Home

Download

Statistics

Examples

Help

Contact

Editing gene: DENND6A (CAeditome ID:201627)

Gene summary for DENND6A

Gene summary

Gene information	Gene symbol	DENND6A
	Gene ID	201627
	Gene name	DENN domain containing 6A
	Synonyms	AFI1A\|FAM116A
	Cytomap	3p14.3
	Type of gene	protein-coding
	Description	protein DENND6ADENN domain-containing protein 6ADENN/MADD domain containing 6Afamily with sequence similarity 116, member Aprotein FAM116A
	Modification date	20210518
	UniProtAcc	Q8IWF6
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
DENND6A	GO:0005085	Protein DENND6A	22595670
DENND6A	GO:2000049	Protein DENND6A	22595670
DENND6A	GO:0005737	Protein DENND6A	22595670
DENND6A	GO:0043231	Protein DENND6A	0000052
DENND6A	GO:0055037	Protein DENND6A	22595670

Top

RNA A-to-I events for DENND6A

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000174839.11

RNA A-to-I editing events in Cancer.

CAediting_288014(57626444, -), CAediting_288015(57626451, -), CAediting_288016(57626453, -), CAediting_288017(57626456, -), CAediting_288018(57626465, -), CAediting_288019(57626466, -), CAediting_288020(57626467, -), CAediting_288021(57626493, -), CAediting_288022(57626498, -), CAediting_288023(57626506, -), CAediting_288024(57626507, -), CAediting_288025(57626518, -), CAediting_288026(57626542, -), CAediting_288027(57626544, -), CAediting_288028(57626553, -), CAediting_288029(57626560, -), CAediting_288030(57626561, -), CAediting_288031(57626571, -), CAediting_288032(57626574, -), CAediting_288033(57626585, -), CAediting_288034(57626587, -), CAediting_288035(57626597, -), CAediting_288036(57626600, -), CAediting_288037(57626609, -), CAediting_288038(57626622, -), CAediting_288039(57626626, -), CAediting_288040(57626640, -), CAediting_288041(57626652, -), CAediting_288042(57626663, -), CAediting_288043(57626683, -), CAediting_288044(57626702, -), CAediting_288045(57626708, -), CAediting_288046(57627179, -), CAediting_288047(57627191, -), CAediting_288048(57627204, -), CAediting_288049(57627206, -), CAediting_288050(57627211, -), CAediting_288051(57627227, -), CAediting_288052(57627233, -), CAediting_288053(57627240, -), CAediting_288054(57627241, -), CAediting_288055(57627246, -), CAediting_288056(57627250, -), CAediting_288057(57627252, -), CAediting_288058(57627259, -), CAediting_288059(57627272, -), CAediting_288060(57627276, -), CAediting_288061(57627281, -), CAediting_288062(57627282, -), CAediting_288063(57627292, -), CAediting_288064(57627308, -), CAediting_288065(57627311, -), CAediting_288066(57627312, -), CAediting_288067(57627313, -), CAediting_288068(57627317, -), CAediting_288069(57627319, -), CAediting_288070(57627320, -), CAediting_288071(57627321, -), CAediting_288072(57627322, -), CAediting_288073(57627326, -), CAediting_288074(57627337, -), CAediting_288075(57627338, -), CAediting_288076(57627347, -), CAediting_288077(57627357, -), CAediting_288078(57627360, -), CAediting_288079(57627363, -), CAediting_288080(57627370, -), CAediting_288081(57627376, -), CAediting_288082(57627377, -), CAediting_288083(57627381, -), CAediting_288084(57627386, -), CAediting_288085(57627388, -), CAediting_288086(57627395, -), CAediting_288087(57627400, -), CAediting_288088(57627408, -), CAediting_288089(57627411, -), CAediting_288090(57627416, -), CAediting_288091(57627417, -), CAediting_288092(57656422, -), CAediting_288093(57658124, -), CAediting_288094(57660344, -), CAediting_288095(57660345, -), CAediting_288096(57660560, -), CAediting_288097(57660625, -), CAediting_288098(57660626, -), CAediting_288099(57660651, -), CAediting_288100(57662251, -), CAediting_288101(57662259, -), CAediting_288102(57662263, -), CAediting_288103(57662270, -), CAediting_288104(57662274, -), CAediting_288105(57662280, -), CAediting_288106(57662288, -), CAediting_288107(57662293, -), CAediting_288108(57662315, -), CAediting_288109(57662329, -), CAediting_288110(57662337, -), CAediting_288111(57662339, -), CAediting_288112(57662351, -), CAediting_288113(57662358, -), CAediting_288114(57662396, -), CAediting_288115(57662397, -), CAediting_288116(57662398, -), CAediting_288117(57662399, -), CAediting_288118(57662406, -), CAediting_288119(57662407, -), CAediting_288120(57662419, -), CAediting_288121(57662435, -), CAediting_288122(57662445, -), CAediting_288123(57662469, -), CAediting_288124(57662475, -), CAediting_288125(57662476, -), CAediting_288126(57662482, -), CAediting_288127(57662492, -), CAediting_288128(57663285, -), CAediting_288129(57664591, -), CAediting_288130(57667223, -), CAediting_288131(57667224, -), CAediting_288132(57667309, -), CAediting_288133(57667980, -), CAediting_288134(57668059, -), CAediting_288135(57668930, -), CAediting_288136(57668997, -), CAediting_288137(57669040, -), CAediting_288138(57669145, -), CAediting_288139(57669526, -), CAediting_288140(57672617, -), CAediting_288141(57672683, -), CAediting_288142(57673805, -), CAediting_288143(57673812, -), CAediting_288144(57673818, -), CAediting_288145(57673823, -), CAediting_288146(57673894, -), CAediting_288147(57673957, -), CAediting_288148(57674126, -), CAediting_288149(57674451, -), CAediting_288150(57674465, -), CAediting_288151(57674468, -), CAediting_288152(57674493, -), CAediting_288153(57674509, -), CAediting_288154(57674519, -), CAediting_288155(57674531, -), CAediting_288156(57676059, -), CAediting_288157(57676134, -), CAediting_288158(57676190, -), CAediting_288159(57676952, -), CAediting_288160(57676961, -), CAediting_288161(57676962, -), CAediting_288162(57677090, -), CAediting_288163(57677468, -), CAediting_288164(57677493, -), CAediting_288165(57677508, -), CAediting_288166(57677519, -), CAediting_288167(57677524, -), CAediting_288168(57677533, -), CAediting_288169(57677544, -), CAediting_288170(57677546, -), CAediting_288171(57677551, -), CAediting_288172(57677552, -), CAediting_288173(57677557, -), CAediting_288174(57677560, -), CAediting_288175(57677564, -), CAediting_288176(57677574, -), CAediting_288177(57677596, -), CAediting_288178(57677600, -), CAediting_288179(57677603, -), CAediting_288180(57677611, -), CAediting_288181(57677612, -), CAediting_288182(57677613, -), CAediting_288183(57677616, -), CAediting_288184(57677618, -), CAediting_288185(57677622, -), CAediting_288186(57677624, -), CAediting_288187(57677631, -), CAediting_288188(57677632, -), CAediting_288189(57677649, -), CAediting_288190(57677663, -), CAediting_288191(57677668, -), CAediting_288192(57677679, -), CAediting_288193(57677682, -), CAediting_288194(57677693, -), CAediting_288195(57677709, -), CAediting_288196(57677710, -), CAediting_288197(57677720, -), CAediting_288198(57677744, -), CAediting_288199(57678890, -), CAediting_288200(57678982, -), CAediting_288201(57679041, -), CAediting_288202(57679063, -), CAediting_288203(57682709, -), CAediting_288204(57682710, -), CAediting_288205(57682951, -), CAediting_288206(57683910, -), CAediting_288207(57683911, -), CAediting_288208(57683973, -), CAediting_288209(57684066, -), CAediting_288210(57684411, -), CAediting_288211(57684612, -), CAediting_288212(57684662, -), CAediting_288213(57684671, -), CAediting_288214(57684675, -), CAediting_288215(57684761, -), CAediting_288216(57684886, -), CAediting_288217(57685042, -), CAediting_288218(57685118, -), CAediting_288219(57685169, -), CAediting_288220(57687697, -), CAediting_288221(57687715, -), CAediting_288222(57687716, -), CAediting_288223(57687730, -), CAediting_288224(57687778, -), CAediting_288225(57687851, -), CAediting_288226(57689051, -), CAediting_288227(57689926, -), CAediting_288228(57690515, -), CAediting_288229(57690560, -), CAediting_288230(57690562, -),

Top

RNA editing positional annotations for DENND6A using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_288014	chr3_57626444_-	UTR3
CAediting_288015	chr3_57626451_-	UTR3
CAediting_288016	chr3_57626453_-	UTR3
CAediting_288017	chr3_57626456_-	UTR3
CAediting_288018	chr3_57626465_-	UTR3
CAediting_288019	chr3_57626466_-	UTR3
CAediting_288020	chr3_57626467_-	UTR3
CAediting_288021	chr3_57626493_-	UTR3
CAediting_288022	chr3_57626498_-	UTR3
CAediting_288023	chr3_57626506_-	UTR3
CAediting_288024	chr3_57626507_-	UTR3
CAediting_288025	chr3_57626518_-	UTR3
CAediting_288026	chr3_57626542_-	UTR3
CAediting_288027	chr3_57626544_-	UTR3
CAediting_288028	chr3_57626553_-	UTR3
CAediting_288029	chr3_57626560_-	UTR3
CAediting_288030	chr3_57626561_-	UTR3
CAediting_288031	chr3_57626571_-	UTR3
CAediting_288032	chr3_57626574_-	UTR3
CAediting_288033	chr3_57626585_-	UTR3
CAediting_288034	chr3_57626587_-	UTR3
CAediting_288035	chr3_57626597_-	UTR3
CAediting_288036	chr3_57626600_-	UTR3
CAediting_288037	chr3_57626609_-	UTR3
CAediting_288038	chr3_57626622_-	UTR3
CAediting_288039	chr3_57626626_-	UTR3
CAediting_288040	chr3_57626640_-	UTR3
CAediting_288041	chr3_57626652_-	UTR3
CAediting_288042	chr3_57626663_-	UTR3
CAediting_288043	chr3_57626683_-	UTR3
CAediting_288044	chr3_57626702_-	UTR3
CAediting_288045	chr3_57626708_-	UTR3
CAediting_288046	chr3_57627179_-	UTR3
CAediting_288047	chr3_57627191_-	UTR3
CAediting_288048	chr3_57627204_-	UTR3
CAediting_288049	chr3_57627206_-	UTR3
CAediting_288050	chr3_57627211_-	UTR3
CAediting_288051	chr3_57627227_-	UTR3
CAediting_288052	chr3_57627233_-	UTR3
CAediting_288053	chr3_57627240_-	UTR3
CAediting_288054	chr3_57627241_-	UTR3
CAediting_288055	chr3_57627246_-	UTR3
CAediting_288056	chr3_57627250_-	UTR3
CAediting_288057	chr3_57627252_-	UTR3
CAediting_288058	chr3_57627259_-	UTR3
CAediting_288059	chr3_57627272_-	UTR3
CAediting_288060	chr3_57627276_-	UTR3
CAediting_288061	chr3_57627281_-	UTR3
CAediting_288062	chr3_57627282_-	UTR3
CAediting_288063	chr3_57627292_-	UTR3
CAediting_288064	chr3_57627308_-	UTR3
CAediting_288065	chr3_57627311_-	UTR3
CAediting_288066	chr3_57627312_-	UTR3
CAediting_288067	chr3_57627313_-	UTR3
CAediting_288068	chr3_57627317_-	UTR3
CAediting_288069	chr3_57627319_-	UTR3
CAediting_288070	chr3_57627320_-	UTR3
CAediting_288071	chr3_57627321_-	UTR3
CAediting_288072	chr3_57627322_-	UTR3
CAediting_288073	chr3_57627326_-	UTR3
CAediting_288074	chr3_57627337_-	UTR3
CAediting_288075	chr3_57627338_-	UTR3
CAediting_288076	chr3_57627347_-	UTR3
CAediting_288077	chr3_57627357_-	UTR3
CAediting_288078	chr3_57627360_-	UTR3
CAediting_288079	chr3_57627363_-	UTR3
CAediting_288080	chr3_57627370_-	UTR3
CAediting_288081	chr3_57627376_-	UTR3
CAediting_288082	chr3_57627377_-	UTR3
CAediting_288083	chr3_57627381_-	UTR3
CAediting_288084	chr3_57627386_-	UTR3
CAediting_288085	chr3_57627388_-	UTR3
CAediting_288086	chr3_57627395_-	UTR3
CAediting_288087	chr3_57627400_-	UTR3
CAediting_288088	chr3_57627408_-	UTR3
CAediting_288089	chr3_57627411_-	UTR3
CAediting_288090	chr3_57627416_-	UTR3
CAediting_288091	chr3_57627417_-	UTR3
CAediting_288092	chr3_57656422_-	intronic
CAediting_288093	chr3_57658124_-	ncRNA_intronic
CAediting_288094	chr3_57660344_-	ncRNA_intronic
CAediting_288095	chr3_57660345_-	ncRNA_intronic
CAediting_288096	chr3_57660560_-	ncRNA_intronic
CAediting_288097	chr3_57660625_-	ncRNA_intronic
CAediting_288098	chr3_57660626_-	ncRNA_intronic
CAediting_288099	chr3_57660651_-	ncRNA_intronic
CAediting_288100	chr3_57662251_-	ncRNA_intronic
CAediting_288101	chr3_57662259_-	ncRNA_intronic
CAediting_288102	chr3_57662263_-	ncRNA_intronic
CAediting_288103	chr3_57662270_-	ncRNA_intronic
CAediting_288104	chr3_57662274_-	ncRNA_intronic
CAediting_288105	chr3_57662280_-	ncRNA_intronic
CAediting_288106	chr3_57662288_-	ncRNA_intronic
CAediting_288107	chr3_57662293_-	ncRNA_intronic
CAediting_288108	chr3_57662315_-	ncRNA_intronic
CAediting_288109	chr3_57662329_-	ncRNA_intronic
CAediting_288110	chr3_57662337_-	ncRNA_intronic
CAediting_288111	chr3_57662339_-	ncRNA_intronic
CAediting_288112	chr3_57662351_-	ncRNA_intronic
CAediting_288113	chr3_57662358_-	ncRNA_intronic
CAediting_288114	chr3_57662396_-	ncRNA_intronic
CAediting_288115	chr3_57662397_-	ncRNA_intronic
CAediting_288116	chr3_57662398_-	ncRNA_intronic
CAediting_288117	chr3_57662399_-	ncRNA_intronic
CAediting_288118	chr3_57662406_-	ncRNA_intronic
CAediting_288119	chr3_57662407_-	ncRNA_intronic
CAediting_288120	chr3_57662419_-	ncRNA_intronic
CAediting_288121	chr3_57662435_-	ncRNA_intronic
CAediting_288122	chr3_57662445_-	ncRNA_intronic
CAediting_288123	chr3_57662469_-	ncRNA_intronic
CAediting_288124	chr3_57662475_-	ncRNA_intronic
CAediting_288125	chr3_57662476_-	ncRNA_intronic
CAediting_288126	chr3_57662482_-	ncRNA_intronic
CAediting_288127	chr3_57662492_-	ncRNA_intronic
CAediting_288128	chr3_57663285_-	ncRNA_intronic
CAediting_288129	chr3_57664591_-	ncRNA_intronic
CAediting_288130	chr3_57667223_-	ncRNA_intronic
CAediting_288131	chr3_57667224_-	ncRNA_intronic
CAediting_288132	chr3_57667309_-	ncRNA_intronic
CAediting_288133	chr3_57667980_-	ncRNA_intronic
CAediting_288134	chr3_57668059_-	ncRNA_intronic
CAediting_288135	chr3_57668930_-	ncRNA_intronic
CAediting_288136	chr3_57668997_-	ncRNA_intronic
CAediting_288137	chr3_57669040_-	ncRNA_intronic
CAediting_288138	chr3_57669145_-	ncRNA_intronic
CAediting_288139	chr3_57669526_-	ncRNA_intronic
CAediting_288140	chr3_57672617_-	ncRNA_intronic
CAediting_288141	chr3_57672683_-	ncRNA_intronic
CAediting_288142	chr3_57673805_-	ncRNA_intronic
CAediting_288143	chr3_57673812_-	ncRNA_intronic
CAediting_288144	chr3_57673818_-	ncRNA_intronic
CAediting_288145	chr3_57673823_-	ncRNA_intronic
CAediting_288146	chr3_57673894_-	ncRNA_intronic
CAediting_288147	chr3_57673957_-	ncRNA_intronic
CAediting_288148	chr3_57674126_-	ncRNA_intronic
CAediting_288149	chr3_57674451_-	ncRNA_intronic
CAediting_288150	chr3_57674465_-	ncRNA_intronic
CAediting_288151	chr3_57674468_-	ncRNA_intronic
CAediting_288152	chr3_57674493_-	ncRNA_intronic
CAediting_288153	chr3_57674509_-	ncRNA_intronic
CAediting_288154	chr3_57674519_-	ncRNA_intronic
CAediting_288155	chr3_57674531_-	ncRNA_intronic
CAediting_288156	chr3_57676059_-	ncRNA_intronic
CAediting_288157	chr3_57676134_-	ncRNA_intronic
CAediting_288158	chr3_57676190_-	ncRNA_intronic
CAediting_288159	chr3_57676952_-	ncRNA_intronic
CAediting_288160	chr3_57676961_-	ncRNA_intronic
CAediting_288161	chr3_57676962_-	ncRNA_intronic
CAediting_288162	chr3_57677090_-	ncRNA_intronic
CAediting_288163	chr3_57677468_-	ncRNA_intronic
CAediting_288164	chr3_57677493_-	ncRNA_intronic
CAediting_288165	chr3_57677508_-	ncRNA_intronic
CAediting_288166	chr3_57677519_-	ncRNA_intronic
CAediting_288167	chr3_57677524_-	ncRNA_intronic
CAediting_288168	chr3_57677533_-	ncRNA_intronic
CAediting_288169	chr3_57677544_-	ncRNA_intronic
CAediting_288170	chr3_57677546_-	ncRNA_intronic
CAediting_288171	chr3_57677551_-	ncRNA_intronic
CAediting_288172	chr3_57677552_-	ncRNA_intronic
CAediting_288173	chr3_57677557_-	ncRNA_intronic
CAediting_288174	chr3_57677560_-	ncRNA_intronic
CAediting_288175	chr3_57677564_-	ncRNA_intronic
CAediting_288176	chr3_57677574_-	ncRNA_intronic
CAediting_288177	chr3_57677596_-	ncRNA_intronic
CAediting_288178	chr3_57677600_-	ncRNA_intronic
CAediting_288179	chr3_57677603_-	ncRNA_intronic
CAediting_288180	chr3_57677611_-	ncRNA_intronic
CAediting_288181	chr3_57677612_-	ncRNA_intronic
CAediting_288182	chr3_57677613_-	ncRNA_intronic
CAediting_288183	chr3_57677616_-	ncRNA_intronic
CAediting_288184	chr3_57677618_-	ncRNA_intronic
CAediting_288185	chr3_57677622_-	ncRNA_intronic
CAediting_288186	chr3_57677624_-	ncRNA_intronic
CAediting_288187	chr3_57677631_-	ncRNA_intronic
CAediting_288188	chr3_57677632_-	ncRNA_intronic
CAediting_288189	chr3_57677649_-	ncRNA_intronic
CAediting_288190	chr3_57677663_-	ncRNA_intronic
CAediting_288191	chr3_57677668_-	ncRNA_intronic
CAediting_288192	chr3_57677679_-	ncRNA_intronic
CAediting_288193	chr3_57677682_-	ncRNA_intronic
CAediting_288194	chr3_57677693_-	ncRNA_intronic
CAediting_288195	chr3_57677709_-	ncRNA_intronic
CAediting_288196	chr3_57677710_-	ncRNA_intronic
CAediting_288197	chr3_57677720_-	ncRNA_intronic
CAediting_288198	chr3_57677744_-	ncRNA_intronic
CAediting_288199	chr3_57678890_-	ncRNA_intronic
CAediting_288200	chr3_57678982_-	ncRNA_intronic
CAediting_288201	chr3_57679041_-	ncRNA_intronic
CAediting_288202	chr3_57679063_-	ncRNA_intronic
CAediting_288203	chr3_57682709_-	ncRNA_intronic
CAediting_288204	chr3_57682710_-	ncRNA_intronic
CAediting_288205	chr3_57682951_-	ncRNA_intronic
CAediting_288206	chr3_57683910_-	ncRNA_intronic
CAediting_288207	chr3_57683911_-	ncRNA_intronic
CAediting_288208	chr3_57683973_-	ncRNA_intronic
CAediting_288209	chr3_57684066_-	ncRNA_intronic
CAediting_288210	chr3_57684411_-	ncRNA_intronic
CAediting_288211	chr3_57684612_-	ncRNA_intronic
CAediting_288212	chr3_57684662_-	ncRNA_intronic
CAediting_288213	chr3_57684671_-	ncRNA_intronic
CAediting_288214	chr3_57684675_-	ncRNA_intronic
CAediting_288215	chr3_57684761_-	ncRNA_intronic
CAediting_288216	chr3_57684886_-	ncRNA_intronic
CAediting_288217	chr3_57685042_-	ncRNA_intronic
CAediting_288218	chr3_57685118_-	ncRNA_intronic
CAediting_288219	chr3_57685169_-	ncRNA_intronic
CAediting_288220	chr3_57687697_-	ncRNA_intronic
CAediting_288221	chr3_57687715_-	ncRNA_intronic
CAediting_288222	chr3_57687716_-	ncRNA_intronic
CAediting_288223	chr3_57687730_-	ncRNA_intronic
CAediting_288224	chr3_57687778_-	ncRNA_intronic
CAediting_288225	chr3_57687851_-	ncRNA_intronic
CAediting_288226	chr3_57689051_-	ncRNA_intronic
CAediting_288227	chr3_57689926_-	ncRNA_intronic
CAediting_288228	chr3_57690515_-	ncRNA_intronic
CAediting_288229	chr3_57690560_-	ncRNA_intronic
CAediting_288230	chr3_57690562_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_288014	chr3_57626444_-	SINE	Alu	AluSp
CAediting_288015	chr3_57626451_-	SINE	Alu	AluSp
CAediting_288016	chr3_57626453_-	SINE	Alu	AluSp
CAediting_288017	chr3_57626456_-	SINE	Alu	AluSp
CAediting_288018	chr3_57626465_-	SINE	Alu	AluSp
CAediting_288019	chr3_57626466_-	SINE	Alu	AluSp
CAediting_288020	chr3_57626467_-	SINE	Alu	AluSp
CAediting_288021	chr3_57626493_-	SINE	Alu	AluSp
CAediting_288022	chr3_57626498_-	SINE	Alu	AluSp
CAediting_288023	chr3_57626506_-	SINE	Alu	AluSp
CAediting_288024	chr3_57626507_-	SINE	Alu	AluSp
CAediting_288025	chr3_57626518_-	SINE	Alu	AluSp
CAediting_288026	chr3_57626542_-	SINE	Alu	AluSp
CAediting_288027	chr3_57626544_-	SINE	Alu	AluSp
CAediting_288028	chr3_57626553_-	SINE	Alu	AluSp
CAediting_288029	chr3_57626560_-	SINE	Alu	AluSp
CAediting_288030	chr3_57626561_-	SINE	Alu	AluSp
CAediting_288031	chr3_57626571_-	SINE	Alu	AluSp
CAediting_288032	chr3_57626574_-	SINE	Alu	AluSp
CAediting_288033	chr3_57626585_-	SINE	Alu	AluSp
CAediting_288034	chr3_57626587_-	SINE	Alu	AluSp
CAediting_288035	chr3_57626597_-	SINE	Alu	AluSp
CAediting_288036	chr3_57626600_-	SINE	Alu	AluSp
CAediting_288037	chr3_57626609_-	SINE	Alu	AluSp
CAediting_288038	chr3_57626622_-	SINE	Alu	AluSp
CAediting_288039	chr3_57626626_-	SINE	Alu	AluSp
CAediting_288040	chr3_57626640_-	SINE	Alu	AluSp
CAediting_288041	chr3_57626652_-	SINE	Alu	AluSp
CAediting_288042	chr3_57626663_-	SINE	Alu	AluSp
CAediting_288043	chr3_57626683_-	SINE	Alu	AluSp
CAediting_288044	chr3_57626702_-	SINE	Alu	AluSp
CAediting_288045	chr3_57626708_-	SINE	Alu	AluSp
CAediting_288046	chr3_57627179_-	SINE	Alu	AluSz
CAediting_288047	chr3_57627191_-	SINE	Alu	AluSz
CAediting_288048	chr3_57627204_-	SINE	Alu	AluSz
CAediting_288049	chr3_57627206_-	SINE	Alu	AluSz
CAediting_288050	chr3_57627211_-	SINE	Alu	AluSz
CAediting_288051	chr3_57627227_-	SINE	Alu	AluSz
CAediting_288052	chr3_57627233_-	SINE	Alu	AluSz
CAediting_288053	chr3_57627240_-	SINE	Alu	AluSz
CAediting_288054	chr3_57627241_-	SINE	Alu	AluSz
CAediting_288055	chr3_57627246_-	SINE	Alu	AluSz
CAediting_288056	chr3_57627250_-	SINE	Alu	AluSz
CAediting_288057	chr3_57627252_-	SINE	Alu	AluSz
CAediting_288058	chr3_57627259_-	SINE	Alu	AluSz
CAediting_288059	chr3_57627272_-	SINE	Alu	AluSz
CAediting_288060	chr3_57627276_-	SINE	Alu	AluSz
CAediting_288061	chr3_57627281_-	SINE	Alu	AluSz
CAediting_288062	chr3_57627282_-	SINE	Alu	AluSz
CAediting_288063	chr3_57627292_-	SINE	Alu	AluSz
CAediting_288064	chr3_57627308_-	SINE	Alu	AluSz
CAediting_288065	chr3_57627311_-	SINE	Alu	AluSz
CAediting_288066	chr3_57627312_-	SINE	Alu	AluSz
CAediting_288067	chr3_57627313_-	SINE	Alu	AluSz
CAediting_288068	chr3_57627317_-	SINE	Alu	AluSz
CAediting_288069	chr3_57627319_-	SINE	Alu	AluSz
CAediting_288070	chr3_57627320_-	SINE	Alu	AluSz
CAediting_288071	chr3_57627321_-	SINE	Alu	AluSz
CAediting_288072	chr3_57627322_-	SINE	Alu	AluSz
CAediting_288073	chr3_57627326_-	SINE	Alu	AluSz
CAediting_288074	chr3_57627337_-	SINE	Alu	AluSz
CAediting_288075	chr3_57627338_-	SINE	Alu	AluSz
CAediting_288076	chr3_57627347_-	SINE	Alu	AluSz
CAediting_288077	chr3_57627357_-	SINE	Alu	AluSz
CAediting_288078	chr3_57627360_-	SINE	Alu	AluSz
CAediting_288079	chr3_57627363_-	SINE	Alu	AluSz
CAediting_288080	chr3_57627370_-	SINE	Alu	AluSz
CAediting_288081	chr3_57627376_-	SINE	Alu	AluSz
CAediting_288082	chr3_57627377_-	SINE	Alu	AluSz
CAediting_288083	chr3_57627381_-	SINE	Alu	AluSz
CAediting_288084	chr3_57627386_-	SINE	Alu	AluSz
CAediting_288085	chr3_57627388_-	SINE	Alu	AluSz
CAediting_288086	chr3_57627395_-	SINE	Alu	AluSz
CAediting_288087	chr3_57627400_-	SINE	Alu	AluSz
CAediting_288088	chr3_57627408_-	SINE	Alu	AluSz
CAediting_288089	chr3_57627411_-	SINE	Alu	AluSz
CAediting_288090	chr3_57627416_-	SINE	Alu	AluSz
CAediting_288091	chr3_57627417_-	SINE	Alu	AluSz
CAediting_288092	chr3_57656422_-	LINE	L1	L1ME1
CAediting_288093	chr3_57658124_-	SINE	Alu	AluY
CAediting_288094	chr3_57660344_-	SINE	Alu	AluJb
CAediting_288095	chr3_57660345_-	SINE	Alu	AluJb
CAediting_288096	chr3_57660560_-	SINE	Alu	AluJb
CAediting_288097	chr3_57660625_-	SINE	Alu	AluJb
CAediting_288098	chr3_57660626_-	SINE	Alu	AluJb
CAediting_288099	chr3_57660651_-	SINE	Alu	AluJb
CAediting_288100	chr3_57662251_-	SINE	Alu	AluJb
CAediting_288101	chr3_57662259_-	SINE	Alu	AluJb
CAediting_288102	chr3_57662263_-	SINE	Alu	AluJb
CAediting_288103	chr3_57662270_-	SINE	Alu	AluJb
CAediting_288104	chr3_57662274_-	SINE	Alu	AluJb
CAediting_288105	chr3_57662280_-	SINE	Alu	AluJb
CAediting_288106	chr3_57662288_-	SINE	Alu	AluJb
CAediting_288107	chr3_57662293_-	SINE	Alu	AluJb
CAediting_288108	chr3_57662315_-	SINE	Alu	AluJb
CAediting_288109	chr3_57662329_-	SINE	Alu	AluJb
CAediting_288110	chr3_57662337_-	SINE	Alu	AluJb
CAediting_288111	chr3_57662339_-	SINE	Alu	AluJb
CAediting_288112	chr3_57662351_-	SINE	Alu	AluJb
CAediting_288113	chr3_57662358_-	SINE	Alu	AluJb
CAediting_288114	chr3_57662396_-	SINE	Alu	AluJb
CAediting_288115	chr3_57662397_-	SINE	Alu	AluJb
CAediting_288116	chr3_57662398_-	SINE	Alu	AluJb
CAediting_288117	chr3_57662399_-	SINE	Alu	AluJb
CAediting_288118	chr3_57662406_-	SINE	Alu	AluJb
CAediting_288119	chr3_57662407_-	SINE	Alu	AluJb
CAediting_288120	chr3_57662419_-	SINE	Alu	AluJb
CAediting_288121	chr3_57662435_-	SINE	Alu	AluJb
CAediting_288122	chr3_57662445_-	SINE	Alu	AluJb
CAediting_288123	chr3_57662469_-	SINE	Alu	AluJb
CAediting_288124	chr3_57662475_-	SINE	Alu	AluJb
CAediting_288125	chr3_57662476_-	SINE	Alu	AluJb
CAediting_288126	chr3_57662482_-	SINE	Alu	AluJb
CAediting_288127	chr3_57662492_-	SINE	Alu	AluJb
CAediting_288128	chr3_57663285_-	SINE	Alu	AluSg7
CAediting_288129	chr3_57664591_-	SINE	Alu	AluSc5
CAediting_288130	chr3_57667223_-	SINE	Alu	AluSx
CAediting_288131	chr3_57667224_-	SINE	Alu	AluSx
CAediting_288132	chr3_57667309_-	SINE	Alu	AluSx
CAediting_288133	chr3_57667980_-	SINE	Alu	AluSx1
CAediting_288134	chr3_57668059_-	SINE	Alu	AluSx1
CAediting_288135	chr3_57668930_-	SINE	Alu	AluSz
CAediting_288136	chr3_57668997_-	SINE	Alu	AluSz
CAediting_288137	chr3_57669040_-	SINE	Alu	AluSz
CAediting_288138	chr3_57669145_-	SINE	Alu	AluSz
CAediting_288139	chr3_57669526_-	SINE	Alu	AluY
CAediting_288140	chr3_57672617_-	SINE	Alu	AluSz
CAediting_288141	chr3_57672683_-	SINE	Alu	AluSz
CAediting_288142	chr3_57673805_-	SINE	Alu	AluSq2
CAediting_288143	chr3_57673812_-	SINE	Alu	AluSq2
CAediting_288144	chr3_57673818_-	SINE	Alu	AluSq2
CAediting_288145	chr3_57673823_-	SINE	Alu	AluSq2
CAediting_288146	chr3_57673894_-	SINE	Alu	AluSq2
CAediting_288147	chr3_57673957_-	SINE	Alu	AluSq2
CAediting_288148	chr3_57674126_-	SINE	Alu	AluYc
CAediting_288149	chr3_57674451_-	SINE	Alu	AluSg
CAediting_288150	chr3_57674465_-	SINE	Alu	AluSg
CAediting_288151	chr3_57674468_-	SINE	Alu	AluSg
CAediting_288152	chr3_57674493_-	SINE	Alu	AluSg
CAediting_288153	chr3_57674509_-	SINE	Alu	AluSg
CAediting_288154	chr3_57674519_-	SINE	Alu	AluSg
CAediting_288155	chr3_57674531_-	SINE	Alu	AluSg
CAediting_288156	chr3_57676059_-	SINE	Alu	AluSz6
CAediting_288157	chr3_57676134_-	SINE	Alu	AluSz6
CAediting_288158	chr3_57676190_-	SINE	Alu	AluSz6
CAediting_288159	chr3_57676952_-	SINE	Alu	AluSz
CAediting_288160	chr3_57676961_-	SINE	Alu	AluSz
CAediting_288161	chr3_57676962_-	SINE	Alu	AluSz
CAediting_288162	chr3_57677090_-	SINE	Alu	AluSz
CAediting_288163	chr3_57677468_-	SINE	Alu	AluJr
CAediting_288164	chr3_57677493_-	SINE	Alu	AluJr
CAediting_288165	chr3_57677508_-	SINE	Alu	AluJr
CAediting_288166	chr3_57677519_-	SINE	Alu	AluJr
CAediting_288167	chr3_57677524_-	SINE	Alu	AluJr
CAediting_288168	chr3_57677533_-	SINE	Alu	AluJr
CAediting_288169	chr3_57677544_-	SINE	Alu	AluJr
CAediting_288170	chr3_57677546_-	SINE	Alu	AluJr
CAediting_288171	chr3_57677551_-	SINE	Alu	AluJr
CAediting_288172	chr3_57677552_-	SINE	Alu	AluJr
CAediting_288173	chr3_57677557_-	SINE	Alu	AluJr
CAediting_288174	chr3_57677560_-	SINE	Alu	AluJr
CAediting_288175	chr3_57677564_-	SINE	Alu	AluJr
CAediting_288176	chr3_57677574_-	SINE	Alu	AluJr
CAediting_288177	chr3_57677596_-	SINE	Alu	AluJr
CAediting_288178	chr3_57677600_-	SINE	Alu	AluJr
CAediting_288179	chr3_57677603_-	SINE	Alu	AluJr
CAediting_288180	chr3_57677611_-	SINE	Alu	AluJr
CAediting_288181	chr3_57677612_-	SINE	Alu	AluJr
CAediting_288182	chr3_57677613_-	SINE	Alu	AluJr
CAediting_288183	chr3_57677616_-	SINE	Alu	AluJr
CAediting_288184	chr3_57677618_-	SINE	Alu	AluJr
CAediting_288185	chr3_57677622_-	SINE	Alu	AluJr
CAediting_288186	chr3_57677624_-	SINE	Alu	AluJr
CAediting_288187	chr3_57677631_-	SINE	Alu	AluJr
CAediting_288188	chr3_57677632_-	SINE	Alu	AluJr
CAediting_288189	chr3_57677649_-	SINE	Alu	AluJr
CAediting_288190	chr3_57677663_-	SINE	Alu	AluJr
CAediting_288191	chr3_57677668_-	SINE	Alu	AluJr
CAediting_288192	chr3_57677679_-	SINE	Alu	AluJr
CAediting_288193	chr3_57677682_-	SINE	Alu	AluJr
CAediting_288194	chr3_57677693_-	SINE	Alu	AluJr
CAediting_288195	chr3_57677709_-	SINE	Alu	AluJr
CAediting_288196	chr3_57677710_-	SINE	Alu	AluJr
CAediting_288197	chr3_57677720_-	SINE	Alu	AluJr
CAediting_288199	chr3_57678890_-	SINE	Alu	AluSz6
CAediting_288200	chr3_57678982_-	SINE	Alu	AluSz6
CAediting_288201	chr3_57679041_-	SINE	Alu	AluSz6
CAediting_288202	chr3_57679063_-	SINE	Alu	AluSz6
CAediting_288203	chr3_57682709_-	SINE	Alu	AluSz
CAediting_288204	chr3_57682710_-	SINE	Alu	AluSz
CAediting_288205	chr3_57682951_-	SINE	Alu	AluSz
CAediting_288206	chr3_57683910_-	SINE	Alu	AluSg7
CAediting_288207	chr3_57683911_-	SINE	Alu	AluSg7
CAediting_288208	chr3_57683973_-	SINE	Alu	AluSg7
CAediting_288209	chr3_57684066_-	SINE	Alu	AluSg7
CAediting_288210	chr3_57684411_-	SINE	Alu	AluSg
CAediting_288211	chr3_57684612_-	SINE	Alu	AluJb
CAediting_288212	chr3_57684662_-	SINE	Alu	AluJb
CAediting_288213	chr3_57684671_-	SINE	Alu	AluJb
CAediting_288214	chr3_57684675_-	SINE	Alu	AluJb
CAediting_288215	chr3_57684761_-	SINE	Alu	AluJb
CAediting_288216	chr3_57684886_-	SINE	Alu	AluJo
CAediting_288217	chr3_57685042_-	SINE	Alu	AluSx
CAediting_288218	chr3_57685118_-	SINE	Alu	AluSx
CAediting_288219	chr3_57685169_-	SINE	Alu	AluSx
CAediting_288220	chr3_57687697_-	SINE	Alu	AluJr
CAediting_288221	chr3_57687715_-	SINE	Alu	AluJr
CAediting_288222	chr3_57687716_-	SINE	Alu	AluJr
CAediting_288223	chr3_57687730_-	SINE	Alu	AluJr
CAediting_288224	chr3_57687778_-	SINE	Alu	AluJr
CAediting_288225	chr3_57687851_-	SINE	Alu	AluJr
CAediting_288226	chr3_57689051_-	SINE	Alu	AluSc
CAediting_288227	chr3_57689926_-	SINE	Alu	AluJr4
CAediting_288228	chr3_57690515_-	SINE	Alu	AluY
CAediting_288229	chr3_57690560_-	SINE	Alu	AluSz
CAediting_288230	chr3_57690562_-	SINE	Alu	AluSz

Top

RNA A-to-I editing events in the alternative splicing sites for DENND6A

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_288015	chr3_57626451_-	57626447:57626469	3SS	0+2i	CCAAAGTGCTGGGATTACAGGTG	-0.12	CCAAAGTGCTGGGATTACGGGTG	-8.08
IR	CAediting_288016	chr3_57626453_-	57626447:57626469	3SS	0+4i	CCAAAGTGCTGGGATTACAGGTG	-0.12	CCAAAGTGCTGGGATTGCAGGTG	0.68
IR	CAediting_288017	chr3_57626456_-	57626447:57626469	3SS	0+7i	CCAAAGTGCTGGGATTACAGGTG	-0.12	CCAAAGTGCTGGGGTTACAGGTG	1.4
IR	CAediting_288018	chr3_57626465_-	57626447:57626469	3SS	0+16i	CCAAAGTGCTGGGATTACAGGTG	-0.12	CCAAGGTGCTGGGATTACAGGTG	0.37
IR	CAediting_288019	chr3_57626466_-	57626447:57626469	3SS	0+17i	CCAAAGTGCTGGGATTACAGGTG	-0.12	CCAGAGTGCTGGGATTACAGGTG	-0.74
IR	CAediting_288020	chr3_57626467_-	57626447:57626469	3SS	0+18i	CCAAAGTGCTGGGATTACAGGTG	-0.12	CCGAAGTGCTGGGATTACAGGTG	0.05
IR	CAediting_288025	chr3_57626518_-	57626514:57626536	3SS	0+2i	GGTTTCTCCATGTTGGTCAGGCT	2	GGTTTCTCCATGTTGGTCGGGCT	-5.95
IR	CAediting_288043	chr3_57626683_-	57626679:57626701	3SS	0+2i	GTTTTGCTCTTGTTGCCCAGGCT	5.72	GTTTTGCTCTTGTTGCCCGGGCT	-2.23
IR	CAediting_288080	chr3_57627370_-	57627368:57627376	5SS	0+4i	AGGTCGAGA	-9.61	AGGTCGGGA	-13.9
IR	CAediting_288081	chr3_57627376_-	57627368:57627376	5SS	3+0i	AGGTCGAGA	-9.61	GGGTCGAGA	-11.51

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000174839.11.DENND6A.

Correlation between RNA A-to-I editing and PSI for ENSG00000174839.11.DENND6A.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for DENND6A

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for DENND6A

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for DENND6A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for DENND6A

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000311128.8	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_288014	ENST00000311128.8	chr3_57626444_-	-1560.10	-1561.00	-1588.10
CAediting_288015	ENST00000311128.8	chr3_57626451_-	-1560.30	-1561.00	-1588.10
CAediting_288016	ENST00000311128.8	chr3_57626453_-	-1561.00	-1561.00	-1588.10
CAediting_288017	ENST00000311128.8	chr3_57626456_-	-1560.40	-1561.00	-1588.10
CAediting_288018	ENST00000311128.8	chr3_57626465_-	-1560.70	-1561.00	-1588.10
CAediting_288019	ENST00000311128.8	chr3_57626466_-	-1561.10	-1561.00	-1588.10
CAediting_288020	ENST00000311128.8	chr3_57626467_-	-1560.70	-1561.00	-1588.10
CAediting_288021	ENST00000311128.8	chr3_57626493_-	-1560.90	-1561.00	-1588.10
CAediting_288022	ENST00000311128.8	chr3_57626498_-	-1560.40	-1561.00	-1588.10
CAediting_288023	ENST00000311128.8	chr3_57626506_-	-1565.30	-1561.00	-1588.10
CAediting_288024	ENST00000311128.8	chr3_57626507_-	-1562.00	-1561.00	-1588.10
CAediting_288025	ENST00000311128.8	chr3_57626518_-	-1560.30	-1561.00	-1588.10
CAediting_288026	ENST00000311128.8	chr3_57626542_-	-1560.10	-1561.00	-1588.10
CAediting_288027	ENST00000311128.8	chr3_57626544_-	-1560.70	-1561.00	-1588.10
CAediting_288028	ENST00000311128.8	chr3_57626553_-	-1561.00	-1561.00	-1588.10
CAediting_288029	ENST00000311128.8	chr3_57626560_-	-1561.00	-1561.00	-1588.10
CAediting_288030	ENST00000311128.8	chr3_57626561_-	-1561.10	-1561.00	-1588.10
CAediting_288031	ENST00000311128.8	chr3_57626571_-	-1561.00	-1561.00	-1588.10
CAediting_288032	ENST00000311128.8	chr3_57626574_-	-1560.60	-1561.00	-1588.10
CAediting_288033	ENST00000311128.8	chr3_57626585_-	-1560.30	-1561.00	-1588.10
CAediting_288034	ENST00000311128.8	chr3_57626587_-	-1561.00	-1561.00	-1588.10
CAediting_288035	ENST00000311128.8	chr3_57626597_-	-1560.70	-1561.00	-1588.10
CAediting_288036	ENST00000311128.8	chr3_57626600_-	-1560.20	-1561.00	-1588.10
CAediting_288037	ENST00000311128.8	chr3_57626609_-	-1560.30	-1561.00	-1588.10
CAediting_288038	ENST00000311128.8	chr3_57626622_-	-1560.40	-1561.00	-1588.10
CAediting_288039	ENST00000311128.8	chr3_57626626_-	-1560.70	-1561.00	-1588.10
CAediting_288040	ENST00000311128.8	chr3_57626640_-	-1566.40	-1561.00	-1588.10
CAediting_288041	ENST00000311128.8	chr3_57626652_-	-1561.30	-1561.00	-1588.10
CAediting_288042	ENST00000311128.8	chr3_57626663_-	-1561.40	-1561.00	-1588.10
CAediting_288043	ENST00000311128.8	chr3_57626683_-	-1560.20	-1561.00	-1588.10
CAediting_288044	ENST00000311128.8	chr3_57626702_-	-1561.00	-1561.00	-1588.10
CAediting_288045	ENST00000311128.8	chr3_57626708_-	-1560.10	-1561.00	-1588.10
CAediting_288046	ENST00000311128.8	chr3_57627179_-	-1560.30	-1561.00	-1588.10
CAediting_288047	ENST00000311128.8	chr3_57627191_-	-1560.30	-1561.00	-1588.10
CAediting_288048	ENST00000311128.8	chr3_57627204_-	-1566.40	-1561.00	-1588.10
CAediting_288049	ENST00000311128.8	chr3_57627206_-	-1567.70	-1561.00	-1588.10
CAediting_288050	ENST00000311128.8	chr3_57627211_-	-1560.10	-1561.00	-1588.10
CAediting_288051	ENST00000311128.8	chr3_57627227_-	-1560.10	-1561.00	-1588.10
CAediting_288052	ENST00000311128.8	chr3_57627233_-	-1560.10	-1561.00	-1588.10
CAediting_288053	ENST00000311128.8	chr3_57627240_-	-1561.50	-1561.00	-1588.10
CAediting_288054	ENST00000311128.8	chr3_57627241_-	-1563.60	-1561.00	-1588.10
CAediting_288055	ENST00000311128.8	chr3_57627246_-	-1560.60	-1561.00	-1588.10
CAediting_288056	ENST00000311128.8	chr3_57627250_-	-1561.40	-1561.00	-1588.10
CAediting_288057	ENST00000311128.8	chr3_57627252_-	-1562.70	-1561.00	-1588.10
CAediting_288058	ENST00000311128.8	chr3_57627259_-	-1560.10	-1561.00	-1588.10
CAediting_288059	ENST00000311128.8	chr3_57627272_-	-1561.00	-1561.00	-1588.10
CAediting_288060	ENST00000311128.8	chr3_57627276_-	-1560.30	-1561.00	-1588.10
CAediting_288061	ENST00000311128.8	chr3_57627281_-	-1561.00	-1561.00	-1588.10
CAediting_288062	ENST00000311128.8	chr3_57627282_-	-1561.10	-1561.00	-1588.10
CAediting_288063	ENST00000311128.8	chr3_57627292_-	-1560.60	-1561.00	-1588.10
CAediting_288064	ENST00000311128.8	chr3_57627308_-	-1560.70	-1561.00	-1588.10
CAediting_288065	ENST00000311128.8	chr3_57627311_-	-1561.00	-1561.00	-1588.10
CAediting_288066	ENST00000311128.8	chr3_57627312_-	-1561.10	-1561.00	-1588.10
CAediting_288067	ENST00000311128.8	chr3_57627313_-	-1561.10	-1561.00	-1588.10
CAediting_288068	ENST00000311128.8	chr3_57627317_-	-1561.00	-1561.00	-1588.10
CAediting_288069	ENST00000311128.8	chr3_57627319_-	-1561.00	-1561.00	-1588.10
CAediting_288070	ENST00000311128.8	chr3_57627320_-	-1561.10	-1561.00	-1588.10
CAediting_288071	ENST00000311128.8	chr3_57627321_-	-1561.10	-1561.00	-1588.10
CAediting_288072	ENST00000311128.8	chr3_57627322_-	-1561.10	-1561.00	-1588.10
CAediting_288073	ENST00000311128.8	chr3_57627326_-	-1560.70	-1561.00	-1588.10
CAediting_288074	ENST00000311128.8	chr3_57627337_-	-1561.00	-1561.00	-1588.10
CAediting_288075	ENST00000311128.8	chr3_57627338_-	-1561.10	-1561.00	-1588.10
CAediting_288076	ENST00000311128.8	chr3_57627347_-	-1561.00	-1561.00	-1588.10
CAediting_288077	ENST00000311128.8	chr3_57627357_-	-1560.30	-1561.00	-1588.10
CAediting_288078	ENST00000311128.8	chr3_57627360_-	-1560.40	-1561.00	-1588.10
CAediting_288079	ENST00000311128.8	chr3_57627363_-	-1564.90	-1561.00	-1588.10
CAediting_288080	ENST00000311128.8	chr3_57627370_-	-1567.90	-1561.00	-1588.10
CAediting_288081	ENST00000311128.8	chr3_57627376_-	-1561.00	-1561.00	-1588.10
CAediting_288082	ENST00000311128.8	chr3_57627377_-	-1567.40	-1561.00	-1588.10
CAediting_288083	ENST00000311128.8	chr3_57627381_-	-1560.60	-1561.00	-1588.10
CAediting_288084	ENST00000311128.8	chr3_57627386_-	-1567.20	-1561.00	-1588.10
CAediting_288085	ENST00000311128.8	chr3_57627388_-	-1568.20	-1561.00	-1588.10
CAediting_288086	ENST00000311128.8	chr3_57627395_-	-1567.00	-1561.00	-1588.10
CAediting_288087	ENST00000311128.8	chr3_57627400_-	-1560.10	-1561.00	-1588.10
CAediting_288088	ENST00000311128.8	chr3_57627408_-	-1560.60	-1561.00	-1588.10
CAediting_288089	ENST00000311128.8	chr3_57627411_-	-1559.70	-1561.00	-1588.10
CAediting_288090	ENST00000311128.8	chr3_57627416_-	-1561.00	-1561.00	-1588.10
CAediting_288091	ENST00000311128.8	chr3_57627417_-	-1561.10	-1561.00	-1588.10

Top

Relation with ADAR for DENND6A

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_288016	chr3_57626453_-	.	.	.	.	0.0365340021767678	0.237191196004942
LUAD	CAediting_288016	chr3_57626453_-	0.0294371917290313	0.203157327483031	.	.	.	.
STAD	CAediting_288016	chr3_57626453_-	0.000420229172930377	0.28347159481735	.	.	.	.
UCEC	CAediting_288016	chr3_57626453_-	.	.	0.015762975426144	0.237379904035849	0.00591315333124611	0.269470127479006
ESCA	CAediting_288016	chr3_57626453_-	0.0186053982944032	0.223072374368875	.	.	.	.
OV	CAediting_288016	chr3_57626453_-	0.00217657103209146	0.20560248978609	.	.	.	.
BRCA	CAediting_288018	chr3_57626465_-	.	.	.	.	0.0483378960731292	0.126799031382136
STAD	CAediting_288018	chr3_57626465_-	0.00524307047186607	0.221792990586287	.	.	.	.
OV	CAediting_288018	chr3_57626465_-	0.0106939958531575	0.17101691203722	.	.	.	.
STAD	CAediting_288027	chr3_57626544_-	.	.	.	.	0.0496838080273395	0.209886268608805
BRCA	CAediting_288034	chr3_57626587_-	0.00507908135420175	0.209162390459952	.	.	.	.
STAD	CAediting_288034	chr3_57626587_-	0.0105015138626653	0.320259695446242	.	.	.	.
BRCA	CAediting_288048	chr3_57627204_-	0.00277834035823185	0.186226605749939	0.0124991292438549	0.155915297389314	.	.
HNSC	CAediting_288048	chr3_57627204_-	0.00991167168318395	0.254271059432353	.	.	.	.
BRCA	CAediting_288049	chr3_57627206_-	2.87721073038982e-09	0.237860679881021	.	.	.	.
PRAD	CAediting_288049	chr3_57627206_-	0.00679871899163719	0.231067713500766	.	.	.	.
HNSC	CAediting_288049	chr3_57627206_-	0.00714984617525526	0.161574046137731	0.0419492469642986	0.122528204850382	.	.
STAD	CAediting_288049	chr3_57627206_-	0.0012446300564556	0.242824705803641	.	.	.	.
THCA	CAediting_288049	chr3_57627206_-	0.0475204810075229	0.155945402154172	.	.	.	.
OV	CAediting_288049	chr3_57627206_-	0.00973531346415938	0.167969710743739	.	.	.	.
BRCA	CAediting_288064	chr3_57627308_-	.	.	.	.	0.035868783803458	0.13469366883993
ESCA	CAediting_288064	chr3_57627308_-	0.00493597140451546	0.307600663618978	.	.	.	.
BRCA	CAediting_288084	chr3_57627386_-	0.00696402722217918	0.198312118352219	.	.	.	.
STAD	CAediting_288086	chr3_57627395_-	0.000693653993940829	0.30919605588283	.	.	.	.
ESCA	CAediting_288091	chr3_57627417_-	.	.	.	.	0.0199163169625182	0.249231874076802

Top

Relation with cancer stages for DENND6A

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_288048	chr3_57627204_-	0.032796508731148	-0.285712081698187
BRCA	pathologic_stage	CAediting_288019	chr3_57626466_-	0.00337396323722243	0.358392234909857
CESC	clinical_stage	CAediting_288018	chr3_57626465_-	0.00891486976605282	0.355880402519993
CESC	clinical_stage	CAediting_288027	chr3_57626544_-	0.00120000883723129	0.371810724107766
CESC	clinical_stage	CAediting_288091	chr3_57627417_-	0.00957927167632699	0.346392515689351
ESCA	pathologic_stage	CAediting_288018	chr3_57626465_-	0.0197450855118864	-0.229422881420297
HNSC	pathologic_stage	CAediting_288048	chr3_57627204_-	0.00567354303724008	0.289349819797403
KIRC	pathologic_stage	CAediting_288048	chr3_57627204_-	0.024648357958546	0.278553742869453
KIRC	pathologic_stage	CAediting_288049	chr3_57627206_-	0.00628679797793424	0.176284478276669
KIRC	pathologic_stage	CAediting_288086	chr3_57627395_-	0.0457443476276687	0.179759150975797
OV	clinical_stage	CAediting_288034	chr3_57626587_-	0.0396617787204902	0.175360741581168
OV	clinical_stage	CAediting_288049	chr3_57627206_-	0.0486351190628125	0.129050642982328
OV	clinical_stage	CAediting_288086	chr3_57627395_-	0.011419562458111	-0.204022686774535
SKCM	pathologic_stage	CAediting_288048	chr3_57627204_-	0.0117013440359963	0.368655752363317
SKCM	pathologic_stage	CAediting_288091	chr3_57627417_-	0.0401696569429831	0.297283883510572
STAD	pathologic_stage	CAediting_288018	chr3_57626465_-	0.00882769447908084	0.212430509215414
STAD	pathologic_stage	CAediting_288019	chr3_57626466_-	0.0303805131477535	-0.257175434720373
UCEC	clinical_stage	CAediting_288018	chr3_57626465_-	0.0463260975172796	-0.214220508032117
UCEC	clinical_stage	CAediting_288034	chr3_57626587_-	0.041877589551422	-0.268097110112556

Top

Relation with survival for DENND6A

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_288049	chr3_57627206_-	0.0246799809249605	0.00367373	208.68
CESC	CAediting_288027	chr3_57626544_-	0.00856414538011441	0.0177847	1030.17
COAD	CAediting_288049	chr3_57627206_-	1.39227478919146e-05	0.00633659	7.89818e+11
GBM	CAediting_288073	chr3_57627326_-	0.00992133884499768	0.0125953	69.2446
HNSC	CAediting_288090	chr3_57627416_-	0.00185084347592568	0.00113146	5398740
HNSC	CAediting_288091	chr3_57627417_-	0.00561389704781923	0.00774375	387.073
SKCM	CAediting_288048	chr3_57627204_-	0.0360877685494994	0.0109072	22056.2

Top

RelatedDrugs for DENND6A

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for DENND6A

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene