | AluSc |
CAediting_836048 | chr11_70428375_+ | SINE | Alu | AluSc |
CAediting_836049 | chr11_70428416_+ | SINE | Alu | AluSc |
CAediting_836050 | chr11_70428425_+ | SINE | Alu | AluSc |
CAediting_836051 | chr11_70428426_+ | SINE | Alu | AluSc |
CAediting_836052 | chr11_70428438_+ | SINE | Alu | AluSc |
CAediting_836053 | chr11_70428454_+ | SINE | Alu | AluSc |
CAediting_836054 | chr11_70428545_+ | SINE | Alu | FLAM_C |
CAediting_836055 | chr11_70428547_+ | SINE | Alu | FLAM_C |
CAediting_836056 | chr11_70428573_+ | SINE | Alu | FLAM_C |
CAediting_836057 | chr11_70428583_+ | SINE | Alu | FLAM_C |
CAediting_836058 | chr11_70428595_+ | SINE | Alu | FLAM_C |
CAediting_836059 | chr11_70428683_+ | DNA | hAT-Charlie | Charlie1a |
Top |
RNA A-to-I editing events in the alternative splicing sites for CTTN |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for CTTN |
![]() * The grey color means N/A. |
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![]() * Click on the image to enlarge it in a new window. |
Top |
Protein coding region RNA A-to-I editings for CTTN |
![]() * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for CTTN |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_748296 | chr10_51299626_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-605-3p | 70435498 | 70435504 | 7mer-m8 | 70435484 | 70435505 | 155 | -22.4 |
CAediting_748296 | chr10_51299626_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-605-3p | 70435498 | 70435504 | 7mer-m8 | 70435484 | 70435505 | 155 | -22.4 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435954 | 70435960 | 7mer-m8 | 70435937 | 70435961 | 140 | -15.67 |
CAediting_1306323 | chr19_13836462_- | ENSG00000085733.14 | ENST00000346329 | hsa-miR-27a-3p | 70435721 | 70435727 | 7mer-m8 | 70435706 | 70435728 | 142 | -12.65 |
CAediting_1351755 | chr19_40282625_- | ENSG00000085733.14 | ENST00000346329 | hsa-miR-641 | 70436374 | 70436380 | 7mer-m8 | 70436358 | 70436381 | 140 | -15.59 |
CAediting_77128 | chr1_85133844_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-4423-3p | 70435505 | 70435511 | 7mer-m8 | 70435494 | 70435512 | 148 | -20.83 |
CAediting_77128 | chr1_85133844_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-4423-3p | 70435777 | 70435783 | 7mer-m8 | 70435764 | 70435784 | 159 | -16.28 |
CAediting_1399425 | chr20_1392958_- | ENSG00000085733.14 | ENST00000346329 | hsa-miR-6869-5p | 70435803 | 70435809 | 7mer-m8 | 70435790 | 70435810 | 150 | -20.64 |
CAediting_524911 | chr7_5495852_- | ENSG00000085733.14 | ENST00000346329 | hsa-miR-589-3p | 70436080 | 70436086 | 7mer-m8 | 70436059 | 70436087 | 156 | -27.11 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435954 | 70435960 | 7mer-m8 | 70435937 | 70435961 | 140 | -15.67 |
CAediting_1306323 | chr19_13836462_- | ENSG00000085733.14 | ENST00000301843 | hsa-miR-27a-3p | 70435721 | 70435727 | 7mer-m8 | 70435706 | 70435728 | 142 | -12.65 |
CAediting_1351755 | chr19_40282625_- | ENSG00000085733.14 | ENST00000301843 | hsa-miR-641 | 70436374 | 70436380 | 7mer-m8 | 70436358 | 70436381 | 140 | -15.59 |
CAediting_77128 | chr1_85133844_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-4423-3p | 70435505 | 70435511 | 7mer-m8 | 70435494 | 70435512 | 148 | -20.83 |
CAediting_77128 | chr1_85133844_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-4423-3p | 70435777 | 70435783 | 7mer-m8 | 70435764 | 70435784 | 159 | -16.28 |
CAediting_1399425 | chr20_1392958_- | ENSG00000085733.14 | ENST00000301843 | hsa-miR-6869-5p | 70435803 | 70435809 | 7mer-m8 | 70435790 | 70435810 | 150 | -20.64 |
CAediting_524911 | chr7_5495852_- | ENSG00000085733.14 | ENST00000301843 | hsa-miR-589-3p | 70436080 | 70436086 | 7mer-m8 | 70436059 | 70436087 | 156 | -27.11 |
CAediting_468389 | chr6_31355314_- | ENSG00000085733.14 | ENST00000346329 | hsa-miR-6891-5p | 70436105 | 70436111 | 7mer-m8 | 70436094 | 70436112 | 145 | -21.85 |
CAediting_468389 | chr6_31355314_- | ENSG00000085733.14 | ENST00000301843 | hsa-miR-6891-5p | 70436105 | 70436111 | 7mer-m8 | 70436094 | 70436112 | 145 | -21.85 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435405 | 70435412 | 8mer-1a | 70435390 | 70435412 | 153 | -11.96 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435405 | 70435412 | 8mer-1a | 70435390 | 70435412 | 153 | -11.96 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435405 | 70435412 | 8mer-1a | 70435403 | 70435428 | 151 | -13.03 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435405 | 70435412 | 8mer-1a | 70435403 | 70435428 | 151 | -13.03 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435421 | 70435427 | 7mer-m8 | 70435403 | 70435428 | 151 | -13.03 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435421 | 70435427 | 7mer-m8 | 70435403 | 70435428 | 151 | -13.03 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435764 | 70435770 | 7mer-m8 | 70435747 | 70435771 | 150 | -12.31 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435764 | 70435770 | 7mer-m8 | 70435747 | 70435771 | 150 | -12.31 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435234 | 70435240 | 7mer-m8 | 70435215 | 70435241 | 147 | -13.27 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000346329 | hsa-miR-548aa | 70435234 | 70435240 | 7mer-m8 | 70435215 | 70435241 | 147 | -13.27 |
CAediting_1351755 | chr19_40282625_- | ENSG00000085733.14 | ENST00000346329 | hsa-miR-641 | 70435973 | 70435980 | 8mer-1a | 70435957 | 70435980 | 144 | -10.67 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435405 | 70435412 | 8mer-1a | 70435390 | 70435412 | 153 | -11.96 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435405 | 70435412 | 8mer-1a | 70435390 | 70435412 | 153 | -11.96 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435405 | 70435412 | 8mer-1a | 70435403 | 70435428 | 151 | -13.03 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435405 | 70435412 | 8mer-1a | 70435403 | 70435428 | 151 | -13.03 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435421 | 70435427 | 7mer-m8 | 70435403 | 70435428 | 151 | -13.03 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435421 | 70435427 | 7mer-m8 | 70435403 | 70435428 | 151 | -13.03 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435764 | 70435770 | 7mer-m8 | 70435747 | 70435771 | 150 | -12.31 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435764 | 70435770 | 7mer-m8 | 70435747 | 70435771 | 150 | -12.31 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435234 | 70435240 | 7mer-m8 | 70435215 | 70435241 | 147 | -13.27 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000085733.14 | ENST00000301843 | hsa-miR-548aa | 70435234 | 70435240 | 7mer-m8 | 70435215 | 70435241 | 147 | -13.27 |
CAediting_1351755 | chr19_40282625_- | ENSG00000085733.14 | ENST00000301843 | hsa-miR-641 | 70435973 | 70435980 | 8mer-1a | 70435957 | 70435980 | 144 | -10.67 |
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The effects of the RNA editing to the stability of the RNA structures for CTTN |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CTTN |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for CTTN |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
ESCA | pathologic_stage | CAediting_835893 | chr11_70401713_+ | 0.012839245946093 | -0.30251553906797 |
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Relation with survival for CTTN |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for CTTN |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CTTN |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
CTTN | C0007137 | Squamous cell carcinoma | 1 | CTD_human |
CTTN | C0023531 | Leukoplakia | 1 | CTD_human |
CTTN | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human |
CTTN | C1704317 | Leukokeratosis | 1 | CTD_human |
CTTN | C3495559 | Juvenile arthritis | 1 | CTD_human |
CTTN | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human |
CTTN | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human |
CTTN | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |