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Editing gene: NBPF11 (CAeditome ID:200030)

Gene summary for NBPF11

Gene summary

Gene information	Gene symbol	NBPF11
	Gene ID	200030
	Gene name	NBPF member 11
	Synonyms	NBPF24
	Cytomap	1q21.2
	Type of gene	protein-coding
	Description	neuroblastoma breakpoint family member 11neuroblastoma breakpoint family, member 24
	Modification date	20210518
	UniProtAcc	Q86T75
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for NBPF11

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000263956.4

RNA A-to-I editing events in Cancer.

CAediting_93255(148102590, -), CAediting_93256(148102644, -), CAediting_93257(148102645, -), CAediting_93258(148102733, -), CAediting_93259(148102734, -), CAediting_93260(148102797, -), CAediting_93261(148102803, -), CAediting_93262(148102827, -), CAediting_93263(148102851, -), CAediting_93264(148102873, -),

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RNA editing positional annotations for NBPF11 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_93255	chr1_148102590_-	UTR3
CAediting_93256	chr1_148102644_-	UTR3
CAediting_93257	chr1_148102645_-	UTR3
CAediting_93258	chr1_148102733_-	UTR3
CAediting_93259	chr1_148102734_-	UTR3
CAediting_93260	chr1_148102797_-	UTR3
CAediting_93261	chr1_148102803_-	UTR3
CAediting_93262	chr1_148102827_-	UTR3
CAediting_93263	chr1_148102851_-	UTR3
CAediting_93264	chr1_148102873_-	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_93255	chr1_148102590_-	LINE	L1	L1MC4
CAediting_93256	chr1_148102644_-	LINE	L1	L1MC4
CAediting_93257	chr1_148102645_-	LINE	L1	L1MC4
CAediting_93258	chr1_148102733_-	LINE	L1	L1MC4
CAediting_93259	chr1_148102734_-	LINE	L1	L1MC4
CAediting_93260	chr1_148102797_-	LINE	L1	L1MC4
CAediting_93261	chr1_148102803_-	LINE	L1	L1MC4
CAediting_93262	chr1_148102827_-	LINE	L1	L1MC4
CAediting_93263	chr1_148102851_-	LINE	L1	L1MC4
CAediting_93264	chr1_148102873_-	LINE	L1	L1MC4

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RNA A-to-I editing events in the alternative splicing sites for NBPF11

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000263956.4.NBPF11.

Correlation between RNA A-to-I editing and PSI for ENSG00000263956.4.NBPF11.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NBPF11

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

SARC.CAediting_93256.ENSG00000263956.NBPF11.png
Soverview

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Protein coding region RNA A-to-I editings for NBPF11

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NBPF11

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614785	hsa-miR-645	148102589	148102596	8mer-1a	148102589	148102607	146.00	-17.18
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614785	hsa-miR-8078	148102588	148102594	7mer-m8	148102587	148102609	146.00	-16.33
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614015	hsa-miR-645	148102589	148102596	8mer-1a	148102589	148102607	146.00	-17.18
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614015	hsa-miR-8078	148102588	148102594	7mer-m8	148102587	148102609	146.00	-16.33
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614506	hsa-miR-645	148102589	148102596	8mer-1a	148102589	148102607	146.00	-17.18
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614506	hsa-miR-8078	148102588	148102594	7mer-m8	148102587	148102609	146.00	-16.33
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000615281	hsa-miR-645	148102589	148102596	8mer-1a	148102589	148102607	146.00	-17.18
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000615281	hsa-miR-8078	148102588	148102594	7mer-m8	148102587	148102609	146.00	-16.33
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614785	hsa-miR-1199-5p	148102644	148102650	7mer-m8	148102643	148102661	150.00	-18.91
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614785	hsa-miR-181b-2-3p	148102641	148102647	7mer-m8	148102640	148102658	145.00	-11.96
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614785	hsa-miR-181b-3p	148102641	148102647	7mer-m8	148102640	148102659	149.00	-11.79
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614785	hsa-miR-4420	148102641	148102647	7mer-m8	148102640	148102661	161.00	-25.99
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614785	hsa-miR-6751-3p	148102644	148102650	7mer-m8	148102643	148102663	140.00	-18.55
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614015	hsa-miR-1199-5p	148102644	148102650	7mer-m8	148102643	148102661	150.00	-18.91
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614015	hsa-miR-181b-2-3p	148102641	148102647	7mer-m8	148102640	148102658	145.00	-11.96
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614015	hsa-miR-181b-3p	148102641	148102647	7mer-m8	148102640	148102659	149.00	-11.79
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614015	hsa-miR-4420	148102641	148102647	7mer-m8	148102640	148102661	161.00	-25.99
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614015	hsa-miR-6751-3p	148102644	148102650	7mer-m8	148102643	148102663	140.00	-18.55
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614506	hsa-miR-1199-5p	148102644	148102650	7mer-m8	148102643	148102661	150.00	-18.91
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614506	hsa-miR-181b-2-3p	148102641	148102647	7mer-m8	148102640	148102658	145.00	-11.96
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614506	hsa-miR-181b-3p	148102641	148102647	7mer-m8	148102640	148102659	149.00	-11.79
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614506	hsa-miR-4420	148102641	148102647	7mer-m8	148102640	148102661	161.00	-25.99
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000614506	hsa-miR-6751-3p	148102644	148102650	7mer-m8	148102643	148102663	140.00	-18.55
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000615281	hsa-miR-1199-5p	148102644	148102650	7mer-m8	148102643	148102661	150.00	-18.91
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000615281	hsa-miR-181b-2-3p	148102641	148102647	7mer-m8	148102640	148102658	145.00	-11.96
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000615281	hsa-miR-181b-3p	148102641	148102647	7mer-m8	148102640	148102659	149.00	-11.79
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000615281	hsa-miR-4420	148102641	148102647	7mer-m8	148102640	148102661	161.00	-25.99
CAediting_93256	chr1_148102644_-	ENSG00000263956.4	ENST00000615281	hsa-miR-6751-3p	148102644	148102650	7mer-m8	148102643	148102663	140.00	-18.55
CAediting_93257	chr1_148102645_-	ENSG00000263956.4	ENST00000614785	hsa-miR-136-3p	148102640	148102646	7mer-m8	148102639	148102659	150.00	-13.15
CAediting_93257	chr1_148102645_-	ENSG00000263956.4	ENST00000614015	hsa-miR-136-3p	148102640	148102646	7mer-m8	148102639	148102659	150.00	-13.15
CAediting_93257	chr1_148102645_-	ENSG00000263956.4	ENST00000614506	hsa-miR-136-3p	148102640	148102646	7mer-m8	148102639	148102659	150.00	-13.15
CAediting_93257	chr1_148102645_-	ENSG00000263956.4	ENST00000615281	hsa-miR-136-3p	148102640	148102646	7mer-m8	148102639	148102659	150.00	-13.15
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614785	hsa-miR-371b-5p	148102733	148102739	7mer-m8	148102732	148102754	143.00	-8.02
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614785	hsa-miR-373-5p	148102733	148102739	7mer-m8	148102732	148102753	147.00	-11.14
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614785	hsa-miR-4283	148102728	148102735	8mer-1a	148102728	148102744	146.00	-19.88
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614785	hsa-miR-4283	148102728	148102735	8mer-1a	148102728	148102744	146.00	-19.88
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614785	hsa-miR-4437	148102730	148102736	7mer-m8	148102729	148102750	162.00	-21.38
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614785	hsa-miR-616-5p	148102733	148102739	7mer-m8	148102732	148102753	143.00	-8.54
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614015	hsa-miR-371b-5p	148102733	148102739	7mer-m8	148102732	148102754	143.00	-8.02
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614015	hsa-miR-373-5p	148102733	148102739	7mer-m8	148102732	148102753	147.00	-11.14
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614015	hsa-miR-4283	148102728	148102735	8mer-1a	148102728	148102744	146.00	-19.88
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614015	hsa-miR-4283	148102728	148102735	8mer-1a	148102728	148102744	146.00	-19.88
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614015	hsa-miR-4437	148102730	148102736	7mer-m8	148102729	148102750	162.00	-21.38
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614015	hsa-miR-616-5p	148102733	148102739	7mer-m8	148102732	148102753	143.00	-8.54
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614506	hsa-miR-371b-5p	148102733	148102739	7mer-m8	148102732	148102754	143.00	-8.02
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614506	hsa-miR-373-5p	148102733	148102739	7mer-m8	148102732	148102753	147.00	-11.14
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614506	hsa-miR-4283	148102728	148102735	8mer-1a	148102728	148102744	146.00	-19.88
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614506	hsa-miR-4283	148102728	148102735	8mer-1a	148102728	148102744	146.00	-19.88
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614506	hsa-miR-4437	148102730	148102736	7mer-m8	148102729	148102750	162.00	-21.38
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614506	hsa-miR-616-5p	148102733	148102739	7mer-m8	148102732	148102753	143.00	-8.54
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000615281	hsa-miR-371b-5p	148102733	148102739	7mer-m8	148102732	148102754	143.00	-8.02
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000615281	hsa-miR-373-5p	148102733	148102739	7mer-m8	148102732	148102753	147.00	-11.14
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000615281	hsa-miR-4283	148102728	148102735	8mer-1a	148102728	148102744	146.00	-19.88
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000615281	hsa-miR-4283	148102728	148102735	8mer-1a	148102728	148102744	146.00	-19.88
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000615281	hsa-miR-4437	148102730	148102736	7mer-m8	148102729	148102750	162.00	-21.38
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000615281	hsa-miR-616-5p	148102733	148102739	7mer-m8	148102732	148102753	143.00	-8.54
CAediting_93259	chr1_148102734_-	ENSG00000263956.4	ENST00000614785	hsa-miR-615-5p	148102728	148102735	8mer-1a	148102728	148102749	144.00	-19.42
CAediting_93259	chr1_148102734_-	ENSG00000263956.4	ENST00000614015	hsa-miR-615-5p	148102728	148102735	8mer-1a	148102728	148102749	144.00	-19.42
CAediting_93259	chr1_148102734_-	ENSG00000263956.4	ENST00000614506	hsa-miR-615-5p	148102728	148102735	8mer-1a	148102728	148102749	144.00	-19.42
CAediting_93259	chr1_148102734_-	ENSG00000263956.4	ENST00000615281	hsa-miR-615-5p	148102728	148102735	8mer-1a	148102728	148102749	144.00	-19.42
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614785	hsa-miR-6845-3p	148102797	148102803	7mer-m8	148102796	148102816	146.00	-19.78
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614785	hsa-miR-7111-3p	148102795	148102801	7mer-m8	148102794	148102815	146.00	-14.36
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614015	hsa-miR-6845-3p	148102797	148102803	7mer-m8	148102796	148102816	146.00	-19.78
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614015	hsa-miR-7111-3p	148102795	148102801	7mer-m8	148102794	148102815	146.00	-14.36
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614506	hsa-miR-6845-3p	148102797	148102803	7mer-m8	148102796	148102816	146.00	-19.78
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614506	hsa-miR-7111-3p	148102795	148102801	7mer-m8	148102794	148102815	146.00	-14.36
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000615281	hsa-miR-6845-3p	148102797	148102803	7mer-m8	148102796	148102816	146.00	-19.78
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000615281	hsa-miR-7111-3p	148102795	148102801	7mer-m8	148102794	148102815	146.00	-14.36
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614785	hsa-miR-204-5p	148102800	148102806	7mer-m8	148102799	148102821	141.00	-11.65
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614785	hsa-miR-211-5p	148102800	148102806	7mer-m8	148102799	148102821	141.00	-11.65
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614785	hsa-miR-4287	148102798	148102805	8mer-1a	148102798	148102816	140.00	-14.47
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614785	hsa-miR-4685-3p	148102798	148102805	8mer-1a	148102798	148102819	140.00	-15.67
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614785	hsa-miR-6832-3p	148102800	148102807	8mer-1a	148102800	148102819	143.00	-8.39
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614785	hsa-miR-6867-3p	148102797	148102804	8mer-1a	148102797	148102817	147.00	-11.27
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614015	hsa-miR-204-5p	148102800	148102806	7mer-m8	148102799	148102821	141.00	-11.65
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614015	hsa-miR-211-5p	148102800	148102806	7mer-m8	148102799	148102821	141.00	-11.65
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614015	hsa-miR-4287	148102798	148102805	8mer-1a	148102798	148102816	140.00	-14.47
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614015	hsa-miR-4685-3p	148102798	148102805	8mer-1a	148102798	148102819	140.00	-15.67
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614015	hsa-miR-6832-3p	148102800	148102807	8mer-1a	148102800	148102819	143.00	-8.39
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614015	hsa-miR-6867-3p	148102797	148102804	8mer-1a	148102797	148102817	147.00	-11.27
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614506	hsa-miR-204-5p	148102800	148102806	7mer-m8	148102799	148102821	141.00	-11.65
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614506	hsa-miR-211-5p	148102800	148102806	7mer-m8	148102799	148102821	141.00	-11.65
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614506	hsa-miR-4287	148102798	148102805	8mer-1a	148102798	148102816	140.00	-14.47
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614506	hsa-miR-4685-3p	148102798	148102805	8mer-1a	148102798	148102819	140.00	-15.67
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614506	hsa-miR-6832-3p	148102800	148102807	8mer-1a	148102800	148102819	143.00	-8.39
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000614506	hsa-miR-6867-3p	148102797	148102804	8mer-1a	148102797	148102817	147.00	-11.27
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000615281	hsa-miR-204-5p	148102800	148102806	7mer-m8	148102799	148102821	141.00	-11.65
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000615281	hsa-miR-211-5p	148102800	148102806	7mer-m8	148102799	148102821	141.00	-11.65
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000615281	hsa-miR-4287	148102798	148102805	8mer-1a	148102798	148102816	140.00	-14.47
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000615281	hsa-miR-4685-3p	148102798	148102805	8mer-1a	148102798	148102819	140.00	-15.67
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000615281	hsa-miR-6832-3p	148102800	148102807	8mer-1a	148102800	148102819	143.00	-8.39
CAediting_93261	chr1_148102803_-	ENSG00000263956.4	ENST00000615281	hsa-miR-6867-3p	148102797	148102804	8mer-1a	148102797	148102817	147.00	-11.27
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614785	hsa-miR-4802-3p	148102826	148102832	7mer-m8	148102825	148102847	141.00	-11.10
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614015	hsa-miR-4802-3p	148102826	148102832	7mer-m8	148102825	148102847	141.00	-11.10
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614506	hsa-miR-4802-3p	148102826	148102832	7mer-m8	148102825	148102847	141.00	-11.10
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000615281	hsa-miR-4802-3p	148102826	148102832	7mer-m8	148102825	148102847	141.00	-11.10
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614785	hsa-miR-1972	148102847	148102853	7mer-m8	148102846	148102867	145.00	-24.22
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614785	hsa-miR-1972	148102847	148102853	7mer-m8	148102846	148102867	145.00	-24.22
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614015	hsa-miR-1972	148102847	148102853	7mer-m8	148102846	148102867	145.00	-24.22
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614015	hsa-miR-1972	148102847	148102853	7mer-m8	148102846	148102867	145.00	-24.22
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614506	hsa-miR-1972	148102847	148102853	7mer-m8	148102846	148102867	145.00	-24.22
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614506	hsa-miR-1972	148102847	148102853	7mer-m8	148102846	148102867	145.00	-24.22
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000615281	hsa-miR-1972	148102847	148102853	7mer-m8	148102846	148102867	145.00	-24.22
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000615281	hsa-miR-1972	148102847	148102853	7mer-m8	148102846	148102867	145.00	-24.22
CAediting_93264	chr1_148102873_-	ENSG00000263956.4	ENST00000614785	hsa-miR-3692-3p	148102870	148102876	7mer-m8	148102869	148102888	151.00	-22.17
CAediting_93264	chr1_148102873_-	ENSG00000263956.4	ENST00000614015	hsa-miR-3692-3p	148102870	148102876	7mer-m8	148102869	148102888	151.00	-22.17
CAediting_93264	chr1_148102873_-	ENSG00000263956.4	ENST00000614506	hsa-miR-3692-3p	148102870	148102876	7mer-m8	148102869	148102888	151.00	-22.17
CAediting_93264	chr1_148102873_-	ENSG00000263956.4	ENST00000615281	hsa-miR-3692-3p	148102870	148102876	7mer-m8	148102869	148102888	151.00	-22.17

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614785	hsa-miR-223-3p	148102850	148102856	7mer-m8	148102849	148102869	146	-12.93
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614785	hsa-miR-3170	148102727	148102734	8mer-1a	148102727	148102747	151	-15.79
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614785	hsa-miR-3689a-5p	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614785	hsa-miR-3689b-5p	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614785	hsa-miR-3689e	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614785	hsa-miR-3689f	148102823	148102829	7mer-m8	148102822	148102842	146	-10.66
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614785	hsa-miR-561-3p	148102585	148102591	7mer-m8	148102584	148102606	151	-7.49
CAediting_93257	chr1_148102645_-	ENSG00000263956.4	ENST00000614785	hsa-miR-6807-5p	148102644	148102651	8mer-1a	148102644	148102665	145	-18.35
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614785	hsa-miR-6855-5p	148102727	148102734	8mer-1a	148102727	148102755	152	-20.46
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614785	hsa-miR-8076	148102826	148102832	7mer-m8	148102825	148102847	155	-12.69
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614785	hsa-miR-942-5p	148102795	148102801	7mer-1a	148102795	148102816	146	-20.42
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614015	hsa-miR-223-3p	148102850	148102856	7mer-m8	148102849	148102869	146	-12.93
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614015	hsa-miR-3170	148102727	148102734	8mer-1a	148102727	148102747	151	-15.79
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614015	hsa-miR-3689a-5p	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614015	hsa-miR-3689b-5p	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614015	hsa-miR-3689e	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614015	hsa-miR-3689f	148102823	148102829	7mer-m8	148102822	148102842	146	-10.66
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614015	hsa-miR-561-3p	148102585	148102591	7mer-m8	148102584	148102606	151	-7.49
CAediting_93257	chr1_148102645_-	ENSG00000263956.4	ENST00000614015	hsa-miR-6807-5p	148102644	148102651	8mer-1a	148102644	148102665	145	-18.35
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614015	hsa-miR-6855-5p	148102727	148102734	8mer-1a	148102727	148102755	152	-20.46
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614015	hsa-miR-8076	148102826	148102832	7mer-m8	148102825	148102847	155	-12.69
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614015	hsa-miR-942-5p	148102795	148102801	7mer-1a	148102795	148102816	146	-20.42
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000614506	hsa-miR-223-3p	148102850	148102856	7mer-m8	148102849	148102869	146	-12.93
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614506	hsa-miR-3170	148102727	148102734	8mer-1a	148102727	148102747	151	-15.79
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614506	hsa-miR-3689a-5p	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614506	hsa-miR-3689b-5p	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614506	hsa-miR-3689e	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614506	hsa-miR-3689f	148102823	148102829	7mer-m8	148102822	148102842	146	-10.66
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000614506	hsa-miR-561-3p	148102585	148102591	7mer-m8	148102584	148102606	151	-7.49
CAediting_93257	chr1_148102645_-	ENSG00000263956.4	ENST00000614506	hsa-miR-6807-5p	148102644	148102651	8mer-1a	148102644	148102665	145	-18.35
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000614506	hsa-miR-6855-5p	148102727	148102734	8mer-1a	148102727	148102755	152	-20.46
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000614506	hsa-miR-8076	148102826	148102832	7mer-m8	148102825	148102847	155	-12.69
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000614506	hsa-miR-942-5p	148102795	148102801	7mer-1a	148102795	148102816	146	-20.42
CAediting_93263	chr1_148102851_-	ENSG00000263956.4	ENST00000615281	hsa-miR-223-3p	148102850	148102856	7mer-m8	148102849	148102869	146	-12.93
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000615281	hsa-miR-3170	148102727	148102734	8mer-1a	148102727	148102747	151	-15.79
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000615281	hsa-miR-3689a-5p	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000615281	hsa-miR-3689b-5p	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000615281	hsa-miR-3689e	148102823	148102829	7mer-m8	148102822	148102843	140	-10.31
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000615281	hsa-miR-3689f	148102823	148102829	7mer-m8	148102822	148102842	146	-10.66
CAediting_93255	chr1_148102590_-	ENSG00000263956.4	ENST00000615281	hsa-miR-561-3p	148102585	148102591	7mer-m8	148102584	148102606	151	-7.49
CAediting_93257	chr1_148102645_-	ENSG00000263956.4	ENST00000615281	hsa-miR-6807-5p	148102644	148102651	8mer-1a	148102644	148102665	145	-18.35
CAediting_93258	chr1_148102733_-	ENSG00000263956.4	ENST00000615281	hsa-miR-6855-5p	148102727	148102734	8mer-1a	148102727	148102755	152	-20.46
CAediting_93262	chr1_148102827_-	ENSG00000263956.4	ENST00000615281	hsa-miR-8076	148102826	148102832	7mer-m8	148102825	148102847	155	-12.69
CAediting_93260	chr1_148102797_-	ENSG00000263956.4	ENST00000615281	hsa-miR-942-5p	148102795	148102801	7mer-1a	148102795	148102816	146	-20.42

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000263956.4	ENST00000614785	hsa-miR-200b-3p	148103057	148103063	7mer-m8	148103056	148103077	149	-11.59
CAediting_393	chr1_1167164_+	ENSG00000263956.4	ENST00000614015	hsa-miR-200b-3p	148103057	148103063	7mer-m8	148103056	148103077	149	-11.59
CAediting_393	chr1_1167164_+	ENSG00000263956.4	ENST00000614506	hsa-miR-200b-3p	148103057	148103063	7mer-m8	148103056	148103077	149	-11.59
CAediting_393	chr1_1167164_+	ENSG00000263956.4	ENST00000615281	hsa-miR-200b-3p	148103057	148103063	7mer-m8	148103056	148103077	149	-11.59
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000614785	hsa-miR-548aa	148103280	148103287	8mer-1a	148103280	148103306	157	-16.24
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000614785	hsa-miR-548aa	148103697	148103703	7mer-m8	148103696	148103721	144	-19.64
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614785	hsa-miR-641	148103353	148103359	7mer-m8	148103352	148103381	144	-19.81
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000614015	hsa-miR-548aa	148103280	148103287	8mer-1a	148103280	148103306	157	-16.24
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000614015	hsa-miR-548aa	148103697	148103703	7mer-m8	148103696	148103721	144	-19.64
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614015	hsa-miR-641	148103353	148103359	7mer-m8	148103352	148103381	144	-19.81
CAediting_1229415	chr17_67471547_+	ENSG00000263956.4	ENST00000614506	hsa-miR-548aa	148105376	148105382	7mer-m8	148105375	148105398	153	-14.49
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000614506	hsa-miR-548aa	148103280	148103287	8mer-1a	148103280	148103306	157	-16.24
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000614506	hsa-miR-548aa	148103697	148103703	7mer-m8	148103696	148103721	144	-19.64
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614506	hsa-miR-641	148103353	148103359	7mer-m8	148103352	148103381	144	-19.81
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000615281	hsa-miR-548aa	148103280	148103287	8mer-1a	148103280	148103306	157	-16.24
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000615281	hsa-miR-548aa	148103697	148103703	7mer-m8	148103696	148103721	144	-19.64
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000615281	hsa-miR-641	148103353	148103359	7mer-m8	148103352	148103381	144	-19.81

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000614785	hsa-miR-548aa	148102398	148102404	7mer-m8	148102397	148102419	152	-11.04
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000614785	hsa-miR-548aa	148102398	148102404	7mer-m8	148102397	148102419	152	-11.04
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000614785	hsa-miR-548aa	148102087	148102093	7mer-m8	148102086	148102108	143	-6.51
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000614785	hsa-miR-548aa	148102087	148102093	7mer-m8	148102086	148102108	143	-6.51
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614785	hsa-miR-641	148102610	148102616	7mer-m8	148102609	148102635	147	-15.43
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614785	hsa-miR-641	148103252	148103257	6mer	148103251	148103275	140	-13.87
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000614015	hsa-miR-548aa	148102398	148102404	7mer-m8	148102397	148102419	152	-11.04
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000614015	hsa-miR-548aa	148102398	148102404	7mer-m8	148102397	148102419	152	-11.04
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000614015	hsa-miR-548aa	148102087	148102093	7mer-m8	148102086	148102108	143	-6.51
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000614015	hsa-miR-548aa	148102087	148102093	7mer-m8	148102086	148102108	143	-6.51
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614015	hsa-miR-641	148102610	148102616	7mer-m8	148102609	148102635	147	-15.43
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614015	hsa-miR-641	148103252	148103257	6mer	148103251	148103275	140	-13.87
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000614506	hsa-miR-548aa	148102398	148102404	7mer-m8	148102397	148102419	152	-11.04
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000614506	hsa-miR-548aa	148102398	148102404	7mer-m8	148102397	148102419	152	-11.04
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614506	hsa-miR-641	148102610	148102616	7mer-m8	148102609	148102635	147	-15.43
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000614506	hsa-miR-641	148103252	148103257	6mer	148103251	148103275	140	-13.87
CAediting_1229413	chr17_67471544_+	ENSG00000263956.4	ENST00000615281	hsa-miR-548aa	148102398	148102404	7mer-m8	148102397	148102419	152	-11.04
CAediting_1229414	chr17_67471546_+	ENSG00000263956.4	ENST00000615281	hsa-miR-548aa	148102398	148102404	7mer-m8	148102397	148102419	152	-11.04
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000615281	hsa-miR-641	148102610	148102616	7mer-m8	148102609	148102635	147	-15.43
CAediting_1351755	chr19_40282625_-	ENSG00000263956.4	ENST00000615281	hsa-miR-641	148103252	148103257	6mer	148103251	148103275	140	-13.87

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NBPF11

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000580077.4	protein_coding
ENST00000614015.3	protein_coding
ENST00000614506.3	nonsense_mediated_decay
ENST00000614785.3	protein_coding
ENST00000615281.3	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_93255	ENST00000580077.4	chr1_148102590_-	-1846.90	-1847.20	-1863.90
CAediting_93256	ENST00000580077.4	chr1_148102644_-	-1853.40	-1847.20	-1863.90
CAediting_93257	ENST00000580077.4	chr1_148102645_-	-1846.50	-1847.20	-1863.90
CAediting_93258	ENST00000580077.4	chr1_148102733_-	-1847.20	-1847.20	-1863.90
CAediting_93259	ENST00000580077.4	chr1_148102734_-	-1847.60	-1847.20	-1863.90
CAediting_93260	ENST00000580077.4	chr1_148102797_-	-1853.80	-1847.20	-1863.90
CAediting_93261	ENST00000580077.4	chr1_148102803_-	-1846.90	-1847.20	-1863.90
CAediting_93262	ENST00000580077.4	chr1_148102827_-	-1853.40	-1847.20	-1863.90
CAediting_93263	ENST00000580077.4	chr1_148102851_-	-1846.60	-1847.20	-1863.90
CAediting_93264	ENST00000580077.4	chr1_148102873_-	-1846.90	-1847.20	-1863.90
CAediting_93255	ENST00000614015.3	chr1_148102590_-	-1500.60	-1497.60	-1517.60
CAediting_93256	ENST00000614015.3	chr1_148102644_-	-1503.80	-1497.60	-1517.60
CAediting_93257	ENST00000614015.3	chr1_148102645_-	-1496.90	-1497.60	-1517.60
CAediting_93258	ENST00000614015.3	chr1_148102733_-	-1497.60	-1497.60	-1517.60
CAediting_93259	ENST00000614015.3	chr1_148102734_-	-1498.00	-1497.60	-1517.60
CAediting_93260	ENST00000614015.3	chr1_148102797_-	-1504.20	-1497.60	-1517.60
CAediting_93261	ENST00000614015.3	chr1_148102803_-	-1497.30	-1497.60	-1517.60
CAediting_93262	ENST00000614015.3	chr1_148102827_-	-1503.80	-1497.60	-1517.60
CAediting_93263	ENST00000614015.3	chr1_148102851_-	-1497.00	-1497.60	-1517.60
CAediting_93264	ENST00000614015.3	chr1_148102873_-	-1497.30	-1497.60	-1517.60
CAediting_93255	ENST00000614506.3	chr1_148102590_-	-1710.70	-1709.50	-1727.70
CAediting_93256	ENST00000614506.3	chr1_148102644_-	-1715.70	-1709.50	-1727.70
CAediting_93257	ENST00000614506.3	chr1_148102645_-	-1708.80	-1709.50	-1727.70
CAediting_93258	ENST00000614506.3	chr1_148102733_-	-1709.50	-1709.50	-1727.70
CAediting_93259	ENST00000614506.3	chr1_148102734_-	-1709.90	-1709.50	-1727.70
CAediting_93260	ENST00000614506.3	chr1_148102797_-	-1716.10	-1709.50	-1727.70
CAediting_93261	ENST00000614506.3	chr1_148102803_-	-1709.20	-1709.50	-1727.70
CAediting_93262	ENST00000614506.3	chr1_148102827_-	-1715.70	-1709.50	-1727.70
CAediting_93263	ENST00000614506.3	chr1_148102851_-	-1708.90	-1709.50	-1727.70
CAediting_93264	ENST00000614506.3	chr1_148102873_-	-1709.20	-1709.50	-1727.70
CAediting_93255	ENST00000614785.3	chr1_148102590_-	-1398.50	-1396.10	-1415.50
CAediting_93256	ENST00000614785.3	chr1_148102644_-	-1402.30	-1396.10	-1415.50
CAediting_93257	ENST00000614785.3	chr1_148102645_-	-1395.40	-1396.10	-1415.50
CAediting_93258	ENST00000614785.3	chr1_148102733_-	-1396.10	-1396.10	-1415.50
CAediting_93259	ENST00000614785.3	chr1_148102734_-	-1396.50	-1396.10	-1415.50
CAediting_93260	ENST00000614785.3	chr1_148102797_-	-1402.70	-1396.10	-1415.50
CAediting_93261	ENST00000614785.3	chr1_148102803_-	-1395.80	-1396.10	-1415.50
CAediting_93262	ENST00000614785.3	chr1_148102827_-	-1402.30	-1396.10	-1415.50
CAediting_93263	ENST00000614785.3	chr1_148102851_-	-1395.50	-1396.10	-1415.50
CAediting_93264	ENST00000614785.3	chr1_148102873_-	-1395.80	-1396.10	-1415.50
CAediting_93255	ENST00000615281.3	chr1_148102590_-	-1889.50	-1886.50	-1906.50
CAediting_93256	ENST00000615281.3	chr1_148102644_-	-1892.70	-1886.50	-1906.50
CAediting_93257	ENST00000615281.3	chr1_148102645_-	-1885.80	-1886.50	-1906.50
CAediting_93258	ENST00000615281.3	chr1_148102733_-	-1886.50	-1886.50	-1906.50
CAediting_93259	ENST00000615281.3	chr1_148102734_-	-1886.90	-1886.50	-1906.50
CAediting_93260	ENST00000615281.3	chr1_148102797_-	-1893.10	-1886.50	-1906.50
CAediting_93261	ENST00000615281.3	chr1_148102803_-	-1886.20	-1886.50	-1906.50
CAediting_93262	ENST00000615281.3	chr1_148102827_-	-1892.70	-1886.50	-1906.50
CAediting_93263	ENST00000615281.3	chr1_148102851_-	-1885.90	-1886.50	-1906.50
CAediting_93264	ENST00000615281.3	chr1_148102873_-	-1886.20	-1886.50	-1906.50

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Relation with ADAR for NBPF11

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_93256	chr1_148102644_-	1.58481703965259e-12	0.444820105292623	.	.	.	.
LGG	CAediting_93256	chr1_148102644_-	0.000279882031774189	0.191450602976475	.	.	0.00423134525406329	0.151258584173273
BRCA	CAediting_93256	chr1_148102644_-	7.20889768252612e-25	0.359669245574841	.	.	.	.
LIHC	CAediting_93256	chr1_148102644_-	5.9283624976614e-09	0.384609159789676	.	.	.	.
CESC	CAediting_93256	chr1_148102644_-	0.000446817644185617	0.277768062713707	.	.	.	.
LUAD	CAediting_93256	chr1_148102644_-	0.000327934790112423	0.230907008599289	.	.	.	.
COAD	CAediting_93256	chr1_148102644_-	0.0107615882640184	0.35423888706541	0.0105902946624252	0.354963968752972	.	.
LUSC	CAediting_93256	chr1_148102644_-	2.32565981288203e-08	0.391528218892258	.	.	0.0101608088461797	0.186066339999148
GBM	CAediting_93256	chr1_148102644_-	0.0413652263647109	0.181297133573246	.	.	.	.
PRAD	CAediting_93256	chr1_148102644_-	0.0006647353408075	0.198060664937777	.	.	.	.
THCA	CAediting_93256	chr1_148102644_-	5.97844393067831e-11	0.303724156878754	.	.	.	.
KIRC	CAediting_93256	chr1_148102644_-	0.0266129769935809	0.141083045622481	.	.	.	.
UCEC	CAediting_93256	chr1_148102644_-	1.94703952385935e-06	0.392307557701766	.	.	.	.
KIRP	CAediting_93256	chr1_148102644_-	.	.	.	.	0.0290778352344933	0.194503932482347
ESCA	CAediting_93256	chr1_148102644_-	.	.	0.0348819591725476	0.183115176335491	.	.
OV	CAediting_93256	chr1_148102644_-	1.27052283682208e-05	0.250714498544071	.	.	.	.
PAAD	CAediting_93256	chr1_148102644_-	0.0166539149447008	0.265365126775898	.	.	.	.
SKCM	CAediting_93256	chr1_148102644_-	2.0003952123613e-08	0.347644583446632	0.00373853140174563	0.183843249463916	.	.
SARC	CAediting_93256	chr1_148102644_-	0.000109232799687042	0.320072692160206	.	.	.	.
TGCT	CAediting_93256	chr1_148102644_-	1.83428821234392e-10	0.505809551130469	.	.	.	.
THYM	CAediting_93256	chr1_148102644_-	1.94612674539066e-09	0.535696138526782	.	.	.	.
BRCA	CAediting_93257	chr1_148102645_-	0.0396138363099773	0.126736225115566	.	.	.	.
LUAD	CAediting_93257	chr1_148102645_-	.	.	.	.	0.0431859133861508	0.253588788922213

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Relation with cancer stages for NBPF11

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_93256	chr1_148102644_-	0.0382411032069176	-0.320929161605984
ESCA	pathologic_stage	CAediting_93256	chr1_148102644_-	0.0421929234857956	0.188973821923344
HNSC	pathologic_stage	CAediting_93256	chr1_148102644_-	0.0148716452990906	0.33287622963509
KIRC	pathologic_stage	CAediting_93256	chr1_148102644_-	1.03533774593695e-05	0.27758619362085
THCA	pathologic_stage	CAediting_93256	chr1_148102644_-	7.17567916781897e-05	0.18833466881746

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Relation with survival for NBPF11

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for NBPF11

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NBPF11

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene