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Editing gene: CC2D1B (CAeditome ID:200014)

Gene summary for CC2D1B

Gene summary

Gene information	Gene symbol	CC2D1B
	Gene ID	200014
	Gene name	coiled-coil and C2 domain containing 1B
	Synonyms	Lgd1
	Cytomap	1p32.3
	Type of gene	protein-coding
	Description	coiled-coil and C2 domain-containing protein 1BFRE under dual repression-binding protein 2five prime repressor element under dual repression-binding protein 2freud-2
	Modification date	20210518
	UniProtAcc	Q5T0F9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CC2D1B	GO:0005654	Coiled-coil and C2 domain-containing protein 1B	0000052
CC2D1B	GO:0043231	Coiled-coil and C2 domain-containing protein 1B	0000052

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RNA A-to-I events for CC2D1B

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000154222.13

RNA A-to-I editing events in Cancer.

CAediting_64327(52347413, -), CAediting_64328(52347447, -), CAediting_64329(52347456, -), CAediting_64330(52347476, -), CAediting_64331(52347477, -), CAediting_64332(52347485, -), CAediting_64333(52347486, -), CAediting_64334(52347494, -), CAediting_64335(52347508, -), CAediting_64336(52347512, -), CAediting_64337(52347518, -), CAediting_64338(52347544, -), CAediting_64339(52347547, -), CAediting_64340(52347548, -), CAediting_64341(52347552, -), CAediting_64342(52347575, -), CAediting_64343(52347585, -), CAediting_64344(52347660, -), CAediting_64345(52347680, -), CAediting_64346(52347681, -), CAediting_64347(52347689, -), CAediting_64348(52348203, -), CAediting_64349(52348222, -), CAediting_64350(52348237, -), CAediting_64351(52348238, -), CAediting_64352(52348262, -), CAediting_64353(52348286, -), CAediting_64354(52349957, -), CAediting_64355(52349976, -), CAediting_64356(52349982, -), CAediting_64357(52349986, -), CAediting_64358(52349991, -), CAediting_64359(52349995, -), CAediting_64360(52350015, -), CAediting_64361(52350016, -), CAediting_64362(52350021, -), CAediting_64363(52350024, -), CAediting_64364(52350027, -), CAediting_64365(52350030, -), CAediting_64366(52350034, -), CAediting_64367(52350051, -), CAediting_64368(52350057, -), CAediting_64369(52350083, -), CAediting_64370(52350086, -), CAediting_64371(52350087, -), CAediting_64372(52350091, -), CAediting_64373(52350095, -), CAediting_64374(52350096, -), CAediting_64375(52350097, -), CAediting_64376(52350111, -), CAediting_64377(52350118, -), CAediting_64378(52350127, -), CAediting_64379(52350157, -), CAediting_64380(52350187, -), CAediting_64381(52350188, -), CAediting_64382(52350210, -), CAediting_64383(52350762, -), CAediting_64384(52350773, -), CAediting_64385(52350775, -), CAediting_64386(52350779, -), CAediting_64387(52350781, -), CAediting_64388(52350783, -), CAediting_64389(52350806, -), CAediting_64390(52350811, -), CAediting_64391(52350818, -), CAediting_64392(52350822, -), CAediting_64393(52350829, -), CAediting_64394(52350831, -), CAediting_64395(52350834, -), CAediting_64396(52350835, -), CAediting_64397(52350838, -), CAediting_64398(52350843, -), CAediting_64399(52350851, -), CAediting_64400(52350855, -), CAediting_64401(52350857, -), CAediting_64402(52350859, -), CAediting_64403(52350861, -), CAediting_64404(52350867, -), CAediting_64405(52350871, -), CAediting_64406(52350874, -), CAediting_64407(52350878, -), CAediting_64408(52350883, -), CAediting_64409(52350884, -), CAediting_64410(52350902, -), CAediting_64411(52350910, -), CAediting_64412(52350913, -), CAediting_64413(52350917, -), CAediting_64414(52350918, -), CAediting_64415(52350920, -), CAediting_64416(52350922, -), CAediting_64417(52350923, -), CAediting_64418(52350924, -), CAediting_64419(52350925, -), CAediting_64420(52350929, -), CAediting_64421(52350940, -), CAediting_64422(52350941, -), CAediting_64423(52350942, -), CAediting_64424(52350948, -), CAediting_64425(52350950, -), CAediting_64426(52350951, -), CAediting_64427(52350960, -), CAediting_64428(52350963, -), CAediting_64429(52350966, -), CAediting_64430(52350970, -), CAediting_64431(52350974, -), CAediting_64432(52350979, -), CAediting_64433(52350993, -), CAediting_64434(52351002, -), CAediting_64435(52351003, -), CAediting_64436(52351004, -), CAediting_64437(52351014, -), CAediting_64438(52351019, -), CAediting_64439(52351020, -), CAediting_64440(52351028, -), CAediting_64441(52351611, -), CAediting_64442(52351616, -), CAediting_64443(52351620, -), CAediting_64444(52351627, -), CAediting_64445(52351629, -), CAediting_64446(52351641, -), CAediting_64447(52351642, -), CAediting_64448(52351643, -), CAediting_64449(52351651, -), CAediting_64450(52351656, -), CAediting_64451(52351672, -), CAediting_64452(52351679, -), CAediting_64453(52351692, -), CAediting_64454(52351716, -), CAediting_64455(52351718, -), CAediting_64456(52351727, -), CAediting_64457(52351735, -), CAediting_64458(52351736, -), CAediting_64459(52351740, -), CAediting_64460(52351752, -), CAediting_64461(52351756, -), CAediting_64462(52351760, -), CAediting_64463(52351762, -), CAediting_64464(52351772, -), CAediting_64465(52351775, -), CAediting_64466(52351784, -), CAediting_64467(52351801, -), CAediting_64468(52351802, -), CAediting_64469(52351808, -), CAediting_64470(52351821, -), CAediting_64471(52351832, -), CAediting_64472(52351837, -), CAediting_64473(52351840, -), CAediting_64474(52351846, -), CAediting_64475(52351858, -), CAediting_64476(52351862, -), CAediting_64477(52351873, -), CAediting_64478(52351880, -), CAediting_64479(52351882, -),

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RNA editing positional annotations for CC2D1B using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_64327	chr1_52347413_-	ncRNA_intronic
CAediting_64328	chr1_52347447_-	ncRNA_intronic
CAediting_64329	chr1_52347456_-	ncRNA_intronic
CAediting_64330	chr1_52347476_-	ncRNA_intronic
CAediting_64331	chr1_52347477_-	ncRNA_intronic
CAediting_64332	chr1_52347485_-	ncRNA_intronic
CAediting_64333	chr1_52347486_-	ncRNA_intronic
CAediting_64334	chr1_52347494_-	ncRNA_intronic
CAediting_64335	chr1_52347508_-	ncRNA_intronic
CAediting_64336	chr1_52347512_-	ncRNA_intronic
CAediting_64337	chr1_52347518_-	ncRNA_intronic
CAediting_64338	chr1_52347544_-	ncRNA_intronic
CAediting_64339	chr1_52347547_-	ncRNA_intronic
CAediting_64340	chr1_52347548_-	ncRNA_intronic
CAediting_64341	chr1_52347552_-	ncRNA_intronic
CAediting_64342	chr1_52347575_-	ncRNA_intronic
CAediting_64343	chr1_52347585_-	ncRNA_intronic
CAediting_64344	chr1_52347660_-	ncRNA_intronic
CAediting_64345	chr1_52347680_-	ncRNA_intronic
CAediting_64346	chr1_52347681_-	ncRNA_intronic
CAediting_64347	chr1_52347689_-	ncRNA_intronic
CAediting_64348	chr1_52348203_-	ncRNA_intronic
CAediting_64349	chr1_52348222_-	ncRNA_intronic
CAediting_64350	chr1_52348237_-	ncRNA_intronic
CAediting_64351	chr1_52348238_-	ncRNA_intronic
CAediting_64352	chr1_52348262_-	ncRNA_intronic
CAediting_64353	chr1_52348286_-	ncRNA_intronic
CAediting_64354	chr1_52349957_-	ncRNA_intronic
CAediting_64355	chr1_52349976_-	ncRNA_intronic
CAediting_64356	chr1_52349982_-	ncRNA_intronic
CAediting_64357	chr1_52349986_-	ncRNA_intronic
CAediting_64358	chr1_52349991_-	ncRNA_intronic
CAediting_64359	chr1_52349995_-	ncRNA_intronic
CAediting_64360	chr1_52350015_-	ncRNA_intronic
CAediting_64361	chr1_52350016_-	ncRNA_intronic
CAediting_64362	chr1_52350021_-	ncRNA_intronic
CAediting_64363	chr1_52350024_-	ncRNA_intronic
CAediting_64364	chr1_52350027_-	ncRNA_intronic
CAediting_64365	chr1_52350030_-	ncRNA_intronic
CAediting_64366	chr1_52350034_-	ncRNA_intronic
CAediting_64367	chr1_52350051_-	ncRNA_intronic
CAediting_64368	chr1_52350057_-	ncRNA_intronic
CAediting_64369	chr1_52350083_-	ncRNA_intronic
CAediting_64370	chr1_52350086_-	ncRNA_intronic
CAediting_64371	chr1_52350087_-	ncRNA_intronic
CAediting_64372	chr1_52350091_-	ncRNA_intronic
CAediting_64373	chr1_52350095_-	ncRNA_intronic
CAediting_64374	chr1_52350096_-	ncRNA_intronic
CAediting_64375	chr1_52350097_-	ncRNA_intronic
CAediting_64376	chr1_52350111_-	ncRNA_intronic
CAediting_64377	chr1_52350118_-	ncRNA_intronic
CAediting_64378	chr1_52350127_-	ncRNA_intronic
CAediting_64379	chr1_52350157_-	ncRNA_intronic
CAediting_64380	chr1_52350187_-	ncRNA_intronic
CAediting_64381	chr1_52350188_-	ncRNA_intronic
CAediting_64382	chr1_52350210_-	ncRNA_intronic
CAediting_64383	chr1_52350762_-	ncRNA_intronic
CAediting_64384	chr1_52350773_-	ncRNA_intronic
CAediting_64385	chr1_52350775_-	ncRNA_intronic
CAediting_64386	chr1_52350779_-	ncRNA_intronic
CAediting_64387	chr1_52350781_-	ncRNA_intronic
CAediting_64388	chr1_52350783_-	ncRNA_intronic
CAediting_64389	chr1_52350806_-	ncRNA_intronic
CAediting_64390	chr1_52350811_-	ncRNA_intronic
CAediting_64391	chr1_52350818_-	ncRNA_intronic
CAediting_64392	chr1_52350822_-	ncRNA_intronic
CAediting_64393	chr1_52350829_-	ncRNA_intronic
CAediting_64394	chr1_52350831_-	ncRNA_intronic
CAediting_64395	chr1_52350834_-	ncRNA_intronic
CAediting_64396	chr1_52350835_-	ncRNA_intronic
CAediting_64397	chr1_52350838_-	ncRNA_intronic
CAediting_64398	chr1_52350843_-	ncRNA_intronic
CAediting_64399	chr1_52350851_-	ncRNA_intronic
CAediting_64400	chr1_52350855_-	ncRNA_intronic
CAediting_64401	chr1_52350857_-	ncRNA_intronic
CAediting_64402	chr1_52350859_-	ncRNA_intronic
CAediting_64403	chr1_52350861_-	ncRNA_intronic
CAediting_64404	chr1_52350867_-	ncRNA_intronic
CAediting_64405	chr1_52350871_-	ncRNA_intronic
CAediting_64406	chr1_52350874_-	ncRNA_intronic
CAediting_64407	chr1_52350878_-	ncRNA_intronic
CAediting_64408	chr1_52350883_-	ncRNA_intronic
CAediting_64409	chr1_52350884_-	ncRNA_intronic
CAediting_64410	chr1_52350902_-	ncRNA_intronic
CAediting_64411	chr1_52350910_-	ncRNA_intronic
CAediting_64412	chr1_52350913_-	ncRNA_intronic
CAediting_64413	chr1_52350917_-	ncRNA_intronic
CAediting_64414	chr1_52350918_-	ncRNA_intronic
CAediting_64415	chr1_52350920_-	ncRNA_intronic
CAediting_64416	chr1_52350922_-	ncRNA_intronic
CAediting_64417	chr1_52350923_-	ncRNA_intronic
CAediting_64418	chr1_52350924_-	ncRNA_intronic
CAediting_64419	chr1_52350925_-	ncRNA_intronic
CAediting_64420	chr1_52350929_-	ncRNA_intronic
CAediting_64421	chr1_52350940_-	ncRNA_intronic
CAediting_64422	chr1_52350941_-	ncRNA_intronic
CAediting_64423	chr1_52350942_-	ncRNA_intronic
CAediting_64424	chr1_52350948_-	ncRNA_intronic
CAediting_64425	chr1_52350950_-	ncRNA_intronic
CAediting_64426	chr1_52350951_-	ncRNA_intronic
CAediting_64427	chr1_52350960_-	ncRNA_intronic
CAediting_64428	chr1_52350963_-	ncRNA_intronic
CAediting_64429	chr1_52350966_-	ncRNA_intronic
CAediting_64430	chr1_52350970_-	ncRNA_intronic
CAediting_64431	chr1_52350974_-	ncRNA_intronic
CAediting_64432	chr1_52350979_-	ncRNA_intronic
CAediting_64433	chr1_52350993_-	ncRNA_intronic
CAediting_64434	chr1_52351002_-	ncRNA_intronic
CAediting_64435	chr1_52351003_-	ncRNA_intronic
CAediting_64436	chr1_52351004_-	ncRNA_intronic
CAediting_64437	chr1_52351014_-	ncRNA_intronic
CAediting_64438	chr1_52351019_-	ncRNA_intronic
CAediting_64439	chr1_52351020_-	ncRNA_intronic
CAediting_64440	chr1_52351028_-	ncRNA_intronic
CAediting_64441	chr1_52351611_-	ncRNA_intronic
CAediting_64442	chr1_52351616_-	ncRNA_intronic
CAediting_64443	chr1_52351620_-	ncRNA_intronic
CAediting_64444	chr1_52351627_-	ncRNA_intronic
CAediting_64445	chr1_52351629_-	ncRNA_intronic
CAediting_64446	chr1_52351641_-	ncRNA_intronic
CAediting_64447	chr1_52351642_-	ncRNA_intronic
CAediting_64448	chr1_52351643_-	ncRNA_intronic
CAediting_64449	chr1_52351651_-	ncRNA_intronic
CAediting_64450	chr1_52351656_-	ncRNA_intronic
CAediting_64451	chr1_52351672_-	ncRNA_intronic
CAediting_64452	chr1_52351679_-	ncRNA_intronic
CAediting_64453	chr1_52351692_-	ncRNA_intronic
CAediting_64454	chr1_52351716_-	ncRNA_intronic
CAediting_64455	chr1_52351718_-	ncRNA_intronic
CAediting_64456	chr1_52351727_-	ncRNA_intronic
CAediting_64457	chr1_52351735_-	ncRNA_intronic
CAediting_64458	chr1_52351736_-	ncRNA_intronic
CAediting_64459	chr1_52351740_-	ncRNA_intronic
CAediting_64460	chr1_52351752_-	ncRNA_intronic
CAediting_64461	chr1_52351756_-	ncRNA_intronic
CAediting_64462	chr1_52351760_-	ncRNA_intronic
CAediting_64463	chr1_52351762_-	ncRNA_intronic
CAediting_64464	chr1_52351772_-	ncRNA_intronic
CAediting_64465	chr1_52351775_-	ncRNA_intronic
CAediting_64466	chr1_52351784_-	ncRNA_intronic
CAediting_64467	chr1_52351801_-	ncRNA_intronic
CAediting_64468	chr1_52351802_-	ncRNA_intronic
CAediting_64469	chr1_52351808_-	ncRNA_intronic
CAediting_64470	chr1_52351821_-	ncRNA_intronic
CAediting_64471	chr1_52351832_-	ncRNA_intronic
CAediting_64472	chr1_52351837_-	ncRNA_intronic
CAediting_64473	chr1_52351840_-	ncRNA_intronic
CAediting_64474	chr1_52351846_-	ncRNA_intronic
CAediting_64475	chr1_52351858_-	ncRNA_intronic
CAediting_64476	chr1_52351862_-	ncRNA_intronic
CAediting_64477	chr1_52351873_-	ncRNA_intronic
CAediting_64478	chr1_52351880_-	ncRNA_intronic
CAediting_64479	chr1_52351882_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_64327	chr1_52347413_-	SINE	Alu	AluSx1
CAediting_64328	chr1_52347447_-	SINE	Alu	AluSx1
CAediting_64329	chr1_52347456_-	SINE	Alu	AluSx1
CAediting_64330	chr1_52347476_-	SINE	Alu	AluSx1
CAediting_64331	chr1_52347477_-	SINE	Alu	AluSx1
CAediting_64332	chr1_52347485_-	SINE	Alu	AluSx1
CAediting_64333	chr1_52347486_-	SINE	Alu	AluSx1
CAediting_64334	chr1_52347494_-	SINE	Alu	AluSx1
CAediting_64335	chr1_52347508_-	SINE	Alu	AluSx1
CAediting_64336	chr1_52347512_-	SINE	Alu	AluSx1
CAediting_64337	chr1_52347518_-	SINE	Alu	AluSx1
CAediting_64338	chr1_52347544_-	SINE	Alu	AluSx1
CAediting_64339	chr1_52347547_-	SINE	Alu	AluSx1
CAediting_64340	chr1_52347548_-	SINE	Alu	AluSx1
CAediting_64341	chr1_52347552_-	SINE	Alu	AluSx1
CAediting_64342	chr1_52347575_-	SINE	Alu	AluSx1
CAediting_64343	chr1_52347585_-	SINE	Alu	AluSx1
CAediting_64344	chr1_52347660_-	SINE	Alu	AluSx1
CAediting_64345	chr1_52347680_-	SINE	Alu	AluSx1
CAediting_64346	chr1_52347681_-	SINE	Alu	AluSx1
CAediting_64347	chr1_52347689_-	SINE	Alu	AluSx1
CAediting_64348	chr1_52348203_-	SINE	Alu	AluJr
CAediting_64349	chr1_52348222_-	SINE	Alu	AluJr
CAediting_64350	chr1_52348237_-	SINE	Alu	AluJr
CAediting_64351	chr1_52348238_-	SINE	Alu	AluJr
CAediting_64352	chr1_52348262_-	SINE	Alu	AluJr
CAediting_64353	chr1_52348286_-	SINE	Alu	AluJr
CAediting_64354	chr1_52349957_-	SINE	Alu	AluSp
CAediting_64355	chr1_52349976_-	SINE	Alu	AluSp
CAediting_64356	chr1_52349982_-	SINE	Alu	AluSp
CAediting_64357	chr1_52349986_-	SINE	Alu	AluSp
CAediting_64358	chr1_52349991_-	SINE	Alu	AluSp
CAediting_64359	chr1_52349995_-	SINE	Alu	AluSp
CAediting_64360	chr1_52350015_-	SINE	Alu	AluSp
CAediting_64361	chr1_52350016_-	SINE	Alu	AluSp
CAediting_64362	chr1_52350021_-	SINE	Alu	AluSp
CAediting_64363	chr1_52350024_-	SINE	Alu	AluSp
CAediting_64364	chr1_52350027_-	SINE	Alu	AluSp
CAediting_64365	chr1_52350030_-	SINE	Alu	AluSp
CAediting_64366	chr1_52350034_-	SINE	Alu	AluSp
CAediting_64367	chr1_52350051_-	SINE	Alu	AluSp
CAediting_64368	chr1_52350057_-	SINE	Alu	AluSp
CAediting_64369	chr1_52350083_-	SINE	Alu	AluSp
CAediting_64370	chr1_52350086_-	SINE	Alu	AluSp
CAediting_64371	chr1_52350087_-	SINE	Alu	AluSp
CAediting_64372	chr1_52350091_-	SINE	Alu	AluSp
CAediting_64373	chr1_52350095_-	SINE	Alu	AluSp
CAediting_64374	chr1_52350096_-	SINE	Alu	AluSp
CAediting_64375	chr1_52350097_-	SINE	Alu	AluSp
CAediting_64376	chr1_52350111_-	SINE	Alu	AluSp
CAediting_64377	chr1_52350118_-	SINE	Alu	AluSp
CAediting_64378	chr1_52350127_-	SINE	Alu	AluSp
CAediting_64379	chr1_52350157_-	SINE	Alu	AluSp
CAediting_64380	chr1_52350187_-	SINE	Alu	AluSp
CAediting_64381	chr1_52350188_-	SINE	Alu	AluSp
CAediting_64382	chr1_52350210_-	SINE	Alu	AluSp
CAediting_64383	chr1_52350762_-	SINE	Alu	AluSx1
CAediting_64384	chr1_52350773_-	SINE	Alu	AluSx1
CAediting_64385	chr1_52350775_-	SINE	Alu	AluSx1
CAediting_64386	chr1_52350779_-	SINE	Alu	AluSx1
CAediting_64387	chr1_52350781_-	SINE	Alu	AluSx1
CAediting_64388	chr1_52350783_-	SINE	Alu	AluSx1
CAediting_64389	chr1_52350806_-	SINE	Alu	AluSx1
CAediting_64390	chr1_52350811_-	SINE	Alu	AluSx1
CAediting_64391	chr1_52350818_-	SINE	Alu	AluSx1
CAediting_64392	chr1_52350822_-	SINE	Alu	AluSx1
CAediting_64393	chr1_52350829_-	SINE	Alu	AluSx1
CAediting_64394	chr1_52350831_-	SINE	Alu	AluSx1
CAediting_64395	chr1_52350834_-	SINE	Alu	AluSx1
CAediting_64396	chr1_52350835_-	SINE	Alu	AluSx1
CAediting_64397	chr1_52350838_-	SINE	Alu	AluSx1
CAediting_64398	chr1_52350843_-	SINE	Alu	AluSx1
CAediting_64399	chr1_52350851_-	SINE	Alu	AluSx1
CAediting_64400	chr1_52350855_-	SINE	Alu	AluSx1
CAediting_64401	chr1_52350857_-	SINE	Alu	AluSx1
CAediting_64402	chr1_52350859_-	SINE	Alu	AluSx1
CAediting_64403	chr1_52350861_-	SINE	Alu	AluSx1
CAediting_64404	chr1_52350867_-	SINE	Alu	AluSx1
CAediting_64405	chr1_52350871_-	SINE	Alu	AluSx1
CAediting_64406	chr1_52350874_-	SINE	Alu	AluSx1
CAediting_64407	chr1_52350878_-	SINE	Alu	AluSx1
CAediting_64408	chr1_52350883_-	SINE	Alu	AluSx1
CAediting_64409	chr1_52350884_-	SINE	Alu	AluSx1
CAediting_64410	chr1_52350902_-	SINE	Alu	AluSx1
CAediting_64411	chr1_52350910_-	SINE	Alu	AluSx1
CAediting_64412	chr1_52350913_-	SINE	Alu	AluSx1
CAediting_64413	chr1_52350917_-	SINE	Alu	AluSx1
CAediting_64414	chr1_52350918_-	SINE	Alu	AluSx1
CAediting_64415	chr1_52350920_-	SINE	Alu	AluSx1
CAediting_64416	chr1_52350922_-	SINE	Alu	AluSx1
CAediting_64417	chr1_52350923_-	SINE	Alu	AluSx1
CAediting_64418	chr1_52350924_-	SINE	Alu	AluSx1
CAediting_64419	chr1_52350925_-	SINE	Alu	AluSx1
CAediting_64420	chr1_52350929_-	SINE	Alu	AluSx1
CAediting_64421	chr1_52350940_-	SINE	Alu	AluSx1
CAediting_64422	chr1_52350941_-	SINE	Alu	AluSx1
CAediting_64423	chr1_52350942_-	SINE	Alu	AluSx1
CAediting_64424	chr1_52350948_-	SINE	Alu	AluSx1
CAediting_64425	chr1_52350950_-	SINE	Alu	AluSx1
CAediting_64426	chr1_52350951_-	SINE	Alu	AluSx1
CAediting_64427	chr1_52350960_-	SINE	Alu	AluSx1
CAediting_64428	chr1_52350963_-	SINE	Alu	AluSx1
CAediting_64429	chr1_52350966_-	SINE	Alu	AluSx1
CAediting_64430	chr1_52350970_-	SINE	Alu	AluSx1
CAediting_64431	chr1_52350974_-	SINE	Alu	AluSx1
CAediting_64432	chr1_52350979_-	SINE	Alu	AluSx1
CAediting_64433	chr1_52350993_-	SINE	Alu	AluSx1
CAediting_64434	chr1_52351002_-	SINE	Alu	AluSx1
CAediting_64435	chr1_52351003_-	SINE	Alu	AluSx1
CAediting_64436	chr1_52351004_-	SINE	Alu	AluSx1
CAediting_64437	chr1_52351014_-	SINE	Alu	AluSx1
CAediting_64438	chr1_52351019_-	SINE	Alu	AluSx1
CAediting_64439	chr1_52351020_-	SINE	Alu	AluSx1
CAediting_64440	chr1_52351028_-	SINE	Alu	AluSx1
CAediting_64441	chr1_52351611_-	SINE	Alu	AluSx1
CAediting_64442	chr1_52351616_-	SINE	Alu	AluSx1
CAediting_64443	chr1_52351620_-	SINE	Alu	AluSx1
CAediting_64444	chr1_52351627_-	SINE	Alu	AluSx1
CAediting_64445	chr1_52351629_-	SINE	Alu	AluSx1
CAediting_64446	chr1_52351641_-	SINE	Alu	AluSx1
CAediting_64447	chr1_52351642_-	SINE	Alu	AluSx1
CAediting_64448	chr1_52351643_-	SINE	Alu	AluSx1
CAediting_64449	chr1_52351651_-	SINE	Alu	AluSx1
CAediting_64450	chr1_52351656_-	SINE	Alu	AluSx1
CAediting_64451	chr1_52351672_-	SINE	Alu	AluSx1
CAediting_64452	chr1_52351679_-	SINE	Alu	AluSx1
CAediting_64453	chr1_52351692_-	SINE	Alu	AluSx1
CAediting_64454	chr1_52351716_-	SINE	Alu	AluSx1
CAediting_64455	chr1_52351718_-	SINE	Alu	AluSx1
CAediting_64456	chr1_52351727_-	SINE	Alu	AluSx1
CAediting_64457	chr1_52351735_-	SINE	Alu	AluSx1
CAediting_64458	chr1_52351736_-	SINE	Alu	AluSx1
CAediting_64459	chr1_52351740_-	SINE	Alu	AluSx1
CAediting_64460	chr1_52351752_-	SINE	Alu	AluSx1
CAediting_64461	chr1_52351756_-	SINE	Alu	AluSx1
CAediting_64462	chr1_52351760_-	SINE	Alu	AluSx1
CAediting_64463	chr1_52351762_-	SINE	Alu	AluSx1
CAediting_64464	chr1_52351772_-	SINE	Alu	AluSx1
CAediting_64465	chr1_52351775_-	SINE	Alu	AluSx1
CAediting_64466	chr1_52351784_-	SINE	Alu	AluSx1
CAediting_64467	chr1_52351801_-	SINE	Alu	AluSx1
CAediting_64468	chr1_52351802_-	SINE	Alu	AluSx1
CAediting_64469	chr1_52351808_-	SINE	Alu	AluSx1
CAediting_64470	chr1_52351821_-	SINE	Alu	AluSx1
CAediting_64471	chr1_52351832_-	SINE	Alu	AluSx1
CAediting_64472	chr1_52351837_-	SINE	Alu	AluSx1
CAediting_64473	chr1_52351840_-	SINE	Alu	AluSx1
CAediting_64474	chr1_52351846_-	SINE	Alu	AluSx1
CAediting_64475	chr1_52351858_-	SINE	Alu	AluSx1
CAediting_64476	chr1_52351862_-	SINE	Alu	AluSx1
CAediting_64477	chr1_52351873_-	SINE	Alu	AluSx1
CAediting_64478	chr1_52351880_-	SINE	Alu	AluSx1
CAediting_64479	chr1_52351882_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for CC2D1B

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000154222.13.CC2D1B.

Correlation between RNA A-to-I editing and PSI for ENSG00000154222.13.CC2D1B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CC2D1B

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

GBM.CAediting_64411.ENSG00000154222.CC2D1B.png
Soverview

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Protein coding region RNA A-to-I editings for CC2D1B

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CC2D1B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_64387	chr1_52350781_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1181	52350781	52350787	7mer-m8	52350780	52350800	142.00	-22.01
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5001-3p	52350829	52350835	7mer-m8	52350828	52350853	151.00	-20.63
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-660-3p	52350833	52350839	7mer-m8	52350832	52350853	158.00	-21.41
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6791-3p	52350831	52350838	8mer-1a	52350831	52350850	156.00	-24.26
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6829-3p	52350831	52350838	8mer-1a	52350831	52350846	141.00	-22.13
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6836-3p	52350831	52350837	7mer-m8	52350830	52350849	142.00	-17.45
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3136-3p	52350840	52350846	7mer-m8	52350839	52350859	152.00	-15.47
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6724-5p	52350838	52350844	7mer-m8	52350837	52350859	160.00	-33.27
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6724-5p	52350838	52350844	7mer-m8	52350837	52350859	160.00	-33.27
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6724-5p	52350838	52350844	7mer-m8	52350837	52350859	160.00	-33.27
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6724-5p	52350838	52350844	7mer-m8	52350837	52350859	160.00	-33.27
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6773-5p	52350838	52350844	7mer-m8	52350837	52350859	153.00	-23.99
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6814-5p	52350842	52350848	7mer-m8	52350841	52350862	145.00	-18.92
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7155-3p	52350840	52350846	7mer-m8	52350839	52350857	145.00	-15.24
CAediting_64399	chr1_52350851_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4636	52350850	52350856	7mer-m8	52350849	52350871	167.00	-24.64
CAediting_64400	chr1_52350855_-	ENSG00000154222.13	ENST00000371586	hsa-miR-187-3p	52350855	52350861	7mer-m8	52350854	52350875	144.00	-18.34
CAediting_64405	chr1_52350871_-	ENSG00000154222.13	ENST00000371586	hsa-miR-2355-5p	52350867	52350873	7mer-m8	52350866	52350885	144.00	-17.06
CAediting_64406	chr1_52350874_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1207-3p	52350874	52350880	7mer-m8	52350873	52350890	140.00	-12.56
CAediting_64406	chr1_52350874_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4524a-5p	52350871	52350877	7mer-m8	52350870	52350891	141.00	-11.02
CAediting_64406	chr1_52350874_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4524b-5p	52350871	52350877	7mer-m8	52350870	52350890	140.00	-10.39
CAediting_64406	chr1_52350874_-	ENSG00000154222.13	ENST00000371586	hsa-miR-646	52350871	52350878	8mer-1a	52350871	52350889	145.00	-14.76
CAediting_64409	chr1_52350884_-	ENSG00000154222.13	ENST00000371586	hsa-miR-513a-5p	52350883	52350889	7mer-m8	52350882	52350899	140.00	-16.87
CAediting_64409	chr1_52350884_-	ENSG00000154222.13	ENST00000371586	hsa-miR-513a-5p	52350883	52350889	7mer-m8	52350882	52350899	140.00	-16.87
CAediting_64409	chr1_52350884_-	ENSG00000154222.13	ENST00000371586	hsa-miR-638	52350878	52350884	7mer-1a	52350878	52350901	157.00	-39.38
CAediting_64414	chr1_52350918_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4677-5p	52350913	52350920	8mer-1a	52350913	52350931	150.00	-10.05
CAediting_64414	chr1_52350918_-	ENSG00000154222.13	ENST00000371586	hsa-miR-578	52350916	52350922	7mer-m8	52350915	52350934	145.00	-8.77
CAediting_64414	chr1_52350918_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6739-3p	52350913	52350919	7mer-m8	52350912	52350933	153.00	-9.17
CAediting_64417	chr1_52350923_-	ENSG00000154222.13	ENST00000371586	hsa-miR-511-5p	52350919	52350926	8mer-1a	52350919	52350939	142.00	-8.05
CAediting_64418	chr1_52350924_-	ENSG00000154222.13	ENST00000371586	hsa-miR-2116-5p	52350920	52350927	8mer-1a	52350920	52350940	154.00	-17.72
CAediting_64418	chr1_52350924_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4677-5p	52350919	52350926	8mer-1a	52350919	52350940	142.00	-11.32
CAediting_64418	chr1_52350924_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6739-3p	52350918	52350925	8mer-1a	52350918	52350938	140.00	-6.55
CAediting_64420	chr1_52350929_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5091	52350929	52350935	7mer-m8	52350928	52350950	145.00	-20.99
CAediting_64420	chr1_52350929_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7846-3p	52350926	52350933	8mer-1a	52350926	52350946	149.00	-16.56
CAediting_64421	chr1_52350940_-	ENSG00000154222.13	ENST00000371586	hsa-miR-412-3p	52350940	52350946	7mer-m8	52350939	52350961	153.00	-17.30
CAediting_64421	chr1_52350940_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4508	52350935	52350941	7mer-m8	52350934	52350950	140.00	-21.85
CAediting_64421	chr1_52350940_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6754-3p	52350940	52350946	7mer-m8	52350939	52350959	144.00	-15.76
CAediting_64423	chr1_52350942_-	ENSG00000154222.13	ENST00000371586	hsa-miR-23a-5p	52350937	52350943	7mer-m8	52350936	52350958	144.00	-21.43
CAediting_64423	chr1_52350942_-	ENSG00000154222.13	ENST00000371586	hsa-miR-23b-5p	52350937	52350943	7mer-m8	52350936	52350956	156.00	-19.96
CAediting_64425	chr1_52350950_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3190-5p	52350950	52350956	7mer-m8	52350949	52350968	152.00	-19.64
CAediting_64434	chr1_52351002_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3614-3p	52350999	52351005	7mer-m8	52350998	52351022	155.00	-19.98
CAediting_64434	chr1_52351002_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4297	52351000	52351006	7mer-m8	52350999	52351014	142.00	-14.86
CAediting_64434	chr1_52351002_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5581-5p	52351000	52351006	7mer-m8	52350999	52351019	153.00	-22.33
CAediting_64435	chr1_52351003_-	ENSG00000154222.13	ENST00000371586	hsa-miR-515-5p	52351002	52351008	7mer-m8	52351001	52351024	145.00	-13.46
CAediting_64435	chr1_52351003_-	ENSG00000154222.13	ENST00000371586	hsa-miR-515-5p	52351002	52351008	7mer-m8	52351001	52351024	145.00	-13.46
CAediting_64435	chr1_52351003_-	ENSG00000154222.13	ENST00000371586	hsa-miR-519d-5p	52351002	52351009	8mer-1a	52351002	52351026	159.00	-16.41
CAediting_64435	chr1_52351003_-	ENSG00000154222.13	ENST00000371586	hsa-miR-519e-5p	52351002	52351008	7mer-m8	52351001	52351022	152.00	-17.63
CAediting_64438	chr1_52351019_-	ENSG00000154222.13	ENST00000371586	hsa-miR-8052	52351014	52351020	7mer-1a	52351014	52351032	140.00	-24.15
CAediting_64439	chr1_52351020_-	ENSG00000154222.13	ENST00000371586	hsa-miR-513a-5p	52351019	52351025	7mer-m8	52351018	52351035	144.00	-16.68
CAediting_64439	chr1_52351020_-	ENSG00000154222.13	ENST00000371586	hsa-miR-513a-5p	52351019	52351025	7mer-m8	52351018	52351035	144.00	-16.68
CAediting_64439	chr1_52351020_-	ENSG00000154222.13	ENST00000371586	hsa-miR-638	52351014	52351020	7mer-1a	52351014	52351038	157.00	-32.92
CAediting_64440	chr1_52351028_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4634	52351024	52351030	7mer-m8	52351023	52351041	145.00	-18.10
CAediting_64445	chr1_52351629_-	ENSG00000154222.13	ENST00000371586	hsa-miR-106a-3p	52351627	52351632	6mer	52351626	52351647	141.00	-21.13
CAediting_64446	chr1_52351641_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3189-3p	52351640	52351646	7mer-m8	52351639	52351662	157.00	-25.36
CAediting_64446	chr1_52351641_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6813-3p	52351639	52351645	7mer-m8	52351638	52351658	140.00	-10.68
CAediting_64456	chr1_52351727_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3613-3p	52351727	52351733	7mer-m8	52351726	52351749	154.00	-9.56
CAediting_64461	chr1_52351756_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6720-3p	52351755	52351761	7mer-m8	52351754	52351775	148.00	-18.90
CAediting_64461	chr1_52351756_-	ENSG00000154222.13	ENST00000371586	hsa-miR-9899	52351752	52351759	8mer-1a	52351752	52351774	154.00	-25.38
CAediting_64464	chr1_52351772_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4691-3p	52351768	52351774	7mer-m8	52351767	52351788	154.00	-25.40
CAediting_64467	chr1_52351801_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4539	52351801	52351806	6mer	52351800	52351819	145.00	-23.12
CAediting_64467	chr1_52351801_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6078	52351797	52351804	8mer-1a	52351797	52351815	149.00	-21.50
CAediting_64469	chr1_52351808_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1247-3p	52351806	52351812	7mer-m8	52351805	52351827	148.00	-20.17
CAediting_64470	chr1_52351821_-	ENSG00000154222.13	ENST00000371586	hsa-miR-185-3p	52351817	52351823	7mer-m8	52351816	52351837	140.00	-17.89
CAediting_64470	chr1_52351821_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6829-5p	52351818	52351824	7mer-m8	52351817	52351836	149.00	-23.00
CAediting_64470	chr1_52351821_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6846-5p	52351815	52351822	8mer-1a	52351815	52351836	160.00	-30.18
CAediting_64470	chr1_52351821_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6848-5p	52351815	52351822	8mer-1a	52351815	52351837	157.00	-30.40
CAediting_64471	chr1_52351832_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4537	52351828	52351834	7mer-m8	52351827	52351849	151.00	-24.24
CAediting_64473	chr1_52351840_-	ENSG00000154222.13	ENST00000371586	hsa-miR-122-3p	52351839	52351844	6mer	52351838	52351858	140.00	-15.68
CAediting_64383	chr1_52350762_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4329	52350761	52350768	8mer-1a	52350761	52350778	141.00	-12.54
CAediting_64384	chr1_52350773_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1915-5p	52350773	52350778	6mer	52350772	52350793	148.00	-34.40
CAediting_64384	chr1_52350773_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4312	52350772	52350777	6mer	52350771	52350788	147.00	-27.06
CAediting_64386	chr1_52350779_-	ENSG00000154222.13	ENST00000371586	hsa-miR-339-5p	52350778	52350784	7mer-m8	52350777	52350799	163.00	-27.29
CAediting_64386	chr1_52350779_-	ENSG00000154222.13	ENST00000371586	hsa-miR-874-3p	52350775	52350782	8mer-1a	52350775	52350797	155.00	-24.75
CAediting_64388	chr1_52350783_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4632-3p	52350781	52350788	8mer-1a	52350781	52350800	141.00	-23.59
CAediting_64389	chr1_52350806_-	ENSG00000154222.13	ENST00000371586	hsa-miR-891a-3p	52350802	52350808	7mer-m8	52350801	52350827	146.00	-21.21
CAediting_64391	chr1_52350818_-	ENSG00000154222.13	ENST00000371586	hsa-miR-324-3p	52350818	52350824	7mer-m8	52350817	52350839	153.00	-25.88
CAediting_64391	chr1_52350818_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5008-5p	52350813	52350819	7mer-m8	52350812	52350834	146.00	-23.66
CAediting_64392	chr1_52350822_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6511b-3p	52350817	52350822	6mer	52350816	52350838	140.00	-21.59
CAediting_64392	chr1_52350822_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6511b-3p	52350817	52350822	6mer	52350816	52350838	140.00	-21.59
CAediting_64392	chr1_52350822_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6784-3p	52350817	52350822	6mer	52350816	52350838	144.00	-25.77
CAediting_64393	chr1_52350829_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6801-3p	52350827	52350833	7mer-m8	52350826	52350842	145.00	-23.79
CAediting_64393	chr1_52350829_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6810-3p	52350827	52350833	7mer-m8	52350826	52350849	161.00	-25.17
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4292	52350834	52350841	8mer-1a	52350834	52350851	145.00	-21.05
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6791-5p	52350834	52350841	8mer-1a	52350834	52350856	147.00	-24.31
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7106-3p	52350831	52350838	8mer-1a	52350831	52350853	145.00	-16.21
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7113-3p	52350833	52350839	7mer-m8	52350832	52350854	141.00	-13.98
CAediting_64402	chr1_52350859_-	ENSG00000154222.13	ENST00000371586	hsa-miR-550b-2-5p	52350855	52350861	7mer-m8	52350854	52350875	147.00	-15.10
CAediting_64402	chr1_52350859_-	ENSG00000154222.13	ENST00000371586	hsa-miR-550b-2-5p	52350855	52350861	7mer-m8	52350854	52350875	147.00	-15.10
CAediting_64403	chr1_52350861_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3657	52350855	52350862	8mer-1a	52350855	52350878	149.00	-21.21
CAediting_64403	chr1_52350861_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4433b-5p	52350857	52350863	7mer-m8	52350856	52350876	156.00	-21.30
CAediting_64403	chr1_52350861_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6849-3p	52350861	52350867	7mer-m8	52350860	52350881	140.00	-16.11
CAediting_64403	chr1_52350861_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7977	52350859	52350865	7mer-m8	52350858	52350875	145.00	-17.62
CAediting_64404	chr1_52350867_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3943	52350863	52350869	7mer-m8	52350862	52350882	142.00	-22.28
CAediting_64412	chr1_52350913_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4676-3p	52350912	52350918	7mer-m8	52350911	52350932	140.00	-7.20
CAediting_64412	chr1_52350913_-	ENSG00000154222.13	ENST00000371586	hsa-miR-892c-3p	52350912	52350918	7mer-m8	52350911	52350932	160.00	-15.21
CAediting_64413	chr1_52350917_-	ENSG00000154222.13	ENST00000371586	hsa-miR-511-5p	52350913	52350920	8mer-1a	52350913	52350931	143.00	-7.66
CAediting_64413	chr1_52350917_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6844	52350916	52350922	7mer-m8	52350915	52350935	167.00	-10.77
CAediting_64416	chr1_52350922_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6885-3p	52350917	52350924	8mer-1a	52350917	52350937	140.00	-5.18
CAediting_64422	chr1_52350941_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1229-3p	52350940	52350946	7mer-m8	52350939	52350963	146.00	-16.14
CAediting_64422	chr1_52350941_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6511a-3p	52350940	52350947	8mer-1a	52350940	52350961	145.00	-15.78
CAediting_64422	chr1_52350941_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6511a-3p	52350940	52350947	8mer-1a	52350940	52350961	145.00	-15.78
CAediting_64422	chr1_52350941_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6511a-3p	52350940	52350947	8mer-1a	52350940	52350961	145.00	-15.78
CAediting_64422	chr1_52350941_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6511a-3p	52350940	52350947	8mer-1a	52350940	52350961	145.00	-15.78
CAediting_64422	chr1_52350941_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6511b-3p	52350940	52350947	8mer-1a	52350940	52350962	140.00	-14.97
CAediting_64422	chr1_52350941_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6511b-3p	52350940	52350947	8mer-1a	52350940	52350962	140.00	-14.97
CAediting_64424	chr1_52350948_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1306-3p	52350948	52350954	7mer-m8	52350947	52350964	152.00	-23.71
CAediting_64428	chr1_52350963_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3176	52350959	52350965	7mer-m8	52350958	52350976	152.00	-17.33
CAediting_64428	chr1_52350963_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3922-3p	52350959	52350965	7mer-m8	52350958	52350982	165.00	-28.17
CAediting_64430	chr1_52350970_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4680-5p	52350966	52350972	7mer-1a	52350966	52350986	146.00	-20.51
CAediting_64432	chr1_52350979_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4726-3p	52350978	52350984	7mer-m8	52350977	52351000	157.00	-26.64
CAediting_64436	chr1_52351004_-	ENSG00000154222.13	ENST00000371586	hsa-miR-186-3p	52351003	52351010	8mer-1a	52351003	52351027	145.00	-18.33
CAediting_64437	chr1_52351014_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6787-5p	52351011	52351017	7mer-1a	52351011	52351032	141.00	-24.50
CAediting_64441	chr1_52351611_-	ENSG00000154222.13	ENST00000371586	hsa-miR-10394-3p	52351608	52351614	7mer-m8	52351607	52351629	144.00	-24.04
CAediting_64441	chr1_52351611_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3178	52351608	52351614	7mer-m8	52351607	52351623	145.00	-24.78
CAediting_64441	chr1_52351611_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6499-5p	52351607	52351613	7mer-m8	52351606	52351626	142.00	-22.23
CAediting_64443	chr1_52351620_-	ENSG00000154222.13	ENST00000371586	hsa-miR-663b	52351615	52351621	7mer-m8	52351614	52351635	147.00	-27.49
CAediting_64444	chr1_52351627_-	ENSG00000154222.13	ENST00000371586	hsa-miR-100-5p	52351624	52351630	7mer-m8	52351623	52351645	162.00	-22.89
CAediting_64444	chr1_52351627_-	ENSG00000154222.13	ENST00000371586	hsa-miR-99a-5p	52351624	52351630	7mer-m8	52351623	52351646	155.00	-21.46
CAediting_64444	chr1_52351627_-	ENSG00000154222.13	ENST00000371586	hsa-miR-99b-5p	52351624	52351630	7mer-m8	52351623	52351646	155.00	-25.13
CAediting_64447	chr1_52351642_-	ENSG00000154222.13	ENST00000371586	hsa-miR-326	52351640	52351646	7mer-m8	52351639	52351658	140.00	-13.25
CAediting_64447	chr1_52351642_-	ENSG00000154222.13	ENST00000371586	hsa-miR-330-5p	52351640	52351646	7mer-m8	52351639	52351662	141.00	-19.11
CAediting_64447	chr1_52351642_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4314	52351641	52351647	7mer-m8	52351640	52351658	141.00	-20.85
CAediting_64447	chr1_52351642_-	ENSG00000154222.13	ENST00000371586	hsa-miR-514a-5p	52351639	52351645	7mer-m8	52351638	52351661	150.00	-18.62
CAediting_64447	chr1_52351642_-	ENSG00000154222.13	ENST00000371586	hsa-miR-514a-5p	52351639	52351645	7mer-m8	52351638	52351661	150.00	-18.62
CAediting_64447	chr1_52351642_-	ENSG00000154222.13	ENST00000371586	hsa-miR-514a-5p	52351639	52351645	7mer-m8	52351638	52351661	150.00	-18.62
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6771-5p	52351641	52351648	8mer-1a	52351641	52351660	148.00	-23.97
CAediting_64450	chr1_52351656_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6765-5p	52351651	52351657	7mer-m8	52351650	52351677	158.00	-28.25
CAediting_64452	chr1_52351679_-	ENSG00000154222.13	ENST00000371586	hsa-miR-28-5p	52351674	52351680	7mer-m8	52351673	52351693	151.00	-22.03
CAediting_64452	chr1_52351679_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3139	52351674	52351680	7mer-m8	52351673	52351695	165.00	-26.99
CAediting_64452	chr1_52351679_-	ENSG00000154222.13	ENST00000371586	hsa-miR-708-5p	52351674	52351680	7mer-m8	52351673	52351694	150.00	-20.51
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4661-5p	52351734	52351740	7mer-m8	52351733	52351752	145.00	-15.35
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548ae-3p	52351730	52351736	7mer-m8	52351729	52351749	141.00	-6.06
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548ae-3p	52351730	52351736	7mer-m8	52351729	52351749	141.00	-6.06
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548ah-3p	52351730	52351736	7mer-m8	52351729	52351751	143.00	-6.06
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548aj-3p	52351730	52351736	7mer-m8	52351729	52351749	141.00	-6.96
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548aj-3p	52351730	52351736	7mer-m8	52351729	52351749	141.00	-6.96
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548am-3p	52351730	52351736	7mer-m8	52351729	52351751	143.00	-6.06
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548aq-3p	52351730	52351736	7mer-m8	52351729	52351750	141.00	-6.06
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548j-3p	52351730	52351736	7mer-m8	52351729	52351749	141.00	-6.06
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548x-3p	52351730	52351736	7mer-m8	52351729	52351748	141.00	-6.96
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-548x-3p	52351730	52351736	7mer-m8	52351729	52351748	141.00	-6.96
CAediting_64457	chr1_52351735_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7844-5p	52351732	52351738	7mer-m8	52351731	52351752	156.00	-15.59
CAediting_64458	chr1_52351736_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1207-3p	52351735	52351742	8mer-1a	52351735	52351752	144.00	-14.78
CAediting_64458	chr1_52351736_-	ENSG00000154222.13	ENST00000371586	hsa-miR-34a-3p	52351733	52351739	7mer-m8	52351732	52351754	153.00	-12.06
CAediting_64465	chr1_52351775_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6840-3p	52351774	52351780	7mer-m8	52351773	52351795	155.00	-25.15
CAediting_64472	chr1_52351837_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4786-5p	52351832	52351839	8mer-1a	52351832	52351855	154.00	-22.44
CAediting_64472	chr1_52351837_-	ENSG00000154222.13	ENST00000371586	hsa-miR-591	52351835	52351841	7mer-m8	52351834	52351853	143.00	-18.78
CAediting_64472	chr1_52351837_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6502-3p	52351834	52351840	7mer-m8	52351833	52351853	147.00	-12.61
CAediting_64472	chr1_52351837_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6872-3p	52351837	52351843	7mer-m8	52351836	52351855	148.00	-20.99
CAediting_64475	chr1_52351858_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3940-3p	52351854	52351860	7mer-m8	52351853	52351874	151.00	-23.59
CAediting_64477	chr1_52351873_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6777-3p	52351872	52351878	7mer-m8	52351871	52351890	140.00	-14.84
CAediting_64478	chr1_52351880_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5001-3p	52351876	52351882	7mer-m8	52351875	52351896	145.00	-15.37
CAediting_64479	chr1_52351882_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4433b-5p	52351878	52351884	7mer-m8	52351877	52351897	140.00	-10.81
CAediting_64442	chr1_52351616_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3960	52351611	52351618	8mer-1a	52351611	52351630	147.00	-23.62
CAediting_64442	chr1_52351616_-	ENSG00000154222.13	ENST00000371586	hsa-miR-8072	52351611	52351618	8mer-1a	52351611	52351630	140.00	-18.29

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_64438	chr1_52351019_-	ENSG00000154222.13	ENST00000371586	hsa-miR-10399-5p	52351018	52351024	7mer-m8	52351017	52351038	144	-10.39
CAediting_64439	chr1_52351020_-	ENSG00000154222.13	ENST00000371586	hsa-miR-10399-5p	52351018	52351024	7mer-m8	52351017	52351038	144	-10.39
CAediting_64408	chr1_52350883_-	ENSG00000154222.13	ENST00000371586	hsa-miR-10399-5p	52350882	52350888	7mer-m8	52350881	52350901	140	-11.12
CAediting_64409	chr1_52350884_-	ENSG00000154222.13	ENST00000371586	hsa-miR-10399-5p	52350882	52350888	7mer-m8	52350881	52350901	140	-11.12
CAediting_64397	chr1_52350838_-	ENSG00000154222.13	ENST00000371586	hsa-miR-10400-3p	52350838	52350844	7mer-m8	52350837	52350856	145	-24.84
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-10400-3p	52350838	52350844	7mer-m8	52350837	52350856	145	-24.84
CAediting_64420	chr1_52350929_-	ENSG00000154222.13	ENST00000371586	hsa-miR-12115	52350926	52350933	8mer-1a	52350926	52350949	153	-25.01
CAediting_64465	chr1_52351775_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1266-5p	52351774	52351779	6mer	52351773	52351795	141	-23.74
CAediting_64461	chr1_52351756_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1271-3p	52351755	52351761	7mer-m8	52351754	52351773	155	-21.49
CAediting_64462	chr1_52351760_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1271-3p	52351755	52351761	7mer-m8	52351754	52351773	155	-21.49
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1273h-5p	52351642	52351649	8mer-1a	52351642	52351661	151	-19.49
CAediting_64459	chr1_52351740_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1285-3p	52351739	52351745	7mer-m8	52351738	52351759	142	-17.16
CAediting_64459	chr1_52351740_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1285-3p	52351739	52351745	7mer-m8	52351738	52351759	142	-17.16
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1343-3p	52350834	52350841	8mer-1a	52350834	52350855	140	-17.08
CAediting_64397	chr1_52350838_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1343-3p	52350834	52350841	8mer-1a	52350834	52350855	140	-17.08
CAediting_64389	chr1_52350806_-	ENSG00000154222.13	ENST00000371586	hsa-miR-150-3p	52350803	52350809	7mer-m8	52350802	52350823	148	-19.84
CAediting_64421	chr1_52350940_-	ENSG00000154222.13	ENST00000371586	hsa-miR-193b-5p	52350936	52350942	7mer-m8	52350935	52350956	142	-20.42
CAediting_64422	chr1_52350941_-	ENSG00000154222.13	ENST00000371586	hsa-miR-193b-5p	52350936	52350942	7mer-m8	52350935	52350956	142	-20.42
CAediting_64383	chr1_52350762_-	ENSG00000154222.13	ENST00000371586	hsa-miR-2052	52350758	52350765	8mer-1a	52350758	52350778	150	-12.77
CAediting_64475	chr1_52351858_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3064-5p	52351857	52351863	7mer-m8	52351856	52351874	148	-18.45
CAediting_64476	chr1_52351862_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3064-5p	52351857	52351863	7mer-m8	52351856	52351874	148	-18.45
CAediting_64475	chr1_52351858_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3085-3p	52351857	52351863	7mer-m8	52351856	52351876	146	-16.44
CAediting_64476	chr1_52351862_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3085-3p	52351857	52351863	7mer-m8	52351856	52351876	146	-16.44
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-30b-3p	52351642	52351649	8mer-1a	52351642	52351663	155	-16.01
CAediting_64471	chr1_52351832_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3160-3p	52351828	52351834	7mer-m8	52351827	52351848	153	-19.95
CAediting_64471	chr1_52351832_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3160-3p	52351828	52351834	7mer-m8	52351827	52351848	153	-19.95
CAediting_64474	chr1_52351846_-	ENSG00000154222.13	ENST00000371586	hsa-miR-324-3p	52351842	52351848	7mer-m8	52351841	52351867	152	-31.03
CAediting_64405	chr1_52350871_-	ENSG00000154222.13	ENST00000371586	hsa-miR-325	52350870	52350876	7mer-m8	52350869	52350891	147	-17.85
CAediting_64406	chr1_52350874_-	ENSG00000154222.13	ENST00000371586	hsa-miR-325	52350870	52350876	7mer-m8	52350869	52350891	147	-17.85
CAediting_64454	chr1_52351716_-	ENSG00000154222.13	ENST00000371586	hsa-miR-340-3p	52351711	52351717	7mer-m8	52351710	52351731	149	-16.52
CAediting_64427	chr1_52350960_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3663-5p	52350959	52350965	7mer-m8	52350958	52350978	140	-18.22
CAediting_64428	chr1_52350963_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3663-5p	52350959	52350965	7mer-m8	52350958	52350978	140	-18.22
CAediting_64469	chr1_52351808_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3689a-3p	52351808	52351814	7mer-m8	52351807	52351828	152	-23.7
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3689a-3p	52351642	52351649	8mer-1a	52351642	52351663	149	-22.05
CAediting_64469	chr1_52351808_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3689b-3p	52351808	52351814	7mer-m8	52351807	52351827	154	-26.92
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3689b-3p	52351642	52351649	8mer-1a	52351642	52351663	149	-22.1
CAediting_64469	chr1_52351808_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3689c	52351808	52351814	7mer-m8	52351807	52351827	154	-26.92
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-3689c	52351642	52351649	8mer-1a	52351642	52351663	149	-22.1
CAediting_64479	chr1_52351882_-	ENSG00000154222.13	ENST00000371586	hsa-miR-371b-5p	52351880	52351887	8mer-1a	52351880	52351901	146	-7.79
CAediting_64479	chr1_52351882_-	ENSG00000154222.13	ENST00000371586	hsa-miR-373-5p	52351880	52351887	8mer-1a	52351880	52351901	142	-8.35
CAediting_64474	chr1_52351846_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4252	52351840	52351847	8mer-1a	52351840	52351860	149	-22.82
CAediting_64443	chr1_52351620_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4284	52351616	52351623	8mer-1a	52351616	52351633	151	-19.56
CAediting_64391	chr1_52350818_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4284	52350815	52350821	7mer-m8	52350814	52350831	151	-16.78
CAediting_64453	chr1_52351692_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4293	52351688	52351694	7mer-m8	52351687	52351703	146	-21.19
CAediting_64384	chr1_52350773_-	ENSG00000154222.13	ENST00000371586	hsa-miR-431-5p	52350772	52350778	7mer-m8	52350771	52350792	143	-16.94
CAediting_64385	chr1_52350775_-	ENSG00000154222.13	ENST00000371586	hsa-miR-431-5p	52350772	52350778	7mer-m8	52350771	52350792	143	-16.94
CAediting_64426	chr1_52350951_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4435	52350950	52350957	8mer-1a	52350950	52350970	146	-17.77
CAediting_64426	chr1_52350951_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4435	52350950	52350957	8mer-1a	52350950	52350970	146	-17.77
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4437	52350838	52350845	8mer-1a	52350838	52350858	153	-22.23
CAediting_64441	chr1_52351611_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4466	52351609	52351615	7mer-m8	52351608	52351625	140	-23.56
CAediting_64449	chr1_52351651_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4478	52351647	52351653	7mer-m8	52351646	52351662	154	-23.41
CAediting_64466	chr1_52351784_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4499	52351780	52351786	7mer-m8	52351779	52351797	150	-19.98
CAediting_64466	chr1_52351784_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4513	52351781	52351787	7mer-m8	52351780	52351800	155	-23.21
CAediting_64397	chr1_52350838_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4674	52350838	52350844	7mer-m8	52350837	52350859	153	-27.52
CAediting_64398	chr1_52350843_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4674	52350838	52350844	7mer-m8	52350837	52350859	153	-27.52
CAediting_64454	chr1_52351716_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4684-5p	52351714	52351720	7mer-m8	52351713	52351734	151	-12.03
CAediting_64455	chr1_52351718_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4684-5p	52351714	52351720	7mer-m8	52351713	52351734	151	-12.03
CAediting_64424	chr1_52350948_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4716-5p	52350945	52350951	7mer-m8	52350944	52350965	140	-11.3
CAediting_64425	chr1_52350950_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4716-5p	52350945	52350951	7mer-m8	52350944	52350965	140	-11.3
CAediting_64437	chr1_52351014_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4769-5p	52351013	52351019	7mer-m8	52351012	52351035	140	-26.5
CAediting_64392	chr1_52350822_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4772-3p	52350821	52350827	7mer-m8	52350820	52350842	154	-19.41
CAediting_64424	chr1_52350948_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4781-3p	52350947	52350953	7mer-m8	52350946	52350964	144	-13.86
CAediting_64425	chr1_52350950_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4781-3p	52350947	52350953	7mer-m8	52350946	52350964	144	-13.86
CAediting_64426	chr1_52350951_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4781-3p	52350947	52350953	7mer-m8	52350946	52350964	144	-13.86
CAediting_64449	chr1_52351651_-	ENSG00000154222.13	ENST00000371586	hsa-miR-485-5p	52351646	52351652	7mer-m8	52351645	52351666	149	-16.76
CAediting_64469	chr1_52351808_-	ENSG00000154222.13	ENST00000371586	hsa-miR-490-3p	52351804	52351810	7mer-m8	52351803	52351825	146	-16.28
CAediting_64384	chr1_52350773_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5007-5p	52350769	52350775	7mer-m8	52350768	52350789	152	-17
CAediting_64437	chr1_52351014_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5089-5p	52351014	52351020	7mer-m8	52351013	52351035	148	-17.52
CAediting_64438	chr1_52351019_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5089-5p	52351014	52351020	7mer-m8	52351013	52351035	148	-17.52
CAediting_64407	chr1_52350878_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5089-5p	52350878	52350884	7mer-m8	52350877	52350897	144	-13.27
CAediting_64408	chr1_52350883_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5089-5p	52350878	52350884	7mer-m8	52350877	52350897	144	-13.27
CAediting_64478	chr1_52351880_-	ENSG00000154222.13	ENST00000371586	hsa-miR-514b-5p	52351880	52351885	6mer	52351879	52351900	146	-12.74
CAediting_64479	chr1_52351882_-	ENSG00000154222.13	ENST00000371586	hsa-miR-514b-5p	52351880	52351885	6mer	52351879	52351900	146	-12.74
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-516a-3p	52350831	52350838	8mer-1a	52350831	52350851	147	-22.6
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-516a-3p	52350831	52350838	8mer-1a	52350831	52350851	147	-22.6
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-516a-3p	52350831	52350838	8mer-1a	52350831	52350851	147	-22.6
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-516a-3p	52350831	52350838	8mer-1a	52350831	52350851	147	-22.6
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-516b-3p	52350831	52350838	8mer-1a	52350831	52350851	147	-22.6
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-516b-3p	52350831	52350838	8mer-1a	52350831	52350851	147	-22.6
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-516b-3p	52350831	52350838	8mer-1a	52350831	52350851	147	-22.6
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-516b-3p	52350831	52350838	8mer-1a	52350831	52350851	147	-22.6
CAediting_64459	chr1_52351740_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5189-5p	52351739	52351745	7mer-m8	52351738	52351763	153	-22.55
CAediting_64461	chr1_52351756_-	ENSG00000154222.13	ENST00000371586	hsa-miR-550a-3-5p	52351755	52351761	7mer-m8	52351754	52351773	140	-14.45
CAediting_64462	chr1_52351760_-	ENSG00000154222.13	ENST00000371586	hsa-miR-550a-3-5p	52351755	52351761	7mer-m8	52351754	52351773	140	-14.45
CAediting_64461	chr1_52351756_-	ENSG00000154222.13	ENST00000371586	hsa-miR-550a-5p	52351755	52351761	7mer-m8	52351754	52351776	140	-18.24
CAediting_64462	chr1_52351760_-	ENSG00000154222.13	ENST00000371586	hsa-miR-550a-5p	52351755	52351761	7mer-m8	52351754	52351776	140	-18.24
CAediting_64461	chr1_52351756_-	ENSG00000154222.13	ENST00000371586	hsa-miR-550a-5p	52351755	52351761	7mer-m8	52351754	52351776	140	-18.24
CAediting_64462	chr1_52351760_-	ENSG00000154222.13	ENST00000371586	hsa-miR-550a-5p	52351755	52351761	7mer-m8	52351754	52351776	140	-18.24
CAediting_64464	chr1_52351772_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5690	52351768	52351774	7mer-m8	52351767	52351787	145	-17.67
CAediting_64386	chr1_52350779_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5691	52350775	52350782	8mer-1a	52350775	52350795	147	-19.61
CAediting_64387	chr1_52350781_-	ENSG00000154222.13	ENST00000371586	hsa-miR-5691	52350775	52350782	8mer-1a	52350775	52350795	147	-19.61
CAediting_64454	chr1_52351716_-	ENSG00000154222.13	ENST00000371586	hsa-miR-593-3p	52351713	52351718	6mer	52351712	52351730	140	-18.96
CAediting_64455	chr1_52351718_-	ENSG00000154222.13	ENST00000371586	hsa-miR-593-3p	52351713	52351718	6mer	52351712	52351730	140	-18.96
CAediting_64459	chr1_52351740_-	ENSG00000154222.13	ENST00000371586	hsa-miR-612	52351739	52351745	7mer-m8	52351738	52351761	149	-22.96
CAediting_64427	chr1_52350960_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6131	52350958	52350964	7mer-m8	52350957	52350975	140	-17.95
CAediting_64428	chr1_52350963_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6131	52350958	52350964	7mer-m8	52350957	52350975	140	-17.95
CAediting_64450	chr1_52351656_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6134	52351651	52351658	8mer-1a	52351651	52351669	154	-20.3
CAediting_64479	chr1_52351882_-	ENSG00000154222.13	ENST00000371586	hsa-miR-616-5p	52351880	52351887	8mer-1a	52351880	52351901	140	-5.71
CAediting_64438	chr1_52351019_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6504-3p	52351018	52351024	7mer-m8	52351017	52351038	152	-15.11
CAediting_64439	chr1_52351020_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6504-3p	52351018	52351024	7mer-m8	52351017	52351038	152	-15.11
CAediting_64408	chr1_52350883_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6504-3p	52350882	52350888	7mer-m8	52350881	52350902	148	-14.63
CAediting_64409	chr1_52350884_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6504-3p	52350882	52350888	7mer-m8	52350881	52350902	148	-14.63
CAediting_64475	chr1_52351858_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6504-5p	52351857	52351863	7mer-m8	52351856	52351875	143	-19.68
CAediting_64476	chr1_52351862_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6504-5p	52351857	52351863	7mer-m8	52351856	52351875	143	-19.68
CAediting_64407	chr1_52350878_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6506-5p	52350877	52350883	7mer-m8	52350876	52350898	144	-18.05
CAediting_64393	chr1_52350829_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6728-3p	52350828	52350834	7mer-m8	52350827	52350849	151	-18.55
CAediting_64394	chr1_52350831_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6728-3p	52350828	52350834	7mer-m8	52350827	52350849	151	-18.55
CAediting_64466	chr1_52351784_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6730-3p	52351783	52351789	7mer-m8	52351782	52351803	140	-12.33
CAediting_64460	chr1_52351752_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6741-5p	52351752	52351758	7mer-m8	52351751	52351772	150	-25.75
CAediting_64461	chr1_52351756_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6741-5p	52351752	52351758	7mer-m8	52351751	52351772	150	-25.75
CAediting_64433	chr1_52350993_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6747-3p	52350991	52350997	7mer-m8	52350990	52351011	148	-20.11
CAediting_64460	chr1_52351752_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6748-5p	52351751	52351757	7mer-m8	52351750	52351771	140	-17.76
CAediting_64461	chr1_52351756_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6748-5p	52351751	52351757	7mer-m8	52351750	52351771	140	-17.76
CAediting_64450	chr1_52351656_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6748-5p	52351655	52351661	7mer-m8	52351654	52351679	154	-23.43
CAediting_64441	chr1_52351611_-	ENSG00000154222.13	ENST00000371586	hsa-miR-675-5p	52351609	52351615	7mer-m8	52351608	52351627	152	-24.92
CAediting_64460	chr1_52351752_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6769a-5p	52351749	52351756	8mer-1a	52351749	52351769	140	-19.77
CAediting_64450	chr1_52351656_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6769a-5p	52351654	52351660	7mer-m8	52351653	52351675	142	-22.09
CAediting_64460	chr1_52351752_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6769b-5p	52351749	52351756	8mer-1a	52351749	52351771	145	-22.59
CAediting_64404	chr1_52350867_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6778-3p	52350864	52350870	7mer-m8	52350863	52350883	146	-17.46
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6779-5p	52351642	52351649	8mer-1a	52351642	52351660	152	-22.88
CAediting_64469	chr1_52351808_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6780a-5p	52351808	52351814	7mer-m8	52351807	52351829	140	-20.56
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6780a-5p	52351642	52351649	8mer-1a	52351642	52351665	148	-20.23
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6783-3p	52350834	52350841	8mer-1a	52350834	52350855	151	-19.99
CAediting_64397	chr1_52350838_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6783-3p	52350834	52350841	8mer-1a	52350834	52350855	151	-19.99
CAediting_64404	chr1_52350867_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6791-3p	52350864	52350869	6mer	52350863	52350883	146	-21.31
CAediting_64386	chr1_52350779_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6805-3p	52350775	52350782	8mer-1a	52350775	52350797	154	-21.17
CAediting_64387	chr1_52350781_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6805-3p	52350775	52350782	8mer-1a	52350775	52350797	154	-21.17
CAediting_64440	chr1_52351028_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6807-5p	52351028	52351034	7mer-m8	52351027	52351048	147	-19.98
CAediting_64454	chr1_52351716_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6827-3p	52351711	52351717	7mer-m8	52351710	52351730	153	-19.05
CAediting_64475	chr1_52351858_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6842-3p	52351858	52351864	7mer-m8	52351857	52351882	142	-25.15
CAediting_64476	chr1_52351862_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6842-3p	52351858	52351864	7mer-m8	52351857	52351882	142	-25.15
CAediting_64466	chr1_52351784_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6855-3p	52351781	52351787	7mer-m8	52351780	52351801	140	-14.36
CAediting_64476	chr1_52351862_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6868-5p	52351861	52351867	7mer-m8	52351860	52351881	147	-17.95
CAediting_64410	chr1_52350902_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6872-3p	52350899	52350905	7mer-m8	52350898	52350918	141	-14.03
CAediting_64478	chr1_52351880_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6888-3p	52351876	52351882	7mer-m8	52351875	52351895	151	-14.42
CAediting_64439	chr1_52351020_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7151-3p	52351019	52351026	8mer-1a	52351019	52351039	144	-16.51
CAediting_64409	chr1_52350884_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7151-3p	52350883	52350890	8mer-1a	52350883	52350903	140	-17.42
CAediting_64449	chr1_52351651_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7160-5p	52351649	52351655	7mer-m8	52351648	52351670	149	-20.7
CAediting_64449	chr1_52351651_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7162-3p	52351650	52351656	7mer-m8	52351649	52351667	150	-18.37
CAediting_64395	chr1_52350834_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7162-5p	52350831	52350838	8mer-1a	52350831	52350849	146	-18.21
CAediting_64396	chr1_52350835_-	ENSG00000154222.13	ENST00000371586	hsa-miR-7162-5p	52350831	52350838	8mer-1a	52350831	52350849	146	-18.21
CAediting_64475	chr1_52351858_-	ENSG00000154222.13	ENST00000371586	hsa-miR-8073	52351856	52351861	6mer	52351855	52351877	140	-28.7
CAediting_64466	chr1_52351784_-	ENSG00000154222.13	ENST00000371586	hsa-miR-873-3p	52351779	52351785	7mer-m8	52351778	52351800	148	-21.99
CAediting_64447	chr1_52351642_-	ENSG00000154222.13	ENST00000371586	hsa-miR-887-5p	52351641	52351648	8mer-1a	52351641	52351660	143	-13.53
CAediting_64448	chr1_52351643_-	ENSG00000154222.13	ENST00000371586	hsa-miR-887-5p	52351641	52351648	8mer-1a	52351641	52351660	143	-13.53
CAediting_64466	chr1_52351784_-	ENSG00000154222.13	ENST00000371586	hsa-miR-888-3p	52351782	52351788	7mer-m8	52351781	52351802	145	-18.84
CAediting_64397	chr1_52350838_-	ENSG00000154222.13	ENST00000371586	hsa-miR-939-3p	52350835	52350842	8mer-1a	52350835	52350854	141	-16.32
CAediting_64476	chr1_52351862_-	ENSG00000154222.13	ENST00000371586	hsa-miR-9851-5p	52351860	52351866	7mer-m8	52351859	52351878	148	-17.87

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000154222.13	ENST00000371586	hsa-miR-4477b	52352127	52352133	7mer-m8	52352126	52352150	153	-16.07
CAediting_688081	chr9_63819627_+	ENSG00000154222.13	ENST00000371586	hsa-miR-4477b	52352672	52352678	7mer-m8	52352671	52352692	140	-10.43
CAediting_688081	chr9_63819627_+	ENSG00000154222.13	ENST00000438021	hsa-miR-4477b	52352672	52352678	7mer-m8	52352671	52352692	140	-10.43
CAediting_1229414	chr17_67471546_+	ENSG00000154222.13	ENST00000371586	hsa-miR-548aa	52353066	52353072	7mer-m8	52353065	52353089	145	-9.6
CAediting_1229415	chr17_67471547_+	ENSG00000154222.13	ENST00000371586	hsa-miR-548aa	52352279	52352285	7mer-m8	52352278	52352307	153	-9.48
CAediting_1160181	chr17_7017644_-	ENSG00000154222.13	ENST00000371586	hsa-miR-195-3p	52350732	52350738	7mer-m8	52350731	52350751	152	-20.42
CAediting_1368054	chr19_46709310_-	ENSG00000154222.13	ENST00000371586	hsa-miR-320e	52351341	52351347	7mer-m8	52351340	52351357	150	-18.76
CAediting_1368054	chr19_46709310_-	ENSG00000154222.13	ENST00000371586	hsa-miR-320e	52352725	52352731	7mer-m8	52352724	52352741	157	-23.32
CAediting_86358	chr1_109598906_+	ENSG00000154222.13	ENST00000371586	hsa-miR-197-5p	52351656	52351663	8mer-1a	52351656	52351682	154	-27.41
CAediting_1399425	chr20_1392958_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6869-5p	52353116	52353123	8mer-1a	52353116	52353137	153	-19.75
CAediting_1399425	chr20_1392958_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6869-5p	52352588	52352594	7mer-m8	52352587	52352608	140	-19.89
CAediting_396018	chr5_1062918_-	ENSG00000154222.13	ENST00000371586	hsa-miR-4635	52352125	52352132	8mer-1a	52352125	52352145	140	-13.21
CAediting_1229414	chr17_67471546_+	ENSG00000154222.13	ENST00000438021	hsa-miR-548aa	52353066	52353072	7mer-m8	52353065	52353089	145	-9.6
CAediting_1368054	chr19_46709310_-	ENSG00000154222.13	ENST00000438021	hsa-miR-320e	52352725	52352731	7mer-m8	52352724	52352741	157	-23.32
CAediting_1399425	chr20_1392958_-	ENSG00000154222.13	ENST00000438021	hsa-miR-6869-5p	52353116	52353123	8mer-1a	52353116	52353137	153	-19.75
CAediting_1399425	chr20_1392958_-	ENSG00000154222.13	ENST00000438021	hsa-miR-6869-5p	52352588	52352594	7mer-m8	52352587	52352608	140	-19.89

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1285-5p	52351555	52351561	7mer-m8	52351554	52351575	154	-15.02
CAediting_573000	chr7_92204081_-	ENSG00000154222.13	ENST00000371586	hsa-miR-1285-5p	52351555	52351561	7mer-m8	52351554	52351575	154	-15.02
CAediting_1368054	chr19_46709310_-	ENSG00000154222.13	ENST00000371586	hsa-miR-320e	52351083	52351089	7mer-m8	52351082	52351099	146	-17.88
CAediting_1368054	chr19_46709310_-	ENSG00000154222.13	ENST00000371586	hsa-miR-320e	52353161	52353167	7mer-m8	52353160	52353177	145	-17.59
CAediting_414656	chr5_72878640_+	ENSG00000154222.13	ENST00000371586	hsa-miR-4804-3p	52353095	52353102	8mer-1a	52353095	52353115	140	-9.21
CAediting_1399425	chr20_1392958_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6869-5p	52353468	52353474	7mer-1a	52353456	52353477	145	-14.16
CAediting_1399425	chr20_1392958_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6869-5p	52353468	52353474	7mer-1a	52353468	52353489	140	-18.27
CAediting_1399425	chr20_1392958_-	ENSG00000154222.13	ENST00000371586	hsa-miR-6869-5p	52353456	52353463	8mer-1a	52353456	52353477	145	-14.16

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CC2D1B

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000371586.5	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_64383	ENST00000371586.5	chr1_52350762_-	-2289.30	-2289.20	-2357.30
CAediting_64384	ENST00000371586.5	chr1_52350773_-	-2289.50	-2289.20	-2357.30
CAediting_64385	ENST00000371586.5	chr1_52350775_-	-2290.20	-2289.20	-2357.30
CAediting_64386	ENST00000371586.5	chr1_52350779_-	-2288.30	-2289.20	-2357.30
CAediting_64387	ENST00000371586.5	chr1_52350781_-	-2288.50	-2289.20	-2357.30
CAediting_64388	ENST00000371586.5	chr1_52350783_-	-2296.40	-2289.20	-2357.30
CAediting_64389	ENST00000371586.5	chr1_52350806_-	-2295.90	-2289.20	-2357.30
CAediting_64390	ENST00000371586.5	chr1_52350811_-	-2288.60	-2289.20	-2357.30
CAediting_64391	ENST00000371586.5	chr1_52350818_-	-2288.30	-2289.20	-2357.30
CAediting_64392	ENST00000371586.5	chr1_52350822_-	-2288.50	-2289.20	-2357.30
CAediting_64393	ENST00000371586.5	chr1_52350829_-	-2296.10	-2289.20	-2357.30
CAediting_64394	ENST00000371586.5	chr1_52350831_-	-2293.90	-2289.20	-2357.30
CAediting_64395	ENST00000371586.5	chr1_52350834_-	-2295.80	-2289.20	-2357.30
CAediting_64396	ENST00000371586.5	chr1_52350835_-	-2293.00	-2289.20	-2357.30
CAediting_64397	ENST00000371586.5	chr1_52350838_-	-2293.10	-2289.20	-2357.30
CAediting_64398	ENST00000371586.5	chr1_52350843_-	-2288.20	-2289.20	-2357.30
CAediting_64399	ENST00000371586.5	chr1_52350851_-	-2289.20	-2289.20	-2357.30
CAediting_64400	ENST00000371586.5	chr1_52350855_-	-2290.70	-2289.20	-2357.30
CAediting_64401	ENST00000371586.5	chr1_52350857_-	-2288.50	-2289.20	-2357.30
CAediting_64402	ENST00000371586.5	chr1_52350859_-	-2289.50	-2289.20	-2357.30
CAediting_64403	ENST00000371586.5	chr1_52350861_-	-2288.30	-2289.20	-2357.30
CAediting_64404	ENST00000371586.5	chr1_52350867_-	-2288.30	-2289.20	-2357.30
CAediting_64405	ENST00000371586.5	chr1_52350871_-	-2291.80	-2289.20	-2357.30
CAediting_64406	ENST00000371586.5	chr1_52350874_-	-2289.20	-2289.20	-2357.30
CAediting_64407	ENST00000371586.5	chr1_52350878_-	-2288.50	-2289.20	-2357.30
CAediting_64408	ENST00000371586.5	chr1_52350883_-	-2289.20	-2289.20	-2357.30
CAediting_64409	ENST00000371586.5	chr1_52350884_-	-2289.30	-2289.20	-2357.30
CAediting_64410	ENST00000371586.5	chr1_52350902_-	-2288.80	-2289.20	-2357.30
CAediting_64411	ENST00000371586.5	chr1_52350910_-	-2288.90	-2289.20	-2357.30
CAediting_64412	ENST00000371586.5	chr1_52350913_-	-2289.20	-2289.20	-2357.30
CAediting_64413	ENST00000371586.5	chr1_52350917_-	-2289.30	-2289.20	-2357.30
CAediting_64414	ENST00000371586.5	chr1_52350918_-	-2289.30	-2289.20	-2357.30
CAediting_64415	ENST00000371586.5	chr1_52350920_-	-2289.60	-2289.20	-2357.30
CAediting_64416	ENST00000371586.5	chr1_52350922_-	-2288.90	-2289.20	-2357.30
CAediting_64417	ENST00000371586.5	chr1_52350923_-	-2289.30	-2289.20	-2357.30
CAediting_64418	ENST00000371586.5	chr1_52350924_-	-2289.30	-2289.20	-2357.30
CAediting_64419	ENST00000371586.5	chr1_52350925_-	-2289.30	-2289.20	-2357.30
CAediting_64420	ENST00000371586.5	chr1_52350929_-	-2289.50	-2289.20	-2357.30
CAediting_64421	ENST00000371586.5	chr1_52350940_-	-2289.20	-2289.20	-2357.30
CAediting_64422	ENST00000371586.5	chr1_52350941_-	-2289.30	-2289.20	-2357.30
CAediting_64423	ENST00000371586.5	chr1_52350942_-	-2288.70	-2289.20	-2357.30
CAediting_64424	ENST00000371586.5	chr1_52350948_-	-2288.80	-2289.20	-2357.30
CAediting_64425	ENST00000371586.5	chr1_52350950_-	-2289.20	-2289.20	-2357.30
CAediting_64426	ENST00000371586.5	chr1_52350951_-	-2288.90	-2289.20	-2357.30
CAediting_64427	ENST00000371586.5	chr1_52350960_-	-2288.50	-2289.20	-2357.30
CAediting_64428	ENST00000371586.5	chr1_52350963_-	-2288.60	-2289.20	-2357.30
CAediting_64429	ENST00000371586.5	chr1_52350966_-	-2295.20	-2289.20	-2357.30
CAediting_64430	ENST00000371586.5	chr1_52350970_-	-2295.40	-2289.20	-2357.30
CAediting_64431	ENST00000371586.5	chr1_52350974_-	-2288.50	-2289.20	-2357.30
CAediting_64432	ENST00000371586.5	chr1_52350979_-	-2288.30	-2289.20	-2357.30
CAediting_64433	ENST00000371586.5	chr1_52350993_-	-2293.90	-2289.20	-2357.30
CAediting_64434	ENST00000371586.5	chr1_52351002_-	-2295.40	-2289.20	-2357.30
CAediting_64435	ENST00000371586.5	chr1_52351003_-	-2291.40	-2289.20	-2357.30
CAediting_64436	ENST00000371586.5	chr1_52351004_-	-2295.70	-2289.20	-2357.30
CAediting_64437	ENST00000371586.5	chr1_52351014_-	-2288.50	-2289.20	-2357.30
CAediting_64438	ENST00000371586.5	chr1_52351019_-	-2289.20	-2289.20	-2357.30
CAediting_64439	ENST00000371586.5	chr1_52351020_-	-2289.30	-2289.20	-2357.30
CAediting_64440	ENST00000371586.5	chr1_52351028_-	-2288.80	-2289.20	-2357.30
CAediting_64441	ENST00000371586.5	chr1_52351611_-	-2290.20	-2289.20	-2357.30
CAediting_64442	ENST00000371586.5	chr1_52351616_-	-2288.80	-2289.20	-2357.30
CAediting_64443	ENST00000371586.5	chr1_52351620_-	-2288.30	-2289.20	-2357.30
CAediting_64444	ENST00000371586.5	chr1_52351627_-	-2288.50	-2289.20	-2357.30
CAediting_64445	ENST00000371586.5	chr1_52351629_-	-2289.20	-2289.20	-2357.30
CAediting_64446	ENST00000371586.5	chr1_52351641_-	-2288.90	-2289.20	-2357.30
CAediting_64447	ENST00000371586.5	chr1_52351642_-	-2289.30	-2289.20	-2357.30
CAediting_64448	ENST00000371586.5	chr1_52351643_-	-2288.90	-2289.20	-2357.30
CAediting_64449	ENST00000371586.5	chr1_52351651_-	-2288.50	-2289.20	-2357.30
CAediting_64450	ENST00000371586.5	chr1_52351656_-	-2293.10	-2289.20	-2357.30
CAediting_64451	ENST00000371586.5	chr1_52351672_-	-2288.60	-2289.20	-2357.30
CAediting_64452	ENST00000371586.5	chr1_52351679_-	-2288.90	-2289.20	-2357.30
CAediting_64453	ENST00000371586.5	chr1_52351692_-	-2288.50	-2289.20	-2357.30
CAediting_64454	ENST00000371586.5	chr1_52351716_-	-2288.30	-2289.20	-2357.30
CAediting_64455	ENST00000371586.5	chr1_52351718_-	-2295.80	-2289.20	-2357.30
CAediting_64456	ENST00000371586.5	chr1_52351727_-	-2295.40	-2289.20	-2357.30
CAediting_64457	ENST00000371586.5	chr1_52351735_-	-2289.20	-2289.20	-2357.30
CAediting_64458	ENST00000371586.5	chr1_52351736_-	-2289.30	-2289.20	-2357.30
CAediting_64459	ENST00000371586.5	chr1_52351740_-	-2288.50	-2289.20	-2357.30
CAediting_64460	ENST00000371586.5	chr1_52351752_-	-2293.40	-2289.20	-2357.30
CAediting_64461	ENST00000371586.5	chr1_52351756_-	-2294.60	-2289.20	-2357.30
CAediting_64462	ENST00000371586.5	chr1_52351760_-	-2288.50	-2289.20	-2357.30
CAediting_64463	ENST00000371586.5	chr1_52351762_-	-2289.20	-2289.20	-2357.30
CAediting_64464	ENST00000371586.5	chr1_52351772_-	-2288.90	-2289.20	-2357.30
CAediting_64465	ENST00000371586.5	chr1_52351775_-	-2289.20	-2289.20	-2357.30
CAediting_64466	ENST00000371586.5	chr1_52351784_-	-2288.50	-2289.20	-2357.30
CAediting_64467	ENST00000371586.5	chr1_52351801_-	-2288.90	-2289.20	-2357.30
CAediting_64468	ENST00000371586.5	chr1_52351802_-	-2288.90	-2289.20	-2357.30
CAediting_64469	ENST00000371586.5	chr1_52351808_-	-2293.10	-2289.20	-2357.30
CAediting_64470	ENST00000371586.5	chr1_52351821_-	-2289.20	-2289.20	-2357.30
CAediting_64471	ENST00000371586.5	chr1_52351832_-	-2293.10	-2289.20	-2357.30
CAediting_64472	ENST00000371586.5	chr1_52351837_-	-2288.70	-2289.20	-2357.30
CAediting_64473	ENST00000371586.5	chr1_52351840_-	-2286.80	-2289.20	-2357.30
CAediting_64474	ENST00000371586.5	chr1_52351846_-	-2288.50	-2289.20	-2357.30
CAediting_64475	ENST00000371586.5	chr1_52351858_-	-2288.50	-2289.20	-2357.30
CAediting_64476	ENST00000371586.5	chr1_52351862_-	-2293.60	-2289.20	-2357.30
CAediting_64477	ENST00000371586.5	chr1_52351873_-	-2289.40	-2289.20	-2357.30
CAediting_64478	ENST00000371586.5	chr1_52351880_-	-2288.60	-2289.20	-2357.30
CAediting_64479	ENST00000371586.5	chr1_52351882_-	-2288.30	-2289.20	-2357.30

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Relation with ADAR for CC2D1B

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_64394	chr1_52350831_-	.	.	0.0415056540066846	0.212989338491001	.	.
CESC	CAediting_64394	chr1_52350831_-	0.00900777652635596	0.307856021396575	.	.	0.00485512058122901	0.330667403213712
LUAD	CAediting_64394	chr1_52350831_-	0.00136602743290031	0.261691124583877	.	.	.	.
STAD	CAediting_64394	chr1_52350831_-	.	.	0.0149864243885923	0.218917433168755	0.00151480085576201	0.283013570118911
KIRC	CAediting_64394	chr1_52350831_-	.	.	0.0402150901282957	0.144843347905575	.	.
KIRP	CAediting_64394	chr1_52350831_-	.	.	0.000348321196415255	0.311277168177846	.	.
ESCA	CAediting_64394	chr1_52350831_-	0.0130010209954841	0.308921500984132	.	.	.	.
SKCM	CAediting_64394	chr1_52350831_-	.	.	0.00114541272568069	0.2564222762804	.	.
THYM	CAediting_64394	chr1_52350831_-	.	.	6.85579963338334e-08	0.625976645193983	.	.
THCA	CAediting_64395	chr1_52350834_-	0.035994769853403	0.254807131417943	.	.	.	.
KIRP	CAediting_64395	chr1_52350834_-	.	.	4.47355893090291e-06	0.583751553537331	.	.
SKCM	CAediting_64395	chr1_52350834_-	.	.	0.00720852362220756	0.34349891028729	.	.
LGG	CAediting_64397	chr1_52350838_-	0.00413912579104651	0.377399014925974	.	.	.	.
LUAD	CAediting_64397	chr1_52350838_-	0.0111241307040671	0.210290827552669	.	.	.	.
STAD	CAediting_64397	chr1_52350838_-	.	.	.	.	0.0180171844483617	0.244832521065878
KIRP	CAediting_64397	chr1_52350838_-	0.0216110656787277	0.225074507203585	.	.	.	.
SKCM	CAediting_64397	chr1_52350838_-	0.037154665010738	0.164922608053694	.	.	.	.
THYM	CAediting_64397	chr1_52350838_-	0.0331625777862669	0.301812723751469	.	.	.	.
PRAD	CAediting_64398	chr1_52350843_-	.	.	.	.	0.00363401744489164	0.300286021496039
HNSC	CAediting_64398	chr1_52350843_-	0.045051090968964	0.284738218704898	.	.	.	.
THYM	CAediting_64398	chr1_52350843_-	0.0336317295224356	0.298074425420132	.	.	.	.
THCA	CAediting_64399	chr1_52350851_-	.	.	.	.	0.0386709818349564	0.25712278761784
KIRC	CAediting_64399	chr1_52350851_-	.	.	.	.	0.0304625100634823	0.294805386253017
BLCA	CAediting_64408	chr1_52350883_-	0.0240284910720579	0.291117686686499	.	.	.	.
LGG	CAediting_64408	chr1_52350883_-	0.0176144595317861	0.279037059757483	.	.	.	.
THCA	CAediting_64408	chr1_52350883_-	0.0273531965143667	0.167777902788864	.	.	.	.
BLCA	CAediting_64411	chr1_52350910_-	5.75469148211865e-05	0.358674739177571	.	.	.	.
LGG	CAediting_64411	chr1_52350910_-	.	.	0.00122607573522764	0.353040068815418	.	.
PRAD	CAediting_64411	chr1_52350910_-	0.0420156516998555	0.167949682036627	.	.	.	.
THCA	CAediting_64411	chr1_52350910_-	0.000438557059226424	0.193615942878003	.	.	.	.
OV	CAediting_64411	chr1_52350910_-	.	.	.	.	0.0233527196293082	0.258242357232311
SARC	CAediting_64411	chr1_52350910_-	.	.	0.0209110227711318	0.288223017410774	.	.
STAD	CAediting_64429	chr1_52350966_-	.	.	.	.	0.0253029110634093	0.263536640897189
BLCA	CAediting_64434	chr1_52351002_-	.	.	0.00631805937472695	0.282737567368068	.	.
LGG	CAediting_64434	chr1_52351002_-	0.0145261450402842	0.340377235070422	.	.	.	.
LUAD	CAediting_64434	chr1_52351002_-	0.0415455497650015	0.162349884540022	.	.	.	.
SKCM	CAediting_64434	chr1_52351002_-	0.00406444265338388	0.212583385505807	.	.	.	.
THYM	CAediting_64434	chr1_52351002_-	0.0146384837126268	0.299286872619846	.	.	.	.
BLCA	CAediting_64438	chr1_52351019_-	0.0115793757956932	0.230743292887734	0.00146436822954898	0.288479989999414	.	.
CESC	CAediting_64438	chr1_52351019_-	0.0367967291322967	0.179247301569029	.	.	.	.
LUAD	CAediting_64438	chr1_52351019_-	0.0035830537944377	0.199214616919128	.	.	.	.
LUAD	CAediting_64439	chr1_52351020_-	0.00194141809739129	0.202878464027319	.	.	.	.
UCEC	CAediting_64439	chr1_52351020_-	.	.	0.0336996001826147	0.256056160384117	.	.
BRCA	CAediting_64440	chr1_52351028_-	0.00567028308317211	0.245110098531897	.	.	.	.
LUAD	CAediting_64440	chr1_52351028_-	0.0218463052047743	0.226870773576991	.	.	.	.
THCA	CAediting_64440	chr1_52351028_-	0.00106305190596232	0.259651080628647	.	.	.	.
KIRC	CAediting_64440	chr1_52351028_-	0.0288038750042451	0.203059318000712	.	.	.	.
THCA	CAediting_64455	chr1_52351718_-	0.00794054579513601	0.308406124155211	.	.	.	.
THCA	CAediting_64461	chr1_52351756_-	3.56147649810124e-09	0.457342170608497	.	.	.	.
LGG	CAediting_64463	chr1_52351762_-	0.0338159519781907	0.286712936373651	.	.	.	.
LUAD	CAediting_64463	chr1_52351762_-	0.00849060214418142	0.22821775907224	.	.	.	.
GBM	CAediting_64463	chr1_52351762_-	0.00967365429628558	0.337059530950567	.	.	.	.
PRAD	CAediting_64463	chr1_52351762_-	0.038941641336267	0.220544045106153	.	.	.	.
THCA	CAediting_64463	chr1_52351762_-	4.00059812715895e-13	0.408395558782266	.	.	.	.
KIRP	CAediting_64463	chr1_52351762_-	0.00799445929384697	0.276418633575916	.	.	.	.
SKCM	CAediting_64464	chr1_52351772_-	0.012601254194486	0.279527814466159	.	.	.	.
BRCA	CAediting_64467	chr1_52351801_-	0.0121100777749419	0.262016240769194	.	.	.	.
THCA	CAediting_64467	chr1_52351801_-	0.0182545596054446	0.196492092666937	.	.	.	.
BRCA	CAediting_64469	chr1_52351808_-	0.00884270180783697	0.349825431013477	0.0368020907964772	0.282269796451856	.	.
THCA	CAediting_64469	chr1_52351808_-	0.0416388409025611	0.220185632580088	.	.	.	.
THCA	CAediting_64476	chr1_52351862_-	4.96996080911742e-08	0.300780853741304	.	.	.	.

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Relation with cancer stages for CC2D1B

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_64397	chr1_52350838_-	0.0454701711531181	0.218873896867643
BLCA	pathologic_stage	CAediting_64408	chr1_52350883_-	0.0158426807560089	0.31284873279405
BLCA	pathologic_stage	CAediting_64438	chr1_52351019_-	0.0206100305494514	0.212934397047013
ESCA	pathologic_stage	CAediting_64397	chr1_52350838_-	0.0182444643277594	0.326276093761104
HNSC	pathologic_stage	CAediting_64398	chr1_52350843_-	0.00423339582467262	0.422932979472635
KIRC	pathologic_stage	CAediting_64476	chr1_52351862_-	0.0475400174078472	0.170237541371701
KIRP	clinical_stage	CAediting_64438	chr1_52351019_-	0.00528688693956292	0.26659985227304
KIRP	clinical_stage	CAediting_64439	chr1_52351020_-	0.00154613758503112	0.28250434897694
KIRP	clinical_stage	CAediting_64476	chr1_52351862_-	0.0214186965398867	0.315408615989531
KIRP	pathologic_stage	CAediting_64438	chr1_52351019_-	0.00649022123011036	0.225083785605575
KIRP	pathologic_stage	CAediting_64439	chr1_52351020_-	0.0325086479242802	0.167060216808362
KIRP	pathologic_stage	CAediting_64476	chr1_52351862_-	0.02090790071406	0.27965654148083
LUAD	pathologic_stage	CAediting_64398	chr1_52350843_-	0.00477292584061837	0.241516355809336
LUAD	pathologic_stage	CAediting_64411	chr1_52350910_-	0.00714787030684947	0.189662216022463
STAD	pathologic_stage	CAediting_64395	chr1_52350834_-	0.0439969533552009	-0.283250257019521
THCA	pathologic_stage	CAediting_64394	chr1_52350831_-	0.00147828910147336	0.205372809975998
THCA	pathologic_stage	CAediting_64408	chr1_52350883_-	0.0254157248550537	0.170413142967822

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Relation with survival for CC2D1B

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LUAD	CAediting_64411	chr1_52350910_-	0.014693817885719	0.030763	17.7241
STAD	CAediting_64411	chr1_52350910_-	0.0369356075001033	0.013452	0.0247
THCA	CAediting_64438	chr1_52351019_-	0.0332809946955982	0.0172987	1.49415e-10
KIRC	CAediting_64408	chr1_52350883_-	0.00382654728298304	0.005325	16393.3
SKCM	CAediting_64461	chr1_52351756_-	0.0161204875273945	0.027316	0.0379542

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RelatedDrugs for CC2D1B

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CC2D1B

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene