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Editing gene: ZNF584 (CAeditome ID:201514)

Gene summary for ZNF584

Gene summary

Gene information	Gene symbol	ZNF584
	Gene ID	201514
	Gene name	zinc finger protein 584
	Synonyms	-
	Cytomap	19q13.43
	Type of gene	protein-coding
	Description	zinc finger protein 584
	Modification date	20210518
	UniProtAcc	Q8IVC4
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF584

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000171574.16

RNA A-to-I editing events in Cancer.

CAediting_1397698(58402730, +), CAediting_1397699(58402736, +), CAediting_1397700(58403721, +), CAediting_1397701(58403783, +), CAediting_1397702(58403784, +), CAediting_1397703(58403804, +), CAediting_1397704(58403838, +), CAediting_1397705(58403854, +), CAediting_1397706(58403877, +), CAediting_1397707(58403886, +), CAediting_1397708(58403894, +), CAediting_1397709(58403900, +), CAediting_1397710(58403931, +), CAediting_1397711(58403983, +), CAediting_1397712(58411298, +), CAediting_1397713(58411379, +), CAediting_1397714(58411383, +), CAediting_1397715(58416968, +), CAediting_1397716(58416985, +), CAediting_1397717(58416988, +), CAediting_1397718(58416998, +), CAediting_1397719(58417025, +), CAediting_1397720(58417066, +), CAediting_1397721(58417067, +), CAediting_1397722(58417167, +), CAediting_1397723(58417180, +), CAediting_1397724(58417188, +), CAediting_1397725(58417200, +), CAediting_1397726(58417201, +), CAediting_1397727(58417327, +), CAediting_1397728(58417350, +), CAediting_1397729(58417387, +), CAediting_1397730(58417388, +), CAediting_1397731(58417403, +), CAediting_1397732(58417404, +), CAediting_1397733(58417587, +), CAediting_1397734(58417636, +), CAediting_1397735(58417667, +), CAediting_1397736(58417684, +), CAediting_1397737(58417714, +),

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RNA editing positional annotations for ZNF584 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1397716	chr19_58416985_+	nonsynonymous SNV	ENST00000306910.7	c.A467G	p.E156G	D	B	D
CAediting_1397716	chr19_58416985_+	nonsynonymous SNV	ENST00000593920.4	c.A332G	p.E111G	D	B	D
CAediting_1397723	chr19_58417180_+	nonsynonymous SNV	ENST00000306910.7	c.A662G	p.K221R	T	B	D
CAediting_1397723	chr19_58417180_+	nonsynonymous SNV	ENST00000593920.4	c.A527G	p.K176R	T	B	D
CAediting_1397726	chr19_58417201_+	nonsynonymous SNV	ENST00000306910.7	c.A683G	p.K228R	T	D	N
CAediting_1397726	chr19_58417201_+	nonsynonymous SNV	ENST00000593920.4	c.A548G	p.K183R	T	D	N
CAediting_1397727	chr19_58417327_+	nonsynonymous SNV	ENST00000306910.7	c.A809G	p.Y270C	D	D	D
CAediting_1397727	chr19_58417327_+	nonsynonymous SNV	ENST00000593920.4	c.A674G	p.Y225C	D	D	D
CAediting_1397732	chr19_58417404_+	nonsynonymous SNV	ENST00000306910.7	c.A886G	p.R296G	D	D	D
CAediting_1397732	chr19_58417404_+	nonsynonymous SNV	ENST00000593920.4	c.A751G	p.R251G	D	D	D
CAediting_1397734	chr19_58417636_+	nonsynonymous SNV	ENST00000306910.7	c.A1118G	p.Q373R	T	B	D
CAediting_1397734	chr19_58417636_+	nonsynonymous SNV	ENST00000593920.4	c.A983G	p.Q328R	T	B	D

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1397698	chr19_58402730_+	ncRNA_intronic
CAediting_1397699	chr19_58402736_+	ncRNA_intronic
CAediting_1397700	chr19_58403721_+	ncRNA_intronic
CAediting_1397701	chr19_58403783_+	ncRNA_intronic
CAediting_1397702	chr19_58403784_+	ncRNA_intronic
CAediting_1397703	chr19_58403804_+	ncRNA_intronic
CAediting_1397704	chr19_58403838_+	ncRNA_intronic
CAediting_1397705	chr19_58403854_+	ncRNA_intronic
CAediting_1397706	chr19_58403877_+	ncRNA_intronic
CAediting_1397707	chr19_58403886_+	ncRNA_intronic
CAediting_1397708	chr19_58403894_+	ncRNA_intronic
CAediting_1397709	chr19_58403900_+	ncRNA_intronic
CAediting_1397710	chr19_58403931_+	ncRNA_intronic
CAediting_1397711	chr19_58403983_+	ncRNA_intronic
CAediting_1397712	chr19_58411298_+	ncRNA_intronic
CAediting_1397713	chr19_58411379_+	ncRNA_intronic
CAediting_1397714	chr19_58411383_+	ncRNA_intronic
CAediting_1397715	chr19_58416968_+	exonic
CAediting_1397716	chr19_58416985_+	exonic
CAediting_1397717	chr19_58416988_+	exonic
CAediting_1397718	chr19_58416998_+	exonic
CAediting_1397719	chr19_58417025_+	exonic
CAediting_1397720	chr19_58417066_+	exonic
CAediting_1397721	chr19_58417067_+	exonic
CAediting_1397722	chr19_58417167_+	exonic
CAediting_1397723	chr19_58417180_+	exonic
CAediting_1397724	chr19_58417188_+	exonic
CAediting_1397725	chr19_58417200_+	exonic
CAediting_1397726	chr19_58417201_+	exonic
CAediting_1397727	chr19_58417327_+	exonic
CAediting_1397728	chr19_58417350_+	exonic
CAediting_1397729	chr19_58417387_+	exonic
CAediting_1397730	chr19_58417388_+	exonic
CAediting_1397731	chr19_58417403_+	exonic
CAediting_1397732	chr19_58417404_+	exonic
CAediting_1397733	chr19_58417587_+	exonic
CAediting_1397734	chr19_58417636_+	exonic
CAediting_1397735	chr19_58417667_+	exonic
CAediting_1397736	chr19_58417684_+	exonic
CAediting_1397737	chr19_58417714_+	exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1397698	chr19_58402730_+	SINE	Alu	AluSp
CAediting_1397699	chr19_58402736_+	SINE	Alu	AluSp
CAediting_1397700	chr19_58403721_+	SINE	Alu	AluSc8
CAediting_1397701	chr19_58403783_+	SINE	Alu	AluSc8
CAediting_1397702	chr19_58403784_+	SINE	Alu	AluSc8
CAediting_1397703	chr19_58403804_+	SINE	Alu	AluSc8
CAediting_1397704	chr19_58403838_+	SINE	Alu	AluSc8
CAediting_1397705	chr19_58403854_+	SINE	Alu	AluSc8
CAediting_1397706	chr19_58403877_+	SINE	Alu	AluSc8
CAediting_1397707	chr19_58403886_+	SINE	Alu	AluSc8
CAediting_1397708	chr19_58403894_+	SINE	Alu	AluSc8
CAediting_1397709	chr19_58403900_+	SINE	Alu	AluSc8
CAediting_1397710	chr19_58403931_+	SINE	Alu	AluSc8
CAediting_1397711	chr19_58403983_+	SINE	Alu	AluSc8
CAediting_1397712	chr19_58411298_+	SINE	Alu	AluSq2
CAediting_1397713	chr19_58411379_+	SINE	Alu	AluSq2
CAediting_1397714	chr19_58411383_+	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for ZNF584

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1397727	chr19_58417327_+	58417319:58417327	5SS	0+6i	AAGGCCTTA	-7.71	AAGGCCTTG	-7.52

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000171574.16.ZNF584.

Correlation between RNA A-to-I editing and PSI for ENSG00000171574.16.ZNF584.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF584

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF584

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF584

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4722-3p	58416978	58416984	7mer-m8	58416962	58416985	145.00	-17.02
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6727-3p	58416978	58416984	7mer-m8	58416966	58416985	147.00	-17.25
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6752-3p	58416979	58416986	8mer-1a	58416965	58416986	147.00	-19.08
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000322834	hsa-miR-4722-3p	58416978	58416984	7mer-m8	58416962	58416985	145.00	-17.02
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6727-3p	58416978	58416984	7mer-m8	58416966	58416985	147.00	-17.25
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6752-3p	58416979	58416986	8mer-1a	58416965	58416986	147.00	-19.08
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000599238	hsa-miR-3183	58416982	58416988	7mer-m8	58416968	58416989	140.00	-24.47
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4723-3p	58416982	58416988	7mer-m8	58416968	58416989	151.00	-15.59
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6769b-3p	58416982	58416988	7mer-m8	58416969	58416989	158.00	-19.41
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6781-3p	58416984	58416989	6mer	58416967	58416990	150.00	-22.02
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6817-3p	58416981	58416987	7mer-m8	58416971	58416988	159.00	-22.73
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6819-3p	58416984	58416990	7mer-m8	58416970	58416991	150.00	-16.80
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6877-3p	58416984	58416990	7mer-m8	58416968	58416991	157.00	-24.92
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000322834	hsa-miR-3183	58416982	58416988	7mer-m8	58416968	58416989	140.00	-24.47
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000322834	hsa-miR-4723-3p	58416982	58416988	7mer-m8	58416968	58416989	151.00	-15.59
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6769b-3p	58416982	58416988	7mer-m8	58416969	58416989	158.00	-19.41
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6781-3p	58416984	58416989	6mer	58416967	58416990	150.00	-22.02
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6817-3p	58416981	58416987	7mer-m8	58416971	58416988	159.00	-22.73
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6819-3p	58416984	58416990	7mer-m8	58416970	58416991	150.00	-16.80
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6877-3p	58416984	58416990	7mer-m8	58416968	58416991	157.00	-24.92
CAediting_1397718	chr19_58416998_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4325	58416995	58417001	7mer-m8	58416986	58417002	146.00	-18.60
CAediting_1397718	chr19_58416998_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4793-3p	58416996	58417002	7mer-m8	58416983	58417003	155.00	-19.17
CAediting_1397718	chr19_58416998_+	ENSG00000171574.16	ENST00000322834	hsa-miR-4325	58416995	58417001	7mer-m8	58416986	58417002	146.00	-18.60
CAediting_1397718	chr19_58416998_+	ENSG00000171574.16	ENST00000322834	hsa-miR-4793-3p	58416996	58417002	7mer-m8	58416983	58417003	155.00	-19.17
CAediting_1397721	chr19_58417067_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4279	58417064	58417070	7mer-m8	58417056	58417071	140.00	-15.52
CAediting_1397721	chr19_58417067_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6845-3p	58417065	58417072	8mer-1a	58417052	58417072	152.00	-18.36
CAediting_1397721	chr19_58417067_+	ENSG00000171574.16	ENST00000322834	hsa-miR-4279	58417064	58417070	7mer-m8	58417056	58417071	140.00	-15.52
CAediting_1397721	chr19_58417067_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6845-3p	58417065	58417072	8mer-1a	58417052	58417072	152.00	-18.36
CAediting_1397722	chr19_58417167_+	ENSG00000171574.16	ENST00000599238	hsa-miR-377-3p	58417161	58417167	7mer-m8	58417145	58417168	151.00	-15.70
CAediting_1397723	chr19_58417180_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4290	58417176	58417182	7mer-m8	58417165	58417183	151.00	-16.19
CAediting_1397723	chr19_58417180_+	ENSG00000171574.16	ENST00000599238	hsa-miR-532-3p	58417173	58417179	7mer-m8	58417159	58417180	149.00	-22.67
CAediting_1397725	chr19_58417200_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6854-5p	58417197	58417203	7mer-m8	58417182	58417204	154.00	-19.61
CAediting_1397726	chr19_58417201_+	ENSG00000171574.16	ENST00000599238	hsa-miR-3135a	58417197	58417202	6mer	58417181	58417203	147.00	-19.92
CAediting_1397729	chr19_58417387_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4639-3p	58417384	58417390	7mer-m8	58417373	58417391	146.00	-14.62
CAediting_1397730	chr19_58417388_+	ENSG00000171574.16	ENST00000599238	hsa-miR-500a-3p	58417386	58417392	7mer-m8	58417372	58417393	140.00	-15.61
CAediting_1397731	chr19_58417403_+	ENSG00000171574.16	ENST00000599238	hsa-miR-3183	58417399	58417405	7mer-m8	58417383	58417406	156.00	-25.14
CAediting_1397731	chr19_58417403_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4723-3p	58417399	58417405	7mer-m8	58417385	58417406	140.00	-13.11
CAediting_1397731	chr19_58417403_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4757-5p	58417401	58417407	7mer-m8	58417383	58417408	148.00	-18.86
CAediting_1397731	chr19_58417403_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6744-3p	58417401	58417407	7mer-m8	58417388	58417408	154.00	-27.87
CAediting_1397731	chr19_58417403_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6769b-3p	58417399	58417405	7mer-m8	58417386	58417406	140.00	-13.94
CAediting_1397731	chr19_58417403_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6781-3p	58417401	58417406	6mer	58417384	58417407	141.00	-18.22
CAediting_1397731	chr19_58417403_+	ENSG00000171574.16	ENST00000599238	hsa-miR-7110-3p	58417398	58417404	7mer-m8	58417378	58417405	150.00	-24.05
CAediting_1397732	chr19_58417404_+	ENSG00000171574.16	ENST00000599238	hsa-miR-1248	58417399	58417404	6mer	58417379	58417405	151.00	-17.53
CAediting_1397732	chr19_58417404_+	ENSG00000171574.16	ENST00000599238	hsa-miR-320a-5p	58417398	58417404	7mer-m8	58417384	58417405	144.00	-14.84
CAediting_1397732	chr19_58417404_+	ENSG00000171574.16	ENST00000599238	hsa-miR-5088-3p	58417399	58417405	7mer-m8	58417385	58417406	158.00	-18.19
CAediting_1397732	chr19_58417404_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6851-3p	58417401	58417407	7mer-m8	58417388	58417408	141.00	-19.37
CAediting_1397732	chr19_58417404_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6886-3p	58417400	58417406	7mer-m8	58417388	58417407	153.00	-18.81
CAediting_1397733	chr19_58417587_+	ENSG00000171574.16	ENST00000599238	hsa-miR-15a-3p	58417585	58417590	6mer	58417569	58417591	146.00	-24.77
CAediting_1397733	chr19_58417587_+	ENSG00000171574.16	ENST00000599238	hsa-miR-1972	58417585	58417591	7mer-m8	58417570	58417592	149.00	-21.74
CAediting_1397733	chr19_58417587_+	ENSG00000171574.16	ENST00000599238	hsa-miR-1972	58417585	58417591	7mer-m8	58417570	58417592	149.00	-21.74
CAediting_1397733	chr19_58417587_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4717-5p	58417584	58417590	7mer-m8	58417570	58417591	149.00	-18.82
CAediting_1397734	chr19_58417636_+	ENSG00000171574.16	ENST00000599238	hsa-miR-1250-5p	58417630	58417635	6mer	58417616	58417636	148.00	-27.07
CAediting_1397736	chr19_58417684_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4290	58417680	58417686	7mer-m8	58417669	58417687	147.00	-17.36
CAediting_1397736	chr19_58417684_+	ENSG00000171574.16	ENST00000599238	hsa-miR-532-3p	58417677	58417683	7mer-m8	58417663	58417684	152.00	-23.45
CAediting_1397715	chr19_58416968_+	ENSG00000171574.16	ENST00000599238	hsa-miR-3074-5p	58416964	58416970	7mer-m8	58416951	58416971	150.00	-19.76
CAediting_1397715	chr19_58416968_+	ENSG00000171574.16	ENST00000599238	hsa-miR-370-3p	58416962	58416969	8mer-1a	58416947	58416969	147.00	-22.91
CAediting_1397715	chr19_58416968_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6893-3p	58416962	58416969	8mer-1a	58416945	58416969	153.00	-19.61
CAediting_1397715	chr19_58416968_+	ENSG00000171574.16	ENST00000322834	hsa-miR-3074-5p	58416964	58416970	7mer-m8	58416951	58416971	150.00	-19.76
CAediting_1397715	chr19_58416968_+	ENSG00000171574.16	ENST00000322834	hsa-miR-370-3p	58416962	58416969	8mer-1a	58416947	58416969	147.00	-22.91
CAediting_1397715	chr19_58416968_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6893-3p	58416962	58416969	8mer-1a	58416945	58416969	153.00	-19.61
CAediting_1397727	chr19_58417327_+	ENSG00000171574.16	ENST00000599238	hsa-miR-3922-5p	58417320	58417326	7mer-m8	58417305	58417327	140.00	-16.89
CAediting_1397727	chr19_58417327_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4708-3p	58417321	58417327	7mer-m8	58417310	58417328	147.00	-16.54

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1397723	chr19_58417180_+	ENSG00000171574.16	ENST00000599238	hsa-miR-1245b-5p	58417178	58417184	7mer-m8	58417166	58417185	149	-15.45
CAediting_1397736	chr19_58417684_+	ENSG00000171574.16	ENST00000599238	hsa-miR-1245b-5p	58417682	58417688	7mer-m8	58417670	58417689	152	-18.79
CAediting_1397734	chr19_58417636_+	ENSG00000171574.16	ENST00000599238	hsa-miR-138-5p	58417631	58417638	8mer-1a	58417616	58417638	147	-21.08
CAediting_1397734	chr19_58417636_+	ENSG00000171574.16	ENST00000599238	hsa-miR-138-5p	58417631	58417638	8mer-1a	58417616	58417638	147	-21.08
CAediting_1397735	chr19_58417667_+	ENSG00000171574.16	ENST00000599238	hsa-miR-181a-5p	58417663	58417670	8mer-1a	58417647	58417670	143	-10.89
CAediting_1397735	chr19_58417667_+	ENSG00000171574.16	ENST00000599238	hsa-miR-181a-5p	58417663	58417670	8mer-1a	58417647	58417670	143	-10.89
CAediting_1397735	chr19_58417667_+	ENSG00000171574.16	ENST00000599238	hsa-miR-181b-5p	58417663	58417670	8mer-1a	58417648	58417670	145	-10.8
CAediting_1397735	chr19_58417667_+	ENSG00000171574.16	ENST00000599238	hsa-miR-181b-5p	58417663	58417670	8mer-1a	58417648	58417670	145	-10.8
CAediting_1397735	chr19_58417667_+	ENSG00000171574.16	ENST00000599238	hsa-miR-181c-5p	58417663	58417670	8mer-1a	58417645	58417670	146	-18.2
CAediting_1397735	chr19_58417667_+	ENSG00000171574.16	ENST00000599238	hsa-miR-181d-5p	58417663	58417670	8mer-1a	58417642	58417670	147	-18.03
CAediting_1397733	chr19_58417587_+	ENSG00000171574.16	ENST00000599238	hsa-miR-221-3p	58417582	58417588	7mer-m8	58417567	58417589	145	-15.07
CAediting_1397733	chr19_58417587_+	ENSG00000171574.16	ENST00000599238	hsa-miR-222-3p	58417582	58417588	7mer-m8	58417569	58417589	140	-14.2
CAediting_1397728	chr19_58417350_+	ENSG00000171574.16	ENST00000599238	hsa-miR-2681-5p	58417343	58417349	7mer-m8	58417329	58417350	152	-14.23
CAediting_1397719	chr19_58417025_+	ENSG00000171574.16	ENST00000599238	hsa-miR-3658	58417019	58417026	8mer-1a	58417002	58417026	149	-15.86
CAediting_1397722	chr19_58417167_+	ENSG00000171574.16	ENST00000599238	hsa-miR-3941	58417160	58417167	8mer-1a	58417146	58417167	145	-15.55
CAediting_1397735	chr19_58417667_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4262	58417663	58417670	8mer-1a	58417654	58417670	151	-13.5
CAediting_1397723	chr19_58417180_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4297	58417176	58417182	7mer-m8	58417168	58417183	145	-13.01
CAediting_1397736	chr19_58417684_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4297	58417680	58417686	7mer-m8	58417669	58417687	145	-18.76
CAediting_1397730	chr19_58417388_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4325	58417386	58417392	7mer-m8	58417378	58417393	144	-13.2
CAediting_1397729	chr19_58417387_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4664-3p	58417380	58417387	8mer-1a	58417363	58417387	149	-18.47
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000599238	hsa-miR-4727-5p	58416978	58416984	7mer-m8	58416966	58416985	142	-14.3
CAediting_1397734	chr19_58417636_+	ENSG00000171574.16	ENST00000599238	hsa-miR-548q	58417630	58417636	7mer-m8	58417616	58417637	140	-23.87
CAediting_1397723	chr19_58417180_+	ENSG00000171574.16	ENST00000599238	hsa-miR-5581-5p	58417176	58417182	7mer-m8	58417162	58417183	141	-12.91
CAediting_1397736	chr19_58417684_+	ENSG00000171574.16	ENST00000599238	hsa-miR-5581-5p	58417680	58417686	7mer-m8	58417666	58417687	140	-13.79
CAediting_1397724	chr19_58417188_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6126	58417181	58417187	7mer-m8	58417171	58417188	145	-15.36
CAediting_1397720	chr19_58417066_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6515-3p	58417063	58417070	8mer-1a	58417051	58417070	140	-10.36
CAediting_1397721	chr19_58417067_+	ENSG00000171574.16	ENST00000599238	hsa-miR-6515-3p	58417063	58417070	8mer-1a	58417051	58417070	140	-10.36
CAediting_1397719	chr19_58417025_+	ENSG00000171574.16	ENST00000599238	hsa-miR-7856-5p	58417021	58417026	6mer	58417007	58417027	145	-15.44
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000599238	hsa-miR-942-5p	58416982	58416988	7mer-m8	58416966	58416989	150	-18.42
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000599238	hsa-miR-942-5p	58416982	58416988	7mer-m8	58416966	58416989	150	-18.42
CAediting_1397719	chr19_58417025_+	ENSG00000171574.16	ENST00000322834	hsa-miR-3658	58417019	58417026	8mer-1a	58417002	58417026	149	-15.86
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000322834	hsa-miR-4727-5p	58416978	58416984	7mer-m8	58416966	58416985	142	-14.3
CAediting_1397720	chr19_58417066_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6515-3p	58417063	58417070	8mer-1a	58417051	58417070	140	-10.36
CAediting_1397721	chr19_58417067_+	ENSG00000171574.16	ENST00000322834	hsa-miR-6515-3p	58417063	58417070	8mer-1a	58417051	58417070	140	-10.36
CAediting_1397719	chr19_58417025_+	ENSG00000171574.16	ENST00000322834	hsa-miR-7856-5p	58417021	58417026	6mer	58417007	58417027	145	-15.44
CAediting_1397716	chr19_58416985_+	ENSG00000171574.16	ENST00000322834	hsa-miR-942-5p	58416982	58416988	7mer-m8	58416966	58416989	150	-18.42
CAediting_1397717	chr19_58416988_+	ENSG00000171574.16	ENST00000322834	hsa-miR-942-5p	58416982	58416988	7mer-m8	58416966	58416989	150	-18.42

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000171574.16	ENST00000599238	hsa-miR-605-3p	58417033	58417039	7mer-m8	58417021	58417040	145	-14.45
CAediting_748296	chr10_51299626_+	ENSG00000171574.16	ENST00000322834	hsa-miR-605-3p	58417033	58417039	7mer-m8	58417021	58417040	145	-14.45
CAediting_524911	chr7_5495852_-	ENSG00000171574.16	ENST00000306910	hsa-miR-589-3p	58418277	58418283	7mer-m8	58418258	58418284	149	-20.66
CAediting_524911	chr7_5495852_-	ENSG00000171574.16	ENST00000593920	hsa-miR-589-3p	58418277	58418283	7mer-m8	58418258	58418284	149	-20.66
CAediting_86358	chr1_109598906_+	ENSG00000171574.16	ENST00000599238	hsa-miR-197-5p	58417700	58417706	7mer-m8	58417685	58417707	141	-22.9
CAediting_524911	chr7_5495852_-	ENSG00000171574.16	ENST00000599238	hsa-miR-589-3p	58418277	58418283	7mer-m8	58418258	58418284	149	-20.66

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_524911	chr7_5495852_-	ENSG00000171574.16	ENST00000599238	hsa-miR-589-3p	58417357	58417363	7mer-m8	58417342	58417364	152	-17.16

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF584

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF584

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ZNF584

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZNF584

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF584

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF584

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene